prot_P-littoralis_Contig208.9.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig208.9.1
Unique Nameprot_P-littoralis_Contig208.9.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length87
Homology
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BLAST of mRNA_P-littoralis_Contig208.9.1 vs. uniprot
Match: A0A6H5L594_9PHAE (Ribosomal_L23eN domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L594_9PHAE)

HSP 1 Score: 164 bits (415), Expect = 1.700e-50
Identity = 84/86 (97.67%), Postives = 86/86 (100.00%), Query Frame = 0 
Query:    1 MDKHRIIKFPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKDAVKALYDIESQNVNTLIRPDGKKKAYVRLTQDFDALEIANKIGII 86
            M+KHRIIKFPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKDAVKALYDIESQNVNTLIRPDGKKKAYVRLTQDFDALE+ANKIGII
Sbjct:   59 MNKHRIIKFPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKDAVKALYDIESQNVNTLIRPDGKKKAYVRLTQDFDALEVANKIGII 144
[Close]
BLAST of mRNA_P-littoralis_Contig208.9.1 vs. uniprot
Match: A0A835Z6Z2_9STRA (Ribosomal protein L23/L15e core domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6Z2_9STRA)

HSP 1 Score: 144 bits (364), Expect = 1.120e-42
Identity = 74/86 (86.05%), Postives = 80/86 (93.02%), Query Frame = 0 
Query:    1 MDKHRIIKFPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKDAVKALYDIESQNVNTLIRPDGKKKAYVRLTQDFDALEIANKIGII 86
            MDK RIIK+PLTTESAMKKIEDNNTLVFIVDVK+NKRQIK AV+ALY+I  Q VNTLIRPDG KKAYVRLTQD+DALE+ANKIGII
Sbjct:   63 MDKFRIIKYPLTTESAMKKIEDNNTLVFIVDVKANKRQIKAAVRALYEISCQKVNTLIRPDGLKKAYVRLTQDYDALEVANKIGII 148
[Close]
BLAST of mRNA_P-littoralis_Contig208.9.1 vs. uniprot
Match: A0A7S2STG4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STG4_9STRA)

HSP 1 Score: 144 bits (364), Expect = 1.420e-42
Identity = 71/86 (82.56%), Postives = 81/86 (94.19%), Query Frame = 0 
Query:    1 MDKHRIIKFPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKDAVKALYDIESQNVNTLIRPDGKKKAYVRLTQDFDALEIANKIGII 86
            MDKHRIIK+PLTTESAMKKIEDNNTLVFIVDV +NKRQIKDAV  ++DI+ Q VNTLIRPDG+KKAYVRLTQD+DAL++AN+IGII
Sbjct:   71 MDKHRIIKYPLTTESAMKKIEDNNTLVFIVDVTANKRQIKDAVSQMHDIQCQKVNTLIRPDGQKKAYVRLTQDYDALDVANRIGII 156
[Close]
BLAST of mRNA_P-littoralis_Contig208.9.1 vs. uniprot
Match: A0A6U1J6R7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6U1J6R7_9STRA)

HSP 1 Score: 143 bits (361), Expect = 2.500e-42
Identity = 70/86 (81.40%), Postives = 81/86 (94.19%), Query Frame = 0 
Query:    1 MDKHRIIKFPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKDAVKALYDIESQNVNTLIRPDGKKKAYVRLTQDFDALEIANKIGII 86
            MDK+R+IK+PLTTESAMKKIEDNNTLVFIVDV +NKRQIKDAVKA+Y+I    VNTLIRPDG+KKAYVRLTQD+DAL++AN+IGII
Sbjct:   55 MDKYRVIKYPLTTESAMKKIEDNNTLVFIVDVAANKRQIKDAVKAMYEISCSKVNTLIRPDGQKKAYVRLTQDYDALDVANRIGII 140
[Close]
BLAST of mRNA_P-littoralis_Contig208.9.1 vs. uniprot
Match: F0YN25_AURAN (60S ribosomal protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YN25_AURAN)

HSP 1 Score: 140 bits (353), Expect = 8.010e-42
Identity = 69/86 (80.23%), Postives = 80/86 (93.02%), Query Frame = 0 
Query:    1 MDKHRIIKFPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKDAVKALYDIESQNVNTLIRPDGKKKAYVRLTQDFDALEIANKIGII 86
            MDK+R+IK+PLTTESAMKKIEDNNTLVFIVDV +NKRQIKDAVK +Y+I    VNTLIRPDG+KKAYVRLTQD+DAL++AN+IGII
Sbjct:    1 MDKYRVIKYPLTTESAMKKIEDNNTLVFIVDVLANKRQIKDAVKQMYEIACAKVNTLIRPDGQKKAYVRLTQDYDALDVANRIGII 86
[Close]
BLAST of mRNA_P-littoralis_Contig208.9.1 vs. uniprot
Match: A0A2D4BQZ7_PYTIN (60S ribosomal protein L23a putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BQZ7_PYTIN)

HSP 1 Score: 138 bits (348), Expect = 3.030e-40
Identity = 67/86 (77.91%), Postives = 80/86 (93.02%), Query Frame = 0 
Query:    1 MDKHRIIKFPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKDAVKALYDIESQNVNTLIRPDGKKKAYVRLTQDFDALEIANKIGII 86
            MDK+RIIK PLTTESAMKKIEDNNTLVF+VD+ +NKRQIKDA+K LYDI++  VNTLIRPDG+KKAYVRLT D+DAL++AN+IG+I
Sbjct:   63 MDKYRIIKSPLTTESAMKKIEDNNTLVFLVDILANKRQIKDAIKQLYDIKAAKVNTLIRPDGQKKAYVRLTADYDALDVANRIGVI 148
[Close]
BLAST of mRNA_P-littoralis_Contig208.9.1 vs. uniprot
Match: A0A3F2RWD3_9STRA (Ribosomal_L23eN domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RWD3_9STRA)

HSP 1 Score: 138 bits (347), Expect = 4.300e-40
Identity = 69/86 (80.23%), Postives = 79/86 (91.86%), Query Frame = 0 
Query:    1 MDKHRIIKFPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKDAVKALYDIESQNVNTLIRPDGKKKAYVRLTQDFDALEIANKIGII 86
            MDK+RIIK PLTTESAMKKIEDNNTLVF+VD+ SNKRQIKDAVK LYDI+   VNTLIRPDG+KKAYVRLT D+DAL++AN+IG+I
Sbjct:   63 MDKYRIIKSPLTTESAMKKIEDNNTLVFLVDLLSNKRQIKDAVKQLYDIKVAKVNTLIRPDGQKKAYVRLTADYDALDVANRIGVI 148
[Close]
BLAST of mRNA_P-littoralis_Contig208.9.1 vs. uniprot
Match: A0A7S4QLV7_9DINO (Hypothetical protein n=3 Tax=Sar TaxID=2698737 RepID=A0A7S4QLV7_9DINO)

HSP 1 Score: 138 bits (347), Expect = 4.430e-40
Identity = 67/86 (77.91%), Postives = 79/86 (91.86%), Query Frame = 0 
Query:    1 MDKHRIIKFPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKDAVKALYDIESQNVNTLIRPDGKKKAYVRLTQDFDALEIANKIGII 86
            MDK+R IK+PLTTESAMKKIEDNNTLVFIVD+ +NKRQIK+AV+ LY+I+   VNTL+RPDG KKAYVRLTQDFDAL++AN+IGII
Sbjct:   64 MDKYRTIKYPLTTESAMKKIEDNNTLVFIVDISANKRQIKEAVRQLYEIQCAKVNTLVRPDGLKKAYVRLTQDFDALDVANRIGII 149
[Close]
BLAST of mRNA_P-littoralis_Contig208.9.1 vs. uniprot
Match: A0A1D2A5C7_AUXPR (Ribosomal_L23eN domain-containing protein n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D2A5C7_AUXPR)

HSP 1 Score: 137 bits (345), Expect = 7.450e-40
Identity = 66/86 (76.74%), Postives = 79/86 (91.86%), Query Frame = 0 
Query:    1 MDKHRIIKFPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKDAVKALYDIESQNVNTLIRPDGKKKAYVRLTQDFDALEIANKIGII 86
            +D   +IK+PLTTESAMKKIEDNNTLVFIVD++SNKRQI+DAV  LYDI+++ +NTLIRPDG+KKAYVRLT DFDAL++ANKIGII
Sbjct:   58 LDSFAVIKYPLTTESAMKKIEDNNTLVFIVDIRSNKRQIRDAVARLYDIQTRKINTLIRPDGEKKAYVRLTPDFDALDVANKIGII 143
[Close]
BLAST of mRNA_P-littoralis_Contig208.9.1 vs. uniprot
Match: A0A8K1FMI1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FMI1_PYTOL)

HSP 1 Score: 137 bits (344), Expect = 1.230e-39
Identity = 67/86 (77.91%), Postives = 80/86 (93.02%), Query Frame = 0 
Query:    1 MDKHRIIKFPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKDAVKALYDIESQNVNTLIRPDGKKKAYVRLTQDFDALEIANKIGII 86
            +DK+RIIK PLTTESAMKKIEDNNTLVF+VD+ +NKRQIKDAVK LYDI++  VNTLIRPDG+KKAYVRLT D+DAL++AN+IG+I
Sbjct:   63 LDKYRIIKAPLTTESAMKKIEDNNTLVFLVDLLANKRQIKDAVKQLYDIKAAKVNTLIRPDGQKKAYVRLTADYDALDVANRIGVI 148
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig208.9.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L594_9PHAE1.700e-5097.67Ribosomal_L23eN domain-containing protein n=2 Tax=... [more]
A0A835Z6Z2_9STRA1.120e-4286.05Ribosomal protein L23/L15e core domain-containing ... [more]
A0A7S2STG4_9STRA1.420e-4282.56Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6U1J6R7_9STRA2.500e-4281.40Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
F0YN25_AURAN8.010e-4280.2360S ribosomal protein n=1 Tax=Aureococcus anophage... [more]
A0A2D4BQZ7_PYTIN3.030e-4077.9160S ribosomal protein L23a putative n=1 Tax=Pythiu... [more]
A0A3F2RWD3_9STRA4.300e-4080.23Ribosomal_L23eN domain-containing protein n=2 Tax=... [more]
A0A7S4QLV7_9DINO4.430e-4077.91Hypothetical protein n=3 Tax=Sar TaxID=2698737 Rep... [more]
A0A1D2A5C7_AUXPR7.450e-4076.74Ribosomal_L23eN domain-containing protein n=1 Tax=... [more]
A0A8K1FMI1_PYTOL1.230e-3977.91Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019985Ribosomal protein L23TIGRFAMTIGR03636TIGR03636coord: 10..86
e-value: 1.1E-28
score: 97.4
IPR013025Ribosomal protein L25/L23PFAMPF00276Ribosomal_L23coord: 6..66
e-value: 8.2E-15
score: 54.9
IPR013025Ribosomal protein L25/L23PANTHERPTHR1162060S RIBOSOMAL PROTEIN L23Acoord: 1..86
IPR013025Ribosomal protein L25/L23HAMAPMF_01369_ARibosomal_L23_Acoord: 6..86
score: 21.815681
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 1..86
e-value: 1.7E-37
score: 130.2
IPR001014Ribosomal protein L23/L25, conserved sitePROSITEPS00050RIBOSOMAL_L23coord: 64..79
IPR012678Ribosomal protein L23/L15e core domain superfamilySUPERFAMILY54189Ribosomal proteins S24e, L23 and L15ecoord: 5..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig208contigP-littoralis_Contig208:52486..52987 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig208.9.1mRNA_P-littoralis_Contig208.9.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig208 49040..54232 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig208.9.1 ID=prot_P-littoralis_Contig208.9.1|Name=mRNA_P-littoralis_Contig208.9.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=87bp
MDKHRIIKFPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKDAVKALYDIE
SQNVNTLIRPDGKKKAYVRLTQDFDALEIANKIGII*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019985Ribosomal_L23
IPR013025Ribosomal_L25/23
IPR012677Nucleotide-bd_a/b_plait_sf
IPR001014Ribosomal_L23/L25_CS
IPR012678Ribosomal_L23/L15e_core_dom_sf