mRNA_P-littoralis_Contig11.81.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig11.81.2 vs. uniprot
Match: D8LD45_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD45_ECTSI) HSP 1 Score: 694 bits (1792), Expect = 1.420e-237 Identity = 342/533 (64.17%), Postives = 409/533 (76.74%), Query Frame = 2
Query: 515 TPSPSAASIMMTASPTSVTSPTXXXXXXXXXXXXXXXXXXXXXSGSDTPSLNDPIPKPECNASIPVTMRYSSTTKRLYLEKLENGTRGGCVMLEQIWMARGGGEPEGVKAPLYAVDS-DGAVSANATGIWLLTEDLYVKDGITLKLWGSVAGGDTDELRLKSAPAV-DGGNATVINLRGHGGNIDILHTKVVSWDTEANDYDMNESDGRSYISVVSEKLSDPVQTCDGNAKNEMGEARMDIVSSEVGYLGYKNSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNIYDSEIHHNHYGMYTFGHERGDWRRNMMHSNTGYGFDPHDDSDFLTIHDNTVYDNGWHGIIASKRCNNVSIQGNEVYGGGDTSAGIFLHRSXXXXXXXXXXXXXNGDAGMAMLESSDSLISDNVFEANKYGVRMSVGCTNNTVSNNAFSDTLQYALYTYEGSDAPDVQPTGYSQNNVWKANSITGGPQPMKFKESDGNQLIDNVFTNPGIMEFASTTDNVVTGNIGFDEATEIKVSAPVCFISTDEASL 2107
TPSP AA I TA+PT + P +G+DTPS N PIPKPECN++ V++RYS+TT RLYLE G RGGCV +EQIW ARGGG G KAPLYAVD G S TG WLL EDLYV+DGITLK+WG+ +GG DELRLKS P DGGN T INLR HGG++D HTKV WDT N YDM+E+DGRSYIS VSE + DP QTC+GNAKN MGEARMDIV+SE+GY+G+ +SESYGLTWKVRGFCKDKSNPE+FD VNVYGNIYDSE+HH ++ +YT+GH++GDWRRN +HSN+GYG+DPHDDSDFLTIHDN VYDN WHGIIASKRCNNVSIQGN VYGG DTSAGIFLHRS NGDAGMAMLESS++ IS N+FE NKYG+RMSVGC +N VSNN ++T QYA+YTY+GSD +VQPTG SQ+N++ +N++ GGPQ +K KESDG ++ +NVF PG++EF++TT+NVVTGN+G ++ATE+++ P CF TDEASL
Sbjct: 72 TPSP-AAMIAFTAAPTMLMMPAGNGTAF---------------NGTDTPSPNTPIPKPECNSTQAVSIRYSATTGRLYLEAGVEGERGGCVTVEQIWEARGGGTTTGAKAPLYAVDPVSGEYSDVITGTWLLEEDLYVEDGITLKVWGNGSGGYADELRLKSTPPTEDGGNGTYINLRAHGGSLDFEHTKVFGWDTTNNSYDMDETDGRSYISAVSEIVLDPTQTCEGNAKNTMGEARMDIVNSEMGYMGFHDSESYGLTWKVRGFCKDKSNPEVFDQVNVYGNIYDSELHHMNFAVYTYGHQQGDWRRNTVHSNSGYGYDPHDDSDFLTIHDNVVYDNNWHGIIASKRCNNVSIQGNIVYGGNDTSAGIFLHRSSDYAVVKDNHCYGNGDAGMAMLESSNAEISGNIFEGNKYGIRMSVGCRDNFVSNNTMTNTSQYAIYTYQGSDPAEVQPTGRSQDNIFDSNTVVGGPQAIKLKESDGTRITNNVFYEPGLVEFSNTTENVVTGNVGLEDATEVELVEPACFAETDEASL 588
BLAST of mRNA_P-littoralis_Contig11.81.2 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI) HSP 1 Score: 589 bits (1519), Expect = 8.500e-198 Identity = 296/486 (60.91%), Postives = 360/486 (74.07%), Query Frame = 2
Query: 644 SGSDTPSLNDPIPKPECNASIPVTMRYSSTTKRLYLEKLENGTRGGCVMLEQIWMARGGGEPEGVKAPLYAVDSD-GAVSANATGIWLLTEDLYVKDGITLKLWGSVAGGDTDELRLKSAPAVDGGNATVINLRGHGGNIDILHTKVVSWDTEANDYDMNESDGRSYISVVSEKLSDPVQTCDGNAKNEMGEARMDIVSSEVGYLGYKNSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNIYDSEIHHNHYGMYTFGHERGDWRRNMMHSNTGYGFDPHDDSDFLTIHDNTVYDNGWHGIIASKRCNNVSIQGNEVYGGGDTSAGIFLHRSXXXXXXXXXXXXXNGDAGMAMLESSDSLISDNVFEANKYGVRMSVGCTNNTVSNNAFSDTLQYALYTYEGSDAPDVQPTGYSQNNVWKANSITGGPQPMKFKESDGNQLIDNVF----TNPGIMEFASTTDNVVTGNIGFDEAT-EIKVSAPVCF 2083
+ +DT S NDPI KP+C++ I V++RY+ TTKRLYLE + TRGGC L QIW +R G KAPLYAVD D G VS TG WLLTE+LYV+DGITLK++G+ GGD DELRL S + T INLR HGG++D + TKV SWDT N D +E+DGRSYIS VSE ++D +TC+GNAKN MGEARMDI +SE+GYLG+++SESYGLTWKVRGFCKDKSNPEIFDDVNVYGN+YDS+IHH +G+YT+GH++GDWRRN MH N+GYGFDPHDDSDFLTIHDN VY+NG+HGIIASKRCN VSIQGNEVYGG +TSAGIFLHRS NGDAG+AMLES ++ +S+N FE NKYGVRMSVGC +N S N S+ +Y YTY GSD PDV +G SQNNV+ NS +G + +K KE+DG Q +DNVF + ++ F ++V+ GN G DE E+KV+ CF
Sbjct: 27 AAADTASPNDPISKPDCDSDIEVSIRYAGTTKRLYLESADGETRGGCATLGQIWESRAG------KAPLYAVDPDSGDVSETETGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLST------SETYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDDAMNSVMQGNTGLDEGDFELKVTNDSCF 500
BLAST of mRNA_P-littoralis_Contig11.81.2 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI) HSP 1 Score: 577 bits (1487), Expect = 4.610e-193 Identity = 288/469 (61.41%), Postives = 351/469 (74.84%), Query Frame = 2
Query: 698 ASIPVTMRYSSTTKRLYLEKLENGT-RGGCVMLEQIWMARGGGEPEGVKAPLYAVDSD-GAVSANATGIWLLTEDLYVKDGITLKLWGSVAGGDTDELRLKSAPAVDGGNATVINLRGHGGNIDILHTKVVSWDTEANDYDMNESDGRSYISVVSEKLSDPVQTCDGNAKNEMGEARMDIVSSEVGYLGYKNSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNIYDSEIHHNHYGMYTFGHERGDWRRNMMHSNTGYGFDPHDDSDFLTIHDNTVYDNGWHGIIASKRCNNVSIQGNEVYGGGDTSAGIFLHRSXXXXXXXXXXXXXNGDAGMAMLESSDSLISDNVFEANKYGVRMSVGCTNNTVSNNAFSDTLQYALYTYEGSDAPDVQPTGYSQNNVWKANSITGGPQPMKFKESDGNQLIDNVF----TNPGIMEFASTTDNVVTGNIGFDEAT-EIKVSAPVCF 2083
+ I V++RY+ TT RLYLE +NGT RGGCV L QIW +R G K PLYAVD D G VS +ATG WLLTE+LYV+DGITLK++GS AGGD DELRL S N T INLR HGG++D + TKV SWDT N D +E+DGRSYIS +SE ++D +TC+GNAKN MGEARMDI SSE+GYLGY +SESYGLTWKVRGFC+DKSNPE+FDDVNVYGN+YDS+IHH ++G+YT+GH++GDWRRN MH N+GYGFDPHDDSDFLTIHDN VY+NG+HGIIASKRCN VSIQGNEVYGG +TSAGIFLHRS NGDAG+AMLES ++ +S+N FE NKYGVR SVGC +N SNN S+ +Y Y+Y G+D PDV +G SQNNV+ NS +G + +K KE+DG Q +DNVF + ++ F + T+N++ GN G D+ E+KV CF
Sbjct: 40 SDIAVSIRYAGTTARLYLESADNGTTRGGCVTLGQIWESRAG------KGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLST------NETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDNATENLMQGNTGLDDGEFELKVDNDACF 496
BLAST of mRNA_P-littoralis_Contig11.81.2 vs. uniprot
Match: Q7XAJ7_9PHAE (Mannuronan C-5-epimerase n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ7_9PHAE) HSP 1 Score: 565 bits (1455), Expect = 2.080e-188 Identity = 293/468 (62.61%), Postives = 359/468 (76.71%), Query Frame = 2
Query: 644 SGSDTPSLNDPIPKPECNASIPVTMRYSSTTKRLYLEKLENGTRGGCVMLEQIWMARGGGEPEGVKAPLYAVDS-DGAVSANATGIWLLTEDLYVKDGITLKLWGSVAGGDTDELRLKSAPAVDGGNATVINLRGHGGNIDILHTKVVSWDTEANDYDMNESDGRSYISVVSEKLSDPVQTCDGNAKNEMGEARMDIVSSEVGYLGYKNSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNIYDSEIHHNHYGMYTFGHERGDWRRNMMHSNTGYGFDPHDDSDFLTIHDNTVYDNGWHGIIASKRCNNVSIQGNEVYGGGDTSAGIFLHRSXXXXXXXXXXXXXNGDAGMAMLESSDSLISDNVFEANKYGVRMSVGCTNNTVSNNAFSDTLQYALYTYEGSDAPDVQPTGYSQNNVWKANSITGGPQPMKFKESDGNQLIDNVFTNPGIMEFASTTDNVVTGNIGFD 2044
+G DT S N+PIPKPEC+ SI V++RYSS +RLYLE ++ TRGGCV LEQIW + G +APLYAVDS G +S +ATG WLLTE+L+V+DGITLK+ G+ AGGD DELRL S + T INLR HGG++D L TKV +WDT N D +E DGRSY+S VSE ++D QTC+G AKN MGEARMDI SE+GYLGY SESYGLTWKVRGFC DKSN ++F+DVNVYGNIYDS+IHHN++G+YT+GH++GDWRRN MH N+GYGFDPHDDSDFLTIHDN VYDNG+HGIIASKRCN VSIQGNEVYGG +SAGIFLHR XXXXXXXXXXXXX DAG+AM+ES ++ +SDN+FE NKYG+R SVG N NN S + +Y+ Y+Y GSDAPDV +G SQ+NV++ N+I GG + +K ++DG Q IDN F + + F +++GNIG +
Sbjct: 20 AGKDTKSPNEPIPKPECDESIAVSIRYSSVYERLYLESADSKTRGGCVTLEQIWEHQRG------EAPLYAVDSKSGDISDSATGTWLLTEELFVEDGITLKVHGTSAGGDADELRLLST------SDTFINLRAHGGSLDFLSTKVFAWDTSINGPDRDEEDGRSYVSAVSEVITDDSQTCNGRAKNNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHDLFEDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYDNGYHGIIASKRCNGVSIQGNEVYGGATSSAGIFLHRXXXXXXXXXXXXXXXXDAGLAMMESFNADVSDNIFENNKYGIRFSVGSGRNVFFNNVISGSTRYSTYSYLGSDAPDVVDSGRSQDNVFQENNIIGGVESIKLLDADGTQFIDNTFEDATTIRFNDAKKTLMSGNIGLN 475
BLAST of mRNA_P-littoralis_Contig11.81.2 vs. uniprot
Match: Q7XAJ8_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ8_9PHAE) HSP 1 Score: 541 bits (1393), Expect = 1.570e-179 Identity = 272/476 (57.14%), Postives = 344/476 (72.27%), Query Frame = 2
Query: 680 PKPECNASIPVTMRYSSTTKRLYLEKLENGTRGGCVMLEQIWMARGGGEPEGVKAPLYAVD-SDGAVSANATGIWLLTEDLYVKDGITLKLWGSVAGGDTDELRLKSAPAVDGGNATVINLRGHGGNIDILHTKVVSWDTEANDYDMNESDGRSYISVVSEKLSDPVQTCDGNAKNEMGEARMDIVSSEVGYLGYKNSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNIYDSEIHHNHYGMYTFGHERGDWRRNMMHSNTGYGFDPHDDSDFLTIHDNTVYDNGWHGIIASKRCNNVSIQGNEVYGGGDTSAGIFLHRSXXXXXXXXXXXXXNGDAGMAMLESSDSLISDNVFEANKYGVRMSVGCTNNTVSNNAFSDTLQYALYTYEGSDAPDVQPTGYSQNNVWKANSITGGPQPMKFKESDGNQLIDNVFTNPGIMEFASTTDNVVTGNIGFDEATEIKVSAPVCFISTDEAS 2104
PKP+C++SI V++RY++ + RLY+E TRGGCV LEQIW + G +PLYAVD G VS +ATG WLLTE++YV+DGITL++ G AGGD DELRL S + T I+LR +GG++D L TKV +WDT N D +ESDGRSYIS VSE ++D QTC+G AKN MGEARMDI +SE+ YLGY +E+YGLTWKVRGFC DK NPE+FDDVNVYGNIYDS+IHHN++G+YT+GH++GDWRRN MH N+GYGFDPHDDSDFLTIHDN V++NG+HGIIASKRCN VSIQGNEVYGG SAGIFLHRS NGDAG+AMLES ++ +SDN FE NKYGVR+SVGC N S N + + ++ ++Y G+D P+V +G SQ+NV+ N+I GG + + KE+DG Q IDN F + + F T +++GN G ++T +KV F DE+S
Sbjct: 6 PKPDCDSSIAVSVRYNAESARLYIESANGRTRGGCVTLEQIWEQQVDG------SPLYAVDPKSGDVSRSATGTWLLTEEMYVEDGITLQVHGISAGGDADELRLLST------SDTFIHLRAYGGSLDFLSTKVFAWDTSKNAPDQDESDGRSYISAVSEVITDDRQTCNGRAKNNMGEARMDIENSEMAYLGYHGTETYGLTWKVRGFCVDKGNPELFDDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVWNNGYHGIIASKRCNGVSIQGNEVYGGSSGSAGIFLHRSSDNGIVKGNYVHDNGDAGLAMLESFNADVSDNTFENNKYGVRLSVGCGRNIFSKNVITGSAEFNTFSYLGADKPEVVDSGRSQDNVFMENNIIGGVESILLKEADGTQFIDNTFKDAAAIRFVDATKTLMSGNTGLADST-LKVDRGATF---DESS 465
BLAST of mRNA_P-littoralis_Contig11.81.2 vs. uniprot
Match: D7FXE5_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE5_ECTSI) HSP 1 Score: 499 bits (1285), Expect = 1.770e-164 Identity = 247/374 (66.04%), Postives = 293/374 (78.34%), Query Frame = 2
Query: 704 IPVTMRYSSTTKRLYLEKLENGT-RGGCVMLEQIWMARGGGEPEGVKAPLYAVDSD-GAVSANATGIWLLTEDLYVKDGITLKLWGSVAGGDTDELRLKSAPAVDGGNATVINLRGHGGNIDILHTKVVSWDTEANDYDMNESDGRSYISVVSEKLSDPVQTCDGNAKNEMGEARMDIVSSEVGYLGYKNSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNIYDSEIHHNHYGMYTFGHERGDWRRNMMHSNTGYGFDPHDDSDFLTIHDNTVYDNGWHGIIASKRCNNVSIQGNEVYGGGDTSAGIFLHRSXXXXXXXXXXXXXNGDAGMAMLESSDSLISDNVFEANKYGVRMSVGCTNNTVSNNAFSDTLQ 1819
I V++RY+ +T RLYLE +NGT RGGCV L QIW +R G K PLYAVD D G VS +ATG WLLTE+LYV+DGITL+++GS AGGD DELRL S N T INLR HGG++D + TKV SWDT N D +E+DGRSYIS +SE ++D +TC+GNAKN MGEARMDI SSE+GYLGY +SESYGLTWKVRGFC+DKSNPE+FDDVNVYGN+YDS+IHH ++G+YT+GH++GDWRRN MH N+GYGFDPHDDSDFLTIHDN VY+NG+HGIIASKRCN VSIQGNEVYGG +TSAGIFLHRS NGDAG+AMLES ++ +S+N FE NKYGVR SVGC +N SNN S+ +
Sbjct: 42 IAVSIRYAESTARLYLESADNGTTRGGCVTLGQIWESRAG------KGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLEVYGSEAGGDADELRLLST------NETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAE 403
BLAST of mRNA_P-littoralis_Contig11.81.2 vs. uniprot
Match: A8CEP1_SACJA (Mannuronan C-5 epimerase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A8CEP1_SACJA) HSP 1 Score: 493 bits (1268), Expect = 1.680e-160 Identity = 257/479 (53.65%), Postives = 317/479 (66.18%), Query Frame = 2
Query: 650 SDTPSLNDPIPKPECNASIPVTMRYSSTTKRLYLEKLENGTRGGCVMLEQIWMARGGGEPEGVKAPLYAVD-SDGAVSANATGIWLLTEDLYVKDGITLKLWGSVAGGDTDELRLKSAPAVDGGNATVINLRGHGGNIDILHTKVVSWDTEANDYDMNESDGRSYISVVSEKLSDPVQTCDGNAKNEMGEARMDIVSSEVGYLGYKNSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNIYDSEIHHNHYGMYTFGHERGDWRRNMMHSNTGYGFDPHDDSDFLTIHDNTVYDNGWHGIIASKRCNNVSIQGNEVYGGGDTSAGIFLHRSXXXXXXXXXXXXXNGDAGMAMLESSDSLISDNVFEANKYGVRMSVGCTNNTVSNNAFSDTLQYALYTYEGSDAPDVQPTGYSQNNVWKANSITGGPQPMKFKESDGNQLIDNVFTNPGIMEFASTTDNVVTGNIGFDEATEIKVSAPVCF 2083
++T S N I KP C +S V++RYS T+KRLYLE + TRGGCV LE IW GG APLYAV S G VS++ TG WLLTE LYV+DGITL++ G AGG DELRL S + INLR HGG++D + TKV +WDT N ++S GRSYIS VSE ++D Q CDG AK MGEARMDI SE+ YLGY SESYGLTWKVRG C+D SN E+FD VNVYGNIYDS+IHHN++G+YT+GHE+GDWRRN MH NT YGFDPHDDSDFLTIHDN VY+NG HGIIASKRCN G S GIFLHRS NGDAGMA++E+ ++ +S+N FE NKYG+RMSVGC +N S N + + +Y +YTY+GSDAP V +G SQ+ +GG + +K +DG + IDN F + + F +++GN G A+ +KV+ CF
Sbjct: 22 ANTASRNKAIAKPSCKSSTKVSIRYSKTSKRLYLESADGNTRGGCVTLEDIWRDLDGG------APLYAVKPSSGDVSSSITGTWLLTESLYVEDGITLQVHGKSAGGKADELRLLST------SKDFINLRAHGGSLDFVSTKVFAWDTSKNKVRTDDSKGRSYISAVSEVITDSKQKCDGRAKKNMGEARMDIEDSEMAYLGYFGSESYGLTWKVRGLCRDLSNLEVFDAVNVYGNIYDSDIHHNYFGVYTYGHEQGDWRRNKMHHNTEYGFDPHDDSDFLTIHDNEVYNNGNHGIIASKRCNGXXXXXXXXXXGAAKSVGIFLHRSSDDAIVKDNYVHDNGDAGMALMETFNADVSNNKFEDNKYGIRMSVGCADNVFSKNDITGSSKYNVYTYQGSDAPWVVDSGRSQDXXXXXXXXSGGQETVKLTMADGTEFIDNTFKSAKTIRFEDCQGTLMSGNSGLGGAS-LKVTDGSCF 487
BLAST of mRNA_P-littoralis_Contig11.81.2 vs. uniprot
Match: Q7XAK2_9PHAE (Mannuronan C-5-epimerase n=2 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAK2_9PHAE) HSP 1 Score: 485 bits (1248), Expect = 1.750e-157 Identity = 257/479 (53.65%), Postives = 317/479 (66.18%), Query Frame = 2
Query: 650 SDTPSLNDPIPKPECNASIPVTMRYSSTTKRLYLEKLENGTRGGCVMLEQIWMARGGGEPEGVKAPLYAVD-SDGAVSANATGIWLLTEDLYVKDGITLKLWGSVAGGDTDELRLKSAPAVDGGNATVINLRGHGGNIDILHTKVVSWDTEANDYDMNESDGRSYISVVSEKLSDPVQTCDGNAKNEMGEARMDIVSSEVGYLGYKNSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNIYDSEIHHNHYGMYTFGHERGDWRRNMMHSNTGYGFDPHDDSDFLTIHDNTVYDNGWHGIIASKRCNNVSIQGNEVYGGGDTSAGIFLHRSXXXXXXXXXXXXXNGDAGMAMLESSDSLISDNVFEANKYGVRMSVGCTNNTVSNNAFSDTLQYALYTYEGSDAPDVQPTGYSQNNVWKANSITGGPQPMKFKESDGNQLIDNVFTNPGIMEFASTTDNVVTGNIGFDEATEIKVSAPVCF 2083
++T S N I KP C +S V++RYS+++KRLYLE + TRGGCV LE+IW G APLYAV S G VS++ATG WLLTEDLYV+DGITL++ G+ AGG+ +ELRL S + INLR HGG++D + TKV +WDT N + S RSYIS VSE ++D + CDG AK MGEARMDI SE+ YLGY+ SESYGLTWKVRGFCKD SNPE+FD+VNVYGNIYDS+IHHNH+G+YT+GHE+GDWRRN MH N YGFDPHDDSDFLTIHDN V G S GIFLHRS XXXXNGDAGMA++ES ++ +S+N FE NKYGVR+SVGC +N S N SD+ +Y +YTYEGSD P V +G SQ+N++ N+ITGG + +K +DG + IDN F F +++GN G AT +KVS CF
Sbjct: 25 ANTSSKNKAISKPSCKSSTKVSIRYSASSKRLYLESADGKTRGGCVTLEEIWKDLDG------SAPLYAVKPSSGDVSSSATGTWLLTEDLYVEDGITLQVHGTSAGGNANELRLLST------SKDFINLRAHGGSLDFVSTKVFAWDTSKNKVRTDGSKARSYISAVSEIITDSKEKCDGKAKKTMGEARMDIEDSEMAYLGYQGSESYGLTWKVRGFCKDGSNPEVFDEVNVYGNIYDSDIHHNHFGVYTYGHEQGDWRRNKMHHNREYGFDPHDDSDFLTIHDNKVXXXXXXXXXXXXXXXXXXXXXXXXXXGSSKSVGIFLHRSSDDAIVKDNXXXXNGDAGMALMESFNADVSNNKFEDNKYGVRLSVGCADNVFSKNVISDSSKYNVYTYEGSDDPWVVDSGRSQDNIFSDNTITGGDESIKLTMADGTEFIDNTFKRAKTARFEDAETTLMSGNTGLGSAT-LKVSKGACF 490
BLAST of mRNA_P-littoralis_Contig11.81.2 vs. uniprot
Match: A0A6H5K1D5_9PHAE (MEP4b protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1D5_9PHAE) HSP 1 Score: 431 bits (1109), Expect = 5.110e-140 Identity = 195/288 (67.71%), Postives = 241/288 (83.68%), Query Frame = 2
Query: 1244 VGYLGYKNSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNIYDSEIHHNHYGMYTFGHERGDWRRNMMHSNTGYGFDPHDDSDFLTIHDNTVYDNGWHGIIASKRCNNVSIQGNEVYGGGDTSAGIFLHRSXXXXXXXXXXXXXNGDAGMAMLESSDSLISDNVFEANKYGVRMSVGCTNNTVSNNAFSDTLQYALYTYEGSDAPDVQPTGYSQNNVWKANSITGGPQPMKFKESDGNQLIDNVFTNPGIMEFASTTDNVVTGNIGFDEATEIKVSAPVCFISTDEASL 2107
+GY+G+ +SESYGLTWKVRGFCKDKSNPEIFD VNVYGNIYDSE+HH ++ +YT+GH++GDWRRN++HSN+GYG+DPHDDSDFLTIHDN VYDN WHGIIASKRCNNVSIQGN VYGG DTSAGIFLHRS NGDAGMAMLESS++ IS N+FE NKYG+RMSVGC +N V NN ++T QYA+YTY+GSD +VQPTG SQ+N++ +N++ GGPQ +K KESDG ++ +NVF PG++EF++TT+NVVTGN+G ++ATE+++ P CF TDEASL
Sbjct: 1 MGYMGFHDSESYGLTWKVRGFCKDKSNPEIFDQVNVYGNIYDSELHHMNFAVYTYGHQQGDWRRNVVHSNSGYGYDPHDDSDFLTIHDNVVYDNNWHGIIASKRCNNVSIQGNIVYGGNDTSAGIFLHRSSDYAVVKDNHCYGNGDAGMAMLESSNAEISGNIFEGNKYGIRMSVGCRDNFVYNNTMTNTSQYAIYTYQGSDPAEVQPTGRSQDNIFDSNTVVGGPQAIKLKESDGTRITNNVFYEPGVVEFSNTTENVVTGNVGLEDATEVELVEPACFAETDEASL 288
BLAST of mRNA_P-littoralis_Contig11.81.2 vs. uniprot
Match: A0A6H5JU98_9PHAE (MEP5a protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU98_9PHAE) HSP 1 Score: 398 bits (1023), Expect = 1.440e-126 Identity = 194/299 (64.88%), Postives = 235/299 (78.60%), Query Frame = 2
Query: 644 SGSDTPSLNDPIPKPECNASIPVTMRYSSTTKRLYLEKLENGTRGGCVMLEQIWMARGGGEPEGVKAPLYAVDSD-GAVSANATGIWLLTEDLYVKDGITLKLWGSVAGGDTDELRLKSAPAVDGGNATVINLRGHGGNIDILHTKVVSWDTEANDYDMNESDGRSYISVVSEKLSDPVQTCDGNAKNEMGEARMDIVSSEVGYLGYKNSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNIYDSEIHHNHYGMYTFGHERGDWRRNMMHSNTGYGFDPHDDSDFLTIHDNTVYDNGWHG 1537
+ +DT S NDPI KP+C++ I V++RY+S+TKRLYLE + TRGGCV L QIW R G KAPLYAVD + G S N TG WLLTE+LYV+DGITLK++G+ GGD DELRL S T INLR HGG++D + TKV SWDT N D +E+DGRSYIS +SE ++D +TC+GNAKN MGEARMDI +SE+GYLG+++SESYGLTWKVRGFCKDKSNP IFD+VNVYGN+YDS+IHH +G+YT+GH++GDWRRN MH N+GYGFDPHDDSDFLTIHDN VY+NG HG
Sbjct: 26 AAADTASPNDPISKPDCDSDIAVSIRYASSTKRLYLESADGETRGGCVTLGQIWENRAG------KAPLYAVDPESGNESENETGTWLLTEELYVEDGITLKVYGTGEGGDADELRLLST------TDTYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPGIFDEVNVYGNMYDSDIHHMRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGNHG 312 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig11.81.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig11.81.2 >prot_P-littoralis_Contig11.81.2 ID=prot_P-littoralis_Contig11.81.2|Name=mRNA_P-littoralis_Contig11.81.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=587bp MGKKGLRRFTIGALLMLGSISTAASTSSAGDNVGISDQDDVVTITPSPSAback to top mRNA from alignment at P-littoralis_Contig11:438926..448172+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig11.81.2 ID=mRNA_P-littoralis_Contig11.81.2|Name=mRNA_P-littoralis_Contig11.81.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=9247bp|location=Sequence derived from alignment at P-littoralis_Contig11:438926..448172+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig11:438926..448172+ >mRNA_P-littoralis_Contig11.81.2 ID=mRNA_P-littoralis_Contig11.81.2|Name=mRNA_P-littoralis_Contig11.81.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1761bp|location=Sequence derived from alignment at P-littoralis_Contig11:438926..448172+ (Pylaiella littoralis U1_48)back to top |