mRNA_P-littoralis_Contig1045.12.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1045.12.1
Unique NamemRNA_P-littoralis_Contig1045.12.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1045.12.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE)

HSP 1 Score: 695 bits (1793), Expect = 2.670e-251
Identity = 329/332 (99.10%), Postives = 330/332 (99.40%), Query Frame = 1
Query:    1 TCAWAQVPEDEDLKDPTSIAAKKFREDFRVPYPFFLRLVELVKKKDWFATAQRDAYGRRCHPVEHKVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVDWVGS 996
            TCAWAQV EDEDLKDPTSIAAKKFREDFRVPYPFFLRLVELVKKKDWFAT QRDAYGRRCHPVEHKVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDV+WVGS
Sbjct:   62 TCAWAQVLEDEDLKDPTSIAAKKFREDFRVPYPFFLRLVELVKKKDWFATTQRDAYGRRCHPVEHKVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGS 393          
BLAST of mRNA_P-littoralis_Contig1045.12.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE)

HSP 1 Score: 514 bits (1324), Expect = 6.380e-181
Identity = 243/331 (73.41%), Postives = 276/331 (83.38%), Query Frame = 1
Query:    4 CAWAQVPEDEDLKDPTSIAAKKFREDFRVPYPFFLRLVELVKKKDWFATAQRDAYGRRCHPVEHKVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVDWVGS 996
            CAWAQ+ ED+DL+D  SI++K+FR DFRVP  FFLRLV LVK KDWF T+  DA  R+ HPVEHKVLA LTILGRGN F SIY +SWMS  TVQ +FH+FC+HFA EMYDEHI+LPSE+NGELD VM QY++LGF GAMGS DVTHIGWS+CPYN  RSYTGKEG PTVGYQVTVNHAGR +AVTEGFT STNDKT +C D  V++IRTD QY EK F V+ +DGTT TLKGCYL+VDNGYHKW++L+EP+KYPLSE D+LFSKRLESVRKDVECFFGILK  FRI K+AM Y +QER+D VFFTCCILHNMLHT DGM  L E+  WV S
Sbjct:   34 CAWAQMLEDKDLEDSNSISSKQFRLDFRVPDSFFLRLVALVKSKDWFTTSGCDAARRQSHPVEHKVLAWLTILGRGNCFASIYQVSWMSAKTVQTMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWKILMEPTKYPLSENDILFSKRLESVRKDVECFFGILKGCFRIQKVAMAYHEQERIDNVFFTCCILHNMLHTFDGMDQLVENTLWVSS 364          
BLAST of mRNA_P-littoralis_Contig1045.12.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE)

HSP 1 Score: 486 bits (1251), Expect = 4.350e-169
Identity = 241/352 (68.47%), Postives = 269/352 (76.42%), Query Frame = 1
Query:   25 EDEDLKDPTSIAAKKFREDFRVPYPFFLRLVELVKKKDWFATAQRDAYGRRCHPVEHKVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYA----------------------------EKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVDWVGS 996
            ED+DL+D TSI AK+ R DFRVPY  FLRLV LVK K+WF+TA  DA G   HPVEHKVLA LTILGRGN F SIY +SWMS  TVQ +FH+FC HFA EMYDE I LP+EE+G+LD VM QY++LGF GA+GS DVTHI WSRCPYNQ RSYTGKEG PT+ YQVTV+HAGR +AVTEGFTGSTNDKTI+C D AV++I TDK Y                             EK F V+ +DGTT TLKGCYL+VDNGYHKW++LIEPSKYPLSE DLLFSKRLESVRKDVECFFGILK RFRILKLAM YQ QER+D VFFTC ILHNMLHT DGM  L E+ +WV S
Sbjct:   28 EDKDLEDSTSITAKQLRVDFRVPYTVFLRLVALVKSKNWFSTAVTDAVGWASHPVEHKVLAWLTILGRGNCFASIYQMSWMSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMEYQSQERIDNVFFTCYILHNMLHTFDGMDQLVENTNWVSS 379          
BLAST of mRNA_P-littoralis_Contig1045.12.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE)

HSP 1 Score: 427 bits (1099), Expect = 2.250e-145
Identity = 212/335 (63.28%), Postives = 255/335 (76.12%), Query Frame = 1
Query:   10 WA-QVPEDEDLK-----DPTSIAAKKFREDFRVPYPFFLRLVELVKKKDWFATAQRDAYGRRCHPVEHKVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVDWVGS 996
            WA Q+ E +DL+     DPTS  A++FRE FR+PYPFF+ LV LVK++DWF T ++DA GRR  PV+ KVLACL IL RGN F  IY++S++S  T    FH+F  +FA EMY EHIFLP+ +  +  +VM QY++LGF GA GSTDVTHI W  CPYNQ RSYTGKEG PTV YQVTV+H  RVLAVT GFTGSTNDK+II  D AV +IR D  Y+EK FTV++ DGT   LKGCYL+VDNGYHKW  LI PSKYP+ + DL FSKRLESVRKDVECFFGI+K RFRILKL++ Y KQE +D VFFTCCILHNMLH++D    +EE+ +W G+
Sbjct:   90 WAIQLQELKDLEVDGIVDPTSRPARRFRESFRLPYPFFVELVALVKQRDWFPTGKQDASGRRGIPVQLKVLACLQILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPTGDYQK--KVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGN 422          
BLAST of mRNA_P-littoralis_Contig1045.12.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE)

HSP 1 Score: 425 bits (1093), Expect = 2.980e-144
Identity = 200/318 (62.89%), Postives = 248/318 (77.99%), Query Frame = 1
Query:   43 DPTSIAAKKFREDFRVPYPFFLRLVELVKKKDWFATAQRDAYGRRCHPVEHKVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVDWVGS 996
            D T+  A++FR +FRVPYPFF+ LVELV+ +DWF T + D  GR+  PVE KVLACL IL RGNVF  IY++S++S  TV   FH+FC++FA E+YDE+++LP+ E+  L +VM QY+++GFPGA+GSTDVTHI W  CPYNQ R YTGKEGKPTV +QVTV+H+GRVLAVT GFTG+TNDKTII  D+AV RIRTD  Y E+ + ++ +DG     KGCYL+VDNGYHKWR LI PSK P+   DL+FSKRLES RKDVEC+FGILK RFRI KLA+ + KQE +D VFFTCCILHNMLH+ D  G + E+ +W GS
Sbjct:  123 DHTTREARRFRNNFRVPYPFFVHLVELVRDRDWFPTGESDVTGRQAVPVELKVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGED--LRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGS 438          
BLAST of mRNA_P-littoralis_Contig1045.12.1 vs. uniprot
Match: A0A6H5L0X4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0X4_9PHAE)

HSP 1 Score: 393 bits (1009), Expect = 4.550e-132
Identity = 204/333 (61.26%), Postives = 232/333 (69.67%), Query Frame = 1
Query:    1 TCAWAQVPEDEDLKDPTSIAAKKFREDFRVPYPFFLRLVELVKKKDWFATAQRDAYGRRCHPVEHKVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSR-CPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVDWVGS 996
            TCAWAQ+ ED+DL+D TSI AK+FR DFRVPY FFLRLV LVK K+WF  A  DA GR  HPVEHKVLA LTILGR N F SI+ +SWMS  TVQ +FH+FC HFA +MYDEHI L +EE+G+LD V+                    GW   CPYNQ RSYTGKEG PT+ YQV                      TI+C D AV++IRTDKQY EK F V+ +DGTT TLKG YL+VDNGYHKW++LIEPSKYPLSE DLLFSKRL+SVR+D     GILK RFRILKLAM YQ QER+D VFFTCCI+HNMLHT DGM  L E+   V S
Sbjct:  107 TCAWAQLLEDKDLEDSTSITAKQFRVDFRVPYTFFLRLVALVKSKNWFLAAATDAVGRASHPVEHKVLAWLTILGRNNCFASIFQVSWMSAKTVQGMFHKFCRHFARDMYDEHIHLLAEESGKLDHVV------------------RSGWVYGCPYNQARSYTGKEGFPTIAYQVV---------------------TIVCWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKGWYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLDSVRRDGSASDGILKGRFRILKLAMAYQSQERIDDVFFTCCIMHNMLHTFDGMDQLVENTIRVSS 400          
BLAST of mRNA_P-littoralis_Contig1045.12.1 vs. uniprot
Match: D7FPI7_ECTSI (Transposon protein, putative, Pong sub-class n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPI7_ECTSI)

HSP 1 Score: 387 bits (993), Expect = 2.110e-130
Identity = 181/254 (71.26%), Postives = 210/254 (82.68%), Query Frame = 1
Query:    4 CAWAQVPEDEDLKDPTSIAAKKFREDFRVPYPFFLRLVELVKKKDWFATAQRDAYGRRCHPVEHKVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYP 765
            CAWA++ ED+DL++  S  +K+FR DFRVP  FFLRLV LVK K+WFATA  DA GR+ HPVEHKVLA LTILGRGN F SIY +SWMS  TVQ +FH FC+HFA EMYDEHI+LPSE+NGELD VM QY++LGF GAMGS DVTHI W++CPYN  RSYTGKEG PT+GYQVTVNHAGR  AVTEGFTGSTNDKTI+C D AV++IRTDKQY EK F V+ +DGTT TLKGCYL+VDNGYHKW++L+   + P
Sbjct:   61 CAWARMLEDKDLEESNSRTSKQFRLDFRVPCAFFLRLVALVKSKNWFATAGCDAAGRQSHPVEHKVLAWLTILGRGNCFASIYQMSWMSAATVQAMFHMFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIVWNKCPYNLPRSYTGKEGVPTIGYQVTVNHAGRASAVTEGFTGSTNDKTIVCWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILMGAHQVP 314          
BLAST of mRNA_P-littoralis_Contig1045.12.1 vs. uniprot
Match: A0A6H5JUX7_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX7_9PHAE)

HSP 1 Score: 380 bits (976), Expect = 5.670e-129
Identity = 185/267 (69.29%), Postives = 210/267 (78.65%), Query Frame = 1
Query:  196 KVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVDWVGS 996
            +VLA LTILG+GN F SI+ +SWMS  TVQ VFH+FC  FA EMYDEHI LP+EE+G+L  VM QY++LG                 CPYNQ RSYTGK+  PT+ YQVTV+HA R +AVTEGFTGSTNDKTI+C D AVD+IRTDKQY EK F ++ +DGTT TLKGCY + DNGYHKW++LIEPSKYPLSE DLLFSKRLESVRKDVECFFGILK RFRILKLAM YQ QER+D VFFTCCILHNMLHT DGM  L E+ +WV S
Sbjct:   20 QVLAWLTILGKGNCFASIFQMSWMSAKTVQGVFHKFCRLFAREMYDEHIHLPAEESGKLHHVMKQYDRLG-----------------CPYNQARSYTGKDWFPTIAYQVTVDHASRAIAVTEGFTGSTNDKTIVCWDAAVDKIRTDKQYTEKTFDLYNEDGTTTTLKGCYFLDDNGYHKWQILIEPSKYPLSEDDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSS 269          
BLAST of mRNA_P-littoralis_Contig1045.12.1 vs. uniprot
Match: D7FSK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK2_ECTSI)

HSP 1 Score: 369 bits (947), Expect = 3.990e-125
Identity = 172/224 (76.79%), Postives = 194/224 (86.61%), Query Frame = 1
Query:  325 MYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVDWVGS 996
            MYDEHI LP+EE+G+LD V+ QY++LGF GAMGS DVTHI WSRCPYNQ RSYTGKEG PT+GYQVTV+HAGR +AVTEGFTGSTNDKT +C D AV++IRTDKQY EK F V+ +DGTT TLKGCY++VDNGYHKW++LIEPSKYPLSE DLLFSKRLESVRKDVECFFGILK R RIL LAM +Q QER+D VFFTCCILHNMLHT DGM  L E+ +WV S
Sbjct:    1 MYDEHIHLPTEESGKLDLVIEQYDRLGFTGAMGSMDVTHIAWSRCPYNQARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTTVCWDAAVEKIRTDKQYTEKTFDVYNQDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRLRILMLAMAFQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSS 224          
BLAST of mRNA_P-littoralis_Contig1045.12.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE)

HSP 1 Score: 370 bits (949), Expect = 9.790e-124
Identity = 176/280 (62.86%), Postives = 216/280 (77.14%), Query Frame = 1
Query:  160 DAYGRRCHPVEH-KVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVDWVGS 996
            D   R C P  H +VLACL IL RGNVF  IY++S++S  TV   FH+FC++FA E+YDE+++LP+ E+  L +VM QY+++GFPGA+GSTDVTHI W  CPYNQ R YTGKEGKPTV +QVTV+H+GRVLAVT GFTG+TNDKTII  D+AV RIRTD  Y E+ + ++ +DG     KGCYL+VDNGYHKWR LI PSK P+   DL+FSKRLES RKDVEC+FGILK RFRI KLA+ + KQE +D VFFTCCILHNMLH+ D  G + E+ +W GS
Sbjct:   70 DLSARCCFPPPHTQVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGED--LRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGS 347          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1045.12.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JBE2_9PHAE2.670e-25199.10Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHI0_9PHAE6.380e-18173.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNX4_9PHAE4.350e-16968.47DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JAU4_9PHAE2.250e-14563.28Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPH7_9PHAE2.980e-14462.89Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L0X4_9PHAE4.550e-13261.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FPI7_ECTSI2.110e-13071.26Transposon protein, putative, Pong sub-class n=1 T... [more]
A0A6H5JUX7_9PHAE5.670e-12969.29DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
D7FSK2_ECTSI3.990e-12576.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KY50_9PHAE9.790e-12462.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1045contigP-littoralis_Contig1045:49616..51530 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FSK2
PFAMsPlant_tran
Model size996
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons3
Evalue6.53e-126
EggNOG OGs2E2RF@1|root,2S9YA@2759|Eukaryota
DescriptionPlant transposon protein
Cds size996
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789381.1925216-CDS-P-littoralis_Contig1045:49615..498791680789381.1925216-CDS-P-littoralis_Contig1045:49615..49879Pylaiella littoralis U1_48CDSP-littoralis_Contig1045 49616..49879 -
1680789381.2039342-CDS-P-littoralis_Contig1045:50080..506141680789381.2039342-CDS-P-littoralis_Contig1045:50080..50614Pylaiella littoralis U1_48CDSP-littoralis_Contig1045 50081..50614 -
1680789381.2166488-CDS-P-littoralis_Contig1045:51332..515301680789381.2166488-CDS-P-littoralis_Contig1045:51332..51530Pylaiella littoralis U1_48CDSP-littoralis_Contig1045 51333..51530 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1045.12.1prot_P-littoralis_Contig1045.12.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1045 49616..51530 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1045.12.1

>prot_P-littoralis_Contig1045.12.1 ID=prot_P-littoralis_Contig1045.12.1|Name=mRNA_P-littoralis_Contig1045.12.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=332bp
TCAWAQVPEDEDLKDPTSIAAKKFREDFRVPYPFFLRLVELVKKKDWFAT
AQRDAYGRRCHPVEHKVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQ
FCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGW
SRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIIC
CDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIE
PSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERL
DYVFFTCCILHNMLHTHDGMGGLEEDVDWVGS
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mRNA from alignment at P-littoralis_Contig1045:49616..51530-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1045.12.1 ID=mRNA_P-littoralis_Contig1045.12.1|Name=mRNA_P-littoralis_Contig1045.12.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1915bp|location=Sequence derived from alignment at P-littoralis_Contig1045:49616..51530- (Pylaiella littoralis U1_48)
ACGTGTGCTTGGGCGCAGGTGCCGGAGGATGAAGACCTAAAGGATCCTAC AAGCATAGCGGCGAAGAAGTTTCGAGAGGACTTTCGCGTCCCCTACCCCT TTTTTCTGCGGCTTGTGGAGTTGGTGAAGAAGAAGGATTGGTTCGCCACC GCGCAGCGCGACGCGTATGGGCGGCGATGCCACCCAGTGGAGCACAAAGT GAGCTTGACGAGGTTGATCACTTGTGGGTTGTGGCTTGTGTATAGCAGTA GTTTTACTGCACTAGCAGACTCGGGGTGCGTTGAATTGAAGGAGGCGATA TTCCAAAATGGATGATACCAAAAAAGTAGCTGATCCTGCTGTAGAATGTT TGTGTGTGAGAGAGAGAGAGAGAGAGGGAGCTGCTCTCTCTCTTATACTG CTGTTGATGAACCCGCACCTGCTCTCTCTCTCTACTGCTGTTGATGAACC TGTGCGCAGTCGCCTTTGTCGGCTACGTCATACCTGGTACTCCGTACAGC AATACAGGGGACATACTCGTATTTTTGGATCCCTTTTTTGTTTGTATCAT ATGATATGATACAGCAGCCGCCTCTGTCGGCTATATCATACCTGGTACCT GGAACTCCGTGCAGCAGTACATCTACATCTGTCTGGATCGCATTCTAGTG CTGTACAGCAGTAGCTCTTTCAGCCGCAGAAATATAAGAAGTATATACCG CAACAGGACAGTGTCTGGATCACACTAATGGAATATTTGTATCACAGCGG TGGCCCTGTTGGTTGTGTCATGCAACAGCAGGTGTTCTGTCTGGAACGCC TACTCCTTTGCCTGTTTTGTGCTACGCACGCGCGCCAGGGTAACAACGTT GCTAATTCGTCTGCACCCTGCCCCCCCCCCCCCAATGAACACATGTTGCG AATGGTGCTGCCGTAGGTGCTGGCGTGTCTGACTATACTGGGCAGGGGGA ATGTATTCGGAAGCATCTACAACCTTTCGTGGATGAGCACCCCGACAGTG CAGAAGGTGTTCCACCAGTTCTGCGAGCACTTCGCAACCGAGATGTACGA CGAGCACATCTTCCTTCCCAGCGAGGAGAACGGCGAGCTGGATCGCGTCA TGGGACAGTACGAGAAGCTGGGGTTCCCGGGCGCAATGGGTTCAACGGAC GTCACCCATATCGGGTGGAGTAGGTGCCCGTACAACCAAGGACGTTCTTA CACCGGTAAGGAAGGCAAGCCTACGGTCGGATACCAGGTGACGGTCAACC ACGCTGGGCGTGTGCTGGCCGTGACAGAGGGGTTCACTGGGTCCACCAAC GACAAGACCATCATCTGCTGTGATGAAGCGGTAGACAGAATTCGGACCGA CAAGCAGTACGCCGAAAAACCATTCACAGTCCACAAAAAGGATGGTACCA CGGAAACCCTGAAGGGGTGCTACCTCATCGTCGACAATGGTTACCACAAG GTGAAAAAATGTAAAGTACCACACGAAATGTCGGGGGGGGTTTTCACGAG CACGCCTTGTTTGTCGGCCAACCTACACTATCATCCCGGTTGGTCGAGCT CCATGCCGTGGGTTTGACGTGCGACAATGAACGCGGTATGACACACAGAA GGTAAATATTTCCCCTTCTCTCCTTTGGTTTGTTTCGGTCCTTTCATGCA GTGGCGGATGCTCATTGAACCCTCGAAGTACCCGTTGAGCGAGGCTGACT TGCTGTTCTCGAAGAGGCTGGAGAGCGTGCGCAAGGATGTGGAGTGTTTT TTCGGCATCCTGAAGATGCGCTTCAGAATCCTGAAGCTCGCCATGACCTA CCAGAAGCAGGAGCGCCTCGACTACGTCTTCTTCACATGCTGTATCCTGC ACAACATGCTCCATACGCATGACGGCATGGGCGGCCTGGAGGAGGACGTG GACTGGGTCGGCAGT
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Coding sequence (CDS) from alignment at P-littoralis_Contig1045:49616..51530-

>mRNA_P-littoralis_Contig1045.12.1 ID=mRNA_P-littoralis_Contig1045.12.1|Name=mRNA_P-littoralis_Contig1045.12.1|organism=Pylaiella littoralis U1_48|type=CDS|length=996bp|location=Sequence derived from alignment at P-littoralis_Contig1045:49616..51530- (Pylaiella littoralis U1_48)
ACGTGTGCTTGGGCGCAGGTGCCGGAGGATGAAGACCTAAAGGATCCTAC
AAGCATAGCGGCGAAGAAGTTTCGAGAGGACTTTCGCGTCCCCTACCCCT
TTTTTCTGCGGCTTGTGGAGTTGGTGAAGAAGAAGGATTGGTTCGCCACC
GCGCAGCGCGACGCGTATGGGCGGCGATGCCACCCAGTGGAGCACAAAGT
GCTGGCGTGTCTGACTATACTGGGCAGGGGGAATGTATTCGGAAGCATCT
ACAACCTTTCGTGGATGAGCACCCCGACAGTGCAGAAGGTGTTCCACCAG
TTCTGCGAGCACTTCGCAACCGAGATGTACGACGAGCACATCTTCCTTCC
CAGCGAGGAGAACGGCGAGCTGGATCGCGTCATGGGACAGTACGAGAAGC
TGGGGTTCCCGGGCGCAATGGGTTCAACGGACGTCACCCATATCGGGTGG
AGTAGGTGCCCGTACAACCAAGGACGTTCTTACACCGGTAAGGAAGGCAA
GCCTACGGTCGGATACCAGGTGACGGTCAACCACGCTGGGCGTGTGCTGG
CCGTGACAGAGGGGTTCACTGGGTCCACCAACGACAAGACCATCATCTGC
TGTGATGAAGCGGTAGACAGAATTCGGACCGACAAGCAGTACGCCGAAAA
ACCATTCACAGTCCACAAAAAGGATGGTACCACGGAAACCCTGAAGGGGT
GCTACCTCATCGTCGACAATGGTTACCACAAGTGGCGGATGCTCATTGAA
CCCTCGAAGTACCCGTTGAGCGAGGCTGACTTGCTGTTCTCGAAGAGGCT
GGAGAGCGTGCGCAAGGATGTGGAGTGTTTTTTCGGCATCCTGAAGATGC
GCTTCAGAATCCTGAAGCTCGCCATGACCTACCAGAAGCAGGAGCGCCTC
GACTACGTCTTCTTCACATGCTGTATCCTGCACAACATGCTCCATACGCA
TGACGGCATGGGCGGCCTGGAGGAGGACGTGGACTGGGTCGGCAGT
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