prot_P-littoralis_Contig1106.1.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1106.1.1
Unique Nameprot_P-littoralis_Contig1106.1.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length217
Homology
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BLAST of mRNA_P-littoralis_Contig1106.1.1 vs. uniprot
Match: D7G5U8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5U8_ECTSI)

HSP 1 Score: 94.4 bits (233), Expect = 3.440e-19
Identity = 49/120 (40.83%), Postives = 75/120 (62.50%), Query Frame = 0 
Query:    4 EDWFTFSQHLNALVRKSFTLGLLNDRELLDQLQFRGDDMVEQGGHPAAVLRVFSEMLPNKRHVSRETTFRDRGKLRDINKLHS----ASTAVSGAAHGYPGPSHLAAHHAARVAASSTAP 119
            EDW++F  H++A++ K  TLGL+  R +LD   +RG+DM+ Q G P  V  +F++++PN R++SRETT RDR +L+ I+ +      A+T  +    GY G    AA  A+ +AA  TAP
Sbjct:  199 EDWYSFKPHVDAIIAKGVTLGLMTWRSMLDDFVYRGNDMLLQFGVPEKVFGIFTDLMPNARNISRETTLRDRSRLKAIDTISGGWKLAATLATAHLSGYAGAYQQAASQASTIAAGITAP 318
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1106.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G5U8_ECTSI3.440e-1940.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 92..217

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1106contigP-littoralis_Contig1106:3097..3747 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1106.1.1mRNA_P-littoralis_Contig1106.1.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1106 3097..3748 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1106.1.1 ID=prot_P-littoralis_Contig1106.1.1|Name=mRNA_P-littoralis_Contig1106.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=217bp
SNTEDWFTFSQHLNALVRKSFTLGLLNDRELLDQLQFRGDDMVEQGGHPA
AVLRVFSEMLPNKRHVSRETTFRDRGKLRDINKLHSASTAVSGAAHGYPG
PSHLAAHHAARVAASSTAPQPRSRGSSVRGGGGRYSSAGTSVPLPFTPSV
LPPTATARRPAHQGGSARGNGRGASAPPPPPSNAAAADRKRYTDKLRENQ
QAMTSSPNADRCHNCAD
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