mRNA_P-littoralis_Contig1.278.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1.278.1 vs. uniprot
Match: D7FT44_ECTSI (PA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT44_ECTSI) HSP 1 Score: 488 bits (1257), Expect = 4.650e-168 Identity = 253/376 (67.29%), Postives = 298/376 (79.26%), Query Frame = 3
Query: 381 LRSHFGGPAVEGMRPVVLADPLDACEPLRNVDSIVSAVVIVTRGTCTYTTKARNAQQAAANALLIVNNGQGLLHPPGPDGMDLDIFSAMIPQAEGTALIETVV-KNDPVQGALVPMNCNKHGGIGDKNQQCLAAVKADRDLVDGLALGGFVHLPGGEKFEYLLAEFGVKVPSGGLMLDGSPDPPGTACNPLTKEAADAAVGKAVLATRGECSFLEKAESMGAGGPSGRVGALIIANDDTSLFHMGASPRWRGAKVSFPTVLVSDIAGHALANLPPESTIRFTPSQDVTMAAWDEIGHLKEVSAWPADTQKRQRMYETLVAGNTAFPDRTSAVRAAFSAV-SGGDRG-GAAGRTVETGRDDAEWQDAVNSDATSASI 1499
+RSHFGGP +GMR +VLADPLD C+PLRNVD SAVVI TRG+CTYT KARNAQ+A+A+ALL+VNN QGLLHPPGPDGMDL+IFS MIPQ EG ALIE + +DP QGALVPMNCNK GIG NQQC AA KADRD+VDGL LGGFVHLPGG+KFEYLLA FGVKVP G L + G+P P AC P+ KEAA AAVGKA++ATRGECSF+EKAE+MGAG P RVGALI+ N +T+LFHMGA+PRWRGA +S P VLV+D+AGHA++ LPP+STIRF PS+ VT+AAWDEI LKE S WP +TQ+RQ +YETLV N FPDR SA++ AFS V S G+ G G AG+ G DAE ++ ++D TS +
Sbjct: 17 IRSHFGGPPADGMRRLVLADPLDGCKPLRNVDDARSAVVIATRGSCTYTNKARNAQEASASALLVVNNEQGLLHPPGPDGMDLEIFSGMIPQPEGRALIEAMSGSSDPTQGALVPMNCNKKSGIGSSNQQCHAAAKADRDIVDGLTLGGFVHLPGGDKFEYLLAGFGVKVPLGELEM-GAPLNPSGACAPMPKEAATAAVGKAIVATRGECSFIEKAEAMGAG-PGERVGALIVKNSETALFHMGAAPRWRGANISLPIVLVTDVAGHAISTLPPDSTIRFAPSEHVTLAAWDEIERLKEASVWPKETQERQTLYETLVTRNAGFPDRVSAIQGAFSRVCSWGEEGEGIAGQ----GGGDAERRETGDADTTSVKL 386
BLAST of mRNA_P-littoralis_Contig1.278.1 vs. uniprot
Match: A0A6H5KP66_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP66_9PHAE) HSP 1 Score: 342 bits (876), Expect = 6.920e-112 Identity = 185/294 (62.93%), Postives = 217/294 (73.81%), Query Frame = 3
Query: 645 MIPQAEGTALIETVV-KNDPVQGALVPMNCNKHGGIGDKNQQCLAAVKADRDLVDGLAL------GGFVHLPGGEKFEYLLAEFGVKVPSGGLMLDGSPDPPGTACNPLTKEAADAAVGKAVLATRGECSFLEKAESMGAGGPSGRVGALIIANDDTSLFHMGASPRWRGAKVSFPTVLVSDIAGHALANLPPESTIRFTPSQDVTMAAWDEIGHLKEVSAWPADTQKRQRMYETLVAGNTAFPDRTSAVRAAFSAVSGGDRG--GAAGRTVETGRDDAEWQDAVNSDATSASI 1499
MIPQ EG ALIE + +DP QGALVPMNCNK GIG NQQC AA KADRD+VDGL L GGFVHLPGGEKFEYLLA FGVKVP G L + G+P P AC P+ KEAA AA GKA++ATRG CSFLEKAE+MGAG P RVGALI+ N +T+LFHMGA+PRWRGA +S P VLV+D+AGHA++ LPP+STIRF PS+ VT+AAWDEI L E SAWP +TQ+RQ +YETLVA N FPDR SA++ AFS V D G AG+ V DAE ++ ++D TS +
Sbjct: 1 MIPQPEGRALIEAMSGSSDPTQGALVPMNCNKKSGIGSSNQQCHAAAKADRDIVDGLTLVRGQGTGGFVHLPGGEKFEYLLAGFGVKVPLGELEM-GAPLNPSGACAPMPKEAATAAAGKAIVATRGACSFLEKAEAMGAG-PGERVGALIVKNSETALFHMGAAPRWRGANISLPIVLVTDVAGHAISTLPPDSTIRFAPSEHVTLAAWDEIERLNEASAWPKETQERQTLYETLVARNAGFPDRVSAIQGAFSRVCSWDEEEEGIAGQGVG----DAERRETGDADTTSVKL 288
BLAST of mRNA_P-littoralis_Contig1.278.1 vs. uniprot
Match: A0A7S2CH50_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CH50_9STRA) HSP 1 Score: 265 bits (676), Expect = 3.290e-79 Identity = 163/462 (35.28%), Postives = 247/462 (53.46%), Query Frame = 3
Query: 36 VVALVLLILGR-HVGSSAQVRNDKGFELREPRKESI--TLNQEERHKYIHDGKEY-NRPPNLFDVGDGELKLLPEVLSGLSFET--RDFKDDGTAAEQKELRDTRPWGRLHVDGWPAPIQYLRSHFGGPAVEGMRPVVLADPLDACEP-LRNVDSI--VSAVVIVTRGTCTYTTKARNAQQAAANALLIVNNGQGLLHPPGPDGMDLDIFSAMIPQAEGTALIETVVKNDPVQGALVPMNCNKHGGIGDKNQQCLAAVKADRDLVDGLALGGFVH-LPGGEKFEYLLAEFGVKVPSGGLMLDGSPDPPGTACNPLTK--EAADAAVGKAVLATRGECSFLEKAESMGAGGPSGRVGALIIANDDTSLFHMGASPRWRGAKVSFPTVLVSDIAGHALANLPPESTIRFTPSQDVTMAAWDEIGHLKEVSAWPADTQKRQRMYETLVAGNTAFPDRTSAVRAAF 1385
+ AL L++ R G A+V+ + + R P K + ++ E+ ++I +E+ + PN F VG+ E+ +LPEV S L +DF +G AAE++ R +R WGRL++DGWP +QY+R+HFG P G+RP++LADP DAC L N + I A+V+ RGTCT+ TK +N + AL+IVNN G +H PGPD DL + +M+ + EG LI ++ K + A+VP++C C + +ADR + + + GG+V LPG K EYL A FG K+P+ PP ACN ++ + A+ GKAV+ RG C FLEKA S +II N +TS+ G PRW+G KV P ++V+D G AL L + F S V W +I ++ + W +++ + L + +PDR +A+ +
Sbjct: 22 LAALALVVPARAQDGGVARVKEEPDYVKRLPFKPKLFEPVDAEDAEQHIKAAQEHGDAAPNYFQVGE-EMLMLPEVFSNLDDAAVKQDFPHEGNAAEEEASRSSRWWGRLYIDGWPQTVQYMRAHFGEPPPAGLRPMILADPPDACAAVLNNAEEIKKYDAIVVAKRGTCTFGTKGKNVLASGGAALVIVNNEPGNMHAPGPDAHDLKLSVSMVAEDEGNLLISSMEKGMALMAAMVPIHCAAQSETVQTMDLCRGSTEADRAIANSIIEGGWVKGLPGDAKHEYLQATFGTKIPTAKKYEIVHASPP-NACNEGSELLDNAEQVAGKAVVIERGGCQFLEKAMKAW----SSNASMVIIVNSETSINRYGCEPRWKGLKVDIPALMVTDKGGEAL-KLMKGKIVEFPASPKVRKDTWLKIDSYRDTTGWAKKKSEQKMQLKQLRTEHAEWPDRIAAINMGY 476
BLAST of mRNA_P-littoralis_Contig1.278.1 vs. uniprot
Match: A0A6H5KML8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KML8_9PHAE) HSP 1 Score: 183 bits (464), Expect = 1.310e-52 Identity = 94/124 (75.81%), Postives = 105/124 (84.68%), Query Frame = 3
Query: 24 MARFVVALVLLILGRHVGSSAQVRNDKGFELREPRKESITLN--QEERHKYIHDGKEYNRPPNLFDVGDGELKLLPEVLSGLSFETRDFKDDGTAAEQKELRDTRPWGRLHVDGWPAPIQYLRS 389
MAR V A LL+LG HV SSA+VR+ E+REP++E I N EERH+YIHDGKEYNRPPNLFDVG GELKLLPEVLS L+FETRDFKDDGTAAEQKELRD+RPWGRL++D WPAPIQYLRS
Sbjct: 1 MARMVGAAFLLLLG-HVASSARVRDV--VEIREPKQEKIVPNPEDEERHRYIHDGKEYNRPPNLFDVGGGELKLLPEVLSNLNFETRDFKDDGTAAEQKELRDSRPWGRLYIDDWPAPIQYLRS 121
BLAST of mRNA_P-littoralis_Contig1.278.1 vs. uniprot
Match: A0A7S3ZJ86_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZJ86_9STRA) HSP 1 Score: 190 bits (482), Expect = 2.140e-51 Identity = 147/406 (36.21%), Postives = 198/406 (48.77%), Query Frame = 3
Query: 198 PPNLFDVGDGELKLLPEVLSGLSFETRDFKDDGTAAEQKELRDTRPWGRLHVDGWPAPIQYLRSHFGGPAVEGMRPVVLADPLDACEPLRNVDSIVSAV------VIVTRGTCTYTTKARN-AQQAAANA----LLIVNNGQGLLHPPGPDGMDLDIFSAMIPQAEGTALIETVVKNDPVQGALVPMNCNKHGGIGDKNQQCLAAVKADRDLVDGLALGGFVHLPGGEKFEYLLAEFGVKVPSGGL---MLDGSPDPPGTACNPLTKEAADAAVGKAVLATRGECSFLEKAESMGAGGPSGRVGALIIANDDTS--LFHMGASPRWRGAKVSFPTVLVSDIAGHALANLPPESTIRFTPSQDVTMAAWDEIGHLKEVSAWPADTQKRQRMYETLVAGNTA--FPDR 1361
P N F V + E+KLLPEV+S L+FE RD G ++ELR WGRL+V+GWPA +QYLR HFG G P+V A+PLD C L + IV+ + V+ RGTCT+ TKA A+ NA LL+VNN G H PGPD ++ AM+ + EG AL+E + + + VP+NC + C A +D V + G V GE FEYLLAEFG P G+ ++D G C P TK+ A+ A+ G C FLEKA G + ++I+N D++ L G PRW V+ P LVS AG AL + T TPS AAW + A P + + + + L A +P+R
Sbjct: 39 PGNWFSVNN-EMKLLPEVMSKLTFEVRDHAAPGDLEAEEELRKNAHWGRLYVEGWPASMQYLRGHFGEHLPVGRLPLVAAEPLDLCSSLS--EDIVARINAKPHTVVAKRGTCTFGTKATYLAESVEDNASLATLLLVNNEPGNQHAPGPDAHEVQASVAMVAEWEGDALLEEMNASS-YEATFVPINCIESSETKQTQSLCEPAAASDATYVQEDRVDGGVLTVSGETFEYLLAEFGR--PFRGIERKVVDV-----GDGCLP-TKDDLTGAI--AIARRGGGCQFLEKAWRAQEAGAA----EVLISNRDSTDALVRAGCHPRWAARNVTVPVGLVSLAAGSALRSA---KTASVTPSHGGHGAAWAALEKYANGDAKPRSKKAQLKKIDALSAERHGADYPER 423
BLAST of mRNA_P-littoralis_Contig1.278.1 vs. uniprot
Match: A0A836C8Q4_9STRA (PA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8Q4_9STRA) HSP 1 Score: 162 bits (410), Expect = 1.660e-42 Identity = 96/263 (36.50%), Postives = 138/263 (52.47%), Query Frame = 3
Query: 132 ESITLNQEERHKYIHDGKEYNRPPNLFDVGDGELKLLPE--VLSGLSFETRDFKDDGTAAEQKELRDTRPWGRLHVDGWPAPIQYLRSHFGGPAVEGMRPVVLADPLDACEPLRNVDSIVSAVVIVTRGTCTYTTKARNAQQAAANALLIVNNGQGLLHPPGPDGMDLDIFSAMIPQAEGTALIETVVK-----NDPVQGALVPMNCNKHGGIGDKNQQCLAAVKADRDLVDGLALGGFVHLPGGE----KFEYLLAEFGVKV 887
ES QEE KY+ G+E +RPPNLFDV +G+ LPE V S ++F+ + F +G + +LR +RPWGR+++DGWP +QY+R FGG G +V A P DAC L N D + + A A L+IVNN +G LHPP PD +D+ +F AM+ + G +I+ + K N + L+P+NC+ G + C A A+R+++ LGG + L G E FEYL+ G V
Sbjct: 20 ESKPKPQEEGQKYLWMGEELDRPPNLFDV-NGQQLALPEGQVPSLINFDPQAFAKEGNDEAEVDLRASRPWGRVYIDGWPTHLQYMRGSFGGAPPAGPTELVAAQPEDACTQLANADDV-------------------KGKAAGAAGLIIVNNAEGNLHPPMPDAVDVQVFVAMVAKPAGNVVIKALQKRANEGNGGLMARLIPINCHDSGREIGAGEPCQATTMAEREVLTSRVLGGNLKLMGSEGNDSSFEYLVDAAGKAV 262
BLAST of mRNA_P-littoralis_Contig1.278.1 vs. uniprot
Match: A0A7S3YH33_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YH33_HETAK) HSP 1 Score: 127 bits (319), Expect = 7.230e-30 Identity = 80/218 (36.70%), Postives = 114/218 (52.29%), Query Frame = 3
Query: 204 NLFDVGDGELKLLPEVLSGLSFET-RDFKDDGTAAEQKELRDTRPWGRLHVDGWPAPIQYLRSHFGGPAVEGMRPVVLADPLDACEPLR----NVDSIVSAVVIVTRGTCTYTTKARNAQQAAANALLIVNNGQGLLHPPGPDGMDLDIFSAMIPQAEGTALIETVVKN-------DPVQGALVPMNCNKHGGIGDKNQQCLAAVKADRDLVDGLALG 821
NLF VG+ E+ LLPEV S L+F+ + F +QKE RD WGRL+++ WP+PIQY+++HFG PA EG VLA +CE + + + VI RG CT+ KAR A +A A L++VN GL H P PD D+ I +P+ EG L+ + + V+G VP+ C +C + AD+D + L +G
Sbjct: 53 NLFKVGE-EVLLLPEVESNLNFDQPKRFPSKKNIQKQKEARDGCFWGRLYIEHWPSPIQYMQAHFGLPAPEGDLKFVLAPDTHSCEEYQVGGGATEGELPVAVIALRGVCTFGNKARAAAKAGAALLVVVNTEAGLEHLPAPDAHDVAISVVSVPRDEGGVLLGHLDRALRPNTAPGSVRGRAVPIMCGARS-------ECRPPLVADQDYIRDLPIG 262
BLAST of mRNA_P-littoralis_Contig1.278.1 vs. uniprot
Match: A0A5D6Y1Z2_9STRA (PA domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y1Z2_9STRA) HSP 1 Score: 102 bits (254), Expect = 9.010e-20 Identity = 107/392 (27.30%), Postives = 170/392 (43.37%), Query Frame = 3
Query: 303 AEQKELRDTRP-WGRLHVDGWPAPIQYLRSHFGGPAV----EGMRPVVLADPLDACEPLRNVDSIV-SAVVIVTRGTCTYTTKARNAQQAAANALLIVNNGQGLLHPPGP-DGMDLDIFSAMIPQAEGTALIETVV-KNDPVQGALVPMNCNKHGGIGDKNQQCLAAVKADRD-LVDGLALGGFVH--LPGGEKFEYLLAEFGVKVPSGGLMLDGSPDPPGTACNP--LTKEAADAAVGKAVLATRGE-----CSFLE---KAESMGAGGPSGRVGALIIANDDTSLFHMGASPRWRGAKVSFPTVLVSDIAGHALANLPPEST----IRFTPSQDVTMAAWDEIGHLKEVSAWPADTQKRQRMYETLVAGNTAFPDRTSAVRAAFSAVSGG 1403
A EL P WGR+++ PIQY R FGG + E P D C L + + SAV++VTRG C++ KAR A+ A A AL++VN+ + + P D ++ I S M+ + G L TV+ + V G LVPM C++ + C ++R +V+ LA G V G E+L ++FG +P + + C +A GK L GE CS + +A+S GA A+++A D S + W G V+ + +V+ + L +S + F Q+ AW+ I L SAWP +++++ L+ + A+++ F AV+GG
Sbjct: 24 ASAPELDTAEPFWGRIYLRHGAVPIQYFRDSFGGAMLAREAEFRFPFDQVDNRSGCRALGSDEHFNGSAVLVVTRGECSFEQKARVAEAAGAGALVVVNDDESVTRPMAHIDDGEIQIPSVMVRRTAGELLRATVLGATERVFGRLVPMQCSR-----GPSSVCFPRTASERAYIVNALARSGVVMSTADGSVVGEFLASKFGGVMPQRAALPVSALLRAAAVCQSPGADADAMPRVDGKVALIAGGEGTPPGCSVADMVARAQSAGAL-------AVLVATDSVST-RPSVAEDWHGYNVTIFSGVVTAATMQRIVALQEQSPALGLVHFA-LQNAIADAWEAIRELARKSAWPVRVDRKEKLVRRLLGAFALSAGQKEALKSHFLAVAGG 401
BLAST of mRNA_P-littoralis_Contig1.278.1 vs. uniprot
Match: A0A5A8CFI4_CAFRO (PA domain-containing protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CFI4_CAFRO) HSP 1 Score: 68.6 bits (166), Expect = 1.500e-8 Identity = 42/117 (35.90%), Postives = 65/117 (55.56%), Query Frame = 3
Query: 375 QYLRSHFGGPAVEGMRPVVLADPLDACEPLRNVDSIV-SAVVIVTRGTCTYTTKARNAQQAAANALLIVNNGQGLLHPPGPDGMDLDIF--SAMIPQAEGTALIETVVKNDPVQGAL 716
++ + FGGP + G +VLADP+DAC PL + ++ A VI RGTC KAR AQ A AN L+++NN + D ++ ++F ++ +P + G + + V D V AL
Sbjct: 223 EFALADFGGPPIGGTMRLVLADPIDACSPLVDPHGMLRGAAVIARRGTCPMINKARAAQAAQANVLVLINNDE-------TDKLNAELFRLASELPGSAGASGSDLVDSTDEVAAAL 332
BLAST of mRNA_P-littoralis_Contig1.278.1 vs. uniprot
Match: A0A8A4TCU0_9BACT (M36 family metallopeptidase n=1 Tax=Sulfidibacter corallicola TaxID=2818388 RepID=A0A8A4TCU0_9BACT) HSP 1 Score: 66.6 bits (161), Expect = 7.300e-8 Identity = 35/88 (39.77%), Postives = 55/88 (62.50%), Query Frame = 3
Query: 447 DACEPLRNVDSIVSAVVIVTRGTCTYTTKARNAQQAAANALLIVNN-GQGLLHPPGPDGMDLDIFSAMIPQAEGTALIETVVKNDPVQ 707
DAC+ L N +I + ++ RG+C++ K RNAQ A A ++IVNN G GL++P G + D++I S + Q GT+L E ++ + VQ
Sbjct: 494 DACQALINGATITGNIALLDRGSCSFVDKVRNAQNAGAIGVIIVNNQGDGLVNPGGDNAEDINIPSLFVGQTFGTSLKEAILGGEDVQ 581 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1.278.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1.278.1 >prot_P-littoralis_Contig1.278.1 ID=prot_P-littoralis_Contig1.278.1|Name=mRNA_P-littoralis_Contig1.278.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=493bp MARFVVALVLLILGRHVGSSAQVRNDKGFELREPRKESITLNQEERHKYIback to top mRNA from alignment at P-littoralis_Contig1:1282557..1290519- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1.278.1 ID=mRNA_P-littoralis_Contig1.278.1|Name=mRNA_P-littoralis_Contig1.278.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=7963bp|location=Sequence derived from alignment at P-littoralis_Contig1:1282557..1290519- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1:1282557..1290519- >mRNA_P-littoralis_Contig1.278.1 ID=mRNA_P-littoralis_Contig1.278.1|Name=mRNA_P-littoralis_Contig1.278.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1479bp|location=Sequence derived from alignment at P-littoralis_Contig1:1282557..1290519- (Pylaiella littoralis U1_48)back to top |