prot_P-littoralis_Contig21.214.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig21.214.1
Unique Nameprot_P-littoralis_Contig21.214.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length242
Homology
BLAST of mRNA_P-littoralis_Contig21.214.1 vs. uniprot
Match: A0A6H5LD10_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LD10_9PHAE)

HSP 1 Score: 91.7 bits (226), Expect = 1.710e-17
Identity = 39/51 (76.47%), Postives = 45/51 (88.24%), Query Frame = 0
Query:  141 TYHCQICLDDRPAGDGFVLSACGHTFCRTCLKAYITSKVHTSEVYPKCFHV 191
            TYHCQICLDDRPA  GFVLSACGH FCR CLKAY+TSK++ +EV+P CF+V
Sbjct:  140 TYHCQICLDDRPAEAGFVLSACGHLFCRECLKAYVTSKINDAEVHPACFNV 190          
BLAST of mRNA_P-littoralis_Contig21.214.1 vs. uniprot
Match: D7FNI4_ECTSI (Predicted E3 ubiquitin ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNI4_ECTSI)

HSP 1 Score: 70.5 bits (171), Expect = 2.740e-10
Identity = 30/43 (69.77%), Postives = 36/43 (83.72%), Query Frame = 0
Query:  145 QICLDDRPAGDGFVLSACGHTFCRTCLKAYITSKVHTSEVYPK 187
            +ICLDDRPA  GFVLSACGH FCR CLKAY+TSK++ +E  P+
Sbjct:    4 EICLDDRPAEAGFVLSACGHVFCRECLKAYVTSKINDAEFIPR 46          
BLAST of mRNA_P-littoralis_Contig21.214.1 vs. uniprot
Match: A0A662X4Q0_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X4Q0_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 1.420e-7
Identity = 27/58 (46.55%), Postives = 37/58 (63.79%), Query Frame = 0
Query:  141 TYHCQICLDDRPAGDGFVLSACGHTFCRTCLKAYITSKVHTSEVYPKCFHVMEECHTA 198
            T+ CQIC D  P      LSACGH+FC TCL+ Y+  K+  ++VYP+CF   +E  +A
Sbjct:  262 TFLCQICYDYVPVTTSVTLSACGHSFCETCLRNYLEFKIGEAQVYPRCFFERKEDRSA 319          
BLAST of mRNA_P-littoralis_Contig21.214.1 vs. uniprot
Match: A0A7S0H9B3_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0H9B3_9EUKA)

HSP 1 Score: 61.2 bits (147), Expect = 2.980e-7
Identity = 24/49 (48.98%), Postives = 33/49 (67.35%), Query Frame = 0
Query:  142 YHCQICLDDRPAGDGFVLSACGHTFCRTCLKAYITSKVHTSEVYPKCFH 190
            Y C IC ++    +GF+L  CGH FCR+C K YIT KV+  +V+P CF+
Sbjct:  107 YFCMICRNNNSVEEGFILEHCGHVFCRSCFKEYITLKVNDGKVHPCCFY 155          
BLAST of mRNA_P-littoralis_Contig21.214.1 vs. uniprot
Match: A0A7S3YF03_9EUKA (Hypothetical protein n=2 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YF03_9EUKA)

HSP 1 Score: 58.9 bits (141), Expect = 1.770e-6
Identity = 22/49 (44.90%), Postives = 33/49 (67.35%), Query Frame = 0
Query:  142 YHCQICLDDRPAGDGFVLSACGHTFCRTCLKAYITSKVHTSEVYPKCFH 190
            Y C IC ++    +GF L  CGH +CR+C K Y+T KV+  +V+P+CF+
Sbjct:   95 YFCLICQNNNSIDEGFALQNCGHMYCRSCFKEYLTLKVNDGKVHPRCFY 143          
BLAST of mRNA_P-littoralis_Contig21.214.1 vs. uniprot
Match: A0A7S2XFV0_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2XFV0_9EUKA)

HSP 1 Score: 56.2 bits (134), Expect = 1.420e-5
Identity = 21/48 (43.75%), Postives = 31/48 (64.58%), Query Frame = 0
Query:  142 YHCQICLDDRPAGDGFVLSACGHTFCRTCLKAYITSKVHTSEVYPKCF 189
            Y C IC ++    +GF L  CGH +CR+C K Y+T  V+  +V+P+CF
Sbjct:   98 YFCLICQNNNSVDEGFALQNCGHMYCRSCFKKYLTLMVNDGKVHPRCF 145          
BLAST of mRNA_P-littoralis_Contig21.214.1 vs. uniprot
Match: A0A067NRH7_PLEOS (Uncharacterized protein (Fragment) n=1 Tax=Pleurotus ostreatus PC15 TaxID=1137138 RepID=A0A067NRH7_PLEOS)

HSP 1 Score: 53.1 bits (126), Expect = 3.650e-5
Identity = 24/57 (42.11%), Postives = 37/57 (64.91%), Query Frame = 0
Query:  141 TYHCQICLDDRPAGDGFVLSACGHTFCRTCLKAYITSKV--HTSEVY-PKCFHVMEE 194
            ++ C ICLDD P  D  ++ +C H+FCR CL++YIT+KV  H   V+ P C  + ++
Sbjct:    1 SFSCSICLDDHPEDDVALIPSCEHSFCRDCLRSYITNKVSEHRYPVFCPVCITIADQ 57          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig21.214.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5LD10_9PHAE1.710e-1776.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FNI4_ECTSI2.740e-1069.77Predicted E3 ubiquitin ligase n=1 Tax=Ectocarpus s... [more]
A0A662X4Q0_9STRA1.420e-746.55Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A7S0H9B3_9EUKA2.980e-748.98Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
A0A7S3YF03_9EUKA1.770e-644.90Hypothetical protein n=2 Tax=Lotharella globosa Ta... [more]
A0A7S2XFV0_9EUKA1.420e-543.75Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
A0A067NRH7_PLEOS3.650e-542.11Uncharacterized protein (Fragment) n=1 Tax=Pleurot... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 144..198
e-value: 0.0036
score: 26.5
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 144..188
score: 9.966515
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 137..216
e-value: 2.8E-13
score: 51.6
IPR027370RING-type zinc-finger, LisH dimerisation motifPFAMPF13445zf-RING_UBOXcoord: 144..185
e-value: 2.0E-7
score: 30.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..36
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 140..188
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 162..171

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig21contigP-littoralis_Contig21:806724..808508 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig21.214.1mRNA_P-littoralis_Contig21.214.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig21 806724..814120 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig21.214.1 ID=prot_P-littoralis_Contig21.214.1|Name=mRNA_P-littoralis_Contig21.214.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=242bp
MRGDSFALEPAVKTPPARSRAGTTGQETVRGVYSGGGGGGGGDGGVVVFS
GISGISPTAAAAALSAPTTRLPPTAVDYVDLPPRSALPPSPFPVPPWYTT
PWRSRGRGISGGGGGGGGGEDSVAAKEERRVAGGAAAQASTYHCQICLDD
RPAGDGFVLSACGHTFCRTCLKAYITSKVHTSEVYPKCFHVMEECHTALE
ERRGAAGADAAAEAEATGRCRAERGGEVRLGRDGRGGGGAGA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR027370Znf-RING_LisH
IPR017907Znf_RING_CS