prot_P-littoralis_Contig1.272.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1.272.1
Unique Nameprot_P-littoralis_Contig1.272.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length196
Homology
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BLAST of mRNA_P-littoralis_Contig1.272.1 vs. uniprot
Match: D7FT41_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT41_ECTSI)

HSP 1 Score: 135 bits (339), Expect = 3.970e-36
Identity = 65/99 (65.66%), Postives = 75/99 (75.76%), Query Frame = 0 
Query:   46 GIVDLHAEWPVVRKMGKVAATTLPLDGGAGTDGGAFGGDDAVPITYEAAIERFCEQSFLSSNQQRVCYSIAPFAAEVGKWLGLGVPPDRICRKLGKRNP 144
            G VDLH EWP+VR   K  + +   D G   D      D+A+ ITYEAAIER+CEQSFLS +QQRVCYSIAPFAAEVGKWLG+GV P+R+CRKLGKRNP
Sbjct:    6 GFVDLHTEWPLVRSTNKEVSRSS-RDRGDDDDATVRRQDEAMSITYEAAIERYCEQSFLSGSQQRVCYSIAPFAAEVGKWLGMGVSPERVCRKLGKRNP 103
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BLAST of mRNA_P-littoralis_Contig1.272.1 vs. uniprot
Match: A0A6U3WLY9_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6U3WLY9_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 2.030e-5
Identity = 24/70 (34.29%), Postives = 38/70 (54.29%), Query Frame = 0 
Query:   85 DAVPIT-------YEAAIERFCEQSFLSSNQQRVCYSIAPFAAEVGKWLGLGVPPDRICRKLGKRNPETC 147
            DA+P          EAA+   C +  LS+ ++++CY I P   +V     LG+P DR+C+++ K N E C
Sbjct:   40 DAIPKADQTNKPAIEAALGAQCAKDTLSARERKICYYIDPIKRDVAHPFSLGMPVDRLCKRINKSNSEIC 109
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1.272.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FT41_ECTSI3.970e-3665.66Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6U3WLY9_9STRA2.030e-534.29Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.225.10coord: 83..154
e-value: 5.8E-7
score: 32.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1contigP-littoralis_Contig1:1256898..1262577 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1.272.1mRNA_P-littoralis_Contig1.272.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1 1256571..1263096 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1.272.1 ID=prot_P-littoralis_Contig1.272.1|Name=mRNA_P-littoralis_Contig1.272.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=196bp
MVRYKGGRLVLAVLTVGMDCYARVGGTASTLAANGTCNVCRGVTQGIVDL
HAEWPVVRKMGKVAATTLPLDGGAGTDGGAFGGDDAVPITYEAAIERFCE
QSFLSSNQQRVCYSIAPFAAEVGKWLGLGVPPDRICRKLGKRNPETCFDA
REAERPSDATDPLLDWRSRPPSIPDGVHCSIEHRNSLSPRWVLLD*
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