prot_P-littoralis_Contig111.80.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig111.80.1
Unique Nameprot_P-littoralis_Contig111.80.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length322
Homology
BLAST of mRNA_P-littoralis_Contig111.80.1 vs. uniprot
Match: A0A6H5KEH2_9PHAE (RNA-directed DNA polymerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEH2_9PHAE)

HSP 1 Score: 462 bits (1188), Expect = 3.430e-146
Identity = 222/322 (68.94%), Postives = 262/322 (81.37%), Query Frame = 0
Query:    1 MVANILALVHVLHGHAGVGPTLALAREKFHWPTQVKDTREYVKAYSCRKRKRSTSRQVAMMPSRSVEPWDRLVIDILAIDTKSESLNKYVLLVVDKATNFPFGFPLPSKQSIGVARKLVELCLTFGVPRMIRCDGGGEFRAEVVTHLCRWLKADIAFGPADHPRSQGSVERLGGWLQELLAELCKAWPHRWSEYVSPALWIKRTLPDQSLPPPLTPFELLFGRPPRTSLDSLVPCPERADERRGLDNFVERRKQNLREVRLVLEKRADLRASSREQVNGTIERSSTGVAVDKGDWVLVREMAATRFRDGRGKKLRHEVYSGP 322
            MVA+I+ALVH LHGHAGVG TL+L R+ FHWPT   DTR YV + +CR+RKR  SR+VAMMP R +EPWD L +DIL IDT S++ N YVLLVVD+A+ FPFGFPL +KQ++GVAR +VELCLT+GVP+ +RCDGG EF AEVV HLCRWL+A I FG ADHPR QG+VERLGGWLQELLAELC+ WP RW EYVSPA+WIKRTLPD SLP  +TPFELLFGR PRTSLDSLVP  +  D+ RGLDNFVERRKQNLREVRL LEKR +LR ++R + N +I+RSS GV V K   VLVRE  + R RD RG+KL+H++Y+GP
Sbjct: 1353 MVADIIALVHTLHGHAGVGATLSLLRDHFHWPTMTNDTRHYVLSCACRRRKRPPSRRVAMMPGRPLEPWDELQMDILKIDTPSQTGNNYVLLVVDRASKFPFGFPLKTKQAVGVARVVVELCLTYGVPKTVRCDGGPEFGAEVVKHLCRWLRASIVFGAADHPRGQGAVERLGGWLQELLAELCRFWPDRWDEYVSPAMWIKRTLPDTSLPSNMTPFELLFGRKPRTSLDSLVPLTDEMDQERGLDNFVERRKQNLREVRLALEKRQELRVAARAKANASIDRSSAGVGVMKESLVLVREFESCRHRDHRGRKLQHDLYTGP 1674          
BLAST of mRNA_P-littoralis_Contig111.80.1 vs. uniprot
Match: A0A6H5JV25_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV25_9PHAE)

HSP 1 Score: 402 bits (1033), Expect = 6.250e-138
Identity = 195/286 (68.18%), Postives = 231/286 (80.77%), Query Frame = 0
Query:   37 DTREYVKAYSCRKRKRSTSRQVAMMPSRSVEPWDRLVIDILAIDTKSESLNKYVLLVVDKATNFPFGFPLPSKQSIGVARKLVELCLTFGVPRMIRCDGGGEFRAEVVTHLCRWLKADIAFGPADHPRSQGSVERLGGWLQELLAELCKAWPHRWSEYVSPALWIKRTLPDQSLPPPLTPFELLFGRPPRTSLDSLVPCPERADERRGLDNFVERRKQNLREVRLVLEKRADLRASSREQVNGTIERSSTGVAVDKGDWVLVREMAATRFRDGRGKKLRHEVYSGP 322
            DTR  V + +CR RKR  SR+VAMM  R +EPWD L +DIL IDT S++ N YVLLVVD+A+ FPFGFPL +KQ++GVAR  VELCLT+GVP+ +RCDGG EF AEVV HLCRWL+A+I FG  DHPR QG+VERLGGWLQELLAELC++WP RW EYVSPA+WIKRTLPD SLP  +TPFELLFGR PRTSLDSLVP  +  D+ RGLDNFVERRKQNLREVRL LEKR +LR ++R + N +IERSS GV V K   VLVRE  ++R RD RG+KL+H++Y+GP
Sbjct:    4 DTRHCVLSCACRTRKRPPSRRVAMMSGRPLEPWDELQMDILKIDTPSQTGNNYVLLVVDRASKFPFGFPLKTKQAVGVARVAVELCLTYGVPKTVRCDGGPEFGAEVVKHLCRWLRANIVFGATDHPRGQGAVERLGGWLQELLAELCRSWPDRWDEYVSPAMWIKRTLPDTSLPSNMTPFELLFGRKPRTSLDSLVPLTDEMDQERGLDNFVERRKQNLREVRLALEKRQELRVAARAKANASIERSSAGVGVMKDSLVLVRESESSRHRDHRGRKLQHDLYTGP 289          
BLAST of mRNA_P-littoralis_Contig111.80.1 vs. uniprot
Match: A0A6H5JMP6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMP6_9PHAE)

HSP 1 Score: 339 bits (870), Expect = 1.580e-106
Identity = 162/253 (64.03%), Postives = 198/253 (78.26%), Query Frame = 0
Query:   70 DRLVIDILAIDTKSESLNKYVLLVVDKATNFPFGFPLPSKQSIGVARKLVELCLTFGVPRMIRCDGGGEFRAEVVTHLCRWLKADIAFGPADHPRSQGSVERLGGWLQELLAELCKAWPHRWSEYVSPALWIKRTLPDQSLPPPLTPFELLFGRPPRTSLDSLVPCPERADERRGLDNFVERRKQNLREVRLVLEKRADLRASSREQVNGTIERSSTGVAVDKGDWVLVREMAATRFRDGRGKKLRHEVYSGP 322
            D L +DI+ ID  S + N Y+LLVVD+A+  PFGFPL +KQ++GVAR LVE CLTFGVP  IRCDGG EF AEVVTHLCRWL+ DI FG ADHPR QGSVERLGGWLQEL A+LC++WP RW  YVSP++WIKRTLPD +LP  + PF+ LF R PRT+LDSLVP  +      GLDNFV+RRKQNLREVR+ LE+R +LR ++R + N TIERSS GVAV +   VLVRE  + R+RD RG++L+H++Y+GP
Sbjct:  418 DELQMDIVKIDLPSLTGNNYILLVVDRASKLPFGFPLETKQAVGVARVLVEQCLTFGVPNTIRCDGGSEFGAEVVTHLCRWLRTDIVFGAADHPRGQGSVERLGGWLQELPAKLCRSWPDRWDGYVSPSIWIKRTLPDTALPSHMIPFKRLFDRKPRTTLDSLVPLTDETGTEGGLDNFVKRRKQNLREVRIALERRHELRVAARAKANATIERSSAGVAVGRNSLVLVRETESRRYRDRRGRELQHDLYTGP 670          
BLAST of mRNA_P-littoralis_Contig111.80.1 vs. uniprot
Match: A0A6H5J7F8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7F8_9PHAE)

HSP 1 Score: 348 bits (893), Expect = 1.860e-106
Identity = 169/274 (61.68%), Postives = 208/274 (75.91%), Query Frame = 0
Query:   49 KRKRSTSRQVAMMPSRSVEPWDRLVIDILAIDTKSESLNKYVLLVVDKATNFPFGFPLPSKQSIGVARKLVELCLTFGVPRMIRCDGGGEFRAEVVTHLCRWLKADIAFGPADHPRSQGSVERLGGWLQELLAELCKAWPHRWSEYVSPALWIKRTLPDQSLPPPLTPFELLFGRPPRTSLDSLVPCPERADERRGLDNFVERRKQNLREVRLVLEKRADLRASSREQVNGTIERSSTGVAVDKGDWVLVREMAATRFRDGRGKKLRHEVYSGP 322
            +RKR  S++VAMMP R +EPW+ L +DIL ID  S + N Y+LLVVD+A+ FPFGFPL +KQ++G AR LVELC TFGVPR I CDGG  F AEVV H CRWL+ADI F  ADHPR QG+VERL  WLQELLAELC++WP RW +Y+ P++WIK TLPD  LP  +TPFELLFGR P T+LDSLVP  +      GLDNFVERRKQNLREVR+VLE+  +LR ++R + N T E+SS GVAV +   VL+RE  + R RD R +KL+H++Y+GP
Sbjct: 1070 RRKRPQSKRVAMMPGRPLEPWNELQMDILKIDKPSLTGNNYILLVVDRASKFPFGFPLETKQAVGAARVLVELCPTFGVPRTIHCDGGSGFGAEVVKHPCRWLRADIVFSGADHPRGQGAVERLREWLQELLAELCRSWPDRWDDYLYPSIWIKLTLPDTVLPSHMTPFELLFGRKPGTTLDSLVPLTDETGAEGGLDNFVERRKQNLREVRMVLERWHELRVAARAKANATFEKSSAGVAVGRNSLVLIRETESRRHRDRRERKLQHDLYTGP 1343          
BLAST of mRNA_P-littoralis_Contig111.80.1 vs. uniprot
Match: A0A6H5K9B2_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9B2_9PHAE)

HSP 1 Score: 301 bits (772), Expect = 2.540e-92
Identity = 140/200 (70.00%), Postives = 165/200 (82.50%), Query Frame = 0
Query:   64 RSVEPWDRLVIDILAIDTKSESLNKYVLLVVDKATNFPFGFPLPSKQSIGVARKLVELCLTFGVPRMIRCDGGGEFRAEVVTHLCRWLKADIAFGPADHPRSQGSVERLGGWLQELLAELCKAWPHRWSEYVSPALWIKRTLPDQSLPPPLTPFELLFGRPPRTSLDSLVPCPERADERRGLDNFVERRKQNLREVRLVL 263
            R +EPWD L +DIL IDT S++ N ++LLVVD+A+ FPFGFPL + Q++GVAR +VELCLT+GVP+ +RCD G EF A +V HLCRWL+A+I FG ADHPR QGSVERLGGWLQELLAELC+ WP RW EYVSPA+WIKRTLPD SLP  +TPFE LFGR PRTSLDSLVP  +  D+ RG+DNFVERRK NLREV LV+
Sbjct:  633 RPLEPWDELHMDILKIDTPSQTSNNHILLVVDRASKFPFGFPLETNQAVGVARVVVELCLTYGVPKTVRCDEGPEFGARLVKHLCRWLRANIVFGAADHPRGQGSVERLGGWLQELLAELCRPWPDRWDEYVSPAMWIKRTLPDTSLPTYMTPFEFLFGRKPRTSLDSLVPLTDEMDQERGVDNFVERRKHNLREVGLVM 832          
BLAST of mRNA_P-littoralis_Contig111.80.1 vs. uniprot
Match: A0A6H5KNP4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNP4_9PHAE)

HSP 1 Score: 303 bits (776), Expect = 8.260e-90
Identity = 153/322 (47.52%), Postives = 209/322 (64.91%), Query Frame = 0
Query:    1 MVANILALVHVLHGHAGVGPTLALAREKFHWPTQVKDTREYVKAYSCRKRKRSTSRQVAMMPSRSVEPWDRLVIDILAIDTKSESLNKYVLLVVDKATNFPFGFPLPSKQSIGVARKLVELCLTFGVPRMIRCDGGGEFRAEVVTHLCRWLKADIAFGPADHPRSQGSVERLGGWLQELLAELCKAWPHRWSEYVSPALWIKRTLPDQSLPPPLTPFELLFGRPPRTSLDSLVPCPERADERRGLDNFVERRKQNLREVRLVLEKRADLRASSREQVNGTIERSSTGVAVDKGDWVLVREMAATRFRDGRGKKLRHEVYSGP 322
            ++  +LAL H    H G   T  +   K+HWP+  KD R YV++  CR +KR  SRQ+ M+P+R + PW  L +DIL   T +   N+Y+L+VVD+AT F FGFPLP+K+++GV+RKL+EL L FG+P  IRCD G E  +E++ HLCRWLK  + FGPA+HPR QG+VER+G  L +LL+ELC+AWP RW EYV+ A W  R  PD+SLP  ++P+++LFGR PRT LD L P  + +    GL++ VE  ++   EV   L KR   +   R+  N  I R+S G     GD VLVRE A+T  RDG   KL H+ ++GP
Sbjct: 1153 LIPGVLALAHGTFAHPGRARTTIIIAGKYHWPSLKKDVRRYVESCRCRMKKRQWSRQLRMLPARFLLPWQVLELDILDTKTVTALGNRYLLVVVDRATKFLFGFPLPTKETVGVSRKLLELILIFGLPLSIRCDPGRENTSEIMEHLCRWLKVSLDFGPANHPRGQGTVERMGAVLAQLLSELCQAWPQRWDEYVAIATWAHRMQPDESLPGNVSPYQMLFGRAPRTPLDQLSPSLDNSGSALGLESSVEETRRKHIEVTDALRKRQAEKNRHRDLQNARISRASPGAKSRVGDKVLVRESASTLHRDGVHPKLAHDHFTGP 1474          
BLAST of mRNA_P-littoralis_Contig111.80.1 vs. uniprot
Match: A0A6H5KZY5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZY5_9PHAE)

HSP 1 Score: 292 bits (748), Expect = 4.810e-86
Identity = 147/277 (53.07%), Postives = 191/277 (68.95%), Query Frame = 0
Query:   47 CRKRKRSTSRQVAMMPSRSVEPWDRLVIDILAIDTKSESLNKYVLLVVDKATNFPFGFPLPSKQSIGVARKLVELCLTFGVPRMIRCDGGGEFRAEVVTHLCRWLKADIAFGPADHPRSQGSVERLGGWLQELLAELCKAWPHRWSEYVSPALWIKRTLPDQSLPPPLTPFELLFGRPPRTSLD-SLVPCPERADERRGLDNFVERRKQNLREVRLVLEKRADLRASSREQVNGTIERSSTGVAVDKGDWVLVREMAATRFRDGRGKKLRHEVYSGP 322
            C +RKR  SR+VAM+  R +EPWD L +DIL IDT S++ N Y+LLVVD+A+ FP GFPL +KQ++GVAR +VELCLT+GVP+ +RCDGG EF AEVV HLCRWL+A+I FG ADHPR QGSVERLGGWLQE+LA+LC++W  RW  +VSPA+WIKRTLPD SLP  +TPFE L G    +    S +     +  R G++                     +LR ++R + N +IERSS GV   K   VLV E  ++R RD RG++L+H++Y+GP
Sbjct: 1402 CDRRKRPLSRRVAMVAGRPLEPWDELQMDILKIDTPSQTGNNYILLVVDRASKFPIGFPLETKQAVGVARVVVELCLTYGVPKTVRCDGGPEFGAEVVKHLCRWLRANIVFGAADHPRGQGSVERLGGWLQEMLAKLCRSWSDRWDVFVSPAMWIKRTLPDTSLPSNMTPFEFLNGDSTASWRGASKISVKYDSPSRNGMN---------------------ELRVAARAKANASIERSSAGVGDVKDSLVLVGESESSRHRDHRGRELQHDLYTGP 1657          
BLAST of mRNA_P-littoralis_Contig111.80.1 vs. uniprot
Match: A0A6H5K3V4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3V4_9PHAE)

HSP 1 Score: 285 bits (729), Expect = 1.820e-83
Identity = 144/322 (44.72%), Postives = 199/322 (61.80%), Query Frame = 0
Query:    1 MVANILALVHVLHGHAGVGPTLALAREKFHWPTQVKDTREYVKAYSCRKRKRSTSRQVAMMPSRSVEPWDRLVIDILAIDTKSESLNKYVLLVVDKATNFPFGFPLPSKQSIGVARKLVELCLTFGVPRMIRCDGGGEFRAEVVTHLCRWLKADIAFGPADHPRSQGSVERLGGWLQELLAELCKAWPHRWSEYVSPALWIKRTLPDQSLPPPLTPFELLFGRPPRTSLDSLVPCPERADERRGLDNFVERRKQNLREVRLVLEKRADLRASSREQVNGTIERSSTGVAVDKGDWVLVREMAATRFRDGRGKKLRHEVYSGP 322
            ++  +LAL H    H G   T  +  +K+HWP+  K  R YV +  CR  KR +S Q+ M+P+R + PWD L +DIL + T + S ++Y+L+ VD+AT F FGFPL +K+ +GV+RKL+ L L FG+P  IRCD G +  +E++ H CRWLK  + FGPA+HPR QG+VER+G  L +LL+ELC+AWP RW EYV+ A W  R   D+SLP   +P ++LFGR PRT LD L P  + +    GL+  VE  +    +V   L KR   +   R   N    R+S G    +GD VLVRE A+T  RDG   KL H+ ++GP
Sbjct: 1699 LIPGVLALAHGTFAHPGSARTTIIIADKYHWPSLKKGVRRYVTSCRCRMSKRPSSAQLRMLPARFLRPWDVLELDILDMKTVANSGSRYLLVGVDRATKFLFGFPLKTKERVGVSRKLLGLLLIFGLPTSIRCDPGRDNTSEIMEHPCRWLKVSLDFGPANHPRGQGTVERMGAVLAQLLSELCQAWPRRWEEYVTVATWTHRMQQDESLPGNASPCQMLFGRSPRTPLDQLAPSLDNSGAALGLEPSVEETRHKHIQVTEALRKRQAEKNRQRNLQNARFSRTSPGAKAKEGDKVLVRESASTLHRDGTHPKLAHDHFTGP 2020          
BLAST of mRNA_P-littoralis_Contig111.80.1 vs. uniprot
Match: A0A6H5KFK7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFK7_9PHAE)

HSP 1 Score: 245 bits (625), Expect = 2.940e-70
Identity = 114/177 (64.41%), Postives = 138/177 (77.97%), Query Frame = 0
Query:    1 MVANILALVHVLHGHAGVGPTLALAREKFHWPTQVKDTREYVKAYSCRKRKRSTSRQVAMMPSRSVEPWDRLVIDILAIDTKSESLNKYVLLVVDKATNFPFGFPLPSKQSIGVARKLVELCLTFGVPRMIRCDGGGEFRAEVVTHLCRWLKADIAFGPADHPRSQGSVERLGGWLQ 177
            MVA+I+ALVH LHGHAGVG TL+L R+ FHWPT   DTR YV + +CR+RKR  SR+VAMMP R +EPWD L +DIL IDT S++ N YV LVVD+A+ FPFGFPL +KQ++GVAR +VELCLT+GVP+ +RCDGG EF AEVV HLCRWL+A I FG ADHPR QG+       +Q
Sbjct:  831 MVADIIALVHTLHGHAGVGATLSLLRDHFHWPTMTNDTRHYVLSCACRRRKRPPSRRVAMMPGRPLEPWDELQMDILKIDTPSQTGNNYVFLVVDRASKFPFGFPLKTKQAVGVARVVVELCLTYGVPKTVRCDGGPEFGAEVVKHLCRWLRASIVFGAADHPRGQGAATEARSLVQ 1007          
BLAST of mRNA_P-littoralis_Contig111.80.1 vs. uniprot
Match: A0A6H5KBF4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBF4_9PHAE)

HSP 1 Score: 231 bits (590), Expect = 4.220e-65
Identity = 116/172 (67.44%), Postives = 137/172 (79.65%), Query Frame = 0
Query:  153 ADIAFGPADHPRSQGSVERLGGWLQELLAELCKAWPHRWSEYVSPALWIKRTLPDQSLPPPLTPFELLFGRPPRTSLDSLVPCPERADE--RRGLDNFVERRKQNLREVRLVLEKRADLRASSREQVNGTIERSSTGVAVDKGDWVLVREMAATRFRDGRGKKLRHEVYSGP 322
            ADIAFG ADH + QGSVERLGGW+QELLAELCK W  RW EYVSPA+WIKRTLPD S+ P +TPFELLFGR PRTSLDSLVP  +  +E    GLDNFVERR QNLREVRLVLEKR DLR ++R + N  I RS+  V V+KG+ V+VRE  ++R RD RG+KL+H++Y+GP
Sbjct:  890 ADIAFGVADHAQGQGSVERLGGWMQELLAELCKCWNDRWDEYVSPAIWIKRTLPDISVHPHMTPFELLFGRKPRTSLDSLVPLSDEGNEDPSGGLDNFVERRNQNLREVRLVLEKRHDLRVAARAKSNANISRSTASVTVEKGNLVMVREADSSRHRDKRGRKLQHDLYTGP 1061          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig111.80.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KEH2_9PHAE3.430e-14668.94RNA-directed DNA polymerase n=1 Tax=Ectocarpus sp.... [more]
A0A6H5JV25_9PHAE6.250e-13868.18Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JMP6_9PHAE1.580e-10664.03Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5J7F8_9PHAE1.860e-10661.68Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5K9B2_9PHAE2.540e-9270.00Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KNP4_9PHAE8.260e-9047.52Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KZY5_9PHAE4.810e-8653.07Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5K3V4_9PHAE1.820e-8344.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KFK7_9PHAE2.940e-7064.41Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KBF4_9PHAE4.220e-6567.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041588Integrase zinc-binding domainPFAMPF17921Integrase_H2C2coord: 3..51
e-value: 3.6E-8
score: 33.3
NoneNo IPR availableGENE3D1.10.340.70coord: 1..50
e-value: 1.3E-6
score: 30.6
NoneNo IPR availablePANTHERPTHR34072:SF9ENZYMATIC POLYPROTEIN-RELATEDcoord: 5..234
NoneNo IPR availablePANTHERPTHR34072ENZYMATIC POLYPROTEIN-RELATEDcoord: 5..234
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 59..267
e-value: 8.8E-36
score: 125.1
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 64..224
score: 17.956173
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 65..220

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig111contigP-littoralis_Contig111:413455..414420 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig111.80.1mRNA_P-littoralis_Contig111.80.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig111 413455..416956 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig111.80.1 ID=prot_P-littoralis_Contig111.80.1|Name=mRNA_P-littoralis_Contig111.80.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=322bp
MVANILALVHVLHGHAGVGPTLALAREKFHWPTQVKDTREYVKAYSCRKR
KRSTSRQVAMMPSRSVEPWDRLVIDILAIDTKSESLNKYVLLVVDKATNF
PFGFPLPSKQSIGVARKLVELCLTFGVPRMIRCDGGGEFRAEVVTHLCRW
LKADIAFGPADHPRSQGSVERLGGWLQELLAELCKAWPHRWSEYVSPALW
IKRTLPDQSLPPPLTPFELLFGRPPRTSLDSLVPCPERADERRGLDNFVE
RRKQNLREVRLVLEKRADLRASSREQVNGTIERSSTGVAVDKGDWVLVRE
MAATRFRDGRGKKLRHEVYSGP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041588Integrase_H2C2
IPR036397RNaseH_sf
IPR001584Integrase_cat-core
IPR012337RNaseH-like_sf