prot_P-littoralis_Contig200.44.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig200.44.1
Unique Nameprot_P-littoralis_Contig200.44.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length923
Homology
BLAST of mRNA_P-littoralis_Contig200.44.1 vs. uniprot
Match: A0A6H5KUR1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUR1_9PHAE)

HSP 1 Score: 269 bits (688), Expect = 4.700e-76
Identity = 226/504 (44.84%), Postives = 274/504 (54.37%), Query Frame = 0
Query:   12 RRNSSSKGKLKELQLAFSILSKELQGLDEGGEGQVSAVIDEKKASSAA--PGMKNAVDFSQQLCSAV-----PPPAVTTKGFPPQTGGSSLTRAS---KITLTEKP-------------------------ADGLEKVKAVPRSEGREAAEAARKEADQVLNRLKADLGAGIESQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTLQQLQLRVAESTVEREKFVRVVSSFGGRSMEEIKVDSQLMERRLREAEHALADSQQLVAERANEALXXXXXXXX-------ERSARSVAEEGRRNATQELRSCLRGRAKAEQDAREAAAALKKSEAQRTSLAQRLEVLRTANKRLDKRAAAVAPSSAFARGAEVERSGD-NCTGDTGDKLATARARLKTLSTSGGRDVKGTTGDRRGYQQHGGKEWAAIERATSNVVVEKRWRNKLREAETQGEAYRSAAKAAETGMKNAVRQKAELEEVNRILAKKLADVTSGEKKSKLVRIED 472
            R  S +  KL+EL+LAF +LS+E+QGLD G EG           SSAA   G     +  + L   V     PP AV T+  P Q+       A+   K   T  P                         ADG ++V+A   +EG +AAEAA K+A Q L +L  +L     ++                                S L QLQLR  ES     K  RV++SFGGRS+EEI   SQL+E RLREAE AL DSQQL A +A E L               ER AR+ AEE RR+ TQELR CLRGRA AEQ  R A AALKKSEAQR SLAQRLEVLRTANKRLDKR AAV   S+    A     G  + T D+  +LA ARARLK LSTSG      TT   RG Q H G+E AA+ERA   VV EK+WR+KLR AE QG+ ++SAAKA+ TGMK A+RQKAELEE+NR+L K+LAD    E++  + R+ D
Sbjct:    8 RTKSENASKLQELKLAFGLLSREIQGLD-GEEGDQCLPCSPATESSAAVAEGDIRRNEAPKPLAPTVNSTHIPPSAVATEEAPQQSHSGLAAEANLPAKKAATSHPGVQERRNEAADDLNRMEADQRNKAAADGFDRVRASSHAEGSKAAEAAAKQAKQSLKQLDLELEKERRARIAAE----------------------------SALHQLQLRATESDXXXXKLERVLASFGGRSLEEITTASQLLEHRLREAETALVDSQQLTAVKAAEGLEALEQAASLAEQLETERVARAAAEEARRSVTQELRCCLRGRANAEQQTRTATAALKKSEAQRESLAQRLEVLRTANKRLDKRVAAVTLQSSVGTRARCNAGGGGDATDDSVARLAAARARLKVLSTSGAAVSSITTEKGRG-QWHAGEERAAVERAVGTVVAEKQWRDKLRNAEMQGKVFQSAAKASATGMKMALRQKAELEEMNRVLVKQLADDMPAEERELVGRMVD 481          
BLAST of mRNA_P-littoralis_Contig200.44.1 vs. uniprot
Match: D7FPG8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPG8_ECTSI)

HSP 1 Score: 225 bits (574), Expect = 8.120e-61
Identity = 173/367 (47.14%), Postives = 209/367 (56.95%), Query Frame = 0
Query:  114 VKAVPRSEGREAAEAARKEADQVLNRLKADLGAGIESQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTLQQLQLRVAESTVEREKFVRVVSSFGGRSMEEIKVDSQLMERRLREAEHALADSQQLVAERANEALXXXXXXXX-------ERSARSVAEEGRRNATQELRSCLRGRAKAEQDAREAAAALKKSEAQRTSLAQRLEVLRTANKRLDKRAAAVA-PSSAFARGAEVERSGDNCTGDTGDKLATARARLKTLSTSGGRDVKGTTGDRRGYQQHGGKEWAAIERATSNVVVEKRWRNKLREAETQGEAYRSAAKAAETGMKNAVRQKAELEEVNRILAKKLADVTSGEKKSKLVRIED 472
            V+A   +EGR+AAEAA K+A Q L +L  +L     ++                                STL QLQLR  ES +EREK  RV++SFGGRS++EI   SQL+ERRL+EAE AL +SQQL A +A E L               ER AR+ AEE RR+ TQELR CLRGRA AEQ AR A AALKKSEAQR SLAQRLEVLRTANKRLDKR AAVA  SS  AR                 +LA                           Q H G+E AA+ERA   V  EK+WR+KLR AE QGE ++SAAKA+ TGMK A++QKAELEE+NR+L K+LA     E++  + R+ D
Sbjct:   85 VRASSHAEGRKAAEAAAKQAKQSLKQLDLELDKERRARTAAE----------------------------STLHQLQLRATESDLEREKLERVLASFGGRSLQEITTASQLLERRLKEAETALVNSQQLTAAKAAEGLEALEQAASLAEQLETERVARAAAEEARRSVTQELRCCLRGRANAEQQARAATAALKKSEAQRESLAQRLEVLRTANKRLDKRVAAVALQSSVGARARSNXXXXXXXXXXXVARLAXXXXXXXXXXXXXXXXXXXXXXXXXXXQSHAGEERAAVERAVGTVAAEKQWRDKLRNAEMQGEVFQSAAKASATGMKIALKQKAELEEMNRVLVKQLAGDMPAEERELIGRMAD 423          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig200.44.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KUR1_9PHAE4.700e-7644.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FPG8_ECTSI8.120e-6147.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 427..454
NoneNo IPR availableCOILSCoilCoilcoord: 285..319
NoneNo IPR availableCOILSCoilCoilcoord: 151..178
NoneNo IPR availableCOILSCoilCoilcoord: 215..257
NoneNo IPR availableCOILSCoilCoilcoord: 123..143
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 651..681
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 667..681
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 79..110
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..19
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..101
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig200contigP-littoralis_Contig200:170513..174106 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig200.44.1mRNA_P-littoralis_Contig200.44.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig200 170513..174106 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig200.44.1 ID=prot_P-littoralis_Contig200.44.1|Name=mRNA_P-littoralis_Contig200.44.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=923bp
STGKKSDDGNSRRNSSSKGKLKELQLAFSILSKELQGLDEGGEGQVSAVI
DEKKASSAAPGMKNAVDFSQQLCSAVPPPAVTTKGFPPQTGGSSLTRASK
ITLTEKPADGLEKVKAVPRSEGREAAEAARKEADQVLNRLKADLGAGIES
QKAAEAARKEAEQALKRLKAELGTERRSRIVAESTLQQLQLRVAESTVER
EKFVRVVSSFGGRSMEEIKVDSQLMERRLREAEHALADSQQLVAERANEA
LEALEALDAERSARSVAEEGRRNATQELRSCLRGRAKAEQDAREAAAALK
KSEAQRTSLAQRLEVLRTANKRLDKRAAAVAPSSAFARGAEVERSGDNCT
GDTGDKLATARARLKTLSTSGGRDVKGTTGDRRGYQQHGGKEWAAIERAT
SNVVVEKRWRNKLREAETQGEAYRSAAKAAETGMKNAVRQKAELEEVNRI
LAKKLADVTSGEKKSKLVRIEDGKKNGGKNEIPLLFADGPGTNHQTGGGV
DAASVGSLQQAEELFVEDKDEGHHAFATQRCCPGTPSCSLDQPCELAASG
DAARPVPTTAVLDGSSDNNRRTLADQGDEHLYNTTTRGTTTIVATCRRLG
DVDGQQMAPSPRLVRPAAMSTTGLDTCMVGTRTTSPHAVNGRRCYGRRSR
PRFASVSDDATSPCCRGINPPRQQQQQQQQQQQQHGVVVETKTTEVSCCS
SSAVQFSKLLSESRKLREEVLSAVRNGPLGHEGTPLMSGGNNGGGEGVGH
DGCGEDDGGSVGRGVGGWCEEKTAATSVPIEVLLRLCDRSVRGARCHWGG
VFSESPPSEGEATPACARGNTAATKNFDVAGKTEDSSWRTRRSHESWAES
PERNVRLAGAAAADETTNAALPLPPEITSALAQQVQGAVSRGDKRGFLDI
VERCGSTARGGIARLLSIDVPE*
back to top