prot_P-littoralis_Contig1.400.1 (polypeptide) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig1.400.1 vs. uniprot
Match: A0A6H5L429_9PHAE (Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L429_9PHAE) HSP 1 Score: 223 bits (567), Expect = 1.320e-73 Identity = 106/110 (96.36%), Postives = 110/110 (100.00%), Query Frame = 0
Query: 1 MPIILLHDAEGGIVTVELKNGEVCRGLLDEAEDSMNLVLKDCIKTNIRGKTTTLQQLYIRGNQIVFCIVPNMLRNAPMFARIKQWRKYKGHPPVLASEGAKGQRAAIIRK 110
MPIILLHDAEGGI+TVELKNGEVCRG+LDEAEDSMNLVLKDC+KTNIRGKT+TLQQLYIRGNQIVFCIVPNMLRNAPMFARIKQWRKYKGHPPVLASEGAKGQRAAIIRK
Sbjct: 1 MPIILLHDAEGGIITVELKNGEVCRGVLDEAEDSMNLVLKDCVKTNIRGKTSTLQQLYIRGNQIVFCIVPNMLRNAPMFARIKQWRKYKGHPPVLASEGAKGQRAAIIRK 110
BLAST of mRNA_P-littoralis_Contig1.400.1 vs. uniprot
Match: D7FT20_ECTSI (Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT20_ECTSI) HSP 1 Score: 218 bits (554), Expect = 8.580e-71 Identity = 105/110 (95.45%), Postives = 109/110 (99.09%), Query Frame = 0
Query: 1 MPIILLHDAEGGIVTVELKNGEVCRGLLDEAEDSMNLVLKDCIKTNIRGKTTTLQQLYIRGNQIVFCIVPNMLRNAPMFARIKQWRKYKGHPPVLASEGAKGQRAAIIRK 110
MPIILLHDAEGGI+TVELKNGEVCRG+LDEAEDSMNLVLKDC+KTNIRGKT+TLQQLYIRGNQIVFCIVPNMLRNAPMFARIKQ RKYKGHPPVLASEGAKGQRAAIIRK
Sbjct: 1 MPIILLHDAEGGIITVELKNGEVCRGVLDEAEDSMNLVLKDCVKTNIRGKTSTLQQLYIRGNQIVFCIVPNMLRNAPMFARIKQGRKYKGHPPVLASEGAKGQRAAIIRK 110
BLAST of mRNA_P-littoralis_Contig1.400.1 vs. uniprot
Match: A0A835YVP5_9STRA (Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVP5_9STRA) HSP 1 Score: 160 bits (404), Expect = 1.250e-48 Identity = 74/110 (67.27%), Postives = 93/110 (84.55%), Query Frame = 0
Query: 1 MPIILLHDAEGGIVTVELKNGEVCRGLLDEAEDSMNLVLKDCIKTNIRGKTTTLQQLYIRGNQIVFCIVPNMLRNAPMFARIKQWRKYKGHPPVLASEGAKGQRAAIIRK 110
MP+ILLHDAEG + TVE+K+GEV RG+LDEAED+MN+++KD +KT++RGKT+TL ++YIRG+QIV IVP+MLR A MF RI WRKYKG+PP LAS GQRAAI+RK
Sbjct: 11 MPVILLHDAEGAVCTVEVKSGEVYRGILDEAEDNMNILMKDILKTDVRGKTSTLSKMYIRGSQIVLVIVPDMLRRAAMFKRIVMWRKYKGNPPSLASSANTGQRAAILRK 120
BLAST of mRNA_P-littoralis_Contig1.400.1 vs. uniprot
Match: A0A6U1QDM6_9STRA (Small nuclear ribonucleoprotein Sm D3 (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1QDM6_9STRA) HSP 1 Score: 144 bits (363), Expect = 2.620e-42 Identity = 70/110 (63.64%), Postives = 84/110 (76.36%), Query Frame = 0
Query: 1 MPIILLHDAEGGIVTVELKNGEVCRGLLDEAEDSMNLVLKDCIKTNIRGKTTTLQQLYIRGNQIVFCIVPNMLRNAPMFARIKQWRKYKGHPPVLASEGAKGQRAAIIRK 110
+PII+LHDAEG IVTVELKNGE RGLLDEAED+MN +L D KT GK + + QLY+RG+QI F +VP+ L+ PMF RI+ WRKYKG+PP L S +GQ AAIIRK
Sbjct: 11 IPIIMLHDAEGCIVTVELKNGETYRGLLDEAEDNMNCILVDVTKTTPMGKISKVDQLYVRGSQISFVVVPDTLQKGPMFKRIQMWRKYKGNPPSLGSVVPRGQAAAIIRK 120
BLAST of mRNA_P-littoralis_Contig1.400.1 vs. uniprot
Match: I2CSB6_NANGC (Small nuclear ribonucleoprotein Sm D3 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CSB6_NANGC) HSP 1 Score: 138 bits (347), Expect = 6.900e-40 Identity = 64/110 (58.18%), Postives = 87/110 (79.09%), Query Frame = 0
Query: 1 MPIILLHDAEGGIVTVELKNGEVCRGLLDEAEDSMNLVLKDCIKTNIRGKTTTLQQLYIRGNQIVFCIVPNMLRNAPMFARIKQWRKYKGHPPVLASEGAKGQRAAIIRK 110
+PIILLHDAEGGI+TVE + GE+ RGLLDEAED+MNL+L+D KTN+ GK + ++ +YI+G+Q+ F I+P+ML+ APMF RIK W+KY G+ P L + G +GQ A I +K
Sbjct: 11 IPIILLHDAEGGIITVETRTGELYRGLLDEAEDNMNLILRDVTKTNVHGKESKVELIYIKGSQVNFMILPDMLKKAPMFKRIKVWKKYHGNVPELGA-GVRGQAAVISQK 119
BLAST of mRNA_P-littoralis_Contig1.400.1 vs. uniprot
Match: A0A7S3K1R1_9STRA (Small nuclear ribonucleoprotein Sm D3 (Fragment) n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K1R1_9STRA) HSP 1 Score: 129 bits (325), Expect = 1.720e-36 Identity = 59/110 (53.64%), Postives = 83/110 (75.45%), Query Frame = 0
Query: 1 MPIILLHDAEGGIVTVELKNGEVCRGLLDEAEDSMNLVLKDCIKTNIRGKTTTLQQLYIRGNQIVFCIVPNMLRNAPMFARIKQWRKYKGHPPVLASEGAKGQRAAIIRK 110
+PIIL+HD EG IVTVE KNG++ RG LDE ED+MN ++KD KT+ GK + ++ ++IRG+QI+F + P ML+ APMF R++ WRK++G+ + E A+GQ AAIIRK
Sbjct: 28 VPIILMHDGEGTIVTVECKNGDMYRGFLDETEDNMNCIMKDVTKTSAEGKKSQIEHIFIRGSQILFFVFPTMLKKAPMFKRVRTWRKHRGN--ISKGEEARGQAAAIIRK 135
BLAST of mRNA_P-littoralis_Contig1.400.1 vs. uniprot
Match: A0A7S4N4C1_9STRA (Small nuclear ribonucleoprotein Sm D3 (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N4C1_9STRA) HSP 1 Score: 127 bits (320), Expect = 8.520e-36 Identity = 63/110 (57.27%), Postives = 80/110 (72.73%), Query Frame = 0
Query: 1 MPIILLHDAEGGIVTVELKNGEVCRGLLDEAEDSMNLVLKDCIKTNIRGKTTTLQQLYIRGNQIVFCIVPNMLRNAPMFARIKQWRKYKGHPPVLASEGAKGQRAAIIRK 110
+PI+LLHDAEGGIVTVE + GE+ RG+L EAED MNL +K+ I + G + Q+Y+RG +IVF ++PNMLR+APMF RIK WRK+ G PP A GQ AAI+RK
Sbjct: 11 IPIVLLHDAEGGIVTVETRKGEIVRGMLFEAEDMMNLYIKNAIVHDENGTKRKVDQMYLRGPEIVFIVLPNMLRHAPMFKRIKHWRKHGGAPPEGVG-AAVGQAAAILRK 119
BLAST of mRNA_P-littoralis_Contig1.400.1 vs. uniprot
Match: F0W7K3_9STRA (Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W7K3_9STRA) HSP 1 Score: 127 bits (318), Expect = 1.770e-35 Identity = 59/115 (51.30%), Postives = 85/115 (73.91%), Query Frame = 0
Query: 1 MPIILLHDAEGGIVTVELKNGEVCRGLLDEAEDSMNLVLKDCIKTNIRGKTTTLQQLYIRGNQIVFCIVPNMLRNAPMFARIKQWRKYKGHPPVLAS-----EGAKGQRAAIIRK 110
+P ILLHD EG V++E+K+GE+ RG L+E ED+MN VLK+ ++T+I G TT ++ +Y+RG+QI+F + P+ML++APMF R+K W+K+KG P L G +GQ AAIIRK
Sbjct: 11 IPTILLHDGEGTTVSIEMKSGEIYRGYLEETEDNMNCVLKEAMRTDINGNTTHVELVYVRGSQILFIVFPDMLKHAPMFKRVKLWKKHKGVIPSLGQGGPGGAGPRGQAAAIIRK 125
BLAST of mRNA_P-littoralis_Contig1.400.1 vs. uniprot
Match: A0A7S4VE27_9STRA (Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VE27_9STRA) HSP 1 Score: 127 bits (320), Expect = 2.910e-35 Identity = 64/110 (58.18%), Postives = 82/110 (74.55%), Query Frame = 0
Query: 1 MPIILLHDAEGGIVTVELKNGEVCRGLLDEAEDSMNLVLKDCIKTNIRGKTTTLQQLYIRGNQIVFCIVPNMLRNAPMFARIKQWRKYKGHPPVLASEGAKGQRAAIIRK 110
+PI+LLHDAEG +V+VE KNGE+ RGLL EAED MNL LK + N +G ++ Q+Y+RG++IVF +P+MLR+APMF RIK WRK+ G PP A A GQ AAI+RK
Sbjct: 11 IPIVLLHDAEGSVVSVETKNGELIRGLLFEAEDMMNLYLKKAVVLNPQGVKRSVDQVYVRGSEIVFISLPDMLRHAPMFQRIKHWRKHGGAPPEGA---AVGQAAAILRK 117
BLAST of mRNA_P-littoralis_Contig1.400.1 vs. uniprot
Match: D0NPB0_PHYIT (Small nuclear ribonucleoprotein Sm D3 n=2 Tax=Peronosporaceae TaxID=4777 RepID=D0NPB0_PHYIT) HSP 1 Score: 126 bits (316), Expect = 4.790e-35 Identity = 61/125 (48.80%), Postives = 86/125 (68.80%), Query Frame = 0
Query: 1 MPIILLHDAEGGIVTVELKNGEVCRGLLDEAEDSMNLVLKDCIKTNIRGKTTTLQQLYIRGNQIVFCIVPNM----------LRNAPMFARIKQWRKYKGHPPVLASEGA-----KGQRAAIIRK 110
+P ILLHD EG IV++E+K GE RGLLDE ED+MN V+KD ++T+I G T+ ++Q+Y+RG+QI+F + P++ L++APMF R+K W+K+KG P L G +GQ AAIIRK
Sbjct: 11 IPTILLHDGEGTIVSIEMKTGETYRGLLDETEDNMNCVMKDAVRTDINGNTSQVEQVYLRGSQILFIVFPDIYPLQPDIAVTLKHAPMFKRVKMWKKHKGSIPTLGQGGVGGGAPRGQAAAIIRK 135 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1.400.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_P-littoralis_Contig1.400.1 ID=prot_P-littoralis_Contig1.400.1|Name=mRNA_P-littoralis_Contig1.400.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=110bpback to top |