mRNA_P-littoralis_Contig11.92.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig11.92.1 vs. uniprot
Match: A0A6H5JUK3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK3_9PHAE) HSP 1 Score: 217 bits (553), Expect = 2.550e-62 Identity = 127/247 (51.42%), Postives = 156/247 (63.16%), Query Frame = 1
Query: 754 CSACRRADDGTGLRKPRPRTAERIHQFGGESDVLVLFP--KRLMASDDPLLLCKRTGCLLKLFEQRE---NSERA--KHAGGPRKRRSSTQVPEPVAHLQRRPFDRYCTSPSAVDALVAEVSIEGVVLDMCGGRMDAVALRVGLSCTVVTNDVRNRC-ADTNLDSGSRSFPREYLEKAG---QPDWVVTSPLYRGAINFVKSALGVARYGVALKLPLSFLEPCADRGIWLKENPPSVCVVLRRVTHT 1461
CSAC + G R R RT E + F E+ + FP + + A + L LCKR GCLL+L++++E + ER K PR R + PEPV H +RR DRYCT P AV+ L V+I G VLDMCGG DAVA +C V+TNDV +R A TNLD+ SF R+ KA QPDWVVTSP Y+GA+ FVK+AL VA GVALKLPLSFLEPCADRG WL +NPP+VC+ LRR +T
Sbjct: 25 CSAC--LEWGQDFRHTRARTGELVRSFVDEAGIADKFPGFQSIAAGTNLLALCKRAGCLLELYQKQEWARSRERVARKAKQMPRHSRMWSAAPEPVTHDKRRRLDRYCTLPEAVEVLQNAVAIAGCVLDMCGGPEDAVAQGFRSTCEVLTNDVSSRLSAGTNLDASLLSF-RDNFRKANPGKQPDWVVTSPPYKGAVGFVKAALAVATKGVALKLPLSFLEPCADRGGWLVDNPPAVCIFLRRAKYT 268
BLAST of mRNA_P-littoralis_Contig11.92.1 vs. uniprot
Match: A0A6H5KHQ4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHQ4_9PHAE) HSP 1 Score: 206 bits (523), Expect = 5.100e-58 Identity = 119/263 (45.25%), Postives = 154/263 (58.56%), Query Frame = 1
Query: 748 EVCSACRRADDGTGLRKPRPRTAERIHQFGGESDVLVLFP--KRLMASDDPLLLCKRTGCLLKLFEQRENSERAKHAGGPRKRRSS-----TQVPEPVAHLQRRPFDRYCTSPSAVDALVAEVSIEGVVLDMCGGRMDAVALRVGLSCTVVTNDVRNRCA-------DTNLDSGSRSFPREYLEKA--GQPDWVVTSPLYRGAINFVKSALGVARYGVALKLPLSFLEPCADRGIWLKENPPSVCVVLRRVTHTPRM**RGSF 1488
E C AC R DD G R+ RPRT + F + + FP L D L+ CKR C+LK ++ + A +KR S T PEP H++RR DRYCTS AV+AL+ V++ G VLDMCGG DAVA ++ +C VVTNDV +R + DT+LD+ +F E+L QP+ VV SP Y+GA+ FVK+AL VA++GVALK LSFLEPC DR WL+ NPP+VCV LRR ++TP G F
Sbjct: 11 ETCDACLREDDAAGYRQLRPRTMSMLRAFVRNAGLAEKFPGVMPLGVGIDSLVRCKRAECVLKQNDKHMSDFCHDRARKKQKRNRSEAATWTSAPEPAVHVKRRHLDRYCTSIVAVEALLDAVNVSGRVLDMCGGPDDAVARKLRDTCEVVTNDVSSRLSSDARRAPDTSLDASKSTFAAEFLADGFQQQPERVVASPPYKGAVKFVKAALCVAKHGVALKRSLSFLEPCVDRADWLEANPPTVCVFLRRASYTPEHVMMGEF 273
BLAST of mRNA_P-littoralis_Contig11.92.1 vs. uniprot
Match: A0A6H5K049_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K049_9PHAE) HSP 1 Score: 203 bits (516), Expect = 6.740e-58 Identity = 111/202 (54.95%), Postives = 140/202 (69.31%), Query Frame = 1
Query: 883 SDDPLLLCKRTGCLLKLFEQRENSERAKHAGGPRKRRSS-----TQVPEPVAHLQRRPFDRYCTSPSAVDALVAEVSIEGVVLDMCGGRMDAVALRVGLSCTVVTNDVRNRCAD-TNLDSGSRSFPREYL--EKAGQPDWVVTSPLYRGAINFVKSALGVARYGVALKLPLSFLEPCADRGIWLKENPPSVCVVLRRVTHTP 1464
S D L+LCKR GCLL+LF N +R A P KRR+ T PEPV L+RR DRYCTSP+ ++AL+ VSI G VLDMCGG DAVA+R+ +C V+TNDV R + TNLD+ S SF ++L QPDW+VTSP Y+GA+ FVK+AL VA+ GVALKLPLSFLEPCADR WL+ NPP++C+++ R + P
Sbjct: 14 SIDKLVLCKRAGCLLELFVL--NQQRDSRA--PTKRRAKRGPKWTCAPEPVKQLKRRCVDRYCTSPATLEALLGVVSISGCVLDMCGGTDDAVAIRLRDTCQVLTNDVGPRLSPATNLDASSASFTDDFLAAHHGQQPDWIVTSPPYKGALAFVKAALTVAKKGVALKLPLSFLEPCADRAGWLQANPPALCMMMSRARYQP 211
BLAST of mRNA_P-littoralis_Contig11.92.1 vs. uniprot
Match: D7FJU4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJU4_ECTSI) HSP 1 Score: 195 bits (495), Expect = 6.230e-55 Identity = 105/194 (54.12%), Postives = 133/194 (68.56%), Query Frame = 1
Query: 895 LLLCKRTGCLLKLFEQR---ENSERAKHAGGPRKRRSS--TQVPEPVAHLQRRPFDRYCTSPSAVDALVAEVSIEGVVLDMCGGRMDAVALRVGLSCTVVTNDVRNRCA------DTNLDSGSRSFPREYL-EKAGQ-PDWVVTSPLYRGAINFVKSALGVARYGVALKLPLSFLEPCADRGIWLKENPPSVCV 1437
L+LC R CLL+L+ ++ +N R K R + T +PEP H++RR DRYCTSP AV+AL+ V +EG VLDMCGG DA+A R+G +C VVTND+ R + DTNLD+ SF ++L K GQ PDWV+TSP Y+GA+ +VKSAL +A GVALKLPLSFLEPCADRG WL+ NPP+VCV
Sbjct: 26 LVLCNRPDCLLQLYIKQLREKNKPRTKLRAQQLARHGAKWTGIPEPRKHIKRRCLDRYCTSPEAVEALLGAVELEGCVLDMCGGPGDAIATRLGATCKVVTNDISTRLSPGGLPPDTNLDASLASFAVDFLLAKPGQRPDWVLTSPPYKGALEYVKSALSLAAKGVALKLPLSFLEPCADRGGWLQANPPAVCV 219
BLAST of mRNA_P-littoralis_Contig11.92.1 vs. uniprot
Match: D8LSI1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSI1_ECTSI) HSP 1 Score: 132 bits (333), Expect = 9.670e-33 Identity = 64/117 (54.70%), Postives = 83/117 (70.94%), Query Frame = 1
Query: 1120 MCGGRMDAVALRVGLSCTVVTNDVRN-RCADTNLDSGSRSFPREYLE--KAGQPDWVVTSPLYRGAINFVKSALGVARYGVALKLPLSFLEPCADRGIWLKENPPSVCVVLRRVTHT 1461
MCGG DAVA R+ +C ++TNDV + R ADTNL++ FP ++L +P+WVVTSP Y A+ FVK+A+ +A GVA K+P+ FLEPCADRG WL+ NPPSVCV LRR +T
Sbjct: 1 MCGGPTDAVATRLRSTCEILTNDVSSGRPADTNLNASLELFPEDFLAAYSGKRPEWVVTSPPYSRALTFVKAAMSLATKGVAFKMPIFFLEPCADRGGWLQTNPPSVCVFLRRAKYT 117
BLAST of mRNA_P-littoralis_Contig11.92.1 vs. uniprot
Match: A0A6H5K929_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K929_9PHAE) HSP 1 Score: 119 bits (298), Expect = 4.270e-28 Identity = 62/114 (54.39%), Postives = 75/114 (65.79%), Query Frame = 1
Query: 1120 MCGGRMDAVALRVGLSCTVVTNDVRNRCADTNLDSGSRSFPREYLEKAGQPDWVVTSPLYRGAINFVKSALGVARYGVALKLPLSFLEPCADRGIWLKENPPSVCVVLRRVTHT 1461
MCGG DAVAL G +C V+TNDV +R S + P + QPDWVVTSP Y+GA+ FVK+ L VA GVAL+LPLSF +PCADRG WL +NPP +C LRR +T
Sbjct: 1 MCGGPEDAVALGFGGTCEVLTNDVSSRL--------SPAHPGK------QPDWVVTSPPYKGAVGFVKAVLAVAAKGVALRLPLSFRKPCADRGSWLVDNPPVMCGFLRRAKYT 100
BLAST of mRNA_P-littoralis_Contig11.92.1 vs. uniprot
Match: A0A6H5KAM1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAM1_9PHAE) HSP 1 Score: 118 bits (295), Expect = 1.070e-27 Identity = 54/88 (61.36%), Postives = 68/88 (77.27%), Query Frame = 1
Query: 1207 DTNLDSGSRSFPREYL--EKAGQPDWVVTSPLYRGAINFVKSALGVARYGVALKLPLSFLEPCADRGIWLKENPPSVCVVLRRVTHTP 1464
DTNLD+ S S+ +YL QPDWVV SP Y+GA++FVK+AL VA+ GVALKLPLSFLEPCADR WL+ENPPS+C+++ R + P
Sbjct: 13 DTNLDASSTSYADDYLAAHNGQQPDWVVASPPYKGALSFVKAALTVAKEGVALKLPLSFLEPCADRAGWLQENPPSLCMMMSRARYQP 100
BLAST of mRNA_P-littoralis_Contig11.92.1 vs. uniprot
Match: A0A6H5JT40_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT40_9PHAE) HSP 1 Score: 118 bits (295), Expect = 1.110e-27 Identity = 55/96 (57.29%), Postives = 70/96 (72.92%), Query Frame = 1
Query: 1207 DTNLDSGSRSFPREYL--EKAGQPDWVVTSPLYRGAINFVKSALGVARYGVALKLPLSFLEPCADRGIWLKENPPSVCVVLRRVTHTPRM**RGSF 1488
DTNLD+ S SF +YL QPDWVV+SP Y GA+ FVK+AL VA+ GVALKLPLSFLEPCADR +WL+ NPP++C+++ R + P + G F
Sbjct: 14 DTNLDASSASFADDYLAAHNGQQPDWVVSSPPYEGALAFVKAALTVAKEGVALKLPLSFLEPCADRAVWLQANPPALCMMMSRARYQPALVRVGEF 109
BLAST of mRNA_P-littoralis_Contig11.92.1 vs. uniprot
Match: A0A6H5KTR5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTR5_9PHAE) HSP 1 Score: 119 bits (298), Expect = 1.900e-27 Identity = 74/156 (47.44%), Postives = 93/156 (59.62%), Query Frame = 1
Query: 754 CSACRRADDGTGLRKPRPRTAERIHQFGGESDVLVLFPKRLMASDDPLL--LCKRTGCLLKLFEQRE---NSERA--KHAGGPRKRRSSTQVPEPVAHLQRRPFDRYCTSPSAVDALVAEVSIEGVVLDMCGGRMDAVALRVGLSCTVVTNDVRNR 1200
CSAC G R+ R RT E + F E+ + FP + P L LCKR+GCLL+L+++ E + ER K PR R+ + PEPV H +RR FDRYCTSP AVDAL V+I G VLDMCGG DAVA+ G +C V+TNDV +R
Sbjct: 32 CSACLEC--GEDFRQTRARTGELLRSFVDEAGLADRFPGFQSGAAGPNLFALCKRSGCLLELYKKHEWARSRERVARKAKQTPRHSRTWSAAPEPVTHHKRRRFDRYCTSPEAVDALRDAVAITGCVLDMCGGPDDAVAMGFGGTCEVLTNDVSSR 185
BLAST of mRNA_P-littoralis_Contig11.92.1 vs. uniprot
Match: A0A6H5JSV3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSV3_9PHAE) HSP 1 Score: 111 bits (278), Expect = 7.360e-25 Identity = 52/88 (59.09%), Postives = 65/88 (73.86%), Query Frame = 1
Query: 1207 DTNLDSGSRSFPREYL--EKAGQPDWVVTSPLYRGAINFVKSALGVARYGVALKLPLSFLEPCADRGIWLKENPPSVCVVLRRVTHTP 1464
DTNLD+ S SF ++L QPDWVVT P Y GA+ FVK+AL VA+ GVALKLPLSFLEPCADR WL+ NPP++C+++ R + P
Sbjct: 54 DTNLDASSASFTDDFLAAHHEQQPDWVVTRPPYNGALAFVKAALPVAKKGVALKLPLSFLEPCADRAGWLQANPPALCMMMSRARYQP 141 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig11.92.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig11.92.1 >prot_P-littoralis_Contig11.92.1 ID=prot_P-littoralis_Contig11.92.1|Name=mRNA_P-littoralis_Contig11.92.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=245bp MEMEVCSACRRADDGTGLRKPRPRTAERIHQFGGESDVLVLFPKRLMASDback to top mRNA from alignment at P-littoralis_Contig11:537665..540334- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig11.92.1 ID=mRNA_P-littoralis_Contig11.92.1|Name=mRNA_P-littoralis_Contig11.92.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2670bp|location=Sequence derived from alignment at P-littoralis_Contig11:537665..540334- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig11:537665..540334- >mRNA_P-littoralis_Contig11.92.1 ID=mRNA_P-littoralis_Contig11.92.1|Name=mRNA_P-littoralis_Contig11.92.1|organism=Pylaiella littoralis U1_48|type=CDS|length=735bp|location=Sequence derived from alignment at P-littoralis_Contig11:537665..540334- (Pylaiella littoralis U1_48)back to top |