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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 0 |
| Model size | 356 |
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Cds size | 354 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789380.583998-CDS-P-littoralis_Contig1045:66931..67063 | 1680789380.583998-CDS-P-littoralis_Contig1045:66931..67063 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1045 66932..67063 - |
| 1680789380.600435-CDS-P-littoralis_Contig1045:75747..75969 | 1680789380.600435-CDS-P-littoralis_Contig1045:75747..75969 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1045 75748..75969 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1045.16.1 >prot_P-littoralis_Contig1045.16.1 ID=prot_P-littoralis_Contig1045.16.1|Name=mRNA_P-littoralis_Contig1045.16.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=118bp
QVGYAALGRRQTSVHIPATAEAWSAKTPAVYAGSCASLNTACASVCVQIY
LRTTRYTEVPSSGELNGGYRQRTTAVKRDKHVAQGSTPVEQRRRPSETSS
RHPGFHLSFTVRSCPGFW back to topmRNA from alignment at P-littoralis_Contig1045:66932..75969- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig1045.16.1 ID=mRNA_P-littoralis_Contig1045.16.1|Name=mRNA_P-littoralis_Contig1045.16.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=9038bp|location=Sequence derived from alignment at P-littoralis_Contig1045:66932..75969- (Pylaiella littoralis U1_48)
CAGGTAGGGTACGCTGCCTTAGGTAGGCGGCAGACCTCAGTGCACATACC
TGCCACAGCAGAGGCTTGGTCTGCTAAAACTCCCGCCGTATACGCTGGGA
GCTGCGCTTCTCTCAACACAGCGTGTGCGTCTGTGTGTGTGCAGATATAT
CTCCGCACGACCCGTTACACTGAAGTCCCAAGCAGCGGTGAGCTTAACGG
CGGGTACCGTCAGCGAACAACGGTGAGCATTAGATTACCAGGACGCCGCG
TCGGGGTGTTGGCGTCAACGCAGGACGTGGGACCCCTCTTGCACGCGTAT
AATTTTGGGGAGCTGGAAATTCGGCGCATAATCCGCACAGCAGTACACAT
CCATCAAACCTTTGTTCGATACACACATAGCCTGTGTGCATTTCGAGCTG
AACCAAAATGTGGCGGAATTGCCTTCATGCCGTTGTTGTTTGGAGATGAT
GAGTATTCGTGAGAGAGGCAGAGATAGAGAAATGCAAGGCTGAGCCTGTA
GATTGCCACCGGCGCAGGACCCTGCGTGTGTTTGCCCGGCTTGCACCCGG
ACCAACCTACCTCTCTCTCTCATCTTATTTGCCGCAACGAACCCATACAT
ACCCTTCCTTCGATCATGCACGTTCCTGCGTTCCTGCGGTAGCTTCTTCG
GCGGAAGTTAGTTGCTGTGTGTGACTGCTGGGCCTGCGTTTTTTGTAAGA
TAATATCATACGTACAGGACCCGAGGAGGAGGGCCTTAGAGCCAGAGAGC
GTAACCCGGGGTTTATTGAAAGCGGAAGAGGAGAAAAGTGTGGCAGCCGT
TTGGTTGTTTTATGTGCACACCATGTACCATGGCGTGGCATCCGCCCGTA
CCTGTCTGTAGTCTAGACTGCTGCTGTTGTGTTGTTTGTACATTATGAAA
GTGCGGGTGTCGTTATCGGTGTTCTGGGCGATTTATTTGTGCTACGGAGC
TACGGAGTACTGCTGCTATCTTCATTTTGGCGCGTTGTCCATCTTGGACC
TCAAGACCGAGATTCTTAAATGGTGTGAATGCCCACGGAGTGGTTTCCTC
GTTCCCCTTTTGTATTTTATTGATCCATTTGTAATCAATGAGGGCAACAG
CCTGCGAGACCTCTCGAGAGACTGGTGTGCTTTGCACCGTACCTACCGTT
CTCGCTTGACTACATCTGCAGCTGCATCTATCATTGTACTTGTATTTCAT
ACACACCAAGTGCACTTGGAAGTATTGAAATGCGTACGATACATACATAC
ATACAGCAGTATGATATTCAGTACATCGAACGCACTTCTTCTGTGTTTTG
ACCGTCATTTAATGATGCAAGCTTTCTTTACTAGCAGTATTCTATCCCCC
CCATGTATGTTTTTCTTCTCTTTTTCGTATCCAGAGATCTACACTCGCAT
ATATAGGATCCTTGTGTGTCGAGAGGAAGATCACGAACGCACTGCACTGA
TGATGCCTGTACGAAAAAAAAGGAAACTATCGTATACTTCATACTTCGAA
GTACTTGGAAGTATATACTCCGTATATGAAATGTGGAAAGTATGGCATCA
AGAGCGTCCACCCACATATCATACTGGCACTGGTACCGCGGCATCACCTC
TCTCTGTCACAGCATGAGCACTTTTCTTTTACCCCTCAAAGGTATCAGCA
GTGTTCGGTGCAGGGTGAACCGACCGTAAAATGCCCTGGCTGGCCTGTTT
TCTGCTGGTACGAGTACGTAGTCCGGGTTGCATTCGTGAAGTTTTGAGGG
AAAACATGACATCCCATGGCCCGGTGCAGCAGTAATGGGAGGGGGATATT
TCGGAGTTCGAAGCATGCCCAAAAACGTTGTCCTTTTTTTCAGTTCAGCT
CCCTTCATCGTTTCGCACGTATGTTCACACATTCTACATGCGCGTAAACC
GCAATCGTCTCGATCATACGCTGCCCTCCTGACCCAGCCAACGCACACGG
CTGACACAGCAGAACAACAGCGCAGTCGCAAGCCCTTCAACCGTCACTGA
CACACAGACACCGTCACAAGCCCTTACCATTCTAGTATCCTCCACCAAAA
ACAAAATCCGCACACACAACAAATAGGAAATGCCGGCAGAGCCACCGTCG
ACGTTTTGTGTTTGGTCCCGTCCGTAAATTGTGGAAACGGGCGAAAATTT
CCAGGCCCCGCGGCTACAAAGTATAATACTCTGTGCGACTGGCGCCCCTA
CATCTGCCATCGGTGGCACGCGAAGATATATTAGTCGCTCCAGCAGATTG
TTTTGTTCTGATTGGAGGGAGATATTATGATACGTTCTACTTGTATGATA
CCAGTATGTGTCATACTTCGTACCGTACTTCGTATCATTGACGTGCGCGC
ATACTTCCACCCTCTCGTAGCTAGCTTCACCCCCCCAAAAGCACGGGTGC
CAGACCCTGAACGTTCAACACTCAGCCTGACGCTTCCCGAAGTATTGAAT
AGGTGGGGGCTTGGTTCCTGTGTGTGTGGGTGTACGTCGCTGTTGTTGCC
GTCTACCCGCGTTGGTGGCACGTACGTGTGTTTTTGCAAGCCACCAACGG
TCGATATAACCGAAATCGGCCACTTATATATACGATAATGTTTTGCCACT
CTTGAGGCGATATATGATGGGGGGGGGGGTACTGCAAGGAGGGCTGCGCA
AGAACATCTACGGTGGTTGTAGGGGAAATAAGGGATTTTTACTCGTCTCT
CTTTACTCGAGAAGAGAATGTTGAGGAGATTACCGACAAATAGAACAGTA
TTCCGCGCGATACACCTTCTTTTGTTTTTTCAACGTCAACTTATCACGTA
CCACCGTTGCAGCTCCCCCTGCGGCTATCAGCCTCAACAACACAAATTGC
AGAGGTAGTCCTGTCTGTGTGACACACGATACATCATGTATCATATCATA
TCATATGTGCTGAGTGTATTGCATGATACGGATCTTTATCTGTCAGCTTA
CATATTTTGCTACAGAGTATGATCTCGAAGTGTGTTGTCATCCCATGTTC
TCTGGCACACTAGTCTGCAAACTACAGGCTAGGCCCATCGACGGGGTCAC
ACAGGAGGAAGGTCAACACAGGAGGAGTTACCCCCACCTTCCTTCTGCGG
TACATGCGTGAGATTTTTTCTCGCGAGCAGGGGTCCGCGGTCCCTACCCT
CGTCGGCGAAGCCGAATCTGATTTTACTAACAGCATAGCCGCTTTCAAAG
TAGCAAAGGAACACATTCACCGGGAATCGAACCCCCGTTCCTCTGCATCT
AGTGGTTAACGAGGGACCACTAGTCCACCGGTCGATCGTACTCCGGAGTA
TATACTTCAACATTTTGAAAGTTTTTGGTTTAGGGGAGGACCCGAGGATA
CGTATGGTATAGAACAGTGTACAACAGCGCCCGAGGTCGGTTTATTTTGT
CGGTGATGGCGTCAACGTTTGTTTGTAGATGGTGGAGGGGGCTGCGAGGC
GTAAATGACCGCCTGGCACAATGAGACAAGGAAGTGTGATTTTCATGTCC
TTCGTTTACAAGTATAAGCAGAACACGAGATAGAGAATAATCCACCGCCG
ACCGAGGAGAGAAGAAAGGAGATAGATAAGGGGGGGGGGGGGTCATTGGG
AAGGAAGAAGAGCTGAAAGATTCATAATGATGTGACAGCCGCGGTAGAGG
AGAGCCAGGAGAAAGATACCGAACCAGGTGCACGGCATGCACCAGACTGA
CTTGACTGCTGTGATAGCTCTCACTCTCTTTTGGCTCTTCACCCCGCCGG
TCTCAATGCACCCCTCCTGGTGCCGTGTGATGCTATAGTCTACAGTAGCT
GCGGTTGTTTCCGTTTCGTACTTGGAAATATTACGTATGTTGTCTCATCT
TTCACTCCTCTGTTGCTTTGTCTTCACCGCCATGTTCGCTGGATCGATGG
GAGTTGCACCATGTCCATGCCTGATCTCGGCGCCTGGAACCTGACTTTGA
ATCTGATCTTGACTTTGATTTTGATACCATACGCGCTTCTTTGATCTTGC
AAAGACACCAACGTGTCCGCCTCTGTCTGGACGAGGGATCTAGAGTAGAC
AGTATTGCATTGTTGAAGCAAAGAACACGGAGAGGGATGCATGTACTTGT
GTTTCTACAACTCATCAGATGACATACCGTTCGTTGCAGCTCCCCTGAGG
GTACCAGGCTCAACAAAGTCATTCTAGGAGTCGTCTTGTGTGACACACGG
GGTACATCATGTGGTGAGTATGTACGATATTTTGTGTATTCCGTCAGTTC
GTCTGTGTTGCTGAACTGACCCTGAATTGATTGATTGCTTCCTCCCTTTA
TCATATTTTTAAAAGTCGCGTATTATTGAGGTGCATCTTATCCCGGGGTG
GGTCACAAGATTTTTACCAAGTACTTGTTCTTCGGCAAGAGGTTTGACTC
AAATAATTGTGTCTCGTGCATGTACGTGTCGTCACGATACAGCTGTTTAA
AATCCTGTCATGCCCAAATTTAGATGGGTTTTTGCGACTGCGTGGTCGTC
GTAGTAGTCCTCCTGCCGTGAAGACGCGTATACGCGTCTAAACAATTGAA
GCGTTGTGTAATCCTTTCGGGTCCGTTTCATTTCGTCGAATTTTCGGATT
TTCCTCAGTGTAGGTTTTTTTTTTAAATGTTCCCGTTTAGTACCATACCC
TTTGTTTGGGAAGGTAGAGCCTGTGACCACGGAAGGCGCCCGCGTTCGTA
CACATGGATCAGTTGTGCTGAGATTCGAAGGTTCCTGGTACTGAGCAGAG
ATAGGAATGGTTTTTAATGTGAAGTCAAAACCCACATCGTGCGTGGGCAT
GATGGTGGTGGTGCGCTCCCATGAGGTTCGCGTTGTTTTTTGCTTGGATC
AGAGGGAGAGAACATCGATCGAGTTCGTCGTGTCCATGCGCCATTGCTCC
GCGGGTCTCCTCCTTACATCATGTGTACAACTTAATGTGAAATTCGAAGT
TTTTTCAAGTCTGTCTTTCTGGATAGGCTTTTTCCGCGTGTATATACCGG
TCGCCCCGGTGGTTCAGTTGATTATCCTCGAAATCTTCCGACACTTACGC
TTGAGTTCGAATCCCGTTGCAGTAACACGATCTGGAATTCTTCCCATGTC
ATGCGTGAGGGTGGAAAACGATTAATTCGTGAGTAAACAAATTTCGAAGT
GTCGACGAGGAAAAGGGATGGCTGTACAAGTACCCTTTCTCGCGAGAAAA
AATGAAGGCAAGTACCGCAGTGGGAAGTGGAGAAATAAAAGAAAATAAAT
AAAAGAAAAAAGTCCTGTGTTGACTTCCTACTGCGTGACCCCGGTTGGAG
CGTCTACCCACCAGAAAGGGGTAGAGTGGCGTCCAATTAAAGGGATGACA
ACACACACAAACACACACAGAATGAAATTGGAAAAAGATGAAAAACGCCA
CACTACGAAAAATCGAAACAAAAAAATTAGCGCATCTCAATTTTGCCTCA
AGAGCGATACCACAAAGGGCACACAAATTTTCTAAAAACAAGACAAAAAA
AGTGCGTATGTTTTTATTTCCATGCAAAAGCACGAAGAGGATGCACAACA
AAAACACGAAGTACTGCATGTACAGGTGCTACTCATCAGCGCAAACCAGT
GTTACTGCAGCACCAACACACACACACACACACACGCCTTGCGTGCGCGC
ACACGACGATAGGTTTAGGCACAGAACGCATGACCTCGAATGACACGAAG
GTGACGAGGACAAGTTTAAGGTACAGAGCGCGGAAATCAAGTGGAGGGGG
GTGACGGGGCTTGAACGTCGACTTTCGAACTACTTTTTTTTTTTTACGAT
CGATTTGCTTGTTTGTGCGCAGGCAGAGATCGGACCAGAGAAGATAGGCC
GCGCCATGAGAGCGGTTCATCTTCATTTATTTTCATTCCTTCGGATAACG
GTAACCGTCCGAAGGTATCCTATCTTCAATGGCAGATCATGTGGTGCCCA
TATTATGCATCCTCTGCTGCTTTTCACCATACGAAAGTATGTGTAGGTAC
AAAAGGAATGGATTCAGCAGCGTGACTACCACGGTGCAACGACGAACGGC
AGACGGCTGCAAGTAACGAAATTAAACAGCAGTGCACTTGCTGTTTGTGA
TTCGTAGTCGAGGGTGCAGTTCAGTTTCGACTTAATCCTAGTACTGCTTC
AATGTCGGCTGGACTAAAAAAATAAACAGAGAGACACACACACATTCGTA
CGCCGGACCAGCTCAGCGCTTTCCAGGAACATGCAGCAGAAAGCCTTCGA
GGGGACGAAGGAAACAAAAACAAAGAACCTCCGTCGCTTAGGCTGGCGGA
ACGAACCGCTTGCGCGAAAAAATGTCCCTCGTACTTGGCAATTAATTATT
TCAAAAGGATACCTCTTCGACACATCAGCCTTGTCTTTTTTTGCATCAGC
CTTGTCTTTTTTTTTTTGTAACCAGCAGCAATTCGAGACGAGCATGATCC
ACTACTGGTAGCGCCGCGGTGACCGATTTTTTATCCAACGCACTTACCCG
TCCCGCGGGGTGGGTGAATATTCGTCTCTTTTGTGGCGTGTTTGTACAGC
AGCGCAACACCAGAAGCAGCAGCAGTGGCATCACCTGTGATACAAGACAG
GCACGACCCTGAACCACCAATTTTTTTTTTTTTCTCTTTTCACTGGACTA
CTCATTGCTGATGCCCCGTGTTTTGTATTGCAGCAGTATTCATGTGTGAG
CTTGCACGAAAAAGCTGTTCCGTTGTTGACAACAAAGCTGAACATCCAGT
CCGAGTTTTTTGTGACGCTCCCGCAGTCAGTGCTGTACAGATCTCATCAT
GGTCATGTCATGTGTTCCAAGTATCCACATACGCGGGGAACACGAACCGA
TTGTATCATACTTTCGTATACTCGAAGTACTGCGGTACTTTGTGCTTGGA
AGTAATATTTTTGTTTCAGAATGTACCTCCTTCAAGTACTTCGAAGTATC
AAATATCAAATATTAAAGGGACACTCGCCTGAAACGGGAGGGACTCCGTG
GGATGTGATGAGTTCTTCGCAGAAAGTTTTTTTTACACAGTATATGCTGG
TCGGAAACACACCTACAGCAGCAGCAGCGAGATCCACATCATTTTTCTAC
GAGAGGCAACGACTAAAAAATGCACAGGGATGTGTGTACAGCAGTAAGCA
CGTGTACCACAAAAAAGAAAGGAAAAGTGGTACCGGCTAATGCGCCAACA
TACAGTTCGAAACAGAAAGGCACAGACAGACTGACACCTAGATAAGACGG
GATGACACAGATCATGATGAACCTCGGAGGATATTATGTAGTACGTCGTG
CCTTGAAGGCTGCTCTTTATGTGCGAGTATCGGTGTTAAATTTTGCCACC
AAAAAAGGCAAATGAAATTACAACACTGTCTGTTGTACGTGTAATTGTAC
TGTACTTCGAATCATGTAGTAGGGTCCAGAGGGTTGTGCTACCCGCCGTG
TCTAGACCAGTTTCATCCGAACATGATGAGATCCACACCATCCACCGTAC
GCATACTTGTACCTGTTCTCCGCAGGACGCAGGTGAACGGATCTGAGCAA
AATGATGTACCTGGTAGCTTTAAGGAACCATTACGGTTTTTTGTCATGCA
CATCATTCGTTATTACACAAACTGAGCTCAGCGTGGCGGCATTGGCGAAT
CCCTGAGCTCTTGGCCGGCCCAGCTCGTATGTCATGCATATCATTCATCA
TGACACGCACGATGATTGTACACAGCAGTAGCAGTACCGCAGGTTACCGT
TCTGCACGTGTTTCAAGGTGTACGCGTTTGAGCCCGCCAGCGCCCAAAAG
GAACCTACGGCAAGGAGGGGGAAAGGAATGATTGGTTATCCGCCGCTATC
GGTTCGTAGATATCTATGATAGTGCAATGGAATGACCTCGTTTGAGGTTG
CTGGGCCGGTGAGCACGATCTCGCCAGTCCAGGAAGACCTGGGGCTTGAG
AGATTCGGGAGTCTCAAATTAATCGCCCCGCTCCGCCCAAGTCGATTGGT
CTGACTTTCGAGTCGATGGACTATCTCTCCGCGTGTATGCGGCATGCAGC
GTACTTCCGGTTATGTAGTTGTTGTGCCGTCTCTCATTGATGAATCTGAC
TTTCGATTCGATGCAGCGTAGCGTACTACCGGTAGTTGTTATGCCGGCGG
GCACGTGTGTGTAAGGGTACTTCCGTCAGTTCTTTTGTTTCGCAGTTGAC
TACCGTTAGCCACATGATGCACGTGTACACACAAGCACTTCATGATACGA
GGAATGAAGCATGTATTTCTTCTCACATCCCTAGCTAGGTCGGTTTCATT
CCAAGTTCGGAACCGTTGATGCATCCACAGCAAGATCGAGTGTCGGAGCC
GAAATTAGCGGCGGGATGTTGAGAAAAGCTATCGTCGAGAACGTTTAAAA
AAATGCGTCGTTTTGGCACCAGGGCTCTCTCGCTCTTCGTTGCGGGGAAA
TCGGGCTTTCCAATTGTCCCGCAACAATAAAATGACCCCGCGGAGACGCG
ATGTACACCCACGGCCGGATACGGTAGGCAAGACCCCACGTACAGTTGGT
CAATGTCACGTTGATGGGGAAGCCCGCGAAATCGCTCTCTTTCCCCCCTG
AGAGCCTTCTCAAACCCGATGTAGTTTTGAAATGTTTTTCGAGTGCTCAT
GATTCGACCATAATTCTACACATCACATGATACATGTGTGATTTCCAGGC
CACGCTATCATATTAAACTTCGTGCAGTAAGAACAATCGACGTGCCATAT
ACTCTGGTTTTCCAAGTTTTCTGAGTTCATCCTTCCGCTGTAGGATCAGT
GTTGATCGCTGCTGTAGTTTTGGCCCCCTACTTCTGAACCCGAGTTGTAC
GCGAAGGAGCCAACAGAAGCACCGCGAATCCCACCACGTCTGTACCCCTT
GCACAGGCGGTCAAAAGAGATAAGCACGTCGCCCAGGGCTCAACACCCGT
CGAGCAGCGACGACGGCCTTCGGAGACGAGTTCTCGTCATCCGGGTTTCC
ACCTCTCCTTCACCGTGCGTTCTTGCCCCGGGTTCTGG back to topCoding sequence (CDS) from alignment at P-littoralis_Contig1045:66932..75969- >mRNA_P-littoralis_Contig1045.16.1 ID=mRNA_P-littoralis_Contig1045.16.1|Name=mRNA_P-littoralis_Contig1045.16.1|organism=Pylaiella littoralis U1_48|type=CDS|length=354bp|location=Sequence derived from alignment at P-littoralis_Contig1045:66932..75969- (Pylaiella littoralis U1_48)
CAGGTAGGGTACGCTGCCTTAGGTAGGCGGCAGACCTCAGTGCACATACC
TGCCACAGCAGAGGCTTGGTCTGCTAAAACTCCCGCCGTATACGCTGGGA
GCTGCGCTTCTCTCAACACAGCGTGTGCGTCTGTGTGTGTGCAGATATAT
CTCCGCACGACCCGTTACACTGAAGTCCCAAGCAGCGGTGAGCTTAACGG
CGGGTACCGTCAGCGAACAACGGCGGTCAAAAGAGATAAGCACGTCGCCC
AGGGCTCAACACCCGTCGAGCAGCGACGACGGCCTTCGGAGACGAGTTCT
CGTCATCCGGGTTTCCACCTCTCCTTCACCGTGCGTTCTTGCCCCGGGTT
CTGG back to top
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