mRNA_P-littoralis_Contig1.333.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1.333.1 vs. uniprot
Match: D8LI22_ECTSI (Importin subunit alpha n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI22_ECTSI) HSP 1 Score: 741 bits (1912), Expect = 1.060e-261 Identity = 439/594 (73.91%), Postives = 483/594 (81.31%), Query Frame = 3
Query: 69 MPPKSRVSKPLFLENQTDKRRDRAQELRSARRQGVLAKRRKFAYATPTPTATPPAAGGGASSNQRHEPWSRETLSEAIRGVKERPISQVLPYLVELRKLLSLEDPPVEEVVEEGGLAPRLIELLSAPNDEIQTETTWCMTNIASSCTRHTRTILEAAXXXXXXXXXXXXXXXXXXXXXXXXXAGDNDDFRQMLHANGALRPILRLLQHSPSLEIARIAAWAVSNLARGDQTPGRPFLDAAPTFVACLRGGVSFSAAASVGAAA----------GAAMLQLRDEALRVEAAWILAFLTAKETETVSELVRVGMVPALVEALVDSNRQNPLCTPALRTLGNMVSGQEAWADAVMVHKEFLPCLAAVLASKDKSKRVLVKEAAWVASNVAAGRPEHRQALVGLGAPAALISLLQSDQLDLQQEAAHGIWNIVAHDQELLLQASRDDRVMGAYVALVRAQSPPIVRCALSFLQLVCQNVPGGPRIVESAGGLEAIDDVHYSGTADPQLQQAAGAIVNRFFGEDGYESSDEGGDEETDXXXXXXXXXXXXXXXGDA--SAPDILRNPQQQXXXXLQQPLASLGRGSHLTRPAWMN*SPS 1814
MPPK+R SKPL LENQT KRRDRAQELRSARRQGVLAKRR AGG ++ Q+ EPWSRE L AIRGV+ERP+SQVLP+LVELRKLLSLEDPPVEEVVE GGLAPRLIELLS P+DE+Q ETTWC+TNIASS +RHTRTI+ A XXXXXXXXXXXXXXXXXXXXXXXXX DDFR+ML ANGAL P+ RLLQ+ P +EIAR AAWA+SNLARGD+TPG PF+ AAPTFVA LRGGV FSAAA + RDEALRVEAAWILAFLTAKE ETV+ELVRVGMV ALVEALVDS Q+PLCTPALRTLGNMVSG+E WADAVM+H EFLPCL AVL S+D+S+RVLVKEAAWVASNVAAGR EHR+ALV G+PAAL LL SDQLDLQQEAAHGIWNIVAHD ELLLQA++DDRVMGAYVALVRAQSPP+VRCALSFLQLVCQNVPGGPR+VESAGGLEAIDDVHYSG ADP+LQ+AAGAIV+RFFG+DGYESSDEGGDEETD G + ++ + R P QXXXX Q PLA LGRG+HLTRP+WMN +PS
Sbjct: 1 MPPKNRESKPLLLENQTHKRRDRAQELRSARRQGVLAKRR--------------VAGGASAQGQQEEPWSRERLESAIRGVRERPVSQVLPFLVELRKLLSLEDPPVEEVVEGGGLAPRLIELLSTPHDEVQLETTWCLTNIASSYSRHTRTIVGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDFRRMLRANGALLPMFRLLQNPPLIEIARTAAWAISNLARGDETPGEPFVQAAPTFVASLRGGVRFSAAAXXXXXXXXXXXXXXXXAPPFVPPRDEALRVEAAWILAFLTAKEEETVTELVRVGMVTALVEALVDSGGQDPLCTPALRTLGNMVSGKEEWADAVMLHNEFLPCLDAVLKSQDRSRRVLVKEAAWVASNVAAGRREHREALVAQGSPAALTLLLLSDQLDLQQEAAHGIWNIVAHDSELLLQAAKDDRVMGAYVALVRAQSPPVVRCALSFLQLVCQNVPGGPRMVESAGGLEAIDDVHYSGQADPELQEAAGAIVDRFFGDDGYESSDEGGDEETDTETVVGGGDGFGFNFGGSGDTSQNGARGPPGQXXXXXQ-PLAPLGRGAHLTRPSWMNQNPS 579
BLAST of mRNA_P-littoralis_Contig1.333.1 vs. uniprot
Match: A0A835YTV7_9STRA (Importin subunit alpha n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTV7_9STRA) HSP 1 Score: 286 bits (731), Expect = 1.140e-84 Identity = 216/595 (36.30%), Postives = 303/595 (50.92%), Query Frame = 3
Query: 93 KPLFL-ENQTDKRRDRAQELRSARRQGVLAKRRKFAYATPTPTATPPAAGGGASSNQRHEPWSRETLSEAIRGVKERPISQVLPYLVELRKLLSLE-DPPVEEVVEEGGLAPRLIELLSAPNDEIQTETTWCMTNIASSCTRHTRTILEAAXXXXXXXXXXXXXXXXXXXXXXXXXAGDNDDFRQMLHANGALRPILRLL----QHSP---SLEIARIAAWAVSNLARGDQTPGRPFLDAAPTFVACLRGGVSFSAAASVGAAAGAAMLQLRDEALRVEAAWILAFLTAKETETVSELVRVGMVPALVEALVDSNRQNPLC----------TPALRTLGNMVSGQEAWADAVMVHKEFLPCLAAVLASKDKSKRVLVKEAAWVASNVAAGRPEHRQALVGLGAPAALISLLQSDQLDLQQEAAHGIWNIVAHD------QELLLQASRDDRVMGAYVALVRAQSPPIVRCALSFLQLVCQNVPGGPRIVESAGGLEAIDDVHYSGTADPQLQQAAGAIVNRFFGEDGYESSDEGGDEETDXXXXXXXXXXXXXXXGDASAPDILRNPQQQXXXXLQQPLASLGRGSHLTRPAWMN 1802
KP+ E+QT +RR+RA++L + +R G LAKRR+ P++ AA A S E ++ L EA+ G+ P LP+L LRK+LS E DPP++ V++ G + PRL+ LL P+D + + C+ NI S T +L+AA AGD R +L A GA+ I R+L +H+ S +A +AAWA+ NLARG+ PF A+ F + A +G A GA R E EAAW LAFLTA+E V +L+ +G+VPALV+ L + + TPALRTLGN+ +G +AW ++ +FLP LA V+AS+D + +VKEAAW+ S++ G R A++ G + LL+S Q DLQ+EAA +WNIVA Q+ L + + V+ A+VAL+R V ALS+++LVC+ VP G R VE AGGLEAID++HY G DP + A AIV++FFGED E S A AP + + +GRG HLT PAWM+
Sbjct: 10 KPMLAPESQTHRRRERAKQLSAIKRDGALAKRRRSLE----PSSVAMAADEEAPSTAAAE-YTEAELKEALAGLAGPPAG-ALPHLAALRKMLSSEEDPPIQAVIDAGAV-PRLLALLEHPDDRYKLDAVRCIANIGSGDRHATSHVLDAAPALIALLHAPSPALVEDALWALGNIAGDVQTSRDVLSAQGAVPAITRVLAAQTRHAATRSSAPLAAVAAWALGNLARGEGASALPF-GASGAFAPLV---------ALLGVAPGAGE---RGENAAAEAAWALAFLTAREDACVEQLLGLGVVPALVDLLARGTQDHSSAKESAAAVAAMTPALRTLGNLAAGPDAWVAQLLSQPKFLPSLAQVVASQDPTHHAMVKEAAWLVSSLVGGHASCRDAVLAAGFLVPTLDLLRSGQFDLQREAARAVWNIVADAANSAGAQQALQAVTAEPGVLAAFVALLRVPDMETVAVALSYVRLVCERVPEGSRAVERAGGLEAIDELHY-GPVDPAISAQAAAIVDKFFGEDYEEDS---------------------TAQPAAPAPADIGH--------------GMGRGKHLTEPAWMH 548
BLAST of mRNA_P-littoralis_Contig1.333.1 vs. uniprot
Match: A0A7S0HZ05_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HZ05_9CRYP) HSP 1 Score: 169 bits (428), Expect = 2.390e-42 Identity = 129/432 (29.86%), Postives = 209/432 (48.38%), Query Frame = 3
Query: 276 SRETLSEAIRGVKE---RPISQVLPYLVELRKLLSLEDPPVEEVVEEGGLAPRLIELLSAPNDEIQTETTWCMTNIASSCTRHTRTILEAAXXXXXXXXXXXXXXXXXXXXXXXXXAGDNDDFRQMLHANGALRPILRLLQHSPSLEIARIAAWAVSNLARGDQTPGRPFLDAAPTFVACLRGGVSFSAAASVGAAAGAAMLQLRDEA-------LRVEAAWILAFLTAKETETVSELVRVGMVPALVEALVDSNRQNPLCTPALRTLGNMVSGQEAWADAVMVHKEFLPCLAAVLASKDKSKRVLVKEAAWVASNVAAGRPEHRQALVGLGAPAALISLLQSDQLDLQQEAAHGIWNIVAHDQELLLQASRDDRVMGAYVALVRAQSPPIVRCALSFLQLVCQNVPGGPRIVESAGGLEAIDDVHYSGTAD 1541
S E + E ++G +E R L LR +LS++D + G LI+ + E E WC+TNIA+ HTR + AA AG++++ R + ANGA+ PI+ L+ ++E+ +I+AWA+SN RG + FL VG A +L +D + L VEA W+L+ LT + + L +VG LV+ L Q L PALR +GNM+ G + D ++ H L L A+L + +K+ L+KEA+WV SNVAAG+P HR A++ G L +LQ+ D+++EAA +++++ HD Q + + +V L+RA P +V AL+ + + + GGPR+ E A G++A++ + Y+ +++
Sbjct: 42 SPEEVKEMVKGCEEAAERGGEDARARLKSLRTVLSMQDDELISYAVGAGAIDVLIKYIRGKCGECILEAAWCITNIATGTLEHTREAMRAAPDLIMLIDSPDPRIQEQCIWALGNMAGEDEECRNTIRANGAITPIMEKLK-CRTMEVQKISAWALSNFMRGHDAHVQEFLSL------------------GVGDAVVGIILGQQDVSSSHPAVELMVEAVWLLSILTHNQEHFGTHLCQVGATSRLVQFLNSGVVQ--LEMPALRCIGNMICGPDEITDHLLSHPACLKQLHAMLRTGNKA---LMKEASWVLSNVAAGKPTHRAAMMEEGMQKTLFHILQTSHFDIRKEAAFALFHLL-HDPAYT-QTLFNRELATEFVGLLRAPDPQVVDMALTVAERILATMEGGPRLFEEADGIDALEQLIYANSSE 447
BLAST of mRNA_P-littoralis_Contig1.333.1 vs. uniprot
Match: A0A7S4L2U6_GUITH (Importin subunit alpha n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4L2U6_GUITH) HSP 1 Score: 166 bits (420), Expect = 5.770e-41 Identity = 126/446 (28.25%), Postives = 214/446 (47.98%), Query Frame = 3
Query: 282 ETLSEAIRGVKERPISQVLPYLVELRKLLSLEDPPVEEVVEEGGLAPRLIELLSAPNDEIQTETTWCMTNIASSCTRHTRTILEAAXXXXXXXXXXXXXXXXXXXXXXXXXAGDNDDFRQMLHANGALRPILRLLQHSPSLEIARIAAWAVSNLARGDQTPGRPFLDAAPTFVACLRGGVSFSAAASVGAAAGAAMLQLRDEA--------LRVEAAWILAFLTAKETETVSELVRVGMVPALVEALVDSNRQNPLCTPALRTLGNMVSGQEAWADAVMVHKEFLPCLAAVLASKDKSKRVLVKEAAWVASNVAAGRPEHRQALVGLGAPAALISLLQSDQLDLQQEAAHGIWNIVAHDQELLLQASRDDRVMGAYVALVRAQSPPIVRCALSFLQLVCQNVPGGPRIVESAGGLEAIDDVHYSGTADPQLQQAAGAIVNRFFGED 1595
E + + G + L LR +LS++D + G L++ + E E WC+TNIA+ HTR + +A AG+++ R + ANGA+RPI+ L + +E+ +I+AWA++NL RG P LD F A G V ++ ++E L VE W+L+ LT + + L +VG+ LV L Q L PALR +GNM+ G + D ++ H L L +L + +K L+KEA WV SN+AAG+ HR A++ G A+LI +L++ D+++EAA +++++ HD + + +V L+RA P +V AL+ + + + GGPR+ E A G++A++ + Y+ ++ + +++ +V+++FGED
Sbjct: 65 EAIVRSCEGALNKGGDDARRCLKSLRTVLSMQDDDLISYAVGAGAVDMLLKYIKGNCGECILEAAWCITNIATGSLEHTRDAMRSAPDLIMLIDSPDPRIQEQCIWALGNMAGEDEQCRDTIRANGAIRPIINKL-NGRMVEVQKISAWALANLMRGQD----PKLD---EFFAMGLGEVVVE------------LILTQEEVPSSHASSELMVEVVWLLSILTHNQEKFALHLCQVGVASKLVRYLESGMAQ--LEMPALRCIGNMICGPDEITDHLLSHPACLKQLHVMLQTGNKG---LMKEATWVLSNIAAGKANHRAAMMEEGVHASLIVILKTSHFDIRKEAAFALFHLL-HDPAYTPTLFTPE-LATEFVGLLRAPDPQVVDMALTVAERILATMEGGPRLFEEADGIDALEQLIYANSSQAVVARSS-FLVDKYFGED 482
BLAST of mRNA_P-littoralis_Contig1.333.1 vs. uniprot
Match: A0A2K1J1Y0_PHYPA (Importin subunit alpha n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1J1Y0_PHYPA) HSP 1 Score: 166 bits (421), Expect = 1.170e-40 Identity = 134/450 (29.78%), Postives = 217/450 (48.22%), Query Frame = 3
Query: 300 IRGVKERPISQVLPYLVELRKLLSLEDPPVEEVVEEGGLAPRLIELLSAPNDEIQT-ETTWCMTNIASSCTRHTRTILEAAXXXXXXXXXXXXXXXXXXXXXXXXX-AGDNDDFRQMLHANGALRPILRLLQHSPSLEIARIAAWAVSNLARGDQTPGRPFLDAAPTFVACLRGGVSFSAAASVGAAAGAAMLQLRDEALRVEAAWILAFLTAKETETVSELVRVGMVPALVEALVDSNRQNPLCTPALRTLGNMVSGQEAWADAVMVHKEFLP-----CLAAVLASKDKSKRVLVKEAAWVASNVAAGRPEHRQALVGLGAPAALISLLQSDQLDLQQEAAHGIWNIVAHDQE-------LL--LQASRDDRVMGAYVALVRAQSPPIVRCALSFLQLVCQNVPGG--PRIVESAGGLEAIDDVHYSGTADPQLQQAAGAIVNRFFGED 1595
++ + ++ + + L LR+LLS P V + G+ P L++ L E Q E WC+TNIAS TR + A AG+ +D R L GAL + R L SP + + R AAWA+SNL +G + L V L ++ D+ L VE AW+L ++T+ S+L+ G++P LV L S+ Q PL TP LRT+GN+V+ + DAV+ + LP LA +L + R L KEAAWV SN+AAG H++A+ GA + L+ LL + D+++EAA+ + N+ ++ +L L D + ++ALV++ R L FL+LV + +P G P++VE G+ A++++ + A+ +L+ + +++++FGED
Sbjct: 93 LKNIGKKATPKKVEALQTLRRLLSCSAYPPVHVAVQAGVVPLLVDCLGFGASEDQLFEAAWCLTNIASGDPEQTRAVEPALPLLILHLGEKNPARVVEQCAWALGNVAGEAEDLRDWLLRQGALSALARNLS-SPIITLVRTAAWALSNLIKGPNSRAATELMKMDGIVDTL-----------------VRLVSNGDDELVVEVAWVLVYVTSMSDLHSSQLIHAGLLPPLVARLAVSHHQ-PLLTPVLRTIGNIVASDNSKCDAVLAAGQSLPGGINGALARIL---ETEHRTLQKEAAWVVSNLAAGSILHKRAVFNGGAVSPLLYLLATSTFDVRKEAAYALGNLCVAPRDQGEEGKPILEHLNVLVDRGCLMGFIALVKSPDLESARLGLQFLELVMRALPDGKGPKLVEKLDGIAAMEELQFH--ANEELRIMSNMLIDQYFGED 518
BLAST of mRNA_P-littoralis_Contig1.333.1 vs. uniprot
Match: A0A3S6N0U7_9SPER (Importin subunit alpha n=19 Tax=Cupressaceae TaxID=3367 RepID=A0A3S6N0U7_9SPER) HSP 1 Score: 162 bits (411), Expect = 1.810e-39 Identity = 136/455 (29.89%), Postives = 221/455 (48.57%), Query Frame = 3
Query: 282 ETLSEAIRGVKERPISQVLPYLVELRKLLSLEDPPVEEVVEEGGLAPRLIELLS--APNDEIQTETTWCMTNIASSCTRHTRTILEAAXXXXXXXXXXXXXXXXXXXXXXXXX-AGDNDDFRQMLHANGALRPILRLLQHSPSLEIARIAAWAVSNLARGDQTPGRPFLDAAPTFVACLRGGVSFSAAASVGAAAGAAMLQLRDEALRVEAAWILAFLTAKETETVSELVRVGMVPALVEALVDSNRQNPLCTPALRTLGNMVSGQEAWADAVMVHKEFLP--CLAAVLASKDKSKRVLVKEAAWVASNVAAGRPEHRQALVGLGAPAALISLLQSDQLDLQQEAAHGIWNI-VAHDQE----------LLLQASRDDRVMGAYVALVRAQSPPIVRCALSFLQLVCQNVPG--GPRIVESAGGLEAIDDVHYSGTADPQLQQAAGAIVNRFFGE 1592
E L +R + + L LR+LLS P E+ + G+ P L++ LS + N+++ E WC+TNIA+ TR +L A AG+ ++FR +L A GAL P+ RLL + +R AAWA+SNL +G P AA + +S A V +Q DE L E AWI+ +LTA L+ G++P LV L S+ Q L TP LR++GN+V+G DAV+ +P + A++ + R L KEAAW SN+AAG H+Q + GA ++L+ LL + D+++E A+ + N+ VA +E L + +R R + + L+++ + L FL+LV +++P GP++VE+ G+ A++ + + +++ A +V+++FGE
Sbjct: 86 EELKSVASFTGKRSFQEKMEVLCRLRRLLSQTSMPPVEIAVQAGVVPILVQCLSFGSANEQLL-EAAWCLTNIATGDVDQTRALLPALPLLIAHLGEKSSIPVAEQCAWALGNVAGEGEEFRDILLAQGALPPLARLLLSNKG-STSRTAAWALSNLIKG------PKPKAAAELIK-----ISGIPEAIV------RHMQKGDEELATEVAWIVVYLTALSEMHSGLLIEAGLLPPLVGRLASSD-QLSLLTPVLRSIGNLVAGDNRKTDAVLAAGNDIPGSVVGAMIKCLESQHRTLKKEAAWALSNIAAGTLVHKQLIFSSGAVSSLLHLLVTATFDIRKEVAYVLGNLCVATVEETGESMTILEHLTVLVNR--RCLPGLINLIKSPDIEAAKLGLQFLELVMRSLPNDQGPKLVENEDGIAAMELFQFH--ENEEIRNMANGLVDKYFGE 516
BLAST of mRNA_P-littoralis_Contig1.333.1 vs. uniprot
Match: A0A7S2BA76_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BA76_9STRA) HSP 1 Score: 152 bits (385), Expect = 8.160e-38 Identity = 105/314 (33.44%), Postives = 168/314 (53.50%), Query Frame = 3
Query: 870 LQLRDEALRVEAAWILAFLTAKETETVSELVRVGMVPALVEALVDSNRQNPLCTPALRTLGNMVSGQEAWADAVMVHKEFL-PCLAAVL--ASKDKSKRVLVKEAAWVASNVAAGRPEHRQALVGLGAPAALISLLQSDQLDLQQEAAHGIWNIVAHDQELLLQASRDDRVMGAYVALVRAQSPPIVRCALSFLQLVCQNVPG-GPRIVESAGGLEAIDDVHYSGTADPQLQQAAGAIVNRFFGEDGYESSDEGGDEETDXXXXXXXXXXXXXXXGDASAPDILRNPQQQXXXXLQQPLASLGRGSHLTRPAWM 1799
L DE++ E AW+L FL A+ E + +V +G+VPALV AL SN NP+ TPALR +GN+VS E++A V+ L P + ++ + + R L+KEA W SN+AAG P H + ++ P L++LL + + D+Q+EA + N+++ + + + V+ +AL+R ++ C+L+ + ++ + P P IVE AGGLEAIDD+HY +D +++ A ++V+ ++G++ YE + G D G +R PQ Q P LGRG + RPAWM
Sbjct: 20 LSYEDESVVAEVAWVLVFLVARSDEAAAAIVTLGVVPALVTALHKSNATNPVATPALRIIGNLVSIGESFATTVLEQSTLLLPLMKRIVDGSGGTATPRGLLKEAVWTMSNMAAG-PVHHRTMMANFLPD-LLTLLNTGKFDVQREALFAVRNLMS--DPACVAFALGNGVLPPCIALLRTHDHDVILCSLTVIGVILKTSPSTAPTIVEDAGGLEAIDDLHYGDVSD-DVRELAASLVDTYYGDE-YEPTQSGDD----------------GRQGQLMQFSDVRGPQAQ-------PQGGLGRGRDINRPAWM 304
BLAST of mRNA_P-littoralis_Contig1.333.1 vs. uniprot
Match: A0A843UGE6_COLES (Uncharacterized protein n=1 Tax=Colocasia esculenta TaxID=4460 RepID=A0A843UGE6_COLES) HSP 1 Score: 154 bits (389), Expect = 3.620e-37 Identity = 134/453 (29.58%), Postives = 213/453 (47.02%), Query Frame = 3
Query: 306 GVKERPISQVLPYLVELRKLLSLED-PPVEEVVEEGGLAPRLIELLSAPN-DEIQTETTWCMTNIASSCTRHTRTILEAAXXXXXXXXXXXXXXXXXXXXXXXXX-AGDNDDFRQMLHANGALRPILRLLQHSPSLEIARIAAWAVSNLARGDQTPGRPFLDAAPTFVACLRGGVSFSAAASVGAAAGAAMLQLR--DEALRVEAAWILAFLTAKETETVSELVRVGMVPALVEALVDSNRQNPLCTPALRTLGNMVSGQEAWADAVMV--HKEFLPCLAAVLASKDKSKRVLVKEAAWVASNVAAGRPEHRQALVGLGAPAALISLLQSDQLDLQQEAAHGIWN--------------IVAHDQELLLQASRDDRVMGAYVALVRAQSPPIVRCALSFLQLVCQNVPGG--PRIVESAGGLEAIDDVHYSGTADPQLQQAAGAIVNRFFGED 1595
G + + + + L LR+LLS + PPVE ++ G + P L++ LS + DE E WC+TN+A+ TR++L A AG+ +D R L A G L P+ R++ + AR AAW +SNL +G P AA + + A + LR +E L E AW++ +L+A S LVR V LVE L ++ PALR+LGN+VSG ++V+V H+ L A++ RVL KEAAWV SN+A G EH+Q + A L+ LL S D+++EAA+ + N I+ H +L+ + + ++ LVR+ R L FL+LV + +P G P++VE G++A++ + + +++ A +V+++FG+D
Sbjct: 5 GEGKGTVRKKIEVLRSLRRLLSKSEIPPVEAAIQAGAI-PVLVQCLSFGSPDEQLLEAAWCLTNVAAGEPEQTRSLLPALPLLIAHLGEKSSVPVAEQCAWALGNVAGEGEDLRNTLLAQGVLLPLARMMMSNKG-STARTAAWVLSNLIKG------PNPKAATELI-------------KIDGVMDAILRHLRKGEEELATEVAWVVVYLSALSQIATSMLVRSDAVQLLVERL-EAXXXXXXXIPALRSLGNLVSGDSYTTNSVLVVGHEITDKVLLAIIKCMKTEHRVLKKEAAWVLSNIAVGSLEHKQLIYTSEATLLLLHLLSSAPFDIRKEAAYTLGNLCVTPSDGCGPPNIILPHLAQLVNRGC-----LPGFINLVRSPDIDAARLGLQFLELVMRGLPNGEGPKLVEREDGIDAMERFQFH--ENEEIRNMANGLVDKYFGQD 428
BLAST of mRNA_P-littoralis_Contig1.333.1 vs. uniprot
Match: A0A0D6R435_ARACU (Importin subunit alpha n=1 Tax=Araucaria cunninghamii TaxID=56994 RepID=A0A0D6R435_ARACU) HSP 1 Score: 155 bits (392), Expect = 6.930e-37 Identity = 128/457 (28.01%), Postives = 210/457 (45.95%), Query Frame = 3
Query: 282 ETLSEAIRGVKERPISQVLPYLVELRKLLSLEDPPVEEVVEEGGLAPRLIELLSAPN-DEIQTETTWCMTNIASSCTRHTRTILEAAXXXXXXXXXXXXXXXXXXXXXXXXX-AGDNDDFRQMLHANGALRPILRLLQHSPSLEIARIAAWAVSNLARGDQTPGRPFL---DAAPTFVACLRGGVSFSAAASVGAAAGAAMLQLRDEALRVEAAWILAFLTAKETETVSELVRVGMVPALVEALVDSNRQNPLCTPALRTLGNMVSGQEAWADAVMVHKEFLP--CLAAVLASKDKSKRVLVKEAAWVASNVAAGRPEHRQALVGLGAPAALISLLQSDQLDLQQEAAHGIWNIVAHD-----------QELLLQASRDDRVMGAYVALVRAQSPPIVRCALSFLQLVCQNVPGG--PRIVESAGGLEAIDDVHYSGTADPQLQQAAGAIVNRFFGE 1592
E L A + + + L LR+LLS P EV G+ P L++ LS + DE E WC+TNIA+ T+ +L A AG+ ++FR +L A GAL + RL+ + AR AAWA+SNL +G + L + P + +Q DE L E AW++ +LTA L+ G++P L+ L S+ Q L TP LR++GN+V+G DAV+ + +P + A++ + R L KEAAW SN+AAG H+Q + GA + L+ LL + D+++E A+ + N+ + L + +R + ++ L+++ + L FL+LV + +P G PR+VE+ G+ A++ + + +L+ A +V+++FGE
Sbjct: 86 EELKSAASLTGKGAYQKKMEVLRRLRRLLSQTSIPPVEVAVHAGVVPVLVQCLSFGSADEQLLEAAWCLTNIATGELEQTQALLPALPMLIAHLGEKSSIPVAEQCAWAVGNVAGEGEEFRDILLAQGALPSLARLMLSNKG-STARTAAWALSNLIKGPKPKAAVELVKMNGIPEVIV--------------------RHMQKGDEELATEVAWVVVYLTALSEMQSGLLITAGLLPPLIGRLASSD-QLALLTPVLRSIGNLVAGDNHKLDAVIAAGQDIPGSVIGAMIKCLESEHRTLKKEAAWALSNIAAGTVVHKQLIFSSGAVSPLLHLLATATFDIRKEVAYVLGNLCVATVGKTGETVPILEHLTVFVNRG--CLRGFINLIKSPDTEAAKLGLQFLELVMRGLPNGQGPRLVEAEDGIAAMELFQFH--ENEELRNMANGLVDKYFGE 516
BLAST of mRNA_P-littoralis_Contig1.333.1 vs. uniprot
Match: A0A388K6S0_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388K6S0_CHABU) HSP 1 Score: 154 bits (388), Expect = 9.280e-36 Identity = 133/452 (29.42%), Postives = 212/452 (46.90%), Query Frame = 3
Query: 381 PPVEEVVEEGGLAPRLIELLSAPNDEIQ-TETTWCMTNIASSCTRHTRTILEAAXXXXXXXXXXXXXXXXXXXXXXXXX-AGDNDDFRQMLHANGALRPILRLLQHSPSLEIARIAAWAVSNLARGDQTPGRPFLDAAPTFVACLRGGVSFSAAASVGAAAGAAMLQLRDEALRVEAAWILAFLTAKETETVSELVRVGMVPALVEALVDSNRQNPLCTPALRTLGNMVSGQEAWADAVMVHKEFLP--CLAAVLASKDKSKRVLVKEAAWVASNVAAGRPEHRQALVGLGAPAALISLLQSDQLDLQQEAAHGIWNI-----------------VAHD------QELLLQASR------------------DDRVMGAYVALVRAQSPPIVRCALSFLQLVCQNVPG--GPRIVESAGGLEAIDDVHYSGTADPQLQQAAGAIVNRFFGED 1595
PPV V G+ P LIE L + E Q E WC+TNIAS + +T L AA AG+ + R +L ANGALRP+ RL+ +AR +AW +SNL +G P AA + +RG + +A L D L VE AW+L ++T+ V L+ G++P L+ LV ++ L TP +RT+GN+V+G+ + DAV+V +P + ++ + R+L KEAAWV SN+A G H++A+ GA L+ LL + D+++E A+ I N+ V H +E+ + A+ D + ++ALVR+ + L FL+LV + +P GP++VE G+EA++ + ++ +L+ + ++++FFGED
Sbjct: 160 PPVTPAVR-AGVIPLLIECLKFGSREEQLVEAAWCVTNIASGDSENTVAALAAAPLLIAHLGDKSPMPVAEQCAWALGNMAGEGPEVRAVLLANGALRPLARLMGVMRPSSVARTSAWVMSNLIKG------PDPSAAMELMK-VRGMMELLISA----------LSKGDTDLVVEVAWVLTYVTSMLDPQVPRLIEAGLLPPLLRHLVSASTPG-LLTPVVRTIGNIVAGENSRTDAVLVAGAEIPGGLIGGLVRCLESEHRILQKEAAWVLSNIAGGTVAHKEAVFSGGAMPPLLHLLATAAFDVRKEVAYVIGNVCVMPAAAXXXXXXVATKVGHSPSAGEVEEMAMAAAAAHNPSQPDVLVNHLVSVVDRGCVPGFIALVRSLDIEAAKLGLQFLELVLRAMPDRRGPQVVEKEDGIEAMESLQNH--SNDELRAMSNHLIDKFFGED 590 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1.333.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1.333.1 >prot_P-littoralis_Contig1.333.1 ID=prot_P-littoralis_Contig1.333.1|Name=mRNA_P-littoralis_Contig1.333.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=579bp MPPKSRVSKPLFLENQTDKRRDRAQELRSARRQGVLAKRRKFAYATPTPTback to top mRNA from alignment at P-littoralis_Contig1:1500306..1505728- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1.333.1 ID=mRNA_P-littoralis_Contig1.333.1|Name=mRNA_P-littoralis_Contig1.333.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=5423bp|location=Sequence derived from alignment at P-littoralis_Contig1:1500306..1505728- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1:1500306..1505728- >mRNA_P-littoralis_Contig1.333.1 ID=mRNA_P-littoralis_Contig1.333.1|Name=mRNA_P-littoralis_Contig1.333.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1737bp|location=Sequence derived from alignment at P-littoralis_Contig1:1500306..1505728- (Pylaiella littoralis U1_48)back to top |