mRNA_P-littoralis_Contig1.378.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1.378.1 vs. uniprot
Match: D8LI37_ECTSI (PA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI37_ECTSI) HSP 1 Score: 367 bits (942), Expect = 5.030e-124 Identity = 179/239 (74.90%), Postives = 202/239 (84.52%), Query Frame = 1
Query: 466 MSGFHPGHKHLRLPNVTDVSVSYAGEAQPPPGEGFDPFEREVHGPTLILDDREGQVRMDSNSSTFEIIDVWTCHYSPQSFRVKAELVVAQPTDARGGLVNGRFVRNRLVMVERGDIPIVHKVLDAQRAGALGVIVADDGRCGNSFGQLCVHGSDPPEGWAALDMPRPWLQVRVPVVLMLREDAERLAVAAGAAAEEVEAMAWSSLYDGWLDSMGSSSSAS---------VGGENWRASA 1155
MSGFH GH+HLRLPNVTDVSV+YAGE +PPPG GFDPFEREVHGPT++LDDR ++R+ SN+S FE IDVWTCH+SP+SF+VK+E+VVAQP DAR L NGRFVRNR+V+V+RGDIPIVHKVL AQRAGALGVIVADDGRCG SFGQLCV+GSDPPEGWAALDMPRPWL VRVPVVLMLREDAERL AAGAAA E+MAW+SLYDGW+DSM S VGG +WR S+
Sbjct: 1 MSGFHAGHEHLRLPNVTDVSVTYAGETEPPPGAGFDPFEREVHGPTVVLDDRASKIRVASNNSAFEDIDVWTCHFSPRSFKVKSEVVVAQPADARSELENGRFVRNRIVVVQRGDIPIVHKVLAAQRAGALGVIVADDGRCGGSFGQLCVYGSDPPEGWAALDMPRPWLDVRVPVVLMLREDAERLTAAAGAAAAHAESMAWTSLYDGWVDSMSSXXXXXXXXXXXXXXVGGGDWRTSS 239
BLAST of mRNA_P-littoralis_Contig1.378.1 vs. uniprot
Match: D8LI38_ECTSI (Fibronectin type-III domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI38_ECTSI) HSP 1 Score: 189 bits (479), Expect = 1.510e-49 Identity = 95/128 (74.22%), Postives = 104/128 (81.25%), Query Frame = 1
Query: 1 RFSVCIVYGETTGPFSEYSKPARTAMVTAPLPVPSAPEGHAGAHSVTLRFLPPHDHGGSPVSWYHVMSRPTGENVLSKWQAVGMAAAPAPKLNVAVHDTEPQSVAVKVEHLVPGVAYQFQVCAQNDIG 384
RFSVC+VYGET GPFSE+SKPART+MVTAPLPVP APEG G H+VTLRFLPP DHG VLSKWQAVGMA APAP+L+V+VHDTEPQSVAVKVEHLVPGVAYQF+VCAQND+G
Sbjct: 705 RFSVCVVYGETAGPFSEFSKPARTSMVTAPLPVPRAPEGSPGTHAVTLRFLPPPDHG-----------------VLSKWQAVGMAPAPAPRLDVSVHDTEPQSVAVKVEHLVPGVAYQFRVCAQNDVG 815
BLAST of mRNA_P-littoralis_Contig1.378.1 vs. uniprot
Match: A0A7S1XPP5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XPP5_9STRA) HSP 1 Score: 168 bits (425), Expect = 4.300e-42 Identity = 129/365 (35.34%), Postives = 179/365 (49.04%), Query Frame = 1
Query: 1 RFSVCIVYGETTGPFSEYSKPARTAMVTAPLPVPSAPEGHA-GAHSVTLRFLPPHDHGGSPVSWYHVMSRPT---GENVLSKWQAVGMAAAPAPKLNVAVHDTEPQSVAVKVEHLVPGVAYQFQVCAQNDIGTSPWSAPSDPVMVL--------AAAVDQ-----TNGNGVSMSGFHPGHKHLRLPNVTDVSVSYAGEAQPPPGEGFDPFEREVHGPTLILDDREGQVRMDSNSSTFEIIDVWTCHYSPQSFRVKAELVVAQPTDA---RGGLVNGRFVRNRLVMVERGDIPIVHKVLDAQRAGALGVIVADDGRCGNSFGQLCVHGSDPP----EGWAALDMPRPWLQVRVPVVLMLREDAERL 1023
FSV + YG+ G SE SK ART V AP P G +HSV L + PP DHGG P + V R ++ +W VG A + V + S+ V+HL+PG YQF+V A N G SPWS + + + A ++D +G+G SG H H + N+T + + A H +L++D +G + + VW +SP SF V+A+L +A+P A GG + V +R+++VERG P+V KVL AQ+AGALGVI+ DDGRC F Q CV GSD +G+AA D P W +VR+P VL+L +D E L
Sbjct: 519 EFSVVLFYGDAKGKASEVSKAARTMPVAAPGRFHKVPVGVVKDSHSVQLYWEPPLDHGGDPNMHFEVERRQQFNRADHADGQWVNVGKVQAFSA---VTEDEALKNSMTTLVDHLLPGSMYQFRVSAVNSEGRSPWSVYTAALETVKAPKFRPGAGSIDSGDAPVLHGHG---SGAHRIHDAHKTGNMTAEATTGAI------------VNLHDHAHSLLVDGGDGGTNLQ--------LAVWAAAWSPASFSVRAQLAMAEPATACRAEGGAGHPSVVHHRVLLVERGGCPLVQKVLTAQKAGALGVIIVDDGRC-EKFDQHCVPGSDKVLSEGQGFAAQDHPGDWRKVRIPAVLVLADDGEVL 856
BLAST of mRNA_P-littoralis_Contig1.378.1 vs. uniprot
Match: A0A7S3UWA2_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWA2_HETAK) HSP 1 Score: 150 bits (379), Expect = 1.070e-38 Identity = 114/314 (36.31%), Postives = 146/314 (46.50%), Query Frame = 1
Query: 148 FLPPHDHGGSPVSWYHVMSRPTGENVLSKWQAVGMAAAPAPKLNVAVHDTEPQSVAVKVEHLVPGVAYQFQVCAQNDIGTSPWSAPSDPVMVLAAAVDQ------TNGNG-VSMSGFHP------------GHKHLRLPNVTDVSVSYAGEAQPPPGEGFDPFEREVHGPTLILDDREGQVRMDSNSSTFEI-IDVWTCHYSPQSFRVKAELVVAQPTDARGGLVNGRFVRNRLVMVERGD-IPIVHKVLDAQRAGALGVIVADDGRCGNSFGQLCVHGSDPP---EGWAALDMPRPWLQVRVPVVLMLREDAE 1017
+ PP D GG P++ YH+M T E+ W+ +G P D + V HL+PG AY F+V A+ G WSAPS P ++ T G G V G+ P HL + +D SY + HGP + L D E ++ + + + WTC +SPQ+F V AE V A P A L N +R RL +V RG +P+V K L AQ AGALGVIV DDGRC +F Q CV G+D E WA D P PW VRVPVVL+L DAE
Sbjct: 8 WFPPEDDGGEPITGYHLMKLHTDEHTHDDWEFLGTF---FPNF-----DPNMGGLCHTVPHLLPGTAYSFKVAARTAAGDGLWSAPSPPARTPLPQLEVDPKGKVTGGTGHVYGRGWDPITHTSFKKDMFEAPLHLET-HSSDKKTSY-----------------DQHGPVVTLHDHEARLEVRRGGGGPAVAVAAWTCAWSPQAFSVTAEAVRADPFLADRPLRNKAVLRKRLALVGRGGGVPLVTKALRAQAAGALGVIVVDDGRC-RAFDQRCVRGADLAARGELWARGDRPGPWRGVRVPVVLVLAGDAE 294
BLAST of mRNA_P-littoralis_Contig1.378.1 vs. uniprot
Match: A0A7S2WLH8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WLH8_9STRA) HSP 1 Score: 156 bits (394), Expect = 2.770e-38 Identity = 116/370 (31.35%), Postives = 180/370 (48.65%), Query Frame = 1
Query: 4 FSVCIVYGETTGPFSEYSKPARTAMVTAPLPVPSAP----------EGHAGAHSVTLRFLPPHDHGGSPVSWYHVMSRPTGENVLSKWQAVGMAAAPAPKLNVAVHD---TEPQSVAVKVEHLVPGVAYQFQVCAQNDIGTSPWSAPSDPVMVLAAAVDQTNGNGVSMSGFHPGHKHLRLPNVTDVSVSYAGEAQPPPGEGFDPFER----EVHGPTLILDDREGQVRMDSNSSTFEIIDVWTCHYSPQSFRVKAELVVAQPT-----------DARGGLVNGRFVRNRLVMVERGDIPIVHKVLDAQRAGALGVIVADDGRCGNSFGQLCVHGSDPP--EGWAALDMPRPWLQVRVPVVLMLREDAERL 1023
F + + YGET+ P S S+ T ++AP + S P +G +++ PP D GG+ V + V R E + W +G P ++ V D TE +A +++HL+P Y+F++ A N IG + AP + V + V SG H+ + L + ++ + ++ E EVHGP + L D V ++ T + VW H+SP++++V AE++V P R L N V++R+ ++ERG +P+VHK AQ AGAL VIV DDG+C F QLC G+D +G+A LD+ PW ++R+PVVLMLR DA++L
Sbjct: 317 FRIMVYYGETSSPSSASSRIVHTPALSAPSRMESPPVLWRRPSKQDKGKLTGTKLSIVASPPVDDGGADVKGFIVQRRHVQEEMHDDWVTLGSF--PIHWVDHVVSDDGATE-HRLAFELDHLLPNCDYEFRIAAYNKIGVA---APGTGSRLRTNPVSRAGEEVVGGSG----HRSMPLHHFRELDEDFHTDSAAEVREHLKALHSSTFFEVHGPVVTLSDLLQTVTLEK-PGTGLTLPVWVSHWSPKAYKVTAEVIVTDPPMGDLSEPNKLPSTRTPLHNAATVQHRIALMERGGVPLVHKAALAQDAGALAVIVTDDGKC-TEFDQLCCPGADKKFGDGFAKLDLAAPWEKIRIPVVLMLRADADKL 674
BLAST of mRNA_P-littoralis_Contig1.378.1 vs. uniprot
Match: A0A836CBI4_9STRA (PA domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBI4_9STRA) HSP 1 Score: 132 bits (333), Expect = 2.950e-33 Identity = 81/198 (40.91%), Postives = 106/198 (53.54%), Query Frame = 1
Query: 466 MSGFHPGHKHLRLPNVTDVSVSYAGEAQPPPGEGFDPFEREVHGPTLILDDREGQVRMDSNSSTFEI------IDVWTCHYSPQSFRVKAELVVAQPTDARGG-LVNGRFVRNRLVMVERGDIPIVHKVLDAQRAGALGVIVADDGRCGNS--FGQLCVHGSDPPEGWAALDMPRPWLQVRVPVVLMLREDAERLAVA 1032
+ G H LP D +V YA P ER GPT+ LD +V + + I + VW H+SP++ V AEL+ A P DA L N FVR R+ +V RG +P+VHKV+ AQRA AL V++ADDG C ++ F Q C+ GS PP+GWA D PW +VR+P VLML+E A L A
Sbjct: 1 VQGIHGNAPLQPLPTPRDPAVRYADFGGAPIVGLHAHAERMARGPTVTLDAARERVHVADDRGPLAIALGGADVPVWAGHFSPRTHLVTAELIPADPPDAAAPELRNASFVRGRIALVTRGAVPLVHKVMAAQRARALAVVIADDGSCTHAGGFSQFCMPGSSPPDGWAREDSEGPWREVRIPHVLMLKEHAAVLLAA 198
BLAST of mRNA_P-littoralis_Contig1.378.1 vs. uniprot
Match: A0A8K1C2W5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C2W5_PYTOL) HSP 1 Score: 139 bits (351), Expect = 2.680e-32 Identity = 118/360 (32.78%), Postives = 172/360 (47.78%), Query Frame = 1
Query: 4 FSVCIVYGETTGPFSEYSKPART---AMVTAPLPVPSAPEGHAGAHSVTLRFLPPHDHGGSPVSWYHVMSRPTGENVLSKWQAVGMAAAPAPKLNVAVH---DTEPQSVAVKVE---HLVPGVAYQFQVCAQNDIGTSPWSAPSDPVMVLAAAVDQTNGN------GVSMSGFHPGHKHL--RLPNVTDVSVSYAGEAQPPPGEGFDPFEREVHGPTLILDDREGQVRMDSNSSTFEIIDVWTCHYSPQSFRVKAELVVAQPTDARGGLVNGRFVRNRLVMVERGDIPIVHKVLDAQRAGALGVIVAD-DGRCGNSFGQLCVHGSDPP--EGWAALDMPRPWLQVRVPVVLMLREDAERL 1023
F + I GE G S+ S+ RT A+ A VP A A + LR+L P D GG ++ Y V R + ++ + + V ++ D QS V +LVPG +Q +V A N IG PWSA SDP L+ + N G+ + + L +L N T V+ A A +G P ++L D + + + + T DVW+ H+SP+ F+V +E+ A P DA LVN V++R+V++ RG++P V KV AQ AGALGVI+ D +G C N F Q CV G+D EG+ D W ++R+P VL L+E + RL
Sbjct: 561 FDLRIWVGEAIGMESDRSRSIRTKPCAVPDAVRGVPYATSTENAATCLKLRWLEPSDDGGRRINAYLVALRELKDPSTDVLESEDPSRTDETEQLVVINATSDVSRQSDVWSVSSVCNLVPGTTFQVRVAAVNIIGVGPWSARSDPA-TLSPYDKSSRLNEIPVLYGIGDPRYSRASRFLTQQLNNATLALVTEAQRASTDTYQGV--------RPRIVLSDIQEKAIVAVGADTELQFDVWSGHFSPRKFQVSSEIARADPFDASSPLVNAADVKDRVVIIARGNVPFVFKVYHAQLAGALGVIIGDFNGTCHNRFDQRCVPGADRTRGEGFGLHDRHVLWQRIRIPFVLALKEASTRL 911
BLAST of mRNA_P-littoralis_Contig1.378.1 vs. uniprot
Match: A0A8J2X4D2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X4D2_9STRA) HSP 1 Score: 137 bits (344), Expect = 1.840e-31 Identity = 114/365 (31.23%), Postives = 159/365 (43.56%), Query Frame = 1
Query: 4 FSVCIVYGETTGPFSEYSKPARTAMVTAPLPVPSAPEGHAGAHSVTLRFLPPHDHGGSPVSWYHVMSRP-TGENVLSKWQAVGMAAAPAPKLNVAVHDTEPQSVAVKVEHLVPGVAYQFQVCAQNDIGTSPWSAPSDPVMVLAAAVDQTNGNGVSMSGFHPG---HKHLRLPNVTDVSVSYAGEAQPPPGEG-----------FDPFEREVHGPTL-----------ILDDREGQVRMDSNSSTFEIIDVWTCHYSPQSFRVKAELVVAQPTDARGGLVNGRFVRNRLVMVERGDIPIVHKVLDAQRAGALGVIVADDGRCGNSFGQLCVHGSDPPEG--WAALDMPRPWLQVRVPVVLMLREDA 1014
F V + YGE GP+S+ S+ A T AP + + G +TL P D GGS + + R EN W+ VG A L + V + + E +Y+F V N +G +PWS P+ P TN ++S H H +P ++ E + E FD VHGP + + D R N+ W CH+SP+ + AELV A P DA N +R R+V+V+RG P+ K L AQRAGALGV++AD+G+C + Q CV G+D G WA LD+ RPW V +PVVL+L + A
Sbjct: 381 FRVRVYYGEVEGPWSKPSEEASTPARGAPSKIVGSSVQALG-RGLTLTVPRPFDDGGSTIKGLVLRFRHHDSENFPGAWRHVGSFATKDWPLQLDVTN----ELLTSREDSSHNHSYEFSVAPYNRLGVAPWSGPTAPCA--------TNNEEKAVSYGHGAFDRHTRHHIPTDDELVQIATEEGKKLYEEASHYVRKHLDDLFDEHAHSVHGPLVSIGGSLTASLDVYDSLHNYRR--PNARPDYSAQAWLCHWSPRGHKAVAELVAADPLDACSTHKNAAPLRGRVVLVKRGQCPLATKALLAQRAGALGVVIADNGKC-TALDQYCVPGADRSRGEAWARLDLQRPWAGVHIPVVLVLADSA 729
BLAST of mRNA_P-littoralis_Contig1.378.1 vs. uniprot
Match: A0A7S3JZQ1_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JZQ1_9STRA) HSP 1 Score: 133 bits (335), Expect = 2.370e-30 Identity = 107/368 (29.08%), Postives = 170/368 (46.20%), Query Frame = 1
Query: 4 FSVCIVYGETTGPFSEYSKPARTAMVTAP--LPVPSAPEGHAGAHSVTLRFLPPHDHGGSPVSWYHVMSRPTGENVL-SKWQAVGMAAAPAPKLNVAVHDTEP---QSVAVKVEHLVPGVAYQFQVCAQNDIGTSPWSAPSDPVMVLAAAVDQTNGNGVSMSGFHPGHKHLRLPNVTDV------------SVSYAGEAQPPPGEGFDPFEREVH-GPTLILDDREGQVRMDSNSSTFEII-------DVWTCHYSPQSFRVKAELVVAQPTDARGGLVNGRFVRNRLVMVERGDIPIVHKVLDAQRAGALGVIVADDGRCGNSFGQLCVHGSDPP--EGWAALDMPRPWLQVRVPVVLMLREDAERL 1023
F I YG+ GP+S +S T + AP + P A + ++ PP+ GG P+ + + R ++ S+W + G A + + +H P Q +K H AY FQ A N +G S WS PS+P+ A +G G + H HL N D ++S E+ +H GP + R+ ++++ S+ + + + W H+SP V AE++ AQP A L + +R+ + RGD+P V K AQR GAL +++ADDGRCG+S Q CV G++ EG+AALD P+ W + +P+VL+L++DA+ +
Sbjct: 332 FRTRIKYGDAYGPWSLWSDGIATRLRGAPRGMSPPHTIRPGVDASILQVQVDPPNIDGGDPIRGFLIRYRHVDTELMRSEWLSAGSFAVNS---IITIHGLLPNHCQEELIKERH-----AYIFQAAAYNRLGLSEWSPPSEPIATACALHTLVHGRGAQRNF---AHHHLHDENEKDPDLWAPARVFVTSAISLLHESH-----------LSLHLGPIATV--RDNKLQIWSHEFYGQPLRPPLYRCEAWFAHWSPPQISVAAEIIRAQPILANAPLQKELY--HRVAIANRGDVPFVVKAKHAQRTGALALVIADDGRCGDSLDQYCVPGAERARGEGFAALDNPKQWSSIHIPIVLILKKDADEV 673
BLAST of mRNA_P-littoralis_Contig1.378.1 vs. uniprot
Match: A0A662X3D5_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X3D5_9STRA) HSP 1 Score: 133 bits (335), Expect = 3.480e-30 Identity = 118/380 (31.05%), Postives = 166/380 (43.68%), Query Frame = 1
Query: 4 FSVCIVYGETTGPFSEYSKPARTAMVTAPLPVPSAPEGH-AGAHSVTLRFLPPHDHGGSPVSWYHVMSRPTGE----NVLSKWQAVGMAAAPAPKLNVAVHDTEPQSVAVKVEH--------------LVPGVAYQFQVCAQNDIGTSPWSAPSDPVMVLAAA---------------VDQTNGNGVSMSGFHPGHKHLRLPNVTDVSVSYAGEAQPPPGEGFDPFEREVHGPTLILDDREGQVRM---DSNSSTFEIIDVWTCHYSPQSFRVKAELVVAQPTDARGGLVNGRFVRNRLVMVERGDIPIVHKVLDAQRAGALGVIVAD-DGRCGNSFGQLCVHGSDPP--EGWAALDMPRPWLQVRVPVVLMLREDAERL 1023
FSV ++ GE G S S+ T+ T P PV PE H A +TLR++ D GG + Y V + E N + ++V A V + + E L PG AY F+V A N +G WS S + + + V G G G + L ++T + S + + P ++L D E QV + D + + + W HYSP+ F V AELV+A P DA L+N VR+R+V+ RG P V K+ AQRAGALG+I+AD +G CG +F Q CV G+D EG+AA D W Q R+P VL+L++ A L
Sbjct: 648 FSVRLLVGEARGAASGPSRLVVTSARTPPSPVRGMPEAHDIQATCLTLRWIDAEDDGGREIELYLVATEELPEKSERNGYNSGRSVEDATIVREHEKVTAFNASKSHGQISAEPSVSGASWKSTQVCGLFPGAAYTFRVAAMNALGAGHWSRRSARIEIPPRSHFFPSADTGRRQKYVVPMLKGMGDPAYTVMSGVEMLSQSDLTSLVTSNPHRILRASSGQIE----DAALPRVVLSDVEEQVALLADDGDVESQRTFEAWAGHYSPRLFDVSAELVLADPPDASRPLLNAHAVRDRVVLAVRGGAPFVFKLHYAQRAGALGLIIADVNGTCGGNFDQSCVPGADKTRNEGFAAQDRHTLWDQTRIPCVLVLQDAALEL 1023 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1.378.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1.378.1 >prot_P-littoralis_Contig1.378.1 ID=prot_P-littoralis_Contig1.378.1|Name=mRNA_P-littoralis_Contig1.378.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=363bp MVTAPLPVPSAPEGHAGAHSVTLRFLPPHDHGGSPVSWYHVMSRPTGENVback to top mRNA from alignment at P-littoralis_Contig1:1628886..1631999- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1.378.1 ID=mRNA_P-littoralis_Contig1.378.1|Name=mRNA_P-littoralis_Contig1.378.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3114bp|location=Sequence derived from alignment at P-littoralis_Contig1:1628886..1631999- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1:1628886..1631999- >mRNA_P-littoralis_Contig1.378.1 ID=mRNA_P-littoralis_Contig1.378.1|Name=mRNA_P-littoralis_Contig1.378.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1089bp|location=Sequence derived from alignment at P-littoralis_Contig1:1628886..1631999- (Pylaiella littoralis U1_48)back to top |