prot_P-littoralis_Contig207.58.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig207.58.1
Unique Nameprot_P-littoralis_Contig207.58.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length497
Homology
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BLAST of mRNA_P-littoralis_Contig207.58.1 vs. uniprot
Match: D8LFI8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFI8_ECTSI)

HSP 1 Score: 434 bits (1116), Expect = 9.830e-146
Identity = 245/461 (53.15%), Postives = 308/461 (66.81%), Query Frame = 0 
Query:   39 MTSRRVRSKTCHHPPSRRPGLRSSSSSRSRQVAPVNNNEEDMQPICGVELPHHIMLEVLSFLDTRAIVRGRRVSRAFRTDAPALIDMLDFKEGHEFPSATRMKVFSRVTEVRVDGDNSLVHAAAEGLRGCPSTLRRLTISREPSVAH-EAPLSEDATKDLCALPLRELETRRIALEFPSELRMPAWETLEKLVIRDATLDDVALVNLVASIPKGPLPMRHLDISRNPFGHEKAVQPLAAALWSFPYMEKLELTADRISSDGAKLVLRALLDGACPKIKSLDLSLNFLHDGVLEYLADGLGQAAHGLENLEKLGIGGRFSPDYGVTCFDAIARALAAGGLPKLNFLHLQGDVGPPQVGPLLRKFKLGACPNLAVVKVERSSRGYPAEDPESTEDAVSSMLELVTSSCAPLLREVHVLGMNLGEGLEWAEE--ERTAFYRARNESSFHRLALAGANRGVMIFV 496
            M +R +R+K   H  S R GLRSS    +R+     NN+      C  +LPHH++LE++SFLDTR+IV GR +SRAF +DAPAL+  LDF  G + PSA  +K+F  V +V +DG+  LVHA   GLRG  S+LR L +S   SV   E PLS+ AT DLCALPL EL+   + +EFP  L M AW TL++LVIRDA L D +L +L  SIP+G LP+RHLD+SRN FG    V P A AL SFP +E LEL+A RI       ++R LL+GACPK+++LDLSLNF  +G+L  L +GLG   HGL NL KLG G R + D  +TCF+ + +ALAAGGLPKL+FLHLQGDVGP QV P+L + + GACP LA+VK+ERS      ED    EDA  SM  LV S   P LREVH LGM L EG+E A E    +AFYRARN+S++H LA+ G  RGV +FV
Sbjct:    1 METRGMRAKEKQHNKSGRAGLRSSPRRCAREA---RNNKPGG---CDADLPHHVVLEIVSFLDTRSIVSGRCLSRAFSSDAPALVKTLDFHMGQQSPSAETIKLFPEVRQVNLDGNRDLVHAVVAGLRGWGSSLR-LDVSLHDSVPQKEEPLSKTATTDLCALPLTELDMMEVVIEFPPLLPMNAWRTLQRLVIRDAFLGDESLESLSKSIPEGALPLRHLDLSRNLFGGYDTVLPFADALRSFPDLEWLELSACRICRGSGDRIVRTLLEGACPKLRTLDLSLNFFTNGLLASLCEGLGAPGHGLLNLRKLGFGSRVTGDEMITCFEKVGKALAAGGLPKLDFLHLQGDVGPRQVSPVLSRLRGGACPMLAMVKLERSLHSTLGEDEFGAEDAAQSMFNLVISGHIPHLREVHALGMALNEGMEKANEAGRDSAFYRARNQSTWHHLAVEGKARGVQVFV 454
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig207.58.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LFI8_ECTSI9.830e-14653.15Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 141..419
e-value: 1.9E-17
score: 64.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..78
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 57..76
NoneNo IPR availablePANTHERPTHR24113:SF8LEUCINE RICH REPEAT FAMILY PROTEINcoord: 224..353
NoneNo IPR availablePANTHERPTHR24113:SF8LEUCINE RICH REPEAT FAMILY PROTEINcoord: 224..373
NoneNo IPR availablePANTHERPTHR24113RAN GTPASE-ACTIVATING PROTEIN 1coord: 224..373
NoneNo IPR availablePANTHERPTHR24113RAN GTPASE-ACTIVATING PROTEIN 1coord: 224..353
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 163..385
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 76..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig207contigP-littoralis_Contig207:288337..289827 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig207.58.1mRNA_P-littoralis_Contig207.58.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig207 288316..291213 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig207.58.1 ID=prot_P-littoralis_Contig207.58.1|Name=mRNA_P-littoralis_Contig207.58.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=497bp
MPNLLREIPQTPFVLRPPTQTPDSNTRDNTALLREEMAMTSRRVRSKTCH
HPPSRRPGLRSSSSSRSRQVAPVNNNEEDMQPICGVELPHHIMLEVLSFL
DTRAIVRGRRVSRAFRTDAPALIDMLDFKEGHEFPSATRMKVFSRVTEVR
VDGDNSLVHAAAEGLRGCPSTLRRLTISREPSVAHEAPLSEDATKDLCAL
PLRELETRRIALEFPSELRMPAWETLEKLVIRDATLDDVALVNLVASIPK
GPLPMRHLDISRNPFGHEKAVQPLAAALWSFPYMEKLELTADRISSDGAK
LVLRALLDGACPKIKSLDLSLNFLHDGVLEYLADGLGQAAHGLENLEKLG
IGGRFSPDYGVTCFDAIARALAAGGLPKLNFLHLQGDVGPPQVGPLLRKF
KLGACPNLAVVKVERSSRGYPAEDPESTEDAVSSMLELVTSSCAPLLREV
HVLGMNLGEGLEWAEEERTAFYRARNESSFHRLALAGANRGVMIFV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR036047F-box-like_dom_sf