prot_P-littoralis_Contig1.212.4 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1.212.4
Unique Nameprot_P-littoralis_Contig1.212.4
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length775
Homology
BLAST of mRNA_P-littoralis_Contig1.212.4 vs. uniprot
Match: A0A6H5KRS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRS6_9PHAE)

HSP 1 Score: 593 bits (1530), Expect = 4.850e-202
Identity = 377/689 (54.72%), Postives = 424/689 (61.54%), Query Frame = 0
Query:   96 PTRHLSSYNVPLSSFLDEASCAARRATLPLLVRKHRPAELRFKNMIRGGELSDALLSLEKNIDQVRKDLRVLHLGLATGGPRPYQDPRSHHWCMLRLRRLLGPAPTT----SGGTAQGEAEGAVETELAGLTKEILGAATAAAIMPHLIGRDGLEEEEEVVENGACAGGQAFRSRAAAVTQGRPTGGLKAYWPRLSELRLSCGILGGDLERLSGCFGSFPNLRVLDLRGHAFRPPTTNLSAFAEGLQVHTSSASPRNPAFRPGRLTTLSLTNFKVEGVAGVATLGKALSAERFPRLAALSIDSCRLADRQLCALAETLPGMSGTLKSLSLRSNYALSAEGVEALANALRTGSGSGSQPGCCRCCSAATLATESRFSPTPSSSYCGSVPGGIRSDAMAVASTTATMQKPA--PPVGDTAVAAESATALASAACFTKGGSARAPAASTSTTTAT-EYSLPERAPAWSVPSPSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDADADDCGDDVALTNRPRLMLESLDLSYSCWWSRPKRTARTGRERSA----GPFASLLNVLREGGACPYLRSLHLEGCYLGDTAVGRLVAALESESGSCRALRVLNVNGNLFGEVGVKLFADAFMRGKMPPHLHMVVFCSNAKPSYRKLHASMSLKDMNETIGLWAEHQEGVHACL 773
            PT+HLSS+N   SSFLDEASC  R  +LPLLVR+HRPAE+RFKNM+RGGE SDAL SLE NIDQVRK L VL  GL  GGPRPYQDPRSHHWCMLRLRRLLGP P      +GG ++ E EGAV+TELA LT E++G A AA ++P LI   GL  EEE    GA     A   R AA   G    GLKAYWP L EL LSCGI+ GDLE LS C GS P L VL L GH++R P T L AFA  L  H S+ASP  P  RP RL TLSL +F VEGV GVATLG+ LSAERFPRLA+LSIDSCRL D+QLCALA  LPGMS TLK+LS RSNYALS+ GV ALA ALR                A   AT+                GG        ++T AT  KP   P  G                C   G SA A A +T     T E  LPERAPAWSVPS S XXXXXXXX                                           + A      L +ESLDLSYSCWW+RP+R ARTG E SA    GPFA LL +L EG ACP LRSL LEGCYLGD +VG+LVAAL +ESGSCR LR LNVNGNLF ++GV LFADAF  GKMPP L M VFC NA+PSYR+L + M+ +DM ET+ LW+EHQ  +H  +
Sbjct:    3 PTQHLSSFNSSFSSFLDEASCITRHNSLPLLVREHRPAEIRFKNMVRGGEFSDALRSLELNIDQVRKSLCVLDFGLTAGGPRPYQDPRSHHWCMLRLRRLLGPGPLAEVGDAGGGSEDEEEGAVDTELAQLTVELMGPANAATLVPQLI--HGLTGEEE----GAGETPSAEEVRPAAAKLGAKVRGLKAYWPCLRELTLSCGIMRGDLEDLSACLGSLPALEVLVLAGHSYRAPQTTLVAFARAL--HESAASPAAP-IRPRRLRTLSLKHFTVEGVEGVATLGEVLSAERFPRLASLSIDSCRLGDKQLCALAAMLPGMSRTLKTLSFRSNYALSSVGVSALAEALR----------------APATATD----------------GG--------SATAATPTKPGFFPTTG----------------CLL-GRSASAGATTTGAGAPTAEKPLPERAPAWSVPSSSXXXXXXXXXTNCPRPTAAAA--------------------------------EAASAAPAHLTIESLDLSYSCWWNRPERAARTGSESSAKGGSGPFAGLLKILGEGVACPSLRSLRLEGCYLGDASVGQLVAALLNESGSCRKLRELNVNGNLFSKIGVGLFADAFFAGKMPPRLRMFVFCLNAEPSYRELRSDMAPEDMRETVELWSEHQNDLHLSI 593          
BLAST of mRNA_P-littoralis_Contig1.212.4 vs. uniprot
Match: D8LI43_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI43_ECTSI)

HSP 1 Score: 370 bits (949), Expect = 3.460e-119
Identity = 203/312 (65.06%), Postives = 228/312 (73.08%), Query Frame = 0
Query:    1 MRSLSPDVVEYVLQWLDLASHLRLREASLFDRDETPRRTRALAVRDCEQARRCQEKIFTPDTNTCLHSITLDIAAPNGSRSSHRGGSSNGNVMPPPTRHLSSYNVPLSSFLDEASCAARRATLPLLVRKHRPAELRFKNMIRGGELSDALLSLEKNIDQVRKDLRVLHLGLATGGPRPYQDPRSHHWCMLRLRRLLGPAPTTS----GGTAQGEAEGAVETELAGLTKEILGAATAAAIMPHLIGRDGLEEEEEVVENGACAGGQAFRSRAAAVTQGRPTGGLKAYWPRLSELRLSCGILGGDLERLSGCFG 308
            MRSLSP+VVE++LQWLDLASHLRLREAS FDRDETPRRT  LA R  EQARRCQ  IFTPD  T LHSITLD+ AP+   SS + G         PT+HLSS+N   SSFLDEASCA RR +LPLL+R+HRPAE+RFKNM+RG E S+AL SLE NIDQVR+ L VL  GL  GGPRPYQDPRSHHWCMLRLRRLLGPAP  +    GG ++ E EGAV TELA LT E++GAA AA ++PHLI   GL  EE+    GA     A   R AA T G   GGLKAYWP L EL LSCGI+ GDLE L+GC G
Sbjct:    1 MRSLSPNVVEHILQWLDLASHLRLREASTFDRDETPRRTTTLAARGSEQARRCQLVIFTPDKKTRLHSITLDVTAPSSGSSSSKCGME-------PTQHLSSFNSSFSSFLDEASCAKRRNSLPLLIREHRPAEIRFKNMVRGREFSEALRSLELNIDQVRESLCVLDFGLTAGGPRPYQDPRSHHWCMLRLRRLLGPAPLAAVGGAGGGSEDEGEGAVNTELAQLTVELIGAANAAMLVPHLI--HGLTGEEQ----GAGDTPSAEEFRPAAATLGAQVGGLKAYWPCLRELMLSCGIMRGDLEDLAGCLG 299          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1.212.4 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KRS6_9PHAE4.850e-20254.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LI43_ECTSI3.460e-11965.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00368LRR_RI_2coord: 413..441
e-value: 2.7
score: 14.1
coord: 353..381
e-value: 130.0
score: 2.3
coord: 696..723
e-value: 4.7
score: 12.4
coord: 664..691
e-value: 9.3
score: 10.3
coord: 310..339
e-value: 89.0
score: 3.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 533..610
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 567..586
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 76..99
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 552..566
NoneNo IPR availablePANTHERPTHR24113:SF10LEUCINE RICH REPEAT FAMILY PROTEINcoord: 355..440
NoneNo IPR availablePANTHERPTHR24113RAN GTPASE-ACTIVATING PROTEIN 1coord: 664..722
NoneNo IPR availablePANTHERPTHR24113:SF10LEUCINE RICH REPEAT FAMILY PROTEINcoord: 664..722
NoneNo IPR availablePANTHERPTHR24113RAN GTPASE-ACTIVATING PROTEIN 1coord: 355..440
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 284..724
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 274..447
e-value: 1.0E-17
score: 65.4
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 609..758
e-value: 2.4E-9
score: 38.2
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 415..436
e-value: 0.47
score: 10.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1contigP-littoralis_Contig1:1061105..1069339 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1.212.4mRNA_P-littoralis_Contig1.212.4Pylaiella littoralis U1_48mRNAP-littoralis_Contig1 1060930..1070392 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1.212.4 ID=prot_P-littoralis_Contig1.212.4|Name=mRNA_P-littoralis_Contig1.212.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=775bp
MRSLSPDVVEYVLQWLDLASHLRLREASLFDRDETPRRTRALAVRDCEQA
RRCQEKIFTPDTNTCLHSITLDIAAPNGSRSSHRGGSSNGNVMPPPTRHL
SSYNVPLSSFLDEASCAARRATLPLLVRKHRPAELRFKNMIRGGELSDAL
LSLEKNIDQVRKDLRVLHLGLATGGPRPYQDPRSHHWCMLRLRRLLGPAP
TTSGGTAQGEAEGAVETELAGLTKEILGAATAAAIMPHLIGRDGLEEEEE
VVENGACAGGQAFRSRAAAVTQGRPTGGLKAYWPRLSELRLSCGILGGDL
ERLSGCFGSFPNLRVLDLRGHAFRPPTTNLSAFAEGLQVHTSSASPRNPA
FRPGRLTTLSLTNFKVEGVAGVATLGKALSAERFPRLAALSIDSCRLADR
QLCALAETLPGMSGTLKSLSLRSNYALSAEGVEALANALRTGSGSGSQPG
CCRCCSAATLATESRFSPTPSSSYCGSVPGGIRSDAMAVASTTATMQKPA
PPVGDTAVAAESATALASAACFTKGGSARAPAASTSTTTATEYSLPERAP
AWSVPSPSPPSPPTTTTSRPASSHSSARSCQRRPTPASATPAAPAAPAAP
ADADADDCGDDVALTNRPRLMLESLDLSYSCWWSRPKRTARTGRERSAGP
FASLLNVLREGGACPYLRSLHLEGCYLGDTAVGRLVAALESESGSCRALR
VLNVNGNLFGEVGVKLFADAFMRGKMPPHLHMVVFCSNAKPSYRKLHASM
SLKDMNETIGLWAEHQEGVHACLP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt