mRNA_P-littoralis_Contig1052.10.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1052.10.1 vs. uniprot
Match: A0A6H5JXX9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXX9_9PHAE) HSP 1 Score: 172 bits (435), Expect = 3.310e-51 Identity = 77/143 (53.85%), Postives = 100/143 (69.93%), Query Frame = 1
Query: 145 ELPTPDADGYVGGNSQACHAQFIEFVEADSSSRDSESDLYRAFAFEIASQVGGRYCRHVEESPALEDMSLAKKKKAAANHPGLCGVHHAAVIAGVKTQDVVDKWGTTTANKYRNQACFDGAVALNARGAGVQLPRAQCFAEAC 573
++PTPD +GY GN+ ACH Q + + A++ + + S L RAFAFE+A++VG YC H + M+LA KKAAA HPGLCGVHHA +IA V+T+DV + G T ANK+RNQAC+DG +A+N RG GVQL RA CF AC
Sbjct: 2 DMPTPDVEGYKAGNTMACHGQRVSLIAANTPAEEGTSTLLRAFAFEVAAKVGAEYCHHDTAPEPMPSMALAAAKKAAAEHPGLCGVHHAHIIAAVRTEDVTSRSGFTAANKFRNQACYDGGMAMNTRGKGVQLKRADCFTHAC 144
BLAST of mRNA_P-littoralis_Contig1052.10.1 vs. uniprot
Match: A0A6H5KUP8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUP8_9PHAE) HSP 1 Score: 167 bits (424), Expect = 7.260e-50 Identity = 76/141 (53.90%), Postives = 101/141 (71.63%), Query Frame = 1
Query: 148 LPTPDADGYVGGNSQACHAQFIEFVEADSSSRDSESDLYRAFAFEIASQVGGRYCRHVEESPALEDMSLAKKKKAAANHPGLCGVHHAAVIAGVKTQDVVDKWGTTTANKYRNQACFDGAVALNARGAGVQLPRAQCFAEA 570
+PTPD +G GN+ ACH Q + + A++ + + S L RAFAFE+A++VG YC H + M+LA KKAAA HPGLCGV+HA +IA V+T+DV + G+T ANK+RNQAC+DGA+A+NARG GVQL RA+CF A
Sbjct: 1 MPTPDVEGCKAGNTMACHEQMVSLIAANTPAEEDTSTLVRAFAFEVAAKVGAEYCHHDTAPEPMPSMALAAAKKAAAEHPGLCGVYHAHIIAAVRTEDVTSRSGSTAANKFRNQACYDGAMAMNARGKGVQLKRAECFTHA 141
BLAST of mRNA_P-littoralis_Contig1052.10.1 vs. uniprot
Match: A0A6H5JH50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH50_9PHAE) HSP 1 Score: 162 bits (411), Expect = 7.920e-47 Identity = 75/110 (68.18%), Postives = 90/110 (81.82%), Query Frame = 1
Query: 244 DSESDLYRAFAFEIASQVGGRYCRHVEESPALEDMSLAKKKKAAANHPGLCGVHHAAVIAGVKTQDVVDKWGTTTANKYRNQACFDGAVALNARGAGVQLPRAQCFAEAC 573
+ +D+ RAFAFE+AS+VG RYC HV LEDMS AK+KKAAA+HPGLCGV+HA +IA V+TQDV +KW TT NKYRNQAC++GA A+NARGAGVQLPRA+CF AC
Sbjct: 104 EENTDVGRAFAFEVASKVGARYCSHVSAPEPLEDMSHAKRKKAAADHPGLCGVYHAHIIAAVRTQDVAEKWNQTTGNKYRNQACYNGAEAVNARGAGVQLPRAECFTRAC 213
BLAST of mRNA_P-littoralis_Contig1052.10.1 vs. uniprot
Match: A0A6H5K6B0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6B0_9PHAE) HSP 1 Score: 161 bits (408), Expect = 1.540e-46 Identity = 75/152 (49.34%), Postives = 102/152 (67.11%), Query Frame = 1
Query: 115 TNQYKLKQMAELPTPDADGYVGGNSQACHAQFIEFVEADSSSRDSESDLYRAFAFEIASQVGGRYCRHVEESPALEDMSLAKKKKAAANHPGLCGVHHAAVIAGVKTQDVVDKWGTTTANKYRNQACFDGAVALNARGAGVQLPRAQCFAEA 570
+ Q K +P P+ +G GN+ ACH Q + + A++ + + S L RAFAFE+A++VG YC H + M+LA KKAAA HPGLCGV+HA +IA V+T+DV + G+T ANK+RNQAC+DGA+A+NA G GVQL RA+CF A
Sbjct: 59 STQKPPKLWTYMPPPNVEGCKAGNTMACHEQMVSLIAANTPAEEDTSTLVRAFAFEVAAKVGAEYCHHDTAPEPMPSMALAAAKKAAAEHPGLCGVYHAHIIAAVRTEDVTSQSGSTAANKFRNQACYDGAMAMNAHGKGVQLKRAECFTHA 210
BLAST of mRNA_P-littoralis_Contig1052.10.1 vs. uniprot
Match: A0A6H5KH61_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH61_9PHAE) HSP 1 Score: 147 bits (370), Expect = 2.050e-41 Identity = 68/117 (58.12%), Postives = 88/117 (75.21%), Query Frame = 1
Query: 139 MAELPTPDADGYVGGNSQACHAQFIEFVEADSSSRDSESDLYRAFAFEIASQVGGRYCRHVEESPALEDMSLAKKKKAAANHPGLCGVHHAAVIAGVKTQDVVDKWGTTTANKYRNQ 489
M +LPTPD + YVGGN QAC+ Q ++ + A + ++ +D+ RAFAFE+ S+VG RYC H+ LEDMS AK+KKAAA+HPGLCGV+HA +IA V+TQDV +KW TT NKYRNQ
Sbjct: 1 MEDLPTPDIEAYVGGNQQACYVQLVDVLSALPAGEEN-TDVGRAFAFEVPSKVGARYCSHLSAPEPLEDMSHAKRKKAAADHPGLCGVYHAHIIAAVRTQDVAEKWNQTTGNKYRNQ 116
BLAST of mRNA_P-littoralis_Contig1052.10.1 vs. uniprot
Match: A0A6H5KQB2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB2_9PHAE) HSP 1 Score: 130 bits (327), Expect = 5.390e-35 Identity = 64/130 (49.23%), Postives = 82/130 (63.08%), Query Frame = 1
Query: 145 ELPTPDADGYVGGNSQACHAQFIEFVEADSSSRDSESDLYRAFAFEIASQVGGRYCRHVEESPALEDMSLAKKKKAAANHPGLCGVHHAAVIAGVKTQDVVDKWGTTTANKYRNQACFDGAVALNARGAG 534
ELP PD + Y GN++ S + ++L RAFAFEIA+ VGG YC H+ E + M+ + K AAA HPGLCGV+HA ++A VKTQDV + G+T NKYRNQAC DGA+ +NARG G
Sbjct: 2 ELPAPDVEAYKAGNTRPATIMVSLIANNPPSEDGTNNNLARAFAFEIAAAVGGEYCDHLTEPEPMPSMAPSAAKVAAAEHPGLCGVYHAHILAAVKTQDVQARSGSTAGNKYRNQACCDGAITMNARGRG 131
BLAST of mRNA_P-littoralis_Contig1052.10.1 vs. uniprot
Match: A0A6H5JAI4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAI4_9PHAE) HSP 1 Score: 109 bits (272), Expect = 1.400e-27 Identity = 50/78 (64.10%), Postives = 63/78 (80.77%), Query Frame = 1
Query: 337 LEDMSLAKKKKAAANHPGLCGVHHAAVIAGVKTQDVVDKWGTTTANKYRNQACFDGAVALNARGAGVQLPRAQCFAEA 570
+ M+LA KKAAA HPGLCGV+HA +IA V+T+DV + G+T ANK+RNQAC+DGA+A+NARG GVQL RA+CF A
Sbjct: 1 MPSMALAAAKKAAAEHPGLCGVYHAHIIAAVRTEDVTSRSGSTAANKFRNQACYDGAMAMNARGKGVQLKRAECFTHA 78
BLAST of mRNA_P-littoralis_Contig1052.10.1 vs. uniprot
Match: A0A6H5K6T9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6T9_9PHAE) HSP 1 Score: 103 bits (256), Expect = 2.850e-25 Identity = 48/79 (60.76%), Postives = 58/79 (73.42%), Query Frame = 1
Query: 337 LEDMSLAKKKKAAANHPGLCGVHHAAVIAGVKTQDVVDKWGTTTANKYRNQACFDGAVALNARGAGVQLPRAQCFAEAC 573
+ M A K AAA HPGLCGV+HA +IA VK QDV+ + G+T ANKYRNQAC+DG +A+NARG GVQL R +CF C
Sbjct: 1 MPSMKAAAAKVAAAEHPGLCGVYHAHIIAAVKIQDVLARSGSTAANKYRNQACYDGEMAMNARGQGVQLKREECFTHPC 79
BLAST of mRNA_P-littoralis_Contig1052.10.1 vs. uniprot
Match: A0A6H5KUN4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUN4_9PHAE) HSP 1 Score: 65.9 bits (159), Expect = 4.680e-11 Identity = 31/51 (60.78%), Postives = 39/51 (76.47%), Query Frame = 1
Query: 337 LEDMSLAKKKKAAANHPGLCGVHHAAVIAGVKTQDVVDKWGTTTANKYRNQ 489
+ M +A K AAA HPGLCGV+HA +IA VK+QDV+ + G+T ANKYRNQ
Sbjct: 1 MPSMKVAAAKVAAAEHPGLCGVYHAHIIAVVKSQDVLARSGSTAANKYRNQ 51 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1052.10.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1052.10.1 >prot_P-littoralis_Contig1052.10.1 ID=prot_P-littoralis_Contig1052.10.1|Name=mRNA_P-littoralis_Contig1052.10.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=193bp CSSATTICTSVLFLFSCGLVRRCCCCGLRPLSSPTLTQTNQYKLKQMAELback to top mRNA from alignment at P-littoralis_Contig1052:60650..61941+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1052.10.1 ID=mRNA_P-littoralis_Contig1052.10.1|Name=mRNA_P-littoralis_Contig1052.10.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1292bp|location=Sequence derived from alignment at P-littoralis_Contig1052:60650..61941+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1052:60650..61941+ >mRNA_P-littoralis_Contig1052.10.1 ID=mRNA_P-littoralis_Contig1052.10.1|Name=mRNA_P-littoralis_Contig1052.10.1|organism=Pylaiella littoralis U1_48|type=CDS|length=579bp|location=Sequence derived from alignment at P-littoralis_Contig1052:60650..61941+ (Pylaiella littoralis U1_48)back to top |