mRNA_P-littoralis_Contig110.75.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig110.75.1
Unique NamemRNA_P-littoralis_Contig110.75.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig110.75.1 vs. uniprot
Match: D8LMG0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMG0_ECTSI)

HSP 1 Score: 408 bits (1048), Expect = 2.660e-137
Identity = 207/220 (94.09%), Postives = 213/220 (96.82%), Query Frame = 2 
Query:  395 MDMEATADQMVTLLSVNPQRVYKTAYYRKQTKNHWARDDPGFAVLQAFFLVVATFAFGVAFGARGVWTYVGLLLHTVGVHWLLCGVVMSSFCRWIANSRLLQHRSHSVEQEVEWMYAWDIHSNSFFPLFVWLYVVQLLLLPLLAGQSVWSLMLSNTLYAVAFSVYFYVTHLGYRSLPFLHTTEVFLYPVVAIIMLLLLSIILLPFGIRVNATLTVAKMYF 1054
            MDMEATADQMVTLLSVNPQRVYKTAYYRKQTKNHWARDDPGFAVLQ FFLVVATFAFGVAFGARGVWTYVGLLLH+VGVHWLLCGVVMSS CRWIANSRLLQHRSHSVEQEVEWMYA DIHSNSFFPLFV LYVVQLLLLPLL GQSVWSL+L+NTLYAVAFSVYFYVTHLGYRSLPFLHTTEVFLYPVV IIMLLLLSIILLPFGIR+NATL +AK+YF
Sbjct:    1 MDMEATADQMVTLLSVNPQRVYKTAYYRKQTKNHWARDDPGFAVLQTFFLVVATFAFGVAFGARGVWTYVGLLLHSVGVHWLLCGVVMSSLCRWIANSRLLQHRSHSVEQEVEWMYALDIHSNSFFPLFVCLYVVQLLLLPLLVGQSVWSLILANTLYAVAFSVYFYVTHLGYRSLPFLHTTEVFLYPVVGIIMLLLLSIILLPFGIRINATLAMAKLYF 220
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BLAST of mRNA_P-littoralis_Contig110.75.1 vs. uniprot
Match: A0A835Z945_9STRA (UNC-50 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z945_9STRA)

HSP 1 Score: 295 bits (754), Expect = 1.510e-92
Identity = 154/262 (58.78%), Postives = 189/262 (72.14%), Query Frame = 2 
Query:  272 MLP-SSVGGRYAPHRHGSSYAHSMSVSWSLPDYLRRMFDYHQMDMEATADQMVTLLSVNPQRVYKTAYYRKQTKNHWARDDPGFAVLQAFFLVVATFAFGVAFGARGVWTYVGLLLHTVGVHWLLCGVVMSSFCRWIANSRLLQHRSHSVEQEVEWMYAWDIHSNSFFPLFVWLYVVQLLLLPLLAGQSVWSLMLSNTLYAVAFSVYFYVTHLGYRSLPFLHTTEVFLYPVVAIIMLLLLSIILLPFGIRVNATLTVAKMYF 1054
            MLP     GRYAPHR  SSY    SV    P+Y  R+FD+ Q+DME+  DQMVTLLS+NP RVYKTAYYRKQTKN WARDDP FAVLQ  F V    A+G+AFG R  W Y+ L+ + V +HWLL GV  ++  R +AN+ +L  R+HSVEQ VEW+YA+DIH N+FF LF+ +YV Q LLLP+L G SV +L+LSN LYA+ F  YFY+THLGYRSLPFL  TE FLYPVVA++ LL  S++L   G+RVN T  +A +YF
Sbjct:    1 MLPLDGRNGRYAPHRRHSSYGGDRSV----PEYFARLFDFKQLDMESACDQMVTLLSLNPGRVYKTAYYRKQTKNQWARDDPAFAVLQLAFSVAGAVAYGMAFGLRAFWGYIALIANAVLLHWLLFGVAAATAGRALANAHMLVRRAHSVEQRVEWLYAFDIHCNAFFMLFIVVYVGQFLLLPVLLGPSVGALLLSNALYALGFGAYFYITHLGYRSLPFLCKTETFLYPVVAVVTLLATSVLLAALGMRVNMTRVMAHVYF 258
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BLAST of mRNA_P-littoralis_Contig110.75.1 vs. uniprot
Match: A0A7R9YBX5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBX5_9STRA)

HSP 1 Score: 240 bits (612), Expect = 1.680e-71
Identity = 124/238 (52.10%), Postives = 168/238 (70.59%), Query Frame = 2 
Query:  317 GSSYAHSMSVSWSLPDYLRRMFDYHQMDMEATADQMVTLLSVNPQRVYKTAYYRKQTKNHWARDDPGFAVLQAFFLVVATFAFGVAFGARGVWTYVGLLLHTVGVHWLLCGVVMSSFCRWIANSRLLQHRSHSVEQEVEWMYAWDIHSNSFFPLFVWLYVVQLLLLPLLAGQSVWSLMLSNTLYAVAFSVYFYVTHLGYRSLPFLHTTEVFLYPVVAIIMLLLLSIILLPFGIRVNAT 1030
            G + A  +S+  S+P+YL R+ D+  MD EAT DQM+TL S +P RVYKT +YRKQ KN WARDDP FAV Q   L V   A+ +AF    +  Y+ L+L+ V V W L G V+++   ++AN  LLQ  SHSV Q+VEW+YA+DIH N+FFPLF+ ++V+Q  LLP+L  +   S++LSN LYA AFSVYFY+THLGYR+LPFL  TEV+LYP+  + +  +LS+ + P G+R+NAT
Sbjct:   14 GYTRATRVSLPASVPEYLCRVLDFRSMDFEATLDQMLTLASSDPGRVYKTNFYRKQMKNQWARDDPAFAVAQVLLLSVVAVAYALAFRVDSLSGYLSLILYCVVVDWFLFGCVVATIGWFVANKYLLQSHSHSVAQKVEWLYAFDIHCNAFFPLFLLVHVLQFFLLPILLLKVYPSMILSNLLYAAAFSVYFYITHLGYRALPFLTKTEVYLYPIGVVALAFVLSLFIAPLGVRINAT 251
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BLAST of mRNA_P-littoralis_Contig110.75.1 vs. uniprot
Match: A0A7S1Y6X4_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y6X4_9STRA)

HSP 1 Score: 236 bits (602), Expect = 3.200e-70
Identity = 126/239 (52.72%), Postives = 166/239 (69.46%), Query Frame = 2 
Query:  338 MSVSWSLPDYLRRMFDYHQMDMEATADQMVTLLSVNPQRVYKTAYYRKQTKNHWARDDPGFAVLQAFFLVVATFAFGVAFGARGVWTYVGLLLHTVGVHWLLCGVVMSSFCRWIANSRLLQHRSHS-VEQEVEWMYAWDIHSNSFFPLFVWLYVVQLLLLPLLAGQSVWSLMLSNTLYAVAFSVYFYVTHLGYRSLPFLHTTEVFLYPVVAIIMLLLLSIILLPFGIRVNATLTVAKMY 1051
            MS       YL R+ D  QMD ++  DQM +LL   P  VYKTAYYRKQTKNHWARDDP F VLQA FL+V+  A+ VAF A  + T++G L+H++  +WL+ G ++ S  R +AN  L  H+S S V Q VEW+YA+DIH N+FFPLF  LY VQ  LLPL+ G S  +L+++NTLYAVAFS Y+Y+THLGYRSLPFL  TEVF++P+ A+I+L +L+++  PF    N     A++Y
Sbjct:    1 MSSKGRPTQYLARLTDVRQMDAQSALDQMKSLLGSRPHTVYKTAYYRKQTKNHWARDDPAFCVLQAIFLLVSVVAYSVAFKAS-IGTFLGFLIHSLFWNWLVSGALVCSILREVANRHLTVHQSTSHVRQSVEWLYAFDIHCNAFFPLFCVLYGVQFFLLPLILGNSFLALVVANTLYAVAFSWYWYITHLGYRSLPFLTNTEVFMFPIAAVILLFVLNLVGYPFNFGWNFARVFAQIY 238
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BLAST of mRNA_P-littoralis_Contig110.75.1 vs. uniprot
Match: A0A7S0G7V0_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0G7V0_9STRA)

HSP 1 Score: 236 bits (603), Expect = 1.150e-69
Identity = 128/252 (50.79%), Postives = 174/252 (69.05%), Query Frame = 2 
Query:  320 SSYAHSMSVSWSLPDYLRRMFDYHQMDMEATADQMVTLLSVNPQRVYKTAYYRKQTKNHWARDDPGFAVLQAFFLVVATFAFGVAFGARGVWTYVGL--LLHTVGVHWLLCGVVMSSFCRWIANSRLL-QH----RSHSVEQEVEWMYAWDIHSNSFFPLFVWLYVVQLLLLPLLAGQSVWSLMLSNTLYAVAFSVYFYVTHLGYRSLPFLHTTEVFLYPVVAIIMLLLLSIILLPFGIRVNATLTVAKMYF 1054
            SSY    ++S+    YL R+ D+ QMD+++  DQM TL ++ PQRVYKT+YYRKQTK+HW+RDDP FA+LQ  FL VA+ A+ +AF   G   Y  L    + + +++LL GVV+S+ CR IAN+ L  QH     SH V Q VEW+YA+DIH N+FFP FV +Y  Q  LLP++  + + SL++SNTLYA+AF  YFY+THLGYR+LPFL  TEVFL+PV  +  + +L+ I  PFG+  NA+  VA +YF
Sbjct:   41 SSYGGMSAMSYDPQQYLHRILDFQQMDVQSALDQMRTLCTLQPQRVYKTSYYRKQTKDHWSRDDPAFAILQIGFLAVASLAYCIAFRVSGNMIYGTLRFAFNNIIINYLLSGVVISTICRSIANTYLTHQHPRNSNSHVVRQGVEWLYAFDIHCNAFFPFFVLIYCAQFFLLPVVLQRGLVSLIVSNTLYALAFGWYFYITHLGYRALPFLSGTEVFLFPVAGVAAIYVLNFIGFPFGLGFNASRLVAHLYF 292
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BLAST of mRNA_P-littoralis_Contig110.75.1 vs. uniprot
Match: A0A6V1WU61_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1WU61_HETAK)

HSP 1 Score: 235 bits (599), Expect = 1.690e-69
Identity = 128/261 (49.04%), Postives = 175/261 (67.05%), Query Frame = 2 
Query:  272 MLPSSVGGRYAPHRHGSSYAHSMSVSWSLPDYLRRMFDYHQMDMEATADQMVTLLSVNPQRVYKTAYYRKQTKNHWARDDPGFAVLQAFFLVVATFAFGVAFGARGVWTYVGLLLHTVGVHWLLCGVVMSSFCRWIANSRLLQHRSHSVEQEVEWMYAWDIHSNSFFPLFVWLYVVQLLLLPLLAGQSVWSLMLSNTLYAVAFSVYFYVTHLGYRSLPFLHTTEVFLYPVVAIIMLLLLSIILLPFGIRVNATLTVAKMYF 1054
            MLP  + GR A + + S+ A+S    +S  +YLRR++D++QMD EA  DQ +TLLS NP +VYK++YYRKQTKN WARDDP FAV+Q   L+ +  A+GVAF A   W +  ++   VG+ ++  GV ++S   W AN+RL Q R+ +V Q VEW +AWD H N+  P F+ L+VVQ  LLPLL G+S  +L  +NTLYA +   Y YVTHLGYR+LPFL  TEV+LYP   II+L ++S++L   G+  N T  V+  YF
Sbjct:    1 MLP--LDGRTARYSNFSNRAYSNG--YSSNEYLRRIYDFNQMDFEAAFDQFMTLLSRNPAQVYKSSYYRKQTKNQWARDDPAFAVIQILLLIASACAYGVAFSAGSFWHFFTIIFKMVGIQYVGVGVFIASLGSWFANARLRQVRAGTVAQRVEWAFAWDAHCNAHAPAFLLLHVVQYFLLPLLMGRSWLALAAANTLYAASLLAYVYVTHLGYRALPFLSNTEVYLYPAGVIILLYVISLLLGLVGVSCNMTRIVSHFYF 257
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BLAST of mRNA_P-littoralis_Contig110.75.1 vs. uniprot
Match: A0A7S2ENT4_TRICV (Hypothetical protein n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2ENT4_TRICV)

HSP 1 Score: 236 bits (603), Expect = 2.010e-69
Identity = 128/244 (52.46%), Postives = 172/244 (70.49%), Query Frame = 2 
Query:  338 MSVSWSLPDYLRRMFDYHQMDMEATADQMVTLLSVNPQRVYKTAYYRKQTKNHWARDDPGFAVLQAFFLVVATFAFGVAFGARGVW----TYVGLLLHTVGVHWLLCGVVMSSFCRWIANSRLLQHRSHS-VEQEVEWMYAWDIHSNSFFPLFVWLYVVQLLLLPLLAGQSVWSLMLSNTLYAVAFSVYFYVTHLGYRSLPFLHTTEVFLYPVVAIIMLLLLSIILLPFGIRVNATLTVAKMYF 1054
            ++ S +   YL R+ D  QMD ++  DQM TLL+  PQRVYKTAYYRKQTKNHWARDDP FA LQ  FL VA+ A+ VAFG+ G+       +G  L ++ ++WL  G+V +S CR I+N+ L+ H S + V Q VE++YA+DIH N+FFPLFV +Y VQ  LLP++ G+ + +L+LSN L+A AF  YFYVTHLGYR+LPFL  TEVFL+PV  +++L  L++I  PFG   NA+  +A +YF
Sbjct:   67 LTSSMTPSQYLSRILDVGQMDFQSALDQMKTLLTPQPQRVYKTAYYRKQTKNHWARDDPAFAALQIAFLSVASLAYSVAFGSDGLGGTLTAALGFGLKSILINWLAVGLVTASVCRSISNNHLVVHSSAAHVRQRVEFLYAFDIHCNAFFPLFVLIYGVQFFLLPVVLGRGLMALLLSNALFAAAFGWYFYVTHLGYRALPFLTNTEVFLFPVALVVLLFFLNLIGHPFGFGWNASRIMAYVYF 310
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BLAST of mRNA_P-littoralis_Contig110.75.1 vs. uniprot
Match: A0A7S2U7N4_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U7N4_9STRA)

HSP 1 Score: 233 bits (593), Expect = 3.010e-68
Identity = 124/248 (50.00%), Postives = 172/248 (69.35%), Query Frame = 2 
Query:  317 GSSYAHSMSVSWSLPDYLRRMFDYHQMDMEATADQMVTLLSVNPQRVYKTAYYRKQTKNHWARDDPGFAVLQAFFLVVATFAFGVAFGARG-VWTYVGLLLHTVGVHWLLCGVVMSSFCRWIANSRLLQHRSHS-VEQEVEWMYAWDIHSNSFFPLFVWLYVVQLLLLPLLAGQSVWSLMLSNTLYAVAFSVYFYVTHLGYRSLPFLHTTEVFLYPVVAIIMLLLLSIILLPFGIRVNATLTVAKMYF 1054
            G     S+    S   YL R+ D  QMD+++  DQM TL +++PQRVYKT+YYRKQTKNHWARDDP F  LQ  FL +A+ A+ VAF     V + +G  + ++ ++W   G++++S  R  AN  L  H+S S V Q VEW+YA+DIH N+FFPLFV LY +Q  LLP++ G+S+ SL+L+NTLYA AFS YFY+THLGYR+LPFL +TEVFL+P+  I+++ L++++  PFG   NA+  +A  YF
Sbjct:   41 GGGALSSLGTVMSPAQYLARLVDVQQMDVQSALDQMRTLCTLSPQRVYKTSYYRKQTKNHWARDDPAFCFLQMVFLALASIAYCVAFREDSLVSSTIGFAIKSILINWFGLGILIASIGREFANRHLTVHQSSSHVRQGVEWLYAFDIHCNAFFPLFVALYGLQFFLLPIVLGKSLLSLVLANTLYAAAFSWYFYITHLGYRALPFLSSTEVFLFPIAGIMIVYLINLVGYPFGFGWNASRIMAHFYF 288
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BLAST of mRNA_P-littoralis_Contig110.75.1 vs. uniprot
Match: A0A7S1GMY0_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GMY0_CYCTE)

HSP 1 Score: 231 bits (588), Expect = 4.640e-68
Identity = 122/230 (53.04%), Postives = 167/230 (72.61%), Query Frame = 2 
Query:  365 YLRRMFDYHQMDMEATADQMVTLLSVNPQRVYKTAYYRKQTKNHWARDDPGFAVLQAFFLVVATFAFGVAFGARGVWTYVGLLLHTVGVHWLLCGVVMSSFCRWIANSRLLQHRSHS-VEQEVEWMYAWDIHSNSFFPLFVWLYVVQLLLLPLLAGQSVWSLMLSNTLYAVAFSVYFYVTHLGYRSLPFLHTTEVFLYPVVAIIMLLLLSIILLPFGIRVNATLTVAKMY 1051
            YL R+ D+ QMD+++  DQM +LL   P  VYKT+YYRKQTKNHWARDDP F VLQA FL VA+ A+ VAF +  +   +G LLHT+  +WL+ G ++++  R +AN  L  H+S S V+Q VEW+YA+DIH N+FFPLF  LY VQ  LLPL+ G+S+ + +LSNTLYA AFS Y+Y+THLGYR+LPFL  TEVFL+P+  I ++ +L+++  PF +  NA+  +A +Y
Sbjct:   21 YLARLTDFRQMDIQSALDQMRSLLGGRPHVVYKTSYYRKQTKNHWARDDPAFCVLQAVFLFVASLAYAVAFRST-LSGGMGFLLHTILWNWLVAGTIVATIARELANRHLCVHQSTSHVKQTVEWLYAFDIHCNAFFPLFCLLYGVQFFLLPLVLGKSLLAFLLSNTLYAAAFSWYWYITHLGYRALPFLSNTEVFLFPIAGIALVFVLNLVGYPFDMGWNASRLLATIY 249
[Close]
BLAST of mRNA_P-littoralis_Contig110.75.1 vs. uniprot
Match: A0A1E7FEU6_9STRA (UNC-50 protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FEU6_9STRA)

HSP 1 Score: 230 bits (587), Expect = 4.870e-68
Identity = 122/240 (50.83%), Postives = 170/240 (70.83%), Query Frame = 2 
Query:  338 MSVSWSLPDYLRRMFDYHQMDMEATADQMVTLLSVNPQRVYKTAYYRKQTKNHWARDDPGFAVLQAFFLVVATFAFGVAFGARGVWTYVGLLLHTVGVHWLLCGVVMSSFCRWIANSRLLQHRSHS-VEQEVEWMYAWDIHSNSFFPLFVWLYVVQLLLLPLLAGQSVWSLMLSNTLYAVAFSVYFYVTHLGYRSLPFLHTTEVFLYPVVAIIMLLLLSIILLPFGIRVNATLTVAKMYF 1054
            M+ S S   Y+ R+ D+ QMD+++  DQM T+LS  P  VYKTAYYRKQTKNHWARDDP FA L+  FL V+  A+ ++F    V   +   L++V  +WL  G ++++  R +AN  L  H+S S V Q VEW+YA+DIH N+FFP+FV LY VQ  LLPL+ G+S++SL++SNTLYA  F+ Y+Y+THLGYR+LPFL  TEVFL+PV AI ++ +L+++  PFG+  NA+  +A +YF
Sbjct:    1 MTSSASTAQYIARLTDFRQMDIQSALDQMKTILSTRPHVVYKTAYYRKQTKNHWARDDPAFAALEFIFLTVSCIAYAISFRVP-VTEGIAFWLYSVLFNWLGLGFIIATVGREMANRHLTDHKSTSHVRQSVEWLYAFDIHCNAFFPVFVLLYGVQFFLLPLVLGKSLFSLVVSNTLYAAGFAWYWYITHLGYRALPFLSQTEVFLFPVAAIALVFVLNLVGYPFGLGWNASRIMAHIYF 239
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig110.75.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMG0_ECTSI2.660e-13794.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z945_9STRA1.510e-9258.78UNC-50 n=1 Tax=Tribonema minus TaxID=303371 RepID=... [more]
A0A7R9YBX5_9STRA1.680e-7152.10Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S1Y6X4_9STRA3.200e-7052.72Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S0G7V0_9STRA1.150e-6950.79Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A6V1WU61_HETAK1.690e-6949.04Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2ENT4_TRICV2.010e-6952.46Hypothetical protein n=2 Tax=Trieres chinensis Tax... [more]
A0A7S2U7N4_9STRA3.010e-6850.00Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S1GMY0_CYCTE4.640e-6853.04Hypothetical protein (Fragment) n=1 Tax=Cyclophora... [more]
A0A1E7FEU6_9STRA4.870e-6850.83UNC-50 protein n=1 Tax=Fragilariopsis cylindrus CC... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig110contigP-littoralis_Contig110:367682..373759 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LMG0
Preferred nameUNC50
PFAMsUNC-50
Model size1840
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
GOsGO:0000139,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005637,GO:0005737,GO:0005794,GO:0006810,GO:0006937,GO:0007154,GO:0007165,GO:0007166,GO:0008150,GO:0009987,GO:0012505,GO:0016020,GO:0016021,GO:0019866,GO:0023052,GO:0030173,GO:0031090,GO:0031224,GO:0031228,GO:0031300,GO:0031301,GO:0031503,GO:0031965,GO:0031967,GO:0031975,GO:0031984,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044057,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051234,GO:0051239,GO:0051641,GO:0051668,GO:0051716,GO:0065007,GO:0090257,GO:0097120,GO:0097159,GO:0098588,GO:0098791,GO:1901363
Exons9
Evalue1.22e-143
EggNOG OGsKOG3012@1|root,KOG3012@2759|Eukaryota
Descriptionprotein transport
Cds size789
COG categoryT
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig110.75.1prot_P-littoralis_Contig110.75.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig110 369270..372979 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789434.773908-UTR-P-littoralis_Contig110:367681..3679511680789434.773908-UTR-P-littoralis_Contig110:367681..367951Pylaiella littoralis U1_48UTRP-littoralis_Contig110 367682..367951 +
1680789434.7864704-UTR-P-littoralis_Contig110:369268..3692691680789434.7864704-UTR-P-littoralis_Contig110:369268..369269Pylaiella littoralis U1_48UTRP-littoralis_Contig110 369269..369269 +
1680789434.8906085-UTR-P-littoralis_Contig110:372979..3737591680789434.8906085-UTR-P-littoralis_Contig110:372979..373759Pylaiella littoralis U1_48UTRP-littoralis_Contig110 372980..373759 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789434.800623-CDS-P-littoralis_Contig110:369269..3693921680789434.800623-CDS-P-littoralis_Contig110:369269..369392Pylaiella littoralis U1_48CDSP-littoralis_Contig110 369270..369392 +
1680789434.810262-CDS-P-littoralis_Contig110:369786..3698481680789434.810262-CDS-P-littoralis_Contig110:369786..369848Pylaiella littoralis U1_48CDSP-littoralis_Contig110 369787..369848 +
1680789434.8203094-CDS-P-littoralis_Contig110:370257..3702831680789434.8203094-CDS-P-littoralis_Contig110:370257..370283Pylaiella littoralis U1_48CDSP-littoralis_Contig110 370258..370283 +
1680789434.8327122-CDS-P-littoralis_Contig110:370968..3710331680789434.8327122-CDS-P-littoralis_Contig110:370968..371033Pylaiella littoralis U1_48CDSP-littoralis_Contig110 370969..371033 +
1680789434.8440235-CDS-P-littoralis_Contig110:371219..3713441680789434.8440235-CDS-P-littoralis_Contig110:371219..371344Pylaiella littoralis U1_48CDSP-littoralis_Contig110 371220..371344 +
1680789434.8577163-CDS-P-littoralis_Contig110:371642..3717721680789434.8577163-CDS-P-littoralis_Contig110:371642..371772Pylaiella littoralis U1_48CDSP-littoralis_Contig110 371643..371772 +
1680789434.8705242-CDS-P-littoralis_Contig110:372182..3722971680789434.8705242-CDS-P-littoralis_Contig110:372182..372297Pylaiella littoralis U1_48CDSP-littoralis_Contig110 372183..372297 +
1680789434.8813004-CDS-P-littoralis_Contig110:372836..3729791680789434.8813004-CDS-P-littoralis_Contig110:372836..372979Pylaiella littoralis U1_48CDSP-littoralis_Contig110 372837..372979 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig110.75.1

>prot_P-littoralis_Contig110.75.1 ID=prot_P-littoralis_Contig110.75.1|Name=mRNA_P-littoralis_Contig110.75.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=263bp
MLPSSVGGRYAPHRHGSSYAHSMSVSWSLPDYLRRMFDYHQMDMEATADQ
MVTLLSVNPQRVYKTAYYRKQTKNHWARDDPGFAVLQAFFLVVATFAFGV
AFGARGVWTYVGLLLHTVGVHWLLCGVVMSSFCRWIANSRLLQHRSHSVE
QEVEWMYAWDIHSNSFFPLFVWLYVVQLLLLPLLAGQSVWSLMLSNTLYA
VAFSVYFYVTHLGYRSLPFLHTTEVFLYPVVAIIMLLLLSIILLPFGIRV
NATLTVAKMYFS*
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mRNA from alignment at P-littoralis_Contig110:367682..373759+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig110.75.1 ID=mRNA_P-littoralis_Contig110.75.1|Name=mRNA_P-littoralis_Contig110.75.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=6078bp|location=Sequence derived from alignment at P-littoralis_Contig110:367682..373759+ (Pylaiella littoralis U1_48)
CTGCGGTCTCACGTCCTAGGCGCGTGTGCGGGTGAGCCTTGCACAAGCAA
CAAAGGGACAGGATTATCGGTGTGTCCTCAATATAGCAGCTCTACGACTC
GATATATATCATTATCACTGGGCACTGGTATATTTAGTGCAAGCTGGAAC
AATACCGGACACGTGCTCCGCGACAACAGCAGTCCTGTACAAGCAGTGCA
GTGAGTCAAGCCGCTGTGTGGCGCATTGCATTGCGGGCTTGATTTGCGTG
GTTCTTCTGGTGCTTCGAAGGTGAGGAATAAGTGATATCGTCACGTGAGT
CACCTTTTCGGCTCTGACTTCCGCCAAGCCTGTCCTTAATTTACCCTGGG
CGGGTGCGACCTACTGCTGTACGGGTAGGTCTTTCGGCTGTGCCTGAACT
TGTTATACACCGCAGGCGCTGGCCGTGCTGATCAAAGCTTACCGGAGGTT
GGATAAGATACCACAACCCTTCGGCCGAGTTTCAAAGATCAAATGCCCTC
CAATGAAGAGGACTTCAACTTCAAACGGCGTTTTCGGGAAGCTCTCGACG
AGACGATAGATGGTTCAATATCGAACGCTATGTTCGGTACTACACTCCCA
CTTGTTGCTGTTGAGCGCTCGCATGCTGTGACGCTGTGTGGAACTCGGCC
TGTTTAAAAAATCTTTTCAAAAATTGGCAAGGGGGTGGTATTCAACGCGA
CTCTACAGCATTTTGTGTGATGCGAAATACGAAGTATCGTACTTCGTATT
TACAAGTACGTTCATACAAGCGAACAGTTCCTTTTAACTGCTGTACTGCT
GTGTGCTGTGCAGGACGTTACCCCCTTCATGTCAGACATTTTTTAACAAT
ATTGCCATGTTGCTGTAGCAGTAGTACCTTCTTCAGGTTTCACACTCAGA
GCGCAGACTAGTAAGATTGTCTAGCGCACGCAGCGGCGTATCGTGTTCCA
CAGCAGGGATTAATTATCCATGACAAGAAGAGAACAGCAGTTGGTTGCAG
CAGCAGCTGGATCTTTGACTGCTGTTTGTTTGCTGTCCCTGAACATAAAC
CGAAGATGCCATCGTTGTTGTTGAATCATCCAGGAGAAATAAAATTGCTG
AATGCAACTGGGTTAAGTTATAAGTACAAGTCTTAAAACAACACAGAAAA
GCACGGACAACTCGGCGAAGCGGCGACGACTCGCACCGGATAACTATCCT
GGAGTAGACTTCTGCTGTACAGCAAATGTTGTCTAGCGGTCACCAGCGAA
CCGGGTGGAGCCTTGCTATGGCGTCTTGTGTGCAGTATGGTGTCGAAAGA
GGTTGGTGATATCCTCGGCGCGAACGAACGAACAAACGAACTTGTGCGTT
TTTTTTCGAAAAGACGTTTTCGCTGCGTTCGGCTCTTTTCCAGAGGATGC
GCACTACTTCTGAAATACCAGGTAATGCATGCACGCGGGTGATGATAATG
TTTTGGCACTTCCTAACAGGTGCATGCAAAAGCAAGGCGATATACGTTTG
GCCGCTTTAATCTCCGTTAGTTGTTTGACAGGAAAACCGCGCCCTTGAAT
CACTTGTTCCGGACGCTGTCGAATCGTAATATGGTAGGATGCTCCCCAGC
AGCGTTGGGGGCAGGTACGCTCCTCACCGACATGGGTCATCATACGCACA
TTCAATGTCAGTGTCATGGAGCCTTCCGGACTACTTGAGACGCATGTTTG
ATTACCACCAGGTGAGTCCAATTAAAATCTGGGAGGAGACCTACCCGACA
CTCAGGTTGTAGGTGGAGAGTGATGAACCATACTTTTATGTACAGTACCA
CAGTGTATTCGGTTGCTTGCGTGGTGCAAGCCTGCACGCGGAAGAGGGGC
GCAGGCGCGAGAGAGACGTCGCGCATACTTTGGACTAATACTGGTTTTGT
TCGTGGAACAAACTACGGTAAGCTCTTGAATTGCCCATGTCCGGCTATTT
CTGTCGTGTTTACCCCGTGAGGGCTGTCGCTAAATACAACTGTCACCAAA
CCGCCTATGGCTAGGTGACCCGCGTTTGCGATACCCACTCATGTGCCGCT
CTAATGCTGCTGTACCGCTGCTACTGCTGCTGCGAAATCTCCGCATGATC
TTAAGATGGATATGGAGGCGACGGCAGATCAAATGGTGACCCTTCTGAGC
GTCAACCCCCAAAGAGTGTGAGTGGTTCCATCTTGTCGTGTTGAGCTTTT
GGTTTTTGAGTCGTGACTGATCGAGCCTCCTTCGTGAAACCCTATACCTA
TTTCCTTGTGAGGTCAACCTGCTCCAGGAATGTCCATAAGTCTTGTACTT
CAGTTGGTTTACTCAAAGAACATAAGCGTTATTACATGCCCCTTTTCAGA
CGATTTTTTACCGGCCGTCTAAGAGCAGATACATTGATTCCTGCGTGCCT
CACGTAGTCTTAAAACTGCACCGTTGCCCTGATATGATATCTCTCGTCCC
TCCTGCTTCCTTCCAACACTTCGCACGCTCCCCAACCCCCTTTGATGTCG
ATCGATGCCGTGATGTTGAATGTCGTTGGTTGCCGGTGGTGGTGAAATGG
AATGGAACGGAACCCATCTGCAAAAGGTACAAGACGGCGTACTACAGAAA
ACGTGAGTCTTTGTCGCCCTCAACTCGGCTGTGCTGCTGTACTATGCTGC
GCTGTGCTATTCTGCCCGTCTAGTTTCGTTTTCGGAGCATTCCCGTAGTC
GTTCTGACGAGTCGTGTGTGTTCCTTGAATGGTGCACTGTAGGAGACGCG
AGGCAGAAGTCACAGTTGAGTTAACTGGTGTCACGCATGCCATCACCGCC
CTGTGATGCGGTATATGAGGGCTGCCGTTTCCGTGTAAAGGATGTCGCGG
TCATGACGCAGCTCGCAAATGTATCACTGTCGGAGGCGACTGCGAGTTGT
TGCTGGTCCGTGTCTCTACGATCATCGTTTCTCCGGTTCCAGATAAGTGA
TGATCGTGATGGAAAGATCGAACACTTTTGTATCTTGCGGATTCGCTCGC
CACCACAGAAGTGCCCCTGCCTGAATGATCGCACTTTCCACTAGGAGCGA
AACTCCCGTCCCTGTTCACACGAAGGGACGTCTCGGGGACGTGTTCTCTG
CTCTAAATTAGACAACCTGTTTTCGGCTACGTATGGCAGTTCCCTCTGCC
CCTTTGATCGTGAACATTGCACTGCGATCCATGAAAATGCTTGCGCCAAC
CCCCCGCGCGCGGGCTCCTAAGTTCAATCGTTTGATTGTTCGATTGTTTG
ATCGTTCCCCGGCTGCGTTGTTGTGTTCGCGTGGCAGAAACTAAGAACCA
TTGGGCAAGAGACGATCCTGGGTTTGCAGTCTTGCAAGCGTTTTTTCTTG
TGGTGAGTGGCATTTCAACGTGCAACAATAATGTCCTTACATTTGAATTC
CCCTGCCTTCACAAACAGGCAAAACAAGTGGCCAAATAACTTCTGTTGAT
CGGTCCCATCTTTATCTTCCCCGTCCACTTTCCCTGTTTGTGCTGCCACA
TCTGTCTCATATTGTGTTGTTGTGTGCCTTTGGAAAAGGTGGCGACATTC
GCCTTCGGCGTGGCATTTGGCGCCAGGGGCGTCTGGACATACGTGGGGTT
GTTGCTGCACACGGTGGGGGTACACTGGTTGCTGTGCGGGGTGGTGATGT
CGTCTTTCTGCAGGTGCGGGTTCGTTTTTGGTTGGATGTTCTCGGTCGGT
TTTGGTGGTTTTTCTGCTGTGGTGTGGTCTGGAAGTGCGTGTCTTCTATA
CGGTGATGATGCTGTTCCTGCTGTACATTAGGATTGGTGGTCGGTCACAC
AAAGCGACGGGTGGCCTTTTGTTTCAACGCAAGAGTCGCCGGCACGGAAA
GGTGTGTGTCGTAGCCATTCCTGCGCGTATCCGAAACGGCACAGTTGTTC
GAGGTTCGAGCGGCAGCGCGACTAGGTTGTCACTTCGTTTTTTGTTCGGC
GGCTCTTGCAGGTGGATAGCGAACAGCCGCTTGCTGCAGCATCGATCTCA
CTCCGTCGAGCAAGAAGTGGAGTGGATGTACGCCTGGGACATCCATAGCA
ACTCCTTCTTCCCGCTTTTTGTATGGCTCTACGTTGTGCAGGTGAGGCAA
TGCTGCTGCTCTGCTGCTGCTGCTGCTGCTGCTGCTGCTTGTTTCCTTGT
TTTGCTGTTGCGTTGCTGTCATCGTTGTTTATGTGACGATACGAAACGGG
GAACATCAGCTCCAGGATGATGCCCTGCAGGAGTATGTTCACAGCACAAA
GGGTAAAATTGAAACAGCGACACCGTCGCCGCAGCAAGGCCGCGTCAAGG
AAACTTGCTGTGGTTCCCTCGCCACGTGATTTCGGTCATTTTGCTGACAT
GATACCGGAGGCTTGGGTACCCCCGTGCTGTACTGCATGTATTCCTGATG
GAGTGCCAGTAGCCGGCACACAGCAAATGAAAGAAATGACCGAATCCCAC
GCTATTCTTGCACGTGTCTTCACGGATGAAACGCACCCTTGCGCTTCGCA
GCTGCTGCTGCTGCCTCTGCTGGCGGGGCAGTCGGTATGGTCCCTGATGT
TGTCCAACACTCTCTACGCCGTGGCCTTCTCGGTTTACTTTTACGTTACT
CACCTGGGATATCGATGTGAGTACCGACCGGAACGCCTGGACACATTGAC
CCCATCTGTCTTTCTGCCAAGTGAATGGATGATATTGAGGTTCTTGGTCT
GTTGTTGTTGAGCTTTGCTACGGCGTTCTCCGTGAACATGTAGGTCACAT
CGTGCAGAATCGATGTAAGTATGCGATATTTTTCTTGACAAATTGAGCGT
TGGGCCCTTTCCTACAAAGTCAAGGTTTTACTCCTCGAACAATACTCCAC
AGTGACTCCCGGCGACACCCCCTCCTTCGGACTGCTCAGCTTGCTTTCAT
CACCGAAATGCAAGTGCGTGGTTGTACCTCTTGCGCGCCCATTTTCGTGT
GTCGTCGCGCTAGTGCATCGCGCCTTCCCTAGCCACAGAGCACGAAATAC
CTGCCCACCTCATGTTTCTCGGGGAATACTGTATCGCGCTCGAGTTTGAC
CCTGCGTGTCGTGTGCCTCCCTCGCCTCCCTCGCCTCCCTCTCTGTCTGC
GCTATTTCCTCATGAACATGATCATGAACGGGCACCGACGCCACCATGCA
TGTAGCTCTGCCGTTCTTGCACACGACGGAGGTATTCCTCTATCCGGTGG
TGGCCATCATCATGCTGCTGCTGCTGTCCATCATACTCCTGCCCTTTGGG
ATTCGTGTCAACGCCACCCTGACCGTGGCAAAAATGTACTTCTCCTAGGT
TAGATTTTTTACTTCAAAGTACCTTTTATCTCTCCTCTGCCGGAGCGAAG
CACAAACCTTATGTGGCTCGACATTGGGATCAAGTGCTGTCTCTCTCTCT
CTCGTGTAACGGTTGATGGGTGCTCCCTCTTTTGTCGGGGCCTTTTCAAG
GAGTTGGTTGAAGCGTGCGTGCCAGTCGGGCGTAATTAATGTTATTTATG
AACGAGACGAGCAGACCTTTTTGCGGCATGCCACGTGTATCCCTATCCCT
TCTTATTTGTGGAGGGCGTGTGGGTTCGTCAAGTAGTGGATGCTCGTTGC
AGATGGGGAACGTCGCGTGGGAGTGATGCTCATCTCGTCTTGCTTTCTCG
ATGGAAACTCCAAAAGGTTGCTGGCAAGAGATCACGGTTTTAATTCTTTT
CTAGAACGCCCATGGGATGAATGGATTCTCGAAAGGATAAGAGAAGCTGC
TGTGTGCGTGTAGAGTTGTCTTGCTCTGGTCAACGTATCATCCTATTATT
GTCCCCATCATCTTGAAAGACTGTAAAATAAATGGATCGCACCTGTTATT
CTGTGTGGAGCAGCAGCAACAGCAGCAGTTTGCTGGGGATCTGCATCAGA
ACGTCTCACGATTACTATCCATCACATTGTGCCAGTGACCCCCGACTCAA
ACTGATGATTTTTTCCCGAGGTGTGCCCTTTGCTCGTTATCGTTGTAGTC
ACATGACTCCGCGCTGAGCAGGCCGTGATGAAACGTGTCTCACGGTAAGA
TGGTCGGAGGGATCTATCTGTCAAGCAC
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Coding sequence (CDS) from alignment at P-littoralis_Contig110:367682..373759+

>mRNA_P-littoralis_Contig110.75.1 ID=mRNA_P-littoralis_Contig110.75.1|Name=mRNA_P-littoralis_Contig110.75.1|organism=Pylaiella littoralis U1_48|type=CDS|length=789bp|location=Sequence derived from alignment at P-littoralis_Contig110:367682..373759+ (Pylaiella littoralis U1_48)
ATGCTCCCCAGCAGCGTTGGGGGCAGGTACGCTCCTCACCGACATGGGTC
ATCATACGCACATTCAATGTCAGTGTCATGGAGCCTTCCGGACTACTTGA
GACGCATGTTTGATTACCACCAGATGGATATGGAGGCGACGGCAGATCAA
ATGGTGACCCTTCTGAGCGTCAACCCCCAAAGAGTGTACAAGACGGCGTA
CTACAGAAAACAAACTAAGAACCATTGGGCAAGAGACGATCCTGGGTTTG
CAGTCTTGCAAGCGTTTTTTCTTGTGGTGGCGACATTCGCCTTCGGCGTG
GCATTTGGCGCCAGGGGCGTCTGGACATACGTGGGGTTGTTGCTGCACAC
GGTGGGGGTACACTGGTTGCTGTGCGGGGTGGTGATGTCGTCTTTCTGCA
GGTGGATAGCGAACAGCCGCTTGCTGCAGCATCGATCTCACTCCGTCGAG
CAAGAAGTGGAGTGGATGTACGCCTGGGACATCCATAGCAACTCCTTCTT
CCCGCTTTTTGTATGGCTCTACGTTGTGCAGCTGCTGCTGCTGCCTCTGC
TGGCGGGGCAGTCGGTATGGTCCCTGATGTTGTCCAACACTCTCTACGCC
GTGGCCTTCTCGGTTTACTTTTACGTTACTCACCTGGGATATCGATCTCT
GCCGTTCTTGCACACGACGGAGGTATTCCTCTATCCGGTGGTGGCCATCA
TCATGCTGCTGCTGCTGTCCATCATACTCCTGCCCTTTGGGATTCGTGTC
AACGCCACCCTGACCGTGGCAAAAATGTACTTCTCCTAG
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