mRNA_P-littoralis_Contig200.114.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig200.114.1
Unique NamemRNA_P-littoralis_Contig200.114.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig200.114.1 vs. uniprot
Match: D7FPE8_ECTSI (Intraflagellar transpot protein 74 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPE8_ECTSI)

HSP 1 Score: 659 bits (1700), Expect = 1.580e-232
Identity = 359/426 (84.27%), Postives = 387/426 (90.85%), Query Frame = 1 
Query:   91 MRPGSRGYVGGGLQPPGTGMRMATGQRGGRPMSGRMRTGQVTAGPSREAAYGVALSQEVKVTDRPVTQQGMSGMKTAGGGIGIG----RQVQDGSYFIGVLRSKMNDIHAEVGRLRVEIERHEKDVSQQGHLERTYETMLQEVKTLEGTLADYNLAIDKARTTADPGEVTKYLHDLEDQNRREAQGLDEIFLAKQQNEKEAQELEVEMEAVHGRMEEKINTLEPEKLHEYRVLLQRNNDLQSEVAARQANADRLSSQIGHLEARSAGDGGAALRGEYHVLEKSVGRLRRERENLQQDLEISNMNPKQARERLLSKVKADQERLKQLDARTVETTDIVDRMKQRLEDLESDLKADKRGDVSQNKVEVLQKRDKEMTEFIENFDQTKGGALADQQACRSTIVGLLEHISTGLESQHHVPDKDRVKEMK 1356
            MRPGSRGYVGGGLQPPGTGMRMATGQRGGRPMSGRMRTGQVTAGPSREAAYGVALSQEVKVTDRPVTQQGMSGMKTAG          RQVQDGS+FIGVLRSKMND+ AE+GRL+ EI+RHEK VSQQGHLERTY+TMLQ+VK LEGTLADYNLA+DKARTTADPGEVTKYLHDLED+NRREAQGLDEIFLAKQQ+E+E QELE EMEAVHGRMEEKINTLEPEKLHEYRVLLQRNN LQ+EVAA+QA ADRLS+ IG  E+RS G GGAALRGEY VLEKSVG LRRERENL QDLEISNMNPK AR+RLLSKVKADQERLKQLDAR  ETT+ V RMK+RLEDLESDLKAD++GDV+QNKVEVLQKRDKEMT+FIE FDQTK  AL DQ++ RSTIVGLLEHISTGLESQHH+PDK  +++ K
Sbjct:    1 MRPGSRGYVGGGLQPPGTGMRMATGQRGGRPMSGRMRTGQVTAGPSREAAYGVALSQEVKVTDRPVTQQGMSGMKTAGXXXXXXXXXXRQVQDGSFFIGVLRSKMNDVRAELGRLQAEIDRHEKSVSQQGHLERTYDTMLQDVKALEGTLADYNLAVDKARTTADPGEVTKYLHDLEDRNRREAQGLDEIFLAKQQHERETQELEAEMEAVHGRMEEKINTLEPEKLHEYRVLLQRNNHLQAEVAAKQAEADRLSAMIGQHESRSQGAGGAALRGEYQVLEKSVGALRRERENLSQDLEISNMNPKDARDRLLSKVKADQERLKQLDARAAETTEEVVRMKERLEDLESDLKADRKGDVAQNKVEVLQKRDKEMTDFIEKFDQTKQEALDDQRSARSTIVGLLEHISTGLESQHHIPDKGGMRDRK 426
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BLAST of mRNA_P-littoralis_Contig200.114.1 vs. uniprot
Match: A0A6H5JUN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUN2_9PHAE)

HSP 1 Score: 478 bits (1230), Expect = 2.270e-160
Identity = 285/426 (66.90%), Postives = 312/426 (73.24%), Query Frame = 1 
Query:  301 MSGMKTAGGGIGIG--RQVQDGSYFIGVLRSKMNDIHAEVGRLRVEIERHEKDVSQQGHLERTYETMLQE-----------------------------------VKTLEGTLADYNLAIDKARTTADPGEVTKYLHDLEDQNRREAQGLDEIFLAKQQNEKEAQELEVEMEAVHGRMEEKINTLEPEKLHEYRVLLQRNNDLQ------------------------SEVAARQANADRLSSQIGHLEARSAGDGGAALRGEYHVLEKSVGRLRRERENLQQDLEISNMNPK--------------------QARERLLSKVKADQERLKQLDARTVETTDIVDRMKQRLEDLESDLKADKRGDVSQNKVEVLQKRDKEMTEFIENFDQTKGGALADQQACRSTIVGLLEHISTGLESQHHVPDK 1335
            MSGMKTA         RQVQDGS+FIGVLRSKMND+ AE+GRL+ EI+RHEK VSQQGHLERTY+TMLQE                                   VK LEGTLADYNLA+DKARTTADP E+TKYLHDLED+NRREAQGLDEIFLAKQQ+E+E QELE EMEAVHGRMEEKINTLEPEKLHEYRVLLQRNN LQ                        +EVAA+QA ADRLS+ IG  E+RS G GGAALRGEY VLEKSVG LRRERENL QDLEISNMNPK                    +AR+RLLSKVKADQERLKQLDAR  ETT+ V RMK+RLEDLESDLKAD++GDV+QNKVEVLQKRDKEMT+FI+ FDQTK  AL DQ++ RSTIVGLLEHISTGLESQHH+PDK
Sbjct:    1 MSGMKTAAXXXXXXXXRQVQDGSFFIGVLRSKMNDVRAELGRLQAEIDRHEKSVSQQGHLERTYDTMLQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVKALEGTLADYNLAVDKARTTADPSEITKYLHDLEDRNRREAQGLDEIFLAKQQHERETQELEAEMEAVHGRMEEKINTLEPEKLHEYRVLLQRNNHLQVAYGTEFFGVKSALSSSSLGSLGTAEVAAKQAEADRLSAMIGQHESRSQGAGGAALRGEYQVLEKSVGALRRERENLSQDLEISNMNPKDVRATGDSLVAVSVKIFFFVKARDRLLSKVKADQERLKQLDARAAETTEEVVRMKERLEDLESDLKADRKGDVAQNKVEVLQKRDKEMTDFIDKFDQTKQEALDDQRSARSTIVGLLEHISTGLESQHHIPDK 426
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BLAST of mRNA_P-littoralis_Contig200.114.1 vs. uniprot
Match: A0A6V2XWW9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2XWW9_HETAK)

HSP 1 Score: 444 bits (1142), Expect = 1.670e-145
Identity = 273/608 (44.90%), Postives = 400/608 (65.79%), Query Frame = 1 
Query:   94 RPGSRG----YVGGGLQPPGTGMRMATGQRGGRPMSG--RMRTGQVTAGPSREAAYGVALSQEVKVTDRPVTQQGMSGMKTAGGGIGIGRQVQDGSYFIGVLRSKMNDIHAEVGRLRVEIERHEKDVSQQGHLERTYETMLQEVKTLEGTLADYNLAIDKARTTADPGEVTKYLHDLEDQNRREAQGLDEIFLAKQQNEKEAQELEVEMEAVHGRMEEKINTLEPEKLHEYRVLLQRNNDLQSEVAARQANADRLSSQIGHLEARSAGDGGAALRGEYHVLEKSVGRLRRERENLQQDLEISNMNPKQARERLLSKVKADQERLKQLDARTVETTDIVDRMKQRLEDLESDLKADKRGDVSQNKVEVLQKRDKEMTEFIENFDQTKGGALADQQACRSTIVGLLEHISTGLESQHHVPDKDRVKEMKEEKTFKDRQLKSSEATMRRLHQDKEKRLQEMEKVKTLDEKIPVELANLKEKMARMNGEMREFEDIDGLRDEAARTKEHLLGLRKQYRSRVEAMRGQVQQLAARHEACKKELAASETGKTLEALERKMRTYETNIFFLKEFVETKGREIDFQSLRGECMGMVKDLNEAIKRKGETEGFGVAY 1899
            RP SRG      G   + PGTGMR A GQRG   M G  R+RTG + AGP   AA GV +   V V+DRPVTQQGMSGMKTAG G   GRQVQD SY+IGVLR+K+ +I  E+ +L+ EI +H+ D +Q   LER YE +L+EV+ LEGTLADYNLA+DK R   DP EV  Y   L  +NRR+AQ +D++FL KQ  ++  +E E E+E +H   E+K+N LEP KL +Y+ LL R++ LQ+    +Q   D+   +    EA     G       Y  L++ + RLRR+R+ L ++ E++ M+P++A +++L++VK D  R  +LD +     + + R++++L DL +DL A +  D ++ K E L +RD+EMT+FI  FD+TK   +   Q  + TIVGLLEHIS GL ++ ++P  D++ EMK+E  FK++QL++S+ TM RL Q+KEKRLQEMEK+ TLD+KI  EL  L ++M  M  EM  FED+DGLR +A +TK++L  + ++Y++R + ++ QV QL+A++E  K +L+ ++T +TLEALE+K+     +IF L+E++ETKGRE DF+SL+ +C+ + + LN+   +  +    G  Y
Sbjct:    3 RPMSRGPGMMVPGTAQRVPGTGMRTAAGQRG---MLGTARLRTG-MAAGPGNVAAVGVGMQTAVNVSDRPVTQQGMSGMKTAGQG--PGRQVQDPSYYIGVLRAKLTEIATEISKLKREINQHQTDSAQYSGLERKYEELLKEVRNLEGTLADYNLAMDKVRMHTDPTEVEAYQKQLAAKNRRDAQEVDQVFLRKQGRDRATREAEEEVERIHRANEQKLNRLEPAKLSQYKALLDRSHQLQARAHEQQEALDQALGRAAEAEAELRERG---HNDRYKDLQRRLDRLRRDRQGLLEEQELAAMDPREANKKVLARVKEDNRRAAELDQKARALREEIGRLRRQLGDLSADLTAKEGADSAKTKYERLSQRDQEMTQFIAKFDETKAQIVGGIQNTQDTIVGLLEHISRGLGAESNMPSADKLDEMKDEARFKEKQLETSQMTMARLRQEKEKRLQEMEKINTLDDKIAEELRGLNDQMGSMRREMGAFEDLDGLRAQAEKTKKYLHEMMEKYQTRQDNVKQQVAQLSAQYEQVKNDLSNNKTHETLEALEKKIAAQANSIFSLQEYIETKGRETDFESLKDDCLRITESLNQITIKMEQNAESGAKY 601
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BLAST of mRNA_P-littoralis_Contig200.114.1 vs. uniprot
Match: A0A836CE00_9STRA (Intraflagellar transport protein 74 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE00_9STRA)

HSP 1 Score: 402 bits (1033), Expect = 3.760e-131
Identity = 239/465 (51.40%), Postives = 322/465 (69.25%), Query Frame = 1 
Query:  124 GLQPPGTGMRMATGQRGGRPMSGRMRTGQVTAGPSREAAYGVALSQEVKVTDRPVTQQGMSGMKTAGGGIGIGRQVQDGSYFIGVLRSKMNDIHAEVGRLRVEIERHEKDVSQQGHLERTYETMLQEVKTLEGTLADYNLAIDKARTTADPGEVTKYLHDLEDQNRREAQGLDEIFLAKQQNEKEAQELEVEMEAVHGRMEEKINTLEPEKLHEYRVLLQRNNDLQSEVAARQANADRLSSQIGHLEARSAGDGGAALRGEYHVLEKSVGRLRRERENLQQDLEISNMNPKQARERLLSKVKADQERLKQLDARTVETTDIVDRMKQRLEDLESDLKADKRG--DVSQNKVEVLQKRDKEMTEFIENFDQTKGGALADQQACRSTIVGLLEHISTGLESQHHVPDKDRVKEMKEEKTFKDRQLKSSEATMRRLHQDKEKRLQEMEKVKTLDEKIPVELANLKEKM 1512
            G  PPGTG+R  TG R        MRTG      SREAAYGVAL+ EV V +RPVTQQGMSGM+T+ G  G GR VQDGS+F+G LR K+ DI  E+ +L+ E E+H KD SQ G LERTYET+L EVK LEGTLAD+NLA+DKARTTADPGEV  YL +LED+NRR A+ LD +FL+KQ+ E+   ++E  +  VH  ME ++N ++P+KL EYR L+QR+  L++EVA+ QA  D ++++I   EAR  G  G + R EY  +E+ VGRLRR+R+ L  D+E+++M PK ARE+LL+KVKADQ+R K LD R+ +T   +++M+  + + E+D +A + G  ++  +KVEVLQ+RD EM+EFI+ FD T+ G L +Q   +  IV LL HIS+GLE+QH +P++ +V                   TMRRL  +KEKRL EM K+ TLDEKIPVEL +L++K+
Sbjct:   10 GQMPPGTGLRTGTGMR--------MRTGAAPPTASREAAYGVALTHEVNVDNRPVTQQGMSGMRTSQGA-GPGRLVQDGSFFLGQLRQKIMDIQRELAKLKAEGEQHTKDSSQYGGLERTYETLLAEVKNLEGTLADHNLAMDKARTTADPGEVVAYLSELEDRNRRNARELDNVFLSKQERERAVADVEQAIAQVHREMEGRVNAMDPQKLEEYRGLVQRSQQLEAEVASVQAETDAMTARIKEHEARM-GPKGGSYRQEYKDVEREVGRLRRQRDALAADIELASMEPKAAREKLLAKVKADQDRSKDLDRRSADTASEMEKMRAAVAEAEADARAGRSGAGEIDPSKVEVLQRRDAEMSEFIDRFDATRAGVLQEQSRAQEAIVALLAHISSGLEAQHTIPEQAQV-------------------TMRRLQGEKEKRLAEMAKIDTLDEKIPVELKSLRDKV 445
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BLAST of mRNA_P-littoralis_Contig200.114.1 vs. uniprot
Match: A0A662XXK3_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XXK3_9STRA)

HSP 1 Score: 391 bits (1004), Expect = 2.050e-124
Identity = 252/598 (42.14%), Postives = 371/598 (62.04%), Query Frame = 1 
Query:   97 PGSRGYVGGGLQPPGTGMRMATGQRG-------GRPMSGRMRTGQ-VTAGPSREAAYGVALSQEVKVTDRPVTQQGMSGMKTAGGGIGIGRQVQDGSYFIGVLRSKMNDIHAEVGRLRVEIERHEKDVSQQGHLERTYETMLQEVKTLEGTLADYNLAIDKARTTADPGEVTKYLHDLEDQNRREAQGLDEIFLAKQQNEKEAQELEVEMEAVHGRMEEKINTLEPEKLHEYRVLLQRNNDLQSEVAARQANADRLSSQIGHLEARSAGDGGAALRGEYHVLEKSVGRLRRERENLQQDLEISNMNPKQARERLLSKVKADQERLKQLDARTVETTDIVDRMKQRLEDLESDLKADKR---GDVSQNKVEVLQKRDKEMTEFIENFDQTKGGALADQQACRSTIVGLLEHISTGLESQHHVPDKD--RVKEMKEEKTFKDRQLKSSEATMRRLHQDKEKRLQEMEKVKTLDEKIPVELANLKEKMARMNGEMREFEDIDGLRDEAARTKEHLLGLRKQYRSRVEAMRGQVQQLAARHEACKKELAASETGKTLEALERKMRTYETNIFFLKEFVETKGREIDFQSLRGECMGMVKDLN 1851
            P  R   G  L P  TG+R  TGQRG       GRP++GR+ TGQ   A P + A YG++L+ EV V+DRPVTQQGM GM+   G  G GRQVQD S+F G L SK  +I +E+ +L+ EIE+  KD +Q   LER YET+  EV+ LEG LADYNLA+DK R+  DP E+ +    L  +N +EA+  D +F+ +Q+ EK  + +E EM  +HG+ +EKIN L P+KL  Y+ LL+ ++  + E+ AR    + +   I   EA  + D     R EY  LE+   RL++ER+ + +D + + M+P +AR  LL+KVK D+ +L  L+      T     + + + DL+S+L  D+R   G   + + E L  +DKEMT F+E F   K   L  Q+  ++ IV LLEHIS G+  +  +P  +   ++E++ + +FK+RQL+SS  T +RL  + +KR  E+EKV TLD KI VEL +L +KM  M  +M EF  +D L++  A+TK+HLL L+KQY  R +AMR QV  L+ + E   +E+AAS+T K L+ALE+K+R +E NIF LKE++++K RE+D+  L+ +C   +++LN
Sbjct:   28 PSGRPGTGQSLNPI-TGVRPGTGQRGMLGSSAGGRPLTGRLGTGQQAPATPGQTAGYGISLNTEVNVSDRPVTQQGMMGMRVGTGSAGPGRQVQDASFFKGKLHSKTAEITSEIDKLQREIEQDAKDKAQCAQLERKYETLALEVRDLEGQLADYNLAMDKLRSATDPAEIRQVQEQLHQRNAKEAEEADRVFIMRQEQEKSVRRMEDEMAEIHGKHQEKINQLAPQKLQRYKELLEEHHQSEVEIEARSNELELVLHAIHQKEAELSAD---RYRDEYEALERQARRLQKERDAVAEDAKTAQMDPSEARAVLLAKVKDDKSKLDALEGALQVATTEKQELSKAVADLQSEL--DERASGGSKQEQRFEELFAKDKEMTVFLEQFPAKKEAELLSQRETQAVIVQLLEHISAGMAKEDKLPGANAANLEEIRRDLSFKERQLESSVTTKQRLTMELQKRQAELEKVNTLDTKIAVELTSLLQKMETMTTDMTEFGKLDALQEVHAQTKQHLLRLKKQYIGRRDAMRQQVTALSGQLETLAQEIAASDTAKNLDALEQKLRHHEQNIFHLKEYIDSKSREVDYDHLKQDCFRTLQELN 619
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BLAST of mRNA_P-littoralis_Contig200.114.1 vs. uniprot
Match: D0NIV2_PHYIT (Intraflagellar Transport Protein 72/74 n=9 Tax=Phytophthora TaxID=4783 RepID=D0NIV2_PHYIT)

HSP 1 Score: 384 bits (986), Expect = 1.650e-121
Identity = 258/646 (39.94%), Postives = 384/646 (59.44%), Query Frame = 1 
Query:   58 RYKRNTYSSYSMRPGS----RGYVGGGLQPPG----------------TGMRMATGQRG-------GRPMSGRMRTGQ-VTAGPSREAAYGVALSQEVKVTDRPVTQQGMSGMKTAGGGIGIGRQVQDGSYFIGVLRSKMNDIHAEVGRLRVEIERHEKDVSQQGHLERTYETMLQEVKTLEGTLADYNLAIDKARTTADPGEVTKYLHDLEDQNRREAQGLDEIFLAKQQNEKEAQELEVEMEAVHGRMEEKINTLEPEKLHEYRVLLQRNNDLQSEVAARQANADRLSSQIGHLEARSAGDGGAALRGEYHVLEKSVGRLRRERENLQQDLEISNMNPKQARERLLSKVKADQERLKQLDARTVETTDIVDRMKQRLEDLESDLKADKRGDVSQNKVEVLQKRDKEMTEFIENFDQTKGGALADQQACRSTIVGLLEHISTGLESQHHVPDKD--RVKEMKEEKTFKDRQLKSSEATMRRLHQDKEKRLQEMEKVKTLDEKIPVELANLKEKMARMNGEMREFEDIDGLRDEAARTKEHLLGLRKQYRSRVEAMRGQVQQLAARHEACKKELAASETGKTLEALERKMRTYETNIFFLKEFVETKGREIDFQSLRGECMGMVKDLNE---AIKRKGETEGFGVA 1896
            R K +TY  +  RPG+    R   GGGL P G                TG R  TGQRG       GRP++GR+ TGQ V A P + A YG++L+ EV V+DRPVTQQGM GM+   G  G GRQVQD S+F G L SK  +I +E+ +L+ E+E+  KD +Q   LER YE M  EV+ LEG LADYNLA+DK R+  DP E+ +    L  +N +EA+ +D +FL  ++ EK  + +E EM  +HG+ ++KIN L P+KL  Y+ LL+ ++  + E+ AR    + +   I   EA  + D     R EY  LE+   RL++ER+   +D + + M+P +AR  LL+KVK D+ +++ L+            + + + D++S+L     G    +K E L  +DKEM+ F+E F   K   +  Q+A +  IV LLEHIS G+  +  +P  +   ++EM+ + TFK+RQL+SS  T +RL  + +KR  E++KV TLD KI +EL++L +KM  M  +M EF  ID L++  A+TK+HLL L+KQY  R +AMR QV  L+ + E    E A  ET K L+ALE+K+R +E NIF LKE++++K RE+D++ L+ +C   +++LN    A +++ +    G+A
Sbjct:   15 RTKHSTYFFFMSRPGTSSGQRPGTGGGLAPVGGLPSGXXXXXXXXXXXTGARPGTGQRGMLTSASGGRPLTGRLGTGQQVPATPGQTAGYGISLNTEVNVSDRPVTQQGMMGMRV--GSAGPGRQVQDASFFKGKLHSKTAEITSEIEKLQREVEQDAKDKAQCAQLERKYEKMALEVRDLEGQLADYNLAMDKMRSATDPAEIRQVQEQLHQRNAKEAEDVDRVFLMHKEQEKSVRNMETEMTEIHGKHQDKINQLAPQKLQRYKELLEEHHQSEVEIEARSQELELVMHAIHQKEAELSSD---RYRDEYEALERQARRLQKERDAAAEDAKTAQMDPNEARAVLLAKVKDDKAKMEALEGVLQSAGAEKQELVKVVADVQSELDERASGSDPAHKYEALFAKDKEMSTFLEQFPAKKEAEMQAQRATQGVIVQLLEHISAGMAKEDKLPGTNAANLEEMRGDLTFKERQLESSVTTKQRLTMELQKRQAELDKVNTLDAKIALELSSLLQKMDTMTTDMTEFGKIDALQEVHAQTKQHLLRLKKQYIGRRDAMRQQVTSLSTQLENLVHETAQQETAKNLDALEQKLRHHEQNIFHLKEYIDSKSREVDYEHLKQDCFRTLQELNTLHVAQQQRQQQLHLGIA 655
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BLAST of mRNA_P-littoralis_Contig200.114.1 vs. uniprot
Match: H3HB40_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HB40_PHYRM)

HSP 1 Score: 395 bits (1016), Expect = 1.980e-120
Identity = 257/613 (41.92%), Postives = 375/613 (61.17%), Query Frame = 1 
Query:   97 PGSRGYVGGGLQPPGTGMRMATGQRG-------GRPMSGRMRTGQ-VTAGPSREAAYGVALSQEVKVTDRPVTQQGMSGMKTAGGGIGIGRQVQDGSYFIGVLRSKMNDIHAEVGRLRVEIERHEKDVSQQGHLERTYETMLQEVKTLEGTLADYNLAIDKARTTADPGEVTKYLHDLEDQNRREAQGLDEIFLAKQQNEKEAQELEVEMEAVHGRMEEKINTLEPEKLHEYRVLLQRNNDLQSEVAARQANADRLSSQIGHLEARSAGDGGAALRGEYHVLEKSVGRLRRERENLQQDLEISNMNPKQARERLLSKVKADQERLKQLDARTVETTDIVDRMKQRLEDLESDLKADKRGDVSQNKVEVLQKRDKEMTEFIENFDQTKGGALADQQACRSTIVGLLEHISTGLESQHHVPDKD--RVKEMKEEKTFKDRQLKSSEATMRRLHQDKEKRLQEMEKVKTLDEKIPVELANLKEKMARMNGEMREFEDIDGLRDEAARTKEHLLGLRKQYRSRVEAMRGQVQQLAARHEACKKELAASETGKTLEALERKMRTYETNIFFLKEFVETKGREIDFQSLRGECMGMVKDLNE---AIKRKGETEGFGVA 1896
            P  R   G  L P  TG R  TGQRG       GRP++GR+ TGQ   A P + A +GV+L+ EV V+DRPVTQQGM GM+T  G  G GRQVQD S+F G L SK  +I AEV +L+ EIE+  KD +Q   LER YETM  EV+ LEG LADYNLA+DK R+  DP E+ +    L  +N +EA+ +D +FL  ++ EK  + +E EM  +HG+ +EKIN L P+KL  Y+ LL  ++  + E+ AR    + +   I   EA  + D     R EY  LE+ V RL++ER+   +D + + M+P +AR  LL+KVK D+ +++ L+     TT     + + L DL+S+L     G    +K E L  +DKEMT F+E F   +     DQ+  +  IV LLEHIS G+  +  +P  +   ++EM+ + TFK+RQL+SS  T +RL  + +KR  E++KV TLD KI +EL++L +KM  M  +M EF  +D L++  A+TK+HLL L+KQY  R +AMR QV  L+ + E   +E  + ET K L+ALE+K+R +E NIF LKE++++K RE+D++ L+ +C   +++LN    A +++ +    G+A
Sbjct:  611 PSGRPGTGQSLNPI-TGARPGTGQRGMLLSASGGRPLTGRLGTGQQAPATPGQTAGFGVSLNTEVNVSDRPVTQQGMMGMRTGTGSAGPGRQVQDASFFKGKLHSKTAEIAAEVEKLQREIEQDAKDKAQCAQLERKYETMALEVRDLEGQLADYNLAMDKMRSATDPAEIRQVQEQLHQRNAKEAEDVDRVFLMNKEQEKSVRNMEDEMTEIHGKHQEKINQLAPQKLQRYKELLDEHHQTEVEIEARSQELELVMHAIHQKEAELSSD---RYRDEYEALERQVRRLQKERDAAAEDAKTAQMDPNEARAVLLAKVKDDKSKMEALEGVLQSTTAEKQELTKALADLQSELDERASGSDPAHKYEALFAKDKEMTAFLEQFPAKREAETQDQRTSQGVIVQLLEHISAGMAKEDKLPGTNAANLEEMRRDLTFKERQLESSVTTKQRLTMELQKRQAELDKVNTLDAKIALELSSLLQKMDTMTADMGEFGKLDSLQEVHAQTKQHLLRLKKQYIGRRDAMRQQVTALSTQLENLVQESGSQETAKNLDALEQKLRHHEQNIFHLKEYIDSKSREVDYEHLKQDCFRNLQELNTLHVAQQQRQQQLNLGLA 1219
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BLAST of mRNA_P-littoralis_Contig200.114.1 vs. uniprot
Match: A0A662WLW1_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WLW1_9STRA)

HSP 1 Score: 395 bits (1016), Expect = 2.920e-119
Identity = 253/598 (42.31%), Postives = 373/598 (62.37%), Query Frame = 1 
Query:   97 PGSRGYVGGGLQPPGTGMRMATGQRG-------GRPMSGRMRTGQ-VTAGPSREAAYGVALSQEVKVTDRPVTQQGMSGMKTAGGGIGIGRQVQDGSYFIGVLRSKMNDIHAEVGRLRVEIERHEKDVSQQGHLERTYETMLQEVKTLEGTLADYNLAIDKARTTADPGEVTKYLHDLEDQNRREAQGLDEIFLAKQQNEKEAQELEVEMEAVHGRMEEKINTLEPEKLHEYRVLLQRNNDLQSEVAARQANADRLSSQIGHLEARSAGDGGAALRGEYHVLEKSVGRLRRERENLQQDLEISNMNPKQARERLLSKVKADQERLKQLDARTVETTDIVDRMKQRLEDLESDLKADKR---GDVSQNKVEVLQKRDKEMTEFIENFDQTKGGALADQQACRSTIVGLLEHISTGLESQHHVPDKD--RVKEMKEEKTFKDRQLKSSEATMRRLHQDKEKRLQEMEKVKTLDEKIPVELANLKEKMARMNGEMREFEDIDGLRDEAARTKEHLLGLRKQYRSRVEAMRGQVQQLAARHEACKKELAASETGKTLEALERKMRTYETNIFFLKEFVETKGREIDFQSLRGECMGMVKDLN 1851
            P  R   G  L P  TG+R  TGQRG       GRP++GR+ TGQ   A P + A YG++L+ EV V+DRPVTQQGM GM+   G  G GRQVQD S+F G L SK  +I +E+ +L+ EIE+  KD +Q   LER YET+  EV+ LEG LADYNLA+DK R+  DP E+ +    L  +N +EA+  D +F+ +Q+ EK  + +E EM  +HG+ +EKIN L P+KL  Y+ LL+ ++  + E+ AR    + +   I   EA  + D     R EY  LE+   RL++ER+ + +D + + M+P +AR  LL+KVK D+ +L  L+      T     + + + DL+S+L  D+R   G   + + E L  +DKEMT F+E F + K   L  Q+  ++ IV LLEHIS G+  +  +P  +   ++EM+ + +FK+RQL+SS  T +RL  + +KR  E++KV TLD KI +EL +L +KM  M  +M EF  +D L++  A+TK+HLL L+KQY SR +AMR QV  L+ + E   +E+AAS+T K L+ALE+K+R +E NIF LKE++++K RE+D+  L+ +C   ++DLN
Sbjct:  795 PSGRPGTGQSLNPI-TGVRPGTGQRGMLGSSAGGRPLTGRLGTGQQAPATPGQTAGYGISLNTEVNVSDRPVTQQGMMGMRVGTGSAGPGRQVQDASFFKGKLHSKTAEITSEIDKLQREIEQDAKDKAQCAQLERKYETLALEVRDLEGQLADYNLAMDKLRSATDPAEIRQVQEQLHQRNAKEAEEADRVFIMRQEQEKSVRRMEDEMAEIHGKHQEKINQLAPQKLQRYKELLEEHHQSEMEIEARSNELELVLHAIHQKEAELSAD---RYRDEYEALERQARRLQKERDAVAEDAKTAQMDPSEARAVLLAKVKDDKSKLDALEGALQVATTEKQELSKAVADLQSEL--DERASGGSKQEQRFEELFAKDKEMTVFLEQFPEKKAAELLSQRETQAVIVQLLEHISAGMAKEDKLPGTNAANLEEMRRDLSFKERQLESSVTTKQRLTMELQKRQAELDKVNTLDAKIALELTSLLQKMETMTTDMAEFGKLDALQEVHAQTKQHLLRLKKQYISRRDAMRQQVTALSGQLETLAQEIAASDTAKNLDALEQKLRHHEQNIFHLKEYIDSKSREVDYDHLKQDCFRTLQDLN 1386
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BLAST of mRNA_P-littoralis_Contig200.114.1 vs. uniprot
Match: A0A8J5M4D3_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5M4D3_9STRA)

HSP 1 Score: 385 bits (990), Expect = 1.710e-118
Identity = 250/603 (41.46%), Postives = 370/603 (61.36%), Query Frame = 1 
Query:  124 GLQP-----PGTGMR-MATGQRGGRPMSGRMRTGQ-VTAGPSREAAYGVALSQEVKVTDRPVTQQGMSGMKTAGGGIGIGRQVQDGSYFIGVLRSKMNDIHAEVGRLRVEIERHEKDVSQQGHLERTYETMLQEVKTLEGTLADYNLAIDKARTTADPGEVTKYLHDLEDQNRREAQGLDEIFLAKQQNEKEAQELEVEMEAVHGRMEEKINTLEPEKLHEYRVLLQRNNDLQSEVAARQANADRLSSQIGHLEARSAGDGGAALRGEYHVLEKSVGRLRRERENLQQDLEISNMNPKQARERLLSKVKADQERLKQLDARTVETTDIVDRMKQRLEDLESDLKADKRGDVSQNKVEVLQKRDKEMTEFIENFDQTKGGALADQQACRSTIVGLLEHISTGLESQHHVPDKD--RVKEMKEEKTFKDRQLKSSEATMRRLHQDKEKRLQEMEKVKTLDEKIPVELANLKEKMARMNGEMREFEDIDGLRDEAARTKEHLLGLRKQYRSRVEAMRGQVQQLAARHEACKKELAASETGKTLEALERKMRTYETNIFFLKEFVETKGREIDFQSLRGECMGMVKDLNE---AIKRKGETEGFGVA 1896
            GL P     PGTG R M T   GGRP++GR+ TGQ V A P + A YG++L+ EV V+DRPVTQQGM GM+   G  G GRQVQD S+F G L SK  +I  E+ +L+ EIE+  KD +Q   LER YETM  EV+ LEG LADYNLA+DK R+  DP E+ +    L  +N +EA+ +D +FL  ++ EK  + +E EM  +HG+ ++KIN L P+KL  Y+ LL+ ++  + E+ AR    + +   I   EA  + D     R EY  LE+ V RL++ER+   +D + + M+P +AR  LL+KVK D+ +++ L+            + + L D++S+L     G    +K E L  +DKEMT F+E F   K   L  Q+A +  IV LLEHIS G+  +  +P  +   ++EM+ + TFK+RQL+SS  T +RL  + +KR  E++KV TLD KI +EL++L +KM  M  +M EF  +D L++  A+TK+HLL L+KQY  R +A+R QV  L+ + E    E    ET K L+ALE+K+R +E NIF LKE++++K RE+D++ L+ +C   +++LN    A +++ +    G+A
Sbjct:  396 GLNPITGARPGTGQRGMLTSASGGRPLTGRLGTGQQVPATPGQTAGYGISLNTEVNVSDRPVTQQGMMGMRV--GSAGPGRQVQDASFFKGKLHSKTAEITTEIEKLQREIEQDAKDKAQCAQLERKYETMALEVRDLEGQLADYNLAMDKMRSATDPAEIRQVQDQLHQRNAKEAEDVDRVFLMHKEQEKSVRTMEAEMTEIHGKHQDKINQLAPQKLQRYKELLEEHHQTEVEIEARSQELELVMHAIHQKEAELSSD---RYRDEYEALERQVRRLQKERDAAAEDAKTAQMDPNEARAVLLAKVKDDKAKMEALEGVLQSAAAEKQELTKALADVQSELDERASGSDPAHKYEALFAKDKEMTTFLEQFPAKKEAELQAQRAAQGVIVQLLEHISAGMAKEDKLPGTNAANLEEMRRDLTFKERQLESSVTTKQRLTMELQKRQAELDKVNTLDAKIALELSSLLQKMDTMTTDMTEFGKLDSLQEVHAQTKQHLLRLKKQYIGRRDAIRQQVTALSTQLENLMHETVQQETAKNLDALEQKLRHHEQNIFHLKEYIDSKSREVDYEHLKQDCFRTLQELNTLHVAQQQRQQQLNLGMA 993
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BLAST of mRNA_P-littoralis_Contig200.114.1 vs. uniprot
Match: A0A421GI98_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GI98_9STRA)

HSP 1 Score: 379 bits (973), Expect = 1.880e-118
Identity = 233/550 (42.36%), Postives = 349/550 (63.45%), Query Frame = 1 
Query:  208 QVTAGPSREAAYGVALSQEVKVTDRPVTQQGMSGMKTAGGGIGIGRQVQDGSYFIGVLRSKMNDIHAEVGRLRVEIERHEKDVSQQGHLERTYETMLQEVKTLEGTLADYNLAIDKARTTADPGEVTKYLHDLEDQNRREAQGLDEIFLAKQQNEKEAQELEVEMEAVHGRMEEKINTLEPEKLHEYRVLLQRNNDLQSEVAARQANADRLSSQIGHLEARSAGDGGAALRGEYHVLEKSVGRLRRERENLQQDLEISNMNPKQARERLLSKVKADQERLKQLDARTVETTDIVDRMKQRLEDLESDLKADKRGDVSQNKVEVLQKRDKEMTEFIENFDQTKGGALADQQACRSTIVGLLEHISTGLESQHHVPDKD--RVKEMKEEKTFKDRQLKSSEATMRRLHQDKEKRLQEMEKVKTLDEKIPVELANLKEKMARMNGEMREFEDIDGLRDEAARTKEHLLGLRKQYRSRVEAMRGQVQQLAARHEACKKELAASETGKTLEALERKMRTYETNIFFLKEFVETKGREIDFQSLRGECMGMVKDLN 1851
            QV A P + A YG++L+ EV V+DRPVTQQGM GM+   G  G GRQVQD S+F G L SK  +I +E+ +L+ EIE+  KD +Q   LER YET+  EV+ LEG LADYNLA+DK R+  DP E+ +    L  +N REA+ +D +F+ +Q+ EK  + +E EM  +HG+ ++KIN L P+KL  Y+ LL+ ++  + E+ AR    + +   I   EA  + D     R EY  LE+ V RL++ER+   +D + + M+P +AR  LL+KVK D+ +++ L+    E       + + L DL+SDL     G    +K E L  +DKEMTEF+E F   K   +  Q+A +  I+ LLEHIS G+  +  +P  +   ++EM+++ TFK+RQL+SS  T +RL  + +KR  E++KV TLD KI +EL++L +K+  M  +M EF  +D L++  A+TK+HLL L+KQY  R +AMR QV  L+++ E   +  A+ ET K L+ALE+K+R +E NIF LKE++++K RE+D++ LR +C   ++DLN
Sbjct:  189 QVPATPGQTAGYGISLNTEVNVSDRPVTQQGMMGMRV--GSAGPGRQVQDASFFKGKLHSKTAEITSEIEKLQREIEQDAKDKAQYAQLERKYETLAIEVRDLEGQLADYNLAMDKMRSATDPAEIRQVQEQLHQRNAREAEDVDRVFILRQEQEKNVRRMEDEMTEIHGKHQDKINQLAPQKLKRYQELLEEHHQTEVEIEARSQELELVMHAIHQKEAELSSD---RYRDEYEALERQVRRLQKERDAAAEDAKTAQMDPAEARAVLLAKVKDDKSKMEALEGVLQEAAAEKQELNKALADLQSDLDERASGSDPAHKYEALFAKDKEMTEFLELFPAKKEAEVQSQRAAQGVIIQLLEHISAGMAKEDKLPGTNAANLEEMRKDLTFKERQLESSVTTKQRLTMELQKRQAELDKVNTLDAKIALELSSLLQKVDTMTADMTEFGKLDSLQEVHAQTKQHLLRLKKQYIGRRDAMRQQVTALSSQLENLVQATASQETAKNLDALEQKLRHHEQNIFHLKEYIDSKSREVDYEHLRQDCFRTLQDLN 733
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig200.114.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPE8_ECTSI1.580e-23284.27Intraflagellar transpot protein 74 n=1 Tax=Ectocar... [more]
A0A6H5JUN2_9PHAE2.270e-16066.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6V2XWW9_HETAK1.670e-14544.90Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A836CE00_9STRA3.760e-13151.40Intraflagellar transport protein 74 n=1 Tax=Tribon... [more]
A0A662XXK3_9STRA2.050e-12442.14Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
D0NIV2_PHYIT1.650e-12139.94Intraflagellar Transport Protein 72/74 n=9 Tax=Phy... [more]
H3HB40_PHYRM1.980e-12041.92Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A662WLW1_9STRA2.920e-11942.31Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
A0A8J5M4D3_9STRA1.710e-11841.46Uncharacterized protein n=1 Tax=Phytophthora aleat... [more]
A0A421GI98_9STRA1.880e-11842.36Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig200contigP-littoralis_Contig200:350687..366922 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FPE8
Preferred nameIFT74
Model size1907
Max annot lvl2759|Eukaryota
KEGG koko:K19679
Hectar predicted targeting categoryother localisation
GOsGO:0002064,GO:0003334,GO:0003674,GO:0003682,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005813,GO:0005815,GO:0005856,GO:0005929,GO:0006355,GO:0006357,GO:0006810,GO:0006928,GO:0006996,GO:0007017,GO:0007018,GO:0007154,GO:0007165,GO:0007166,GO:0007219,GO:0007275,GO:0007368,GO:0007389,GO:0007507,GO:0008092,GO:0008150,GO:0008285,GO:0008544,GO:0009799,GO:0009855,GO:0009888,GO:0009889,GO:0009891,GO:0009893,GO:0009913,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0010970,GO:0015630,GO:0015631,GO:0016043,GO:0019219,GO:0019222,GO:0022607,GO:0023052,GO:0030030,GO:0030031,GO:0030154,GO:0030155,GO:0030216,GO:0030705,GO:0030855,GO:0030990,GO:0030992,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031503,GO:0031514,GO:0032501,GO:0032502,GO:0032991,GO:0033628,GO:0033630,GO:0035735,GO:0042073,GO:0042127,GO:0042995,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043588,GO:0044085,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044446,GO:0044463,GO:0044464,GO:0044782,GO:0045785,GO:0045893,GO:0045935,GO:0045944,GO:0046907,GO:0048468,GO:0048487,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048731,GO:0048856,GO:0048869,GO:0050678,GO:0050680,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051252,GO:0051254,GO:0051641,GO:0051649,GO:0051716,GO:0060255,GO:0060271,GO:0060429,GO:0065007,GO:0070925,GO:0071840,GO:0072359,GO:0080090,GO:0097542,GO:0099111,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:1902680,GO:1903506,GO:1903508,GO:1905515,GO:2000112,GO:2001141
Exons14
Evalue4.79e-233
EggNOG OGs28JR0@1|root,2QS4E@2759|Eukaryota
Ec32 ortholog descriptionIntraflagellar transport protein 74
Ec32 orthologEc-14_004660.1
Descriptionbeta-tubulin binding
Cds size1812
COG categoryS
BRITEko00000,ko03036
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig200.114.1prot_P-littoralis_Contig200.114.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig200 350777..366917 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789984.746876-UTR-P-littoralis_Contig200:350686..3507761680789984.746876-UTR-P-littoralis_Contig200:350686..350776Pylaiella littoralis U1_48UTRP-littoralis_Contig200 350687..350776 +
1680789984.9251091-UTR-P-littoralis_Contig200:366917..3669221680789984.9251091-UTR-P-littoralis_Contig200:366917..366922Pylaiella littoralis U1_48UTRP-littoralis_Contig200 366918..366922 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789984.7617753-CDS-P-littoralis_Contig200:350776..3508491680789984.7617753-CDS-P-littoralis_Contig200:350776..350849Pylaiella littoralis U1_48CDSP-littoralis_Contig200 350777..350849 +
1680789984.7746174-CDS-P-littoralis_Contig200:351266..3514001680789984.7746174-CDS-P-littoralis_Contig200:351266..351400Pylaiella littoralis U1_48CDSP-littoralis_Contig200 351267..351400 +
1680789984.7876794-CDS-P-littoralis_Contig200:352837..3530411680789984.7876794-CDS-P-littoralis_Contig200:352837..353041Pylaiella littoralis U1_48CDSP-littoralis_Contig200 352838..353041 +
1680789984.7969387-CDS-P-littoralis_Contig200:353404..3535231680789984.7969387-CDS-P-littoralis_Contig200:353404..353523Pylaiella littoralis U1_48CDSP-littoralis_Contig200 353405..353523 +
1680789984.8062823-CDS-P-littoralis_Contig200:354013..3541131680789984.8062823-CDS-P-littoralis_Contig200:354013..354113Pylaiella littoralis U1_48CDSP-littoralis_Contig200 354014..354113 +
1680789984.8157876-CDS-P-littoralis_Contig200:354430..3545111680789984.8157876-CDS-P-littoralis_Contig200:354430..354511Pylaiella littoralis U1_48CDSP-littoralis_Contig200 354431..354511 +
1680789984.8248389-CDS-P-littoralis_Contig200:355128..3553261680789984.8248389-CDS-P-littoralis_Contig200:355128..355326Pylaiella littoralis U1_48CDSP-littoralis_Contig200 355129..355326 +
1680789984.836694-CDS-P-littoralis_Contig200:355706..3558741680789984.836694-CDS-P-littoralis_Contig200:355706..355874Pylaiella littoralis U1_48CDSP-littoralis_Contig200 355707..355874 +
1680789984.846889-CDS-P-littoralis_Contig200:362449..3626291680789984.846889-CDS-P-littoralis_Contig200:362449..362629Pylaiella littoralis U1_48CDSP-littoralis_Contig200 362450..362629 +
1680789984.8583398-CDS-P-littoralis_Contig200:363598..3637271680789984.8583398-CDS-P-littoralis_Contig200:363598..363727Pylaiella littoralis U1_48CDSP-littoralis_Contig200 363599..363727 +
1680789984.8689837-CDS-P-littoralis_Contig200:364480..3645131680789984.8689837-CDS-P-littoralis_Contig200:364480..364513Pylaiella littoralis U1_48CDSP-littoralis_Contig200 364481..364513 +
1680789984.886223-CDS-P-littoralis_Contig200:365219..3652941680789984.886223-CDS-P-littoralis_Contig200:365219..365294Pylaiella littoralis U1_48CDSP-littoralis_Contig200 365220..365294 +
1680789984.8969676-CDS-P-littoralis_Contig200:366120..3662401680789984.8969676-CDS-P-littoralis_Contig200:366120..366240Pylaiella littoralis U1_48CDSP-littoralis_Contig200 366121..366240 +
1680789984.9129767-CDS-P-littoralis_Contig200:366719..3669171680789984.9129767-CDS-P-littoralis_Contig200:366719..366917Pylaiella littoralis U1_48CDSP-littoralis_Contig200 366720..366917 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig200.114.1

>prot_P-littoralis_Contig200.114.1 ID=prot_P-littoralis_Contig200.114.1|Name=mRNA_P-littoralis_Contig200.114.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=604bp
MRPGSRGYVGGGLQPPGTGMRMATGQRGGRPMSGRMRTGQVTAGPSREAA
YGVALSQEVKVTDRPVTQQGMSGMKTAGGGIGIGRQVQDGSYFIGVLRSK
MNDIHAEVGRLRVEIERHEKDVSQQGHLERTYETMLQEVKTLEGTLADYN
LAIDKARTTADPGEVTKYLHDLEDQNRREAQGLDEIFLAKQQNEKEAQEL
EVEMEAVHGRMEEKINTLEPEKLHEYRVLLQRNNDLQSEVAARQANADRL
SSQIGHLEARSAGDGGAALRGEYHVLEKSVGRLRRERENLQQDLEISNMN
PKQARERLLSKVKADQERLKQLDARTVETTDIVDRMKQRLEDLESDLKAD
KRGDVSQNKVEVLQKRDKEMTEFIENFDQTKGGALADQQACRSTIVGLLE
HISTGLESQHHVPDKDRVKEMKEEKTFKDRQLKSSEATMRRLHQDKEKRL
QEMEKVKTLDEKIPVELANLKEKMARMNGEMREFEDIDGLRDEAARTKEH
LLGLRKQYRSRVEAMRGQVQQLAARHEACKKELAASETGKTLEALERKMR
TYETNIFFLKEFVETKGREIDFQSLRGECMGMVKDLNEAIKRKGETEGFG
VAY*
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mRNA from alignment at P-littoralis_Contig200:350687..366922+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig200.114.1 ID=mRNA_P-littoralis_Contig200.114.1|Name=mRNA_P-littoralis_Contig200.114.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=16236bp|location=Sequence derived from alignment at P-littoralis_Contig200:350687..366922+ (Pylaiella littoralis U1_48)
CCGGCAGGGAAAGAGAGAAAGGAAAAGAAAGGGCGAGCCGCCACGTAGAG
CAGAGGAAGATACAAGAGGAACACATACAGCAGCTATTCGATGCGACCAG
GCAGTCGTGGCTATGTTGGTGGAGGCTTGCAGCCTCCCGGAACCGGGATG
AGGATGGCGACAGGTGAGGTCAAACGCTAGATCCGCCGCATTTTCCCACT
TCGCCTGGTGGGTAGATCCGTCAGTTGGTCGGCTGCGCGGGTGTGCAAGG
TCGTTGCTCCATGCATGGCTCTCGTCGACACCTTCCTGGTTGAGTACGGC
ACGATATTTTCATGTCTCTCTCTTCCTCGCTGCCCCTCTCTCTCCCCAGT
GCAAACATTTTTCTTTGTTGTTTGTTGCCCCTATGATAAGCGCATGGGCC
GTTTTTCATTGTCGTTTTCATATTATACGGTCATGATCGTGCTGAAAACC
GCATGTATGATATCATACTCCTGTACCATACTACTTCGTCTGTGTGTGCA
CATTCGCACATGGGTCTTCGGATTCAACAACTCAATTTTGTCGCTTATCC
TGCATAAACCTGGTATATGGTGATATGCAGGACAGCGCGGAGGTCGCCCA
ATGTCCGGAAGGATGAGGACAGGCCAGGTCACGGCCGGTCCGAGCCGGGA
AGCCGCCTACGGAGTTGCCTTGTCGCAAGAGGTCAAAGTCACAGATCGAC
CGGTGACGCAACAGGTGATAACTACGCTCGCGTCTGCTCACGGATTGCAG
CAGTATACGGTTCGCTCGGCGCCACCCCGCACTCGGGTATCACGCATCAG
TGGCCTTGTACATCTCGGGATATGTAACAGAGAAAATCTACTGTACCCAC
TTGGGAAGAGTTTTGGGAAAATGACACTTGGTACTTCGTACATTATGAGA
GAGAGCGAGATGACTTTGGCCTTAGGAGAGGAGTTGGCAGAAATTAAAAC
ACACCTGGTTCGTTGCCAAAACAATATGATTGATGCTTCGCACAATCAAT
GTACTGCTGTATAACTTTGTAAGAAAATCCACCCCGCTTTAGGATTTCCC
GGTGAGAGATAGATCTACAGTAGGCAGGCTTTCAAGCGTTATCATAACTC
TGTTTTGGGAGAGAAGTTGTTGGCCTCGAAAAGGGCACAGCAGGAGTGCG
CGCAGTATGATCATCTGAAGAAAACAAGTCCTTGCAATCAATGGTACTGC
TGCATTACGGGCTGAATTAGGCTGTTGCATTGTAGCGGCTTTAGGTCGCG
GCAGGAAAAAAACGCGCTGCCCCGTCTCATCTGTGACGCCCCGTCTCATC
TGTGACGCGTTGTCAGCTGTCGAATGACTTGAGCCCCCCCCCCTTCTGGT
CGTATGGCTTGAACTCCAATCCAATTTAAACTCCAATCCAAGTTTATGAT
TTCACAGCAGAGGGGAGGCTTGGTTGTCGCAGACAAAAGAAAAACCGTGT
TCACTGAAATAATTGACAAAGAACACGGTCCAGGGACATAAAATACTGAA
ATGACTGGGGTCACACACCCTGCCACTCCTTCGAAGAAAGGTTCACGTCA
TCACGGGTCGTACCCGCTAGAGAGCGTGAGATAAGATGGTAGAAGAGGTG
GATAGAAAGGGAAACTCTTGTGGGGCCAGGTTGGGTTGTGATCGAGTGCG
TCTCTGTGTCTCTGTGTGTCTTTTCCCGCCCACCCATCCTTTTCTTTCGG
AGATGGGGATAGAAACAAGATAGCCTTGTATTTCGTGGTACCATTGGCGC
AGGAAATGGCAGGTACCATGTGGGAATCGTTGACCTGAGAATATTGAGTA
GTAGTCCCCTACACCGGAAGGTAGTGGTTTTACGAGAGAGAGAGAGATAG
GAAGAGAGAGAGATAAATGTTGACTAGCGGAGACACAGAAAAATAAGACA
GACCATGGTTGACGCAAGCGTGTCTCTGCCAAGATGGCATTTCTCTCTCT
CTCTTTTTCGTCCTTCGGGCGGGAGAAAATAATATAAGGAAATTCGGAAG
AACGAAATAACAAGAATAAACACATGTCACATAATACAAGTCCTATCCAC
ACATAATATCTCCCACCCACTCCCCACCCCCACGCACGAACCCTTACTGC
TTCGCAATCACAAACACGAAACCTTTACGATTATGACAACCATGAAAACA
GGGAATGTCGGGCATGAAAACAGCTGGCGGCGGCATCGGCATCGGCAGGC
AGGTCCAGGACGGGTCCTACTTCATCGGCGTACTCCGGAGCAAGATGAAC
GACATCCACGCCGAAGTTGGCCGGCTGCGGGTGGAGATCGAACGGCACGA
GAAGGACGTCTCGCAGCAGGGGCACCTAGAGCGCACGTACGAGACGATGC
TGCAGGTACTACGACAATCTGTTCTCCAAGCTTTGTAAAGTAGGCGCTCC
CGTTTTATGGCGTGAAAATTCTAACAAAACACGTACTTTGAGTATGTATT
TACGCATGTTTGTATGTATGTATGTATGTACGTATGTATGCATGTACGGT
ACGCCAAGAGGTTATCGACATCACTACATGGAGATAATCGCTCATTTTTT
GTCATGTGTATATAGAAAAAAATTCCCGTGTGACCTTCCTTCTGTGTGAC
CCCGGCTAACGCACCCACTTTCATGCCGAAAGGTGCAGACTGTTGCCCAG
AATGAATGGGACGAAAATATACCACACATATGGTACTGTATGATGAAACG
TGACTTTTTACTTTTCAGGAGGTGAAGACGCTGGAAGGCACCTTGGCAGA
CTATAATCTGGCGATTGACAAGGCTAGGACCACCGCGGACCCCGGCGAGG
TCACCAAGTACCTGCACGATCTGGAAGATCAGAACAGGTGTGATACAGGA
CGTTTACAATTTACATGGTATTTTTTTCAATACCTGGTCCTCTTTTGTGG
TGTCTTTCATTTGGTCTTGGGTTACATTGGGGCGACATTCAACGTCTACT
GTAGCATTTGGGTTTTCTTGTCTCTCTGGGATTGCGCTGCTTGTGAGCAC
CGCTTCATGCGTGTGCGCACTATCGGCGGCGGCACGACCCACCAAGTAGT
AAACTGTGACGACCATGATGGTGGTGGTGGTGGTGGTGGTGGTGATGGTG
ATGGTGATGGTAGGGGGGGTGCGGTGTTTCCCGCGAAGCAGACGTGGCCG
CAATCGCGTACGTAAGTCGATGGTGTTGACCGCCACTAGCACCTTCCTTC
CTTCCTTCCTGCCGTCCTTTGCCTCTCTCCTGTTTCTCTCGGACCAAACC
GCGTCACCGGCGGCCGGCGGCCTGCTGTCATTTTGCGTACCATACTCCCT
TGCAATTCAAAAAACAACACGCACAAGGCGTGAGGCCCAAGGGTTGGACG
AGATTTTCCTCGCTAAGCAGCAGAACGAAAAGGAGGCGCAGGAATTGGAG
GTGGAGATGGAGGCGGTGCACGGACGGGTAAGCAAGCAGCATTCCCCGAA
ATCGTCGTGTGTGTATATTTTGTGGTACAGGTGTACTGGTGCTAGTGTCG
TACTGCAGGGGTACAGCTGTATTTATTGTGGTACATACGTATGTATGATA
TCATGTTTATGATGCGAAAAAAAGTGTTGTGCTATCATAGAAAAACAACG
TCTGCTGATTTGTTTTTAGGACATGGTCCTGAAGCTGACGACTGCTGTGT
ACAAGTACGGTATTCGATTGCTGCAGGTTACATACATACCCAACAACCCT
TTTTTTTGTTTTGATACGTGGTTGGTGGAACGAACGACGAGCAGATGGAA
GAGAAGATTAACACCCTGGAGCCGGAGAAACTTCACGAGTACCGCGTTCT
CCTCCAGCGCAACAACGACCTCCAGGTACACTTACAAAGTGTGTGTTTCC
ATGCGCGGAAATTTGCAGCAGCATTCATCATGATGAGTTGGGCGAAGGTG
TTTCGTGCGCGTGCATACAACGGATGCCCATCAGTACCCGATACGCTAAT
ACTTCGTATAATTTGTTACATATCGTGCATATTTACGGGAGGATGACGGA
TCGGCAGGAAGAGGCGGGGGGGGGCGGGAGAGGGGTGGCTCGGGCAGACG
ATTATGGCAAACACATCTCCGGTCAATCCCAACAATTACTTGCTCGGTTT
GAGGTTGTCCTAAACGAAAACTCAGACGCAATCCAAGTACATGGGATGTG
TACCCGAACACATCGGAGGGCTCTGCCCGAATGTGTCAGAGAAAAACGTG
CCCCCCTCGCTTTCTTCGCGCCCCTGTTACTGGTTATCACCGTCCAGTGT
CCCCCACACCTGCTTCCTCTCAATGTTGCCAATAGTCAGACAACGCAAGG
AAGCTACAAATGAGTATCCCCCCCCTCCAACACACACAGCTGTTCCGCCC
CCcgCCCCCCCGCCCCCCGCTCCACGCCCCACTCTGTCCACTTCTCCCGC
TGTTTCTCTCCCGTCGTCTGCTTTGTTGGCGGTCGGTGGCAGTCGGAAGT
GGCCGCGAGGCAGGCAAACGCCGACCGCTTGTCCTCGCAGATCGGCCACC
TCGAGGCCAGATCGGCGGGCGACGGAGGCGCGGCTCTGCGCGGGGAGTAC
CACGTGCTGGAGAAGTCGGTCGGAAGGCTGCGGCGGGAGCGGGAAAACCT
CCAGCAAGACCTCGAGATTTCCAACATGAACCCCAAGCAGGTACCTTAAG
AAGAAATTGGGGAATGGGGGGGGTACCTGCGTGGTTGCGAGTTTCTCATG
CATTCGGCCCAGATGGATTGGATTGGCTGACGTTTTGGTCGCTGTCGTAT
CTTCAATCCAATTTCTGTCCAGCGCATACGTGATTCTAGTATCAATTTTT
TTAGCTTATCCAGCCCCGCCATTCTGCTGCTAACCCCAAAAGTATGACAC
AGCTGTTTGCACGGAGATTTGTTTTTTTAGATCACACCACCATATCACAT
CACATCACATCACATCACATCACATCACATCACATCAAATCACGTGAAGT
CACGTCACCCCGCGGCGTCGTCACACAACTACTTGTCACTCACTCACTCA
CGCACGTCCTGTCCGCTCAGGCTCGAGAACGCCTTCTGAGCAAGGTTAAG
GCGGACCAGGAGCGGCTCAAGCAGCTCGACGCGCGCACGGTGGAGACAAC
CGACATCGTGGATCGCATGAAGCAGCGCCTCGAGGACCTGGAGTCGGACC
TCAAGGCCGACAAGAGGGGAGACGTGTCGCAAAACAAGGTGCGGTGAGTG
GTTGTTGCCGCGTGAATACATGAGAAGGGGGGGGGGGGGGGGGGTGTTTG
GGGTACACGGTACTCGATTCGTATTATGTGGAACTCTGGGGATGCGTGTG
GTGTATGGGTGTATGGCGGGGCCCCTGGCTGGGCTACACCGCTGTATACT
CACTCGTCAAGAATAAAGGTCTTGAGTCAACCTTCTTTCCTCCTTCGGCC
TCTGACGAAGCTTTCGGCACCAAACACGATAATCGTAGGCCTGTGTCGCG
GCGGGGTATTGGCGTTGGAGTTGTCGTGGAACCGTGGTCCGGGCGGTGGA
ACGGTATTTTTGGGTTGAAGCTGGGACGGCACTTCGAGAGGTCGGGACAG
CGATGGGTTTTGGATTTGTAGCTGGGACGGCACTTCGAGAGGTCGGGACA
GCGGTGGATTTGTAGCTGGGACGGCACTTCGAGAGGTCGGGACAGCGGTG
GATTTATAGCTGGGACGGCACTTCGAGAGGTCGGGACAGCAAGTGTATTA
TTTTATAATGACGACGACAAGGAGTAGTGAGATTGAGGCGTTGAGAGCGG
AGCTGGAAAGTTCGCGGCAAGCAATGGAGACAGCACAGCAAGCAGCCGCT
GATTCAGAGGCAGAAGTCGCGCGTATGCTGGCGGCTGGCGAGTCTGTCAA
CAGGCCGGCAACTGGTGAGGCAGCTGGTCATCAGGGTGGCACTACCAGCA
GTGCGCCCAACACGGGAGTCGTGCGACCTTGGGGTGCGGACTTCACAAGT
GAGTCGTCTTCGAGGAATTTTCGAGTTGCTCCTCCCCCGAAATTCCCGAC
GACCTACTCTACATCAGCGTACATAAATTGGGCACGCCGCGTGAAGAATT
ACCTGATCACCGCCGGCATTGGTCACGCCATCGAGCCGAATGCGCCAGCT
ATTCCTGTGATCAGTCGAGGCGACGATGAGTACCTTGCCCATCAGTACGG
GGCAGCTGTGGTCAGGGACCACCGCCGAGCGTGGTCGATTCTATCTGAGA
CAACGTATGATGCACCTTTCGAGGACAGTCTTTACAGCTGTGACTCTGTG
AGGGATGTGTGGGTTTTCATGGAGGACTGGTGTCTCCCGAAGATCAAGGC
GGAGAAATTTCTGCTGTCTCAGCAGTTCGAAACCTTCGAATTCAAGGAGG
GCGAGGACCCCGGAATGGTTTTGCGGCTTTTGCTCAACTCGAAGCCACCA
TGCGTGCTTGCGGCTGCGAGAAGAGCGAAGAGGACACCGTTCACGTTCTC
CTCCGGCAGCTCCCCGATAGTTACGACATAGAAAAACGAGGCCAGCTGGC
CATTCCGAATCTCACTCGCTCTTTCCTGGAGTCAGTCGTGCGATCCTCGT
ATGCGACCCGCAAGGCGAACGCACTTGCCAAGCGACGACTGGCGCCTGCG
GCGCCGGCGGTCACTTCGAATCCGCATGCTCTCGCTGTGGGACGTGCTTT
TGGGGGCGGGGGACACGGAGGATACGGGAAAGGCAGCGGTGGCCAGAGGC
AGTACGCCGGCGGAGGTGGCGGCGGGCGCTACACCGCTGGTCGGGGGGGA
CAACAGCAGCAGCAGTGGCAGCAAGGTGGTGGACGGCAGCAGCCGCAGCA
GCAGCAGCAGCAGCAGCAGCGCCCGCAGCAGCAGTTCCAGCAACAGCAGC
CGTGGCAGCAGCAGCAGCAGCAGCCCGCGCCCGCAGCAGCAGCAGTGGCA
GCAAGGTGGTCGACAGCAGCAGCCGCAGCAGCAGCAGCAGCAGCCTTCCA
ACCAGTCAGGTGGGAGATTCGGTGTTGGGGGCATCTACGACAACGGAAGC
AACTCCGTGTATTTCCAGCCGAAGTCTCCAATTCCTCCAAATATTCAGCA
GGGAGTAGAGTACCGTTGTGGTCGGTGTGGCAGGTCTGGGCACAAGCCCG
AAATTTGTGCGGCCCCGCGGCGGTTCGAGGGACATTGCGGGGCGTGCACC
CAGTTTGGGCACATGCGAAAAAATTGCGCCATCAACGGTCTCTCGGCATC
GCCGGCCGCACCACCGCATGTCCATGCTATCGCTCCCGCCGGCGCTGCTG
GTAGCGCTGCAGCACACGGGTGGGGAGGCGGCGGCAGCGGCGCCTTGTTC
TCCCAGCAGCTCGTCGTGGATCAGGGCGGCGACGACATACCTTTACAGCC
GGGCGGGGAGGCGTATGGCAGTGGGGTGGATGGCGGCGGGGTTTCCCGCG
AGCTCCGGCGGACGGGCAGATGTCCTCCGCTGTTGTAGCTCAAAACAGTG
GCGACGGTGTTGGCGACGGATGGAACACAGGATTGGCGCTGCAGCAGCAG
CTACCCGGGCGTGAGCATCAGCAGCATAGCGACGGTGAGCAGATTGACTC
TTCCGCAGACGGGGACTCCGGTGGCGTGATTTGGGGCGGAATGTTCGCGC
TTCAGCTATACGCTGCCTATGCGCCTCCCTCTCAGGTTTTCCAGCCGCGA
CCGGGGGCCTCTTTTTTCTGGGAGACACGGGCGCGGTAATTCATGCCGTT
TCCAACGATGAACACGTCTATAATCGGCGTGCGCCGCGCCGCGGAGAGAC
GCTTCTCATGGTGGGTGACGGGGAGTGTCTGCCTGTATCGTGCTTTGGGG
ATTTGGACCTGGTGCTTCATTGCCGTTACGACGTGCGGGTGACTCTGCGC
AACGTAGCGGTCGTCCCGAAATTGGTGTTGGATGTCATCTCGTTCAGCGT
CATCCAGAAGGCAAAGATACCAATACTGCTGGATGAGAGGGGGCGACGCT
GCTCGACGGCAAGGTCACCTTCGCCATGCACGAGAACGGTAGTTTTGTCG
AGGGTACTCGTGTTCCCCCAGTACCCGTTCTCCGCCGGCGCCGATTGTTG
CGGCCGTGATGCGGCCGGGCCGGCCCAAGAGCATGAATGCGACGAGCGCC
GTGCCATCGGCGGCGGCGGCGGCGGCGGCAGGCGGCGGCGGCCGGGGCAC
CTGCGGGGGCTTCGCGTGGGGGGGTCTTCCTCCCGCGGCGAGCGCGGTGC
CATCGGCGGCAACGGCGGCGGTGGCGGCGGCGGCGGCCGGGGCGGGGGGT
CTTCCTCCCGCGGCGAGCGCGGTGCCATCGTCGGCAACGGCGGCGGCGGC
GGCGGCGGCGGCACCTGCGGGGGCTTCGCGTGGGGGGGGTCTTCCTCCCG
CGGCGAGCGCGGTGCCATCGGCGACGGCGGCGGTGACAGCGGCGGCAAAG
ACGGCGGCGGCTGAGGCACCTGCGGAGGCTTCGCGTGCGGAGGGTCTTCC
TCCCGCGGCGGGCACGGTGCCACCGGTAGCAGCGGCAACAACGGCGGCGA
CGGCGGAGTGGGCAGATTTCATGAAGGACCACGGCGGCGGCGTGCGGATT
GCGCGGGCGGCGGGAGGTGATGGAGGTGATGCAACGGCGAGTGCCGGCGC
GTTACCTGCTACTCTACCTGCCCCTCCCCGCCCTGCGGCCACGCCGCCAA
CGCCGATTGAGGATTGGGGCGAGATGGTTCATGCCGGAGCGGGCAGCGAT
CGGGCGCACGGGCGCCAGGAGTACCGGGTGATTCCCAGGGTGACCAGGGC
GGGCGCGAAGCGGAGCGGGATGACGCCGGGGGCTTTTGCACTGATGGCGT
CGCAGGATGATATCGAGCGGTCTCTCGCCACCGAGCCTCTGCCGGGCACC
GTTTCGCCGGGGTTACCGTCTGCGCCGGCCTGCGACCTCGACACACCGGC
GTCGTACGCTGAGGCGATGGCAGGGGAGCACAGGGAGATCTGGGGAAGTG
CGATGGACGCGGAGTTTGGGGGCTTTCGGCGTCGGAGACTTTTCAGGAAG
CGGCCGCATCCTAGCAACGAGGGGAGAACATCATCACGGCCAAATGGGTG
TACAATTGGAAGGTAGACGAGTTTGGAAATGTTGTACGTGCCAAAGCTAG
GTTAGTGGCTCGCGGGTTTGCGCAGCGCGAGGGTGTTGATTTCTTTGAGA
CTTTTTCCCCTTGCCCCTCTGTTGCGAGCATCCGTCTGTTGGCTGCTATC
GCGTGTCATTTAGGGTGGGACCTCTGTCATTTTGATGCCGAACAAGCGTT
CGTTCAATCCAAACTCGCTGAAGATGTGTTCATTCGTTTGCCCCCTGGTT
GTGGTACGCTTTCTGGTAAAGTGGTGAAGTTGGGACGAAGTCTTTACGGC
TTGCGGCAAGCGTCACGCACGTGGCACCAGCATCTGATGCGTGGGATGCA
CCTTCTAGGTTTCGAATCGTGTGCTGCTGATGCCTGTGTGATGCGCTTGG
TGGAGAACGGATCGGTCTCTATGGTGGTGGTTGTGCACGTAGACGACATA
TTTTCTATCGGACGCAAGAGCAGATGTGACCAGTTTGGTGTGGACCTCAA
CCGGTATGTCCCCATTTCCAACCTCGGGGAACTGCGCTGGTACGCGGGCT
GCCGTTTTTCGCGTGATTCGGTGTTGGAGACGGTGACGATTTCACAGCAG
ACTGTAGCAGAGAAGATCGTGGCGAAGTTTGATGTGACAGAGAGCAAAGA
AACGCCGATGCTGGTTGGTTTGAAGCTTGAGCAGTTCGATGAAGACGAGC
CGGATGTAGACGAGCCTTTTCGGTCGTTGGTGGGGCACATGATGTGGCTG
GCGAATCAGACTCGTCCGGATATTCTCAACGCGGTGCGGGCCGTGGCGAG
GTATTCTCACGCGCCGAAGCTGGTGCATTGGCGGGCGGCGTTGCATGTCT
TGATGTATGTTCGGGGAACCACTGATTTCGGCATCACTTTTCAGAGAGGT
GTACCAGGAGGACAGCACATGGAGCTTTTTGTCGATTCGGATTTCGCCAG
CAAGGCAACCGACCGGCGGTCTGTTTCTGGTGCGGTGGTGATGTTTGCTG
GTGCATGTTTGATGTATTTGTCTAGGACGCAAAAGAGCGTCACACTCTCG
TCGACGGAGGCGGAGTACGTAGCCCTAGCTGAAGGGGTGAAGGAGGCGAT
TTTCTTGCGGTATGTCTGGAATTTTATCTTTCCGGACCTCGATGTAGGGT
GCACTTTGGTCCACGAGGACAACGTCGGGGCCGTTTACCTGGCAAGCAAT
CCGGCCACAACCCCCAACTCAAAGCACATCGACATCAAGCACCATTTCAT
TCGCGAACGCGTGGTACGGGGGGAGTTCAGGGTAGTTCACGTACGTTCTG
CGTTGCAGCGTGCTGATTTCTTGACCAAAGCACTGCCCAAAGACGCTTTT
TGCGCGCACCGTGACTTTGTGATGAACATTCGGTGATTTGTGCGTGTTGC
GTTATTCGCCCTGAGTTTCTAACCGTTCTGCGGCTATCGTCTCTGTTTTT
GGCACCGCAGCATGTATGTTGtTTTTCTCTGTTTAAAATCACGGGGGGGG
GAATACTGTGCCATGCTTTTATGGTTTTTTTTTTTTTTTGCAGAGTTCGC
AAGCAGACTTGTATTATTGTTCTGAAGGGATGCCACAGGAGGGGGGCTGT
TGGGTACTGGTTTATGTATAAGATATTGAAGCTGCAGTCGCATCGACGAA
GGTTTTTGCTTGACGCCTGTTGTTGTCATCGTACACGTTGAGATTTTATT
TCATTGGTTCACTGGTTTTGCTTTTTGTGGTGCATTTTGAAGGAGGGATT
TGACATGTTTTGATAAAGTACGGTTGGAGCCGTCGTGCTTCCGAAGCTTG
TTTGAATTGGTCGAAAAAAGTTGAATACTGGTTTTCACATTTATTTCTGG
TATTTCGACGGATTGGGAACATATGGGAAAGCGAGGTCGCGGTTCGTGGA
TACCATTTTCTCGAGAGGGTTTCAATTGTCTGTTGACGGACCTTTCGTAG
GGGATACTGATTTGACATCAGAAGATTCGGAAGACGTTTTGGACCGGAAT
GATTGATGAATTGAAGAGTGTTTGAGGTTTGGATTCATTGCCGTTTTACC
TGGCGATGAAGATATGAGAGGAGTTCTGCAAATCGTATCGAGCACCGAGT
AGGGGGGCTGTTTGGGGTACACGGTACTCGATTCGTATTATGTGGAACTC
TGGGGATGCGTGTGGTGTATGGGTGTATGGCGGGGCCCCTGGCTGGGCTA
CACCGCTGTATACTCACTCGTCAAGAATAAAGGTCTTGAGTCAACCTTCT
TTCCTCCTTCGGCCTCTGACGAAGCTTTCGGCACCAAACAGGGGGGGGGG
TGTTTCCTTTGGGAAGGGTGTCATGAGATGATGTAGTGCGTCATCATGAA
TGCAATACAGGCAATGATATGGTGTGACGCGTTACCCTTGTGCTGTAAAA
TCACTAGTTTTTGCTGGAAAGAAAGTTTTTTTCTTGGGATGTTGTCACAC
AGGCACACACAGAGAATGGCCCACTGCTGTGCTGTATGGCCACAATGAAT
AGAGTACACAGAGGCAAAGCCGAACCAAGCGGAATGAAATGCAATTGAAC
CATATAATTCAAGACGAGATGACGTAACAACGTGAAAAACGAAATGATTT
ATTTTACCAGACAAAAAAAAAATATATATACGAGTACACATCTACTTCGA
AGTAATCGGAGTATATGTTTCGTATGTATGATATCGCATATATATCTCAA
ACGACGGACGAAGGTGGAGGTGCTGCAGAAGAGGGACAAGGAGATGACGG
AGTTCATCGAAAATTTCGACCAGACCAAGGGGGGGGCTCTCGCCGACCAG
CAAGCGTGCAGAAGCACCATCGTCGGCCTCTTGGAGCATATCAGCACGGG
CCTTGAGTCTCAGCACCACGTCCCCGACAAGGATAGAGTAAAGGTGAGGG
GAGGCTTTGCGTTCTCTTTGGCTGTCGTTCGGTCCACCTGCCTGAATGTC
CGTCTGGCTAAAGGCTATCTGCTTTCCGTATCGGTCAATCTGTGTGTCTT
ATCATTCCGTCTGCCCGTCCGTCTGTCTGTCTGTCTGTCTGCCTGTCTGT
CTGTCTATCTGTCTTTCTAGCCGGCTGGCTTTGAGACTTTTTGTTGATCT
GCGTACGCAGTATCTGTCTATCTGTCGATCTGTATATTTGCTATTCCGTC
TGCCTGCCTGTATGTCTGTCATTCTGTTTAGGTGTCTCAGACAGTATTCT
CCTGTTGGAGCTACCAATACCAAGTCTTTAGTCACCGCGCGTTCGCGATG
CTTGGAATCGAAGATCCGTTCCCGTTTCTTGGTGAACAGGCGTGACTCAA
CACCGATACTCCCGAGTTAGTTACACTCGGCGGGCCCACAGCAACACAGT
TCTAAACCTACTACGTTCGGGTTTCTCCCTGCCGATGCCACTTTCCAATT
TTCCGAGCACTTTTTCACCTCACGCATTACAACGCCTCCGAAGGAGCAAG
CTTGTCCACACTTGTCTTAGAAACGGAGTTTCAGTGTTTCCCACTTTCAG
ATGAAGAGCGTCTTGTTCAAGTACGTGTTCATGATATCTGTCTCTCTCTC
TTTCTCTCTCTCTGTCTTCGCTCGTGACCTGTATATCCCTCCTCCGCAGA
CTCAGCCTGCGCTTCTCTCTCTCCCCTCTCGCCCCTCTGTCTTGCCCTCC
GCCCCCCTTATCTCCCGCGCTCTCCGCCCATCTCTGTCTGCGTGTTCCTC
TGACTTTCTCCACCCCCCCCTCTACCAACAACCCAATCGCCCCCCTCTTA
CAACAACGCGTACGGCATGCGTTGACTGGGGGTAAAACAACCGATCAATC
AATCAATCAATCAATCAATCAACCAAGCAATCGATCGACCACTCGATTGT
ACTGCTGTCCAGGAAATGAAGGAAGAGAAAACCTTCAAGGACAGGCAGCT
CAAGAGCTCCGAGGCCACCATGCGGCGGCTGCACCAAGACAAGGAAAAAC
GCCTGCAAGAGATGGAGAAAGTCAAAACCCTCGACGAAAAGGTGACCGTT
GCCGCCCGCCACCGCGATCGATCGAGCGCGTGTGAACTGCTGTGGTTGGT
GATCAAAATAAATAAATAGACGGAATAGCTCGTGGTCGCGCTCGATCATC
GGGAGGAAGGAAGGGAAAGAGGGAGGGAGGGATGGAGAGAGAGAGAGAGA
GAGAGAGAGAGAGAGATAGAGAGAGAGAGAGAGAGAGAGGAGGGAGGGAG
GGAGGGAGGGAGGGAGGGAGGGAGAGAGAGAGGGAGAGGTGTGGACGCAT
AATGTGAGGGCAGGGGGCATGGAGAAGGCGATGATGCATGAGAGTGGCTG
AGACCCCAAAGTGTGGCCGAGACATGGACATGGCTGGAAATGGGCGCACC
TGCGATAATTACCGCCTCTCACAAGTTCTGTGTAATGACTTTCTCATGGC
GCAACTTTAACTTCTCCCGTTTTTTTCCCGCTAATTTTTGTTTTTGTCGT
CGGGAATTGACTACTTTATTGCGTCCCCGCCATGTATATGCGTGCTACCG
TAAGCTCTTGCACGCCTACCTTAAGAGCTGTCGATCCCCCGATGGCATCT
ATCTTGCTCCCCGAGCTCTGCCCTGTTTGTCTGCCTCTCTGCCTGTTTGC
GAAATAACAGCGCTTCAAAACCTGTCAAAGCTTGTGTCAAAAACAATATA
ACAAAAATGGCGTTGCCCGCGCGTCTGTCTGTCTGTCTGTCTGTCTGTCT
GTCTGTCTGTCTGTCTGTCTGTCTGTTCGTCGATCGATCACCAGATCCCG
GTGGAACTTGCAAACCTCAAAGAGAAGGTGCGCGCCGTTTTCATCAAAAG
AGGCGAACATAGCACACATAACGTTGGAGGTGGTTCTTGGTGTCTCACCC
ACGAGAGTTTGTGGTGCACGGAAGTGTGGGGTATTTTTTGGTAGTTTGAC
CAAAAATATGTGGTAAAAACAAAACTGTGAACGGAGCTTGAACTTGCTTT
TTTAATTCACGAAGAGGCGCGATTCTTGTATCATATGATATGTATATACG
AAGTGTAGGTTGTCGTCCGAAGAGGTGCATGAAGCAGGGTGTATGTGTGT
GACAAAACACGAGGCCCTCGCTTGGTCGTTGTCCGTAGACTACTTTCCGG
CATGAAGAACCTGCGTTGCTCTTGATCCATGTATTTGTATATGGCTCCTC
CTCTTCCGGTTACATTCAATGCTGTGAGAAATAATGCACGAGACCGAACC
CCGACACCTGTAAATTGTGTATGGAAAGCATGTCGTATGTCTGTTTTTTT
CTTGCGGGAATCGTTTGGGCTTGAAGCCTGCTGTTGTTTCCGGTCGCACT
TCTCCTGTTCTAAGCCCAAAGAGTGTGGCCGGTCGTAGTTTTCCAACGTT
TCCCCGCATTCGTGCGACGGCAATGACCCCACCACCAAACATCACCACCA
CCACCACCACCACCACCACCACCACCACCACCACCACCACCACCAACAAC
AACAACAACAACAACAACAACACAAAAAAACAGATGGCTCGGATGAATGG
AGAGATGAGGGAGTTCGAGGATATCGACGGCCTGCGCGACGAAGCCGCTC
GAACGAAGGTGCGTTGGCCGCGTGGGTCGTGTGTATTTTTCCTGTACTTG
CTCAGCAAGGTCCCGTGACGTGTGTTAACTTTTATATCTAACCCGTTACC
GCAAGTCGGCCAATATTTTCTCTCGTTGCTACGTGACGAGGAATGTTGCT
GACTGTTGTTGACTCTCGCAGTAGCTCACCACCACCGCAGTCTAGCCCGT
GGTCACAAACCAGACATATATCGTGCTACCGTATGATAGGAGGAAAAAGA
AACAAAAGGAAATGAACGATAGTCACCCAATCAAAATCAGATAGGGTACC
GTTGGGGCACCCACCATCTGTGGTGCCAAAAAGCACAAACCTTGCCCTGG
CGGATTTTACCGCAGCCAATCATGGCTGACCTTGACGTGCGCTCTACATT
GAATACCGGTCAATTCATAGATACGCGGCATGGTAGAGTGTACGGCAAAG
TGGCGCTGCCGGGCACACCCGTCGGACACGTGGGAAACAGTTCGCACGAG
GAAGTGGCGCCGCCGGCGGGTTGGGTCGTATTTCAGTAAAACTCGGGCAG
GGAACGGGAAAGGGCCATTATAACCAGATACATAAATGACGGATCGAAGA
GGAGGGGGGGGGGGAGGGGGGGGGGGATGGGGGCAGACTGTGTGCGTTTG
TTGTTTCAAAACGGCTCCTTTCCCCCGTTTCTTTTTTTTTTTCAGCAGTT
TCGGCGTTTCATATTTTGTTGTGATCAGGCCACTTATTTACGGTAGGTTG
TGCCAAACTTAATGTGGAAAACGCCCTGATAATCATGGTTTTCTGTTATT
TTTCCTGTTCTTGTTCCTGTTCTTTGTCGCGCAGGAACACTTGCTGGGGC
TCAGGAAGCAGTATCGCTCGCGTGTGGAGGCGATGCGGGGACAGGTCCAG
CAGCTAGCCGCGAGGCACGAGGCCTGTAAGAAGGAGTTGGCTGCCAGCGA
GACCGTAAGTTTTGTTGTTGTTGTTATTGTTGTTGTTGTTGTTGATGATG
TTGCTGTCGTTGTTGTGAGCTATCCGGACTACTGTCCGTTCAGTTTACCC
GCCGTTCGGTAAGCCCCGGCGTTCTGCGACAAAAACAGAACCCCAACCTT
GGGAGCAGTACTACTTTACTAGTGGGAACAAAACATGCTACAGGAATCTC
GGGAACGCTCGAGGGGGGGGACGCGAAGCATGTTGCATCTCCGTCTCTCG
TCCGCACCCCCCACCCCCTCCCCCCTCCCCGCGTTTCTCTCCCTCCTCTC
AAAACCCTGTCCACCCGCTTCGATCGATGTTTCTCCGGGGGGATACATTA
AAAAGTGAAAAAACAAACGCGCTCACGTACACGCACATACACACATACAC
ACAATTCACATATCGGACACGCACACACGCACAAACACGAAGACGCACGC
ACGCATGGCACATGATACGTGATGGACAATCAGGGTAAAACTCTGGAGGC
CCTGGAGAGGAAGATGCGCACGTACGAGACGAACATCTTCTTCCTCAAGG
AGTTCGTGGAGACCAAGGGGCGGGAGATAGACTTCCAGAGCCTGAGGGGC
GAGTGCATGGGCATGGTGAAGGACCTCAACGAAGCCATAAAGAGAAAGGG
GGAGACCGAAGGATTTGGCGTCGCGTACTGAAAGCC
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Coding sequence (CDS) from alignment at P-littoralis_Contig200:350687..366922+

>mRNA_P-littoralis_Contig200.114.1 ID=mRNA_P-littoralis_Contig200.114.1|Name=mRNA_P-littoralis_Contig200.114.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1812bp|location=Sequence derived from alignment at P-littoralis_Contig200:350687..366922+ (Pylaiella littoralis U1_48)
ATGCGACCAGGCAGTCGTGGCTATGTTGGTGGAGGCTTGCAGCCTCCCGG
AACCGGGATGAGGATGGCGACAGGACAGCGCGGAGGTCGCCCAATGTCCG
GAAGGATGAGGACAGGCCAGGTCACGGCCGGTCCGAGCCGGGAAGCCGCC
TACGGAGTTGCCTTGTCGCAAGAGGTCAAAGTCACAGATCGACCGGTGAC
GCAACAGGGAATGTCGGGCATGAAAACAGCTGGCGGCGGCATCGGCATCG
GCAGGCAGGTCCAGGACGGGTCCTACTTCATCGGCGTACTCCGGAGCAAG
ATGAACGACATCCACGCCGAAGTTGGCCGGCTGCGGGTGGAGATCGAACG
GCACGAGAAGGACGTCTCGCAGCAGGGGCACCTAGAGCGCACGTACGAGA
CGATGCTGCAGGAGGTGAAGACGCTGGAAGGCACCTTGGCAGACTATAAT
CTGGCGATTGACAAGGCTAGGACCACCGCGGACCCCGGCGAGGTCACCAA
GTACCTGCACGATCTGGAAGATCAGAACAGGCGTGAGGCCCAAGGGTTGG
ACGAGATTTTCCTCGCTAAGCAGCAGAACGAAAAGGAGGCGCAGGAATTG
GAGGTGGAGATGGAGGCGGTGCACGGACGGATGGAAGAGAAGATTAACAC
CCTGGAGCCGGAGAAACTTCACGAGTACCGCGTTCTCCTCCAGCGCAACA
ACGACCTCCAGTCGGAAGTGGCCGCGAGGCAGGCAAACGCCGACCGCTTG
TCCTCGCAGATCGGCCACCTCGAGGCCAGATCGGCGGGCGACGGAGGCGC
GGCTCTGCGCGGGGAGTACCACGTGCTGGAGAAGTCGGTCGGAAGGCTGC
GGCGGGAGCGGGAAAACCTCCAGCAAGACCTCGAGATTTCCAACATGAAC
CCCAAGCAGGCTCGAGAACGCCTTCTGAGCAAGGTTAAGGCGGACCAGGA
GCGGCTCAAGCAGCTCGACGCGCGCACGGTGGAGACAACCGACATCGTGG
ATCGCATGAAGCAGCGCCTCGAGGACCTGGAGTCGGACCTCAAGGCCGAC
AAGAGGGGAGACGTGTCGCAAAACAAGGTGGAGGTGCTGCAGAAGAGGGA
CAAGGAGATGACGGAGTTCATCGAAAATTTCGACCAGACCAAGGGGGGGG
CTCTCGCCGACCAGCAAGCGTGCAGAAGCACCATCGTCGGCCTCTTGGAG
CATATCAGCACGGGCCTTGAGTCTCAGCACCACGTCCCCGACAAGGATAG
AGTAAAGGAAATGAAGGAAGAGAAAACCTTCAAGGACAGGCAGCTCAAGA
GCTCCGAGGCCACCATGCGGCGGCTGCACCAAGACAAGGAAAAACGCCTG
CAAGAGATGGAGAAAGTCAAAACCCTCGACGAAAAGATCCCGGTGGAACT
TGCAAACCTCAAAGAGAAGATGGCTCGGATGAATGGAGAGATGAGGGAGT
TCGAGGATATCGACGGCCTGCGCGACGAAGCCGCTCGAACGAAGGAACAC
TTGCTGGGGCTCAGGAAGCAGTATCGCTCGCGTGTGGAGGCGATGCGGGG
ACAGGTCCAGCAGCTAGCCGCGAGGCACGAGGCCTGTAAGAAGGAGTTGG
CTGCCAGCGAGACCGGTAAAACTCTGGAGGCCCTGGAGAGGAAGATGCGC
ACGTACGAGACGAACATCTTCTTCCTCAAGGAGTTCGTGGAGACCAAGGG
GCGGGAGATAGACTTCCAGAGCCTGAGGGGCGAGTGCATGGGCATGGTGA
AGGACCTCAACGAAGCCATAAAGAGAAAGGGGGAGACCGAAGGATTTGGC
GTCGCGTACTGA
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