mRNA_P-littoralis_Contig1.442.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1.442.2 vs. uniprot
Match: A0A6H5JXZ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXZ6_9PHAE) HSP 1 Score: 216 bits (550), Expect = 6.560e-65 Identity = 122/237 (51.48%), Postives = 158/237 (66.67%), Query Frame = 3
Query: 3 VRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWRGTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAVSSAIAGMAPLLASMKPDTANGRPQTDDPERQ-------VAEIVLADECMTAHENWSKEPAEEEKKGEEGSVFRKKFMRERIESLEKRM 692
VR+IVD E V+H +PN+I QPNISAEK++KMW+ KAKWN P ANW+ SGNNQPW++FCQGD+D +++G AI+KYPELDQVCN LLPED QREDDGTG G GGAERRA+AKREG RL+ NR G K+ KK R QSVA+AT A+ +A+ + PLL + + R + ++ E + AE L H+ S++ EE++K G R KFM + + LEK M
Sbjct: 100 VRKIVDDEQVSHVNPNIIQQPNISAEKITKMWSAAKAKWNTPIANWKSESGNNQPWLSFCQGDTDTYILGCAIEKYPELDQVCNNLLPEDAQREDDGTGEGDGCTGGAERRAAAKREGARLYEQNRRGTKQ-KKQGRRQSVAEATSVAMKTALLDIEPLLPRGGSEESEWRLKQEEEESKSAVLDTKAAEYALQKAMCADHQKCSEQIVEEKEKKRPGYQTRVKFMEQMVAMLEKEM 335
BLAST of mRNA_P-littoralis_Contig1.442.2 vs. uniprot
Match: A0A6H5JZX9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZX9_9PHAE) HSP 1 Score: 208 bits (530), Expect = 3.490e-60 Identity = 118/237 (49.79%), Postives = 156/237 (65.82%), Query Frame = 3
Query: 3 VRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWRGTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAVSSAIAGMAPLLASMKPDTANGRPQTDDPERQVAEI-------VLADECMTAHENWSKEPAEEEKKGEEGSVFRKKFMRERIESLEKRM 692
VR+IVD E V+H +PN+I QPNISAEK++KMW+ KAKWN P+ANW+ SGNNQPW++FCQGD+D +++G AI+KYPELDQVCN LP D QREDDGTG G GGAERRASAKREG RL NR G K+ KK Q+VA+AT A+ +A+ + PLL+ + + R + ++ E + A + L H+ +S++ EEE + G R KFM + + LEK M
Sbjct: 258 VRKIVDDEQVSHVNPNIIQQPNISAEKITKMWSAAKAKWNTPNANWKSESGNNQPWLSFCQGDTDTYILGCAIEKYPELDQVCNNPLPVDAQREDDGTGEGDGCTGGAERRASAKREGARLDEQNRRGTKQKKKGG-GQNVAEATSVAMKTALLDIEPLLSRGGSEKSEWRLKQEEEESKSAALDTKAAAYALQKAMCADHQKYSEQIVEEEGQKRPGYQTRVKFMEQMVAKLEKEM 493
BLAST of mRNA_P-littoralis_Contig1.442.2 vs. uniprot
Match: A0A6H5KKV3_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKV3_9PHAE) HSP 1 Score: 207 bits (528), Expect = 3.210e-58 Identity = 119/238 (50.00%), Postives = 160/238 (67.23%), Query Frame = 3
Query: 3 VRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWRGTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAVSSAIAGMAPLL----ASMKPDTANGRPQ----TDDPERQVAEIVLADECMTAHENWSKEPAEEEKKGEEGSVFRKKFMRERIESLEKRM 692
VR+IVD + V+H DPN+I QPNISAEKLS+MWA KAKWNQP+ANW+ SGNNQPW++FCQG +D +++G AI+KYPEL+QVCN LLPE QREDDGTG GGA+RRA+AKREG RL+ NR GKK K QSVA+AT A+ +A+ + PLL S K + + + T + + + + + L E +H +SK+ EEEK+ +G R +F+R+ + +EK M
Sbjct: 472 VRKIVDDQQVSHVDPNIIQQPNISAEKLSRMWATAKAKWNQPYANWKSESGNNQPWLSFCQGCTDTYVLGCAIEKYPELNQVCNNLLPEGAQREDDGTGEGIVCTGGADRRAAAKREGARLNEQNRRGKKPKNKGV-GQSVAEATSAAMKTALKDIEPLLEKVGGSEKSEWYKKKEEHACKTAEHDSKASGLALQKEMTESHAEFSKKIVEEEKEKADGYQTRVRFLRKMLAGIEKEM 708
BLAST of mRNA_P-littoralis_Contig1.442.2 vs. uniprot
Match: D7FJ39_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ39_ECTSI) HSP 1 Score: 199 bits (505), Expect = 2.780e-57 Identity = 103/160 (64.38%), Postives = 124/160 (77.50%), Query Frame = 3
Query: 3 VRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWRGTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAVSSAIAGMAPLL 482
VR+IVD E V+H DPN+I QPNISAEKLS+MWA KAKWNQP+A+W+ SGNNQPW++FCQG +D +++G AI+KYPEL+QVCN LLPE QREDDGTG GGA+RRA+AKREG RLH NR GKK+ K QSVA+AT A+ +AI M PLL
Sbjct: 237 VRKIVDDEQVSHVDPNIIQQPNISAEKLSRMWATAKAKWNQPYADWKSESGNNQPWLSFCQGCTDTYVLGCAIEKYPELNQVCNNLLPEGAQREDDGTGEGIVGTGGADRRAAAKREGARLHEQNRRGKKQKNKGV-GQSVAEATSAAMKTAIKDMEPLL 395
BLAST of mRNA_P-littoralis_Contig1.442.2 vs. uniprot
Match: A0A6H5KNY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNY9_9PHAE) HSP 1 Score: 200 bits (509), Expect = 3.650e-57 Identity = 115/226 (50.88%), Postives = 150/226 (66.37%), Query Frame = 3
Query: 3 VRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWRGTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAVSSAIAGMAPLLASMKPDTANGRPQTDDPERQ-------VAEIVLADECMTAHENWSKEPAEEEKKGEEGSVFRKKFM 659
VR VD E+V+H +PN+I QPNISAEK++KMW+ KAKWN P+ANW+ SGNNQPW++FCQGD+D +++G AI+KYPELDQVCN LLPED QREDDGTG G GGAER A+AKREG RL+ NR G + KK R QSVA+AT A+ +A+ + PLL + + R + + E + AE L H+ +S++ EE++K G R KFM
Sbjct: 264 VRISVDDELVSHVNPNIIQQPNISAEKITKMWSAAKAKWNTPNANWKRESGNNQPWLSFCQGDTDTYILGCAIEKYPELDQVCNNLLPEDAQREDDGTGDGNGCTGGAERLAAAKREGARLYEQNRRGTMQKKKGGR-QSVAEATSVAMKTALLEVEPLLPLGGSEKSEWRLKQEVEESKSAALDTKAAEYALQKAMCADHQKYSEQIVEEKEKKRPGYQTRVKFM 488
BLAST of mRNA_P-littoralis_Contig1.442.2 vs. uniprot
Match: A0A6H5KFU0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFU0_9PHAE) HSP 1 Score: 192 bits (489), Expect = 3.420e-53 Identity = 100/160 (62.50%), Postives = 122/160 (76.25%), Query Frame = 3
Query: 3 VRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWRGTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAVSSAIAGMAPLL 482
VR+IVD E V+H +PN+I QPNISAEK++KMW+ KAKWN P+ANW+ SGNNQPW++F QGD+D +++G AI+KYPELDQVCN LP D QREDDGTG G GGAERRASAKREG RL NR G K+ KK QSVA+AT A+ +A+ + PLL
Sbjct: 420 VRKIVDDEQVSHVNPNIIQQPNISAEKITKMWSAAKAKWNTPNANWKSESGNNQPWLSFAQGDTDTYILGCAIEKYPELDQVCNNPLPVDAQREDDGTGEGDGCTGGAERRASAKREGARLDEQNRRGTKQKKKGG-GQSVAEATSVAMKTALLDIEPLL 578
BLAST of mRNA_P-littoralis_Contig1.442.2 vs. uniprot
Match: D7FU69_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU69_ECTSI) HSP 1 Score: 184 bits (467), Expect = 7.620e-51 Identity = 89/130 (68.46%), Postives = 105/130 (80.77%), Query Frame = 3
Query: 3 VRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWRGTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKK 392
VR+IVD E V+H DPN+I QPNISAEKLS+MWA KAKWNQP+ANW+ SGNNQPW++FCQG +D +++G AI+KYPEL+QVCN LLPE QREDD TG GGA+RRA+AKREG RLH NR GKK
Sbjct: 360 VRKIVDDEQVSHVDPNIIQQPNISAEKLSRMWATAKAKWNQPYANWKSESGNNQPWLSFCQGCTDTYVLGCAIEKYPELNQVCNNLLPEGAQREDDWTGEGIVGTGGADRRAAAKREGARLHEQNRRGKK 489
BLAST of mRNA_P-littoralis_Contig1.442.2 vs. uniprot
Match: A0A6H5KNM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNM0_9PHAE) HSP 1 Score: 182 bits (463), Expect = 2.340e-48 Identity = 94/150 (62.67%), Postives = 118/150 (78.67%), Query Frame = 3
Query: 3 VRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWRGT-SGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAV 449
VR+IVD E +H +PN+I QP+I AEK++K W+ KAKWN P+ANW+ + SGNNQPW++FCQGD+D +++G AI+KYPELDQVCN LLPED QREDDGTG G GGAERRA+AKREG RL+ NR G K+ K+ R QSVA+AT A+
Sbjct: 794 VRKIVDDEQASHVNPNIIQQPDIFAEKITKTWSAAKAKWNTPNANWKKSESGNNQPWLSFCQGDTDTYILGCAIEKYPELDQVCNNLLPEDAQREDDGTGEGDGCTGGAERRAAAKREGARLYEQNRRGTKQKKEGGR-QSVAEATSVAM 942
BLAST of mRNA_P-littoralis_Contig1.442.2 vs. uniprot
Match: A0A6H5KQ52_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ52_9PHAE) HSP 1 Score: 169 bits (428), Expect = 1.700e-46 Identity = 102/237 (43.04%), Postives = 138/237 (58.23%), Query Frame = 3
Query: 3 VRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWRGTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAVSSAIAGMAPLLASMKPDTANGRPQTDDPERQ-------VAEIVLADECMTAHENWSKEPAEEEKKGEEGSVFRKKFMRERIESLEKRM 692
VR+IVD E V+H N+I QPNISAEK++ M + KAKWN P+ANW+ GNNQPW++FCQGD+D +++G A++KYPELDQVCN LLPED QREDD TG G + NR G K+ KK R QSVA+AT A+ +A+ + PLL + + R + ++ E + AE L E H+ +S++ EE++ G R KFM + LEK M
Sbjct: 134 VRKIVDDEQVSHVIANIIQQPNISAEKITPMRSAAKAKWNTPNANWKSEPGNNQPWLSFCQGDTDTYILGCAVEKYPELDQVCNNLLPEDAQREDDRTGEGDG--------------WREAYEQNRRGTKQKKKGGR-QSVAEATSVAMKTALLDIEPLLPRGGSEKSEWRLKQEEEESKSAALDTKAAEYALQKEMRADHQKFSEQIVEEKENKRPGDQTRVKFMEQMEAKLEKEM 355
BLAST of mRNA_P-littoralis_Contig1.442.2 vs. uniprot
Match: A0A6H5JSN7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSN7_9PHAE) HSP 1 Score: 168 bits (426), Expect = 4.940e-44 Identity = 100/237 (42.19%), Postives = 138/237 (58.23%), Query Frame = 3
Query: 3 VRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWRGTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAVSSAIAGMAPLLASMKPDTANGRPQTDDPERQVAEI-------VLADECMTAHENWSKEPAEEEKKGEEGSVFRKKFMRERIESLEKRM 692
VR+IVD V+H +PN+I QPN SAEK++ W+ +A WN P+ANW SGNNQPWV+F QGD+D +++G A +KYPELDQVCN LLPED QREDDGTG GGAERR +AKREG RL N +SVA+A A+ +A+ + PLL + + + + + + + A + L H+ +S++ EEE+K G R + + + LEK M
Sbjct: 395 VRKIVDDGQVSHVNPNIIQQPNRSAEKITNTWSAARANWNTPYANWTSESGNNQPWVSFSQGDTDTYILGCAFEKYPELDQVCNNLLPEDAQREDDGTGEGDACTGGAERRTAAKREGARLDEQNXXXXXXXXXXX-GKSVAEAMSVAMKTALLDIEPLLPRGGSEKSERQLKQQEEQSKSAALDTKAAAYALQKAMCADHQKYSEQVVEEEEKKRPGYQARINVVEQMVAKLEKEM 630 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1.442.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1.442.2 >prot_P-littoralis_Contig1.442.2 ID=prot_P-littoralis_Contig1.442.2|Name=mRNA_P-littoralis_Contig1.442.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=227bp MVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWRGTSGNNQPWVNback to top mRNA from alignment at P-littoralis_Contig1:1903810..1905585+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1.442.2 ID=mRNA_P-littoralis_Contig1.442.2|Name=mRNA_P-littoralis_Contig1.442.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=1776bp|location=Sequence derived from alignment at P-littoralis_Contig1:1903810..1905585+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1:1903810..1905585+ >mRNA_P-littoralis_Contig1.442.2 ID=mRNA_P-littoralis_Contig1.442.2|Name=mRNA_P-littoralis_Contig1.442.2|organism=Pylaiella littoralis U1_48|type=CDS|length=681bp|location=Sequence derived from alignment at P-littoralis_Contig1:1903810..1905585+ (Pylaiella littoralis U1_48)back to top |