prot_P-littoralis_Contig20.129.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig20.129.1
Unique Nameprot_P-littoralis_Contig20.129.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length390
Homology
BLAST of mRNA_P-littoralis_Contig20.129.1 vs. uniprot
Match: D8LJM7_ECTSI (C3H1-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJM7_ECTSI)

HSP 1 Score: 656 bits (1692), Expect = 4.260e-235
Identity = 314/383 (81.98%), Postives = 344/383 (89.82%), Query Frame = 0
Query:    7 GDTITFSLCKFYAAGHCDRSASCRHRHAVQKVSEAQVSAQADGFTGAVRSLVQWKDKPDHVFSACDDGTIKMWSTTDGSTWVQVTSVQTHEWRHVGALQEVNGTLFVGYGSPYTHSPDVTVDALRVLDLGGGSAEEVVNPVTGFAHSSRINCVAVVKVGADTRIYSGDEQGRITAWARPTPGAPFAQMAQLDGHARAVTSLISTTSNGMLWSSSEDATIRIWNTATNTCEHTITKENGGHEGMVVALAIGQSAVEGNLAEYVISGSKDGTMGVFQAADGALTYKHKCGTGVSTIAAFDPTPGTSALLLVGYEDGTIAVRNFPEFALAFELHPDSIYVGHSKRVHALLPFNNPAIEDCYFLSAGEEGKMLCWKVHKLTDEAPVK 389
            GDTITFS+CKFYAAG+CDR+ASCRHRHAVQKVSEA VS ++DGF GAVRSLVQWKDKPDHVFSACDDGT+KMWSTTDGSTW QVTSVQ  EWRHVG LQEV G L+VGYG+PY H  DVTVDALRV+DL  GS +EVV+ VTGFAH+SRIN + V KVGA+ R+Y+GDE+GRITAWARP+PGAPFAQ+AQL+GHARA+TSL+ST SNGMLWSSSED TIRIWNT TN C HTITK+NGGHEG V ALAIGQSA EG LAEYVISGSKDGTMGVFQAADG LTYKHKCGTGVS IAAFDPTPGTSALLLVGYEDGTIAVRNFPEFALAFE+HP S+YVGHSK V ALLPFNNP+I+D YFLSAGE+G M+CW VHKLTD +P K
Sbjct:   61 GDTITFSVCKFYAAGNCDRAASCRHRHAVQKVSEAVVSEESDGFRGAVRSLVQWKDKPDHVFSACDDGTVKMWSTTDGSTWTQVTSVQMTEWRHVGDLQEVEGVLYVGYGTPYAHLADVTVDALRVMDLTSGSTQEVVSSVTGFAHASRINRIMVAKVGAEPRVYTGDEEGRITAWARPSPGAPFAQLAQLEGHARAITSLVSTASNGMLWSSSEDGTIRIWNTGTNACVHTITKDNGGHEGPVAALAIGQSAAEGTLAEYVISGSKDGTMGVFQAADGGLTYKHKCGTGVSAIAAFDPTPGTSALLLVGYEDGTIAVRNFPEFALAFEIHPTSLYVGHSKPVLALLPFNNPSIDDGYFLSAGEDGTMMCWNVHKLTDPSPAK 443          
BLAST of mRNA_P-littoralis_Contig20.129.1 vs. uniprot
Match: A0A835YKE1_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKE1_9STRA)

HSP 1 Score: 150 bits (380), Expect = 3.820e-38
Identity = 102/283 (36.04%), Postives = 149/283 (52.65%), Query Frame = 0
Query:  102 GALQEVNGTLFVGYGSPYTHSPDVTVDALRVLDLGGG---SAEEVVNPVTGFAHSSRINCVAVVKVGADTRI-YSGDEQGRITAWARPTPGAPFAQMAQLDGHARAVTSLISTTSNGMLWSSSEDATIRIWNTATNTCEHTITKENG-GHEGMVVALAIGQSAVEGNLAEYVISGSKDGTMGVFQAADGALTYKHKCGTGVSTIAAFDPTPGTSALLLVGYEDGTIAVRNFPEFALAFELHPDSIYVGHSKRVHALLPFNNPAIEDCYFLSAGEEGKMLCWKV 379
            GA   + G    G   P      +TV  +R+L+L GG   + E V++    +AH+  INC+A +K  A   + +SG ++G I AW     G  F     L+GH R VT L       MLWS+S+D T+R+W+TAT  C   I    G GH+G V  +A G  ++EG   EY+++GS D +                    V+ +  F  +P +  LLL+G +DG+IA+R+FP F+LAFEL    + VGH   V ALLP   P   + YF+S  E+GKM+ W++
Sbjct:  130 GAPGALRGDDAAGALQPPRAERMITVGMIRMLNLRGGEPAAVEVVISDKVPYAHTHPINCLAQLKDAAGALVLFSGGDEGLIRAWK--AQGTGFQLGGVLEGHVRGVTCLCMV--GNMLWSASKDHTVRVWDTATMACLGIIGSTGGLGHKGAVTCMA-GPLSIEGEQGEYMVTGSADKS--------------------VTALTCFKTSP-SGPLLLIGSDDGSIALRDFPGFSLAFELSAAVLNVGHRTPVRALLPLEIPG-PNLYFMSGAEDGKMMMWQM 385          
BLAST of mRNA_P-littoralis_Contig20.129.1 vs. uniprot
Match: A0A6U5LIP5_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5LIP5_9STRA)

HSP 1 Score: 103 bits (256), Expect = 1.620e-20
Identity = 97/328 (29.57%), Postives = 139/328 (42.38%), Query Frame = 0
Query:   67 VFSACDDGTIKMWSTTDGSTWVQVTSVQTHEWRHVGALQEVNGTLFVGYGSPYTHSPDVTVDALRVLDLGGGSA--------EEVVNPVTGFAHSSRINCVAVVKVGAD-TRIYSGDEQGRITAWARPTPGAPFAQMAQLDGHARAVTSLISTTSNGMLWSSSEDATIRIWNTATNTCEHTITKENGGHEGMVVALAIGQSAVEGNLAEYVISGSKDGTMGVFQAADGALTYKHKCGTGVSTIAAFDPTPGTSALLLVGYEDGTIAVRNFP------EFALAFELHPDSIYVGHSKR-VHALLPFNNPAIEDCYFLSAGEEGKMLCWK 378
            +FS C DGT ++W +            +      VGAL   N  LF G+       P V V ++   +L   ++        +  V+P   +AH   +  +  V  GA    + S  E G I  W   T    F     L GHARAV+ L    S G+LWS SED +IR+W+ +  +C   I   + GH G V +L    S     L  +V S S DGT+  +  A G +      G GV TI       G + LL+ G E G I VR+ P         L  +L  D     H+   V  +     PA     F S+G++GK++ W+
Sbjct:  133 LFSGCHDGTWRLWDSAASFR----KQFENEMGGRVGALVVSNNLLFCGFEKECPLLPGVKVGSIHAWNLQNAASPPQEFHAEDSAVHP---YAHGRIVTSLLPVPDGAGGVAVVSSSEDGLIRVWRFDTGTGKFMVFRSLMGHARAVSGLAY--SEGLLWSGSEDHSIRMWDMSKGSCGKVIAGGSEGHSGPVTSLLAWGSE---KLGAFVFSSSLDGTIKAWDPA-GKMLKMESHGDGVMTIVTTTDEAG-NPLLVCGLERGNIMVRSLPGAGDLPALTLLIKLS-DQYTCSHTNGPVRCVQAGAGPA---GIFYSSGDDGKLMVWQ 442          
BLAST of mRNA_P-littoralis_Contig20.129.1 vs. uniprot
Match: A0A7S3HF87_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HF87_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 7.240e-19
Identity = 94/383 (24.54%), Postives = 170/383 (44.39%), Query Frame = 0
Query:    4 GHGGDTITFSLCKFYA-AGHCDRSASCRHRHAVQKVSEAQVSAQADGFTGAVRSLVQWKDKPDHVFSACDDGTIKMWSTTDGSTWVQVTSVQTHEWRHVGALQ--EVNGTLFV-GYGSPYTHS-PDVTVDALRVLDLGGGSAEEVVNPVT-GFAHS-SRINCVAVVKVGADTRIYSGDEQGRITAWARPTPGAPFAQMAQLDGHARAVTSLISTTSNGMLWSSSEDATIRIWNTATNTCEHTITKENGGHEGMVVALAIGQSAVEGNLAEYVISGSKDGTMGVFQAADGALTYKHKCGTGVSTIAAFDPTPGTSALLLVGYEDGTIAVRNFPEFALAFELHPDSIYVGHSKRVHALLPFNNPAIEDCYFLSAGEEGKMLCWKV 379
            G G +  T+++C F A  G C R ++CR+ H +  V+    + +         +L+   D P  + S   D  +K+ +            + T      GA++  EV+GT  +     P +   PD TV  + +L+    S   +       + H    I    +  +   T + +   +G I  W        F Q+  L+GH RAVT+++   +  +LWS S D+T+R+W+ A+  C  T+   NGG  G   A+   +         ++ SG+ D  + ++    G+L +    G  V+++ AF  T G   +LL+G  DGTI VR+     + F L      + H+K + +++       + C F +  ++G+++ WKV
Sbjct:   59 GTGQEPATYNICSFDARGGSCSRGSACRYTHNLATVAFTIPANKEQPQPIKSLALLTMPDGP-KLLSGSTDSIVKVHNLASEKPGEDSVPIPT-----TGAVEHIEVSGTTIMWSVDEPISPDMPDNTVGMVYLLNSADMSTIAIKRSEDFPYTHPFGEIRSFTIAVIDGVTFVITAGGEGLIRTWRFDASKGGFEQIMVLEGHIRAVTTVL--LNGALLWSGSVDSTLRVWDLASGKCLATLAAANGG-PGHTQAVTCLEFVPNTGAEPFIASGAADNAVKLW-GTTGSLLHTVTHGAMVTSLKAFKDTLGGIQVLLIGLLDGTIHVRSCMSMKILFTLDAS---ICHTKAIWSIVDLG----QSC-FGAGSDDGQIVVWKV 423          
BLAST of mRNA_P-littoralis_Contig20.129.1 vs. uniprot
Match: A0A7R9WQC1_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WQC1_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 8.140e-12
Identity = 78/254 (30.71%), Postives = 112/254 (44.09%), Query Frame = 0
Query:  146 PVTGFAHSSRINCVAVVKVGADTRIYSGDEQGRITAW---ARPTPG-APFAQMAQLDGHARAVTSLISTTSNGMLWSSSEDATIRIWNTATNTCEHTIT------KENG--------GHEGMVVALAIGQSAVEGNLAEYVISGSKDGTMGVFQAADGALTYKHKCGTGVSTIA-AFDPTPGTSALLLVGYEDGTIAVRNF------PEFALAFELHPDSIYVGHSKRVHALLPFNNPAIEDCYFLSAGEEGKM 374
            P+  ++H++R++ + V+      ++ SG   G I  W   A    G   F     L GHAR VT L    +  +LWSSS D +IRIW+ A+  C+H IT      +++G        GH+  V  L    S        ++++ S DG +  +  + G        G GV TIA A D     + +LL+G E G I VRN       P F L   L      VGH   V AL     P+     F S G +GK+
Sbjct:   16 PMIAYSHATRVSALNVI---GGQKVISGSRDGCIRLWTFEASSNQGKGGFVLSKTLAGHAREVTGLA--VAENVLWSSSIDGSIRIWDLASGNCQHAITNSGTNAQQSGQPPAGGGQGHKDAVTCLIPFPSPS----GTFILTSSLDGDIKAWNGSTGQCVASESHGEGVVTIAMAADQK--NNQVLLIGLESGNIMVRNLLQTPNMPAFTLIMMLSLQ-YSVGHRGPVKALA--QGPSST---FYSGGGDGKV 252          
BLAST of mRNA_P-littoralis_Contig20.129.1 vs. uniprot
Match: A0A6U3AW41_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A6U3AW41_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 2.890e-11
Identity = 112/468 (23.93%), Postives = 170/468 (36.32%), Query Frame = 0
Query:    4 GHGGDTITFSLCKFYAA-GHCDRSASCRHRHAV--QKVSEAQVSAQADGFT-------------------GAVRSLVQWK-DKPDHVFSACDDGTIKMWSTTDGSTWVQVTSVQTHEWRHVGALQEV-NGTLFVGYGSPYTHSPDVTVDALRVLDL---GGGSAEEVVNPV-TGFAHSSRINCVAV-----------------VKVGADTRIYSGDEQGRITAWARPTPGAPFAQMAQLDGHARAVTSLISTTSNGMLWSSSEDATIRIWN----TATNTCEHTITKENGG-------------------------HEGMVVALAIGQSAVEGNLAEYVISGSKDGTMGVFQAADGALTYKHKCGTGVSTIAAF-------------DPTPGTSALLLVGYEDGTIAVR------NFPEFALAFELHPDSIYVGHSKRVHALLPFNNPAIEDCYFLSAGEEGKMLCWK 378
            G G +T+ F+ CK Y   G+C    +C+  H V   KV EA    Q +                       AV ++  W+ +    +F+   DG  +MW+T+ G +    T+++      V  LQ   N  L+ G+ +  T  PDV V  +   +L   G    E  V+P    ++HS  +  +AV                       + + +G + G I  W     G  F+ +  L GH R +T L+      +LWS          +         C++ IT++  G                         H   V AL    S        +V+S S DGT+  + +  G          GV TIA               DP  G   +LL+G E G IA R      N P FAL F L        HS  V A+ P   P+     F + G +G ++ W+
Sbjct:   60 GQGPNTL-FNPCKAYTTTGNCQHGNNCKFAHIVTLHKVMEASSPIQNNNNXXXXXXXXXXXXXXXXXXRKAAVSAVSIWEMNGTIQIFTGSQDGFWRMWNTSQGFSKQAETNMK----GKVECLQVFQNSFLYCGFEAVSTLLPDVPVGMVNAWNLQNPGPQPMELQVDPQHLPYSHSQSVTAIAVGGXXXXXXXXXXXXXXXXXXXGPSVVVTGSKDGSIRLWTMQG-GTTFSLVRTLPGHTRQITGLLLIPGGSLLWSXXXXXXXXXXDLNQSVPEKACQYCITRDTPGAVPNSTTGGANPQNANNNTQGSGVGHSAAVTALVPFTSPA----GTFVLSSSLDGTIKAWDSNTGQCVANETHTEGVVTIALAQAAPAQQGQPAPNDPNGGAPQVLLIGLESGNIACRSLVQTQNTPAFALLFILS-GKYTAAHSGAVKAIAP--GPSAT---FYTGGNDGNLMVWQ 511          
BLAST of mRNA_P-littoralis_Contig20.129.1 vs. uniprot
Match: A0A2R6QS96_ACTCC (Zinc finger CCCH domain-containing protein isoform 2 n=2 Tax=Actinidia chinensis var. chinensis TaxID=1590841 RepID=A0A2R6QS96_ACTCC)

HSP 1 Score: 60.8 bits (146), Expect = 1.810e-6
Identity = 76/328 (23.17%), Postives = 129/328 (39.33%), Query Frame = 0
Query:   13 SLCKFYAAGHCDRSASCRHRHAVQKVSEAQVSAQADGFTGAVRSLVQWKDKPDHVFSACDDGTIKMWSTTDGSTWVQVTSVQTHEWRHVGALQEVNGTLFVG-YGSPYTHSPDVTVDALRVLDLGGGSAEEVVNPVTG-----FAHSSRINCVAVVKVGADTRIYSGDEQGRITAWARPTPGAPFAQMAQLDGHARAVTSLISTTSNGMLWSSSEDATIRIWNTATNTCEHTITKENGGHEGMVVALAIGQSAVEGNLAEYVISGSKDGTMGVFQAADGA---LTYKHKCGTGVSTIAAFDPTPGTSALLLVGYEDGTIAVRNFPEFA 331
            ++C++  +G C R   C   H+    +     A+ DG   AV  +  +    + +F+ C D T+++W  T G                    Q V G    G  GS   H P V V     +       +E +N +TG     +A +S        K G    +++G + G I AW   +       +A + GH+  V SL+    N  L+S           + T  C HT+     GH  +V+++ +          ++++S S DGT+ V+   +G    + Y HK G GV  +           +LL    D ++ + + P FA
Sbjct:  105 TVCQYLLSGDCPRGEKCEDLHSWFCGNGLSRVARLDGHNKAVTGIA-FPSGSNKLFTGCKDKTVRVWDGTTG--------------------QCVRGFNMSGEVGSLIYHDPWVFVGLTNAVKAWNIQTQEELN-LTGPVGQVYAMTS--------KKGV---LFAGTQDGTILAWKSNSQTNCRELVASMKGHSGGVVSLVGDAKN-RLYSXXXXXXXXXXESDTFECIHTL----NGHTDVVMSVGL--------WGDFLLSCSLDGTIKVWAPTEGGGIEVCYTHKEGHGVLALCGICDAEA-KPILLCSCNDNSVRLYDLPSFA 385          
BLAST of mRNA_P-littoralis_Contig20.129.1 vs. uniprot
Match: UPI000B76F7ED (zinc finger CCCH domain-containing protein 48-like n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=UPI000B76F7ED)

HSP 1 Score: 60.1 bits (144), Expect = 2.530e-6
Identity = 60/241 (24.90%), Postives = 101/241 (41.91%), Query Frame = 0
Query:   14 LCKFYAAGHCDRSASCRHRHA-VQKVSEAQVSAQADGFTGAVRSLVQWKDKPDHVFSACDDGTIKMWSTTDGSTWVQVTSVQTHEWRHVGALQEVNGTLFVGYGSPYTHSPDVTVDALRVLDLGGGSAEEVVNPVTGFAHSSRINCVAVVKVGADTRIYSGDEQGRITAWARPTPGAPFAQMAQLDGHARAVTSLISTTSNGMLWSSSEDATIRIWNTATNTCEHTITKENGGHEGMVVAL 253
            +CKF+  G C    +C+  H+  Q  +   + A+ +G   +V   V      D +++   DGT+++W    G               HV  L    G+L       +   P++    +RV +L     +E       F     I  V  + V  D  +++G   G I  W       PFA++A L GH +AV  L   +    L+S S D T+ +W+  T  C+ T+     GH+ +V++L
Sbjct:   39 ICKFWVKGKCAYKNNCKFLHSWFQSGNGFSMLARLEGHKKSVVG-VALPSGSDKLYTGSRDGTVRVWDGNSGKC------------DHVFNLGFEIGSLICEGSWVFIGLPNL----VRVWNLSSEGNKE-------FCLDGPIGQVYALAVYKDL-LFAGTANGDILVWRGSFEANPFAKVATLRGHQKAVVCLNIGSGVNSLYSGSMDNTVTVWDLETLQCKQTL----NGHKDVVMSL 250          
BLAST of mRNA_P-littoralis_Contig20.129.1 vs. uniprot
Match: A0A7S0CBB5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CBB5_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 3.760e-6
Identity = 51/166 (30.72%), Postives = 75/166 (45.18%), Query Frame = 0
Query:  150 FAHSSRINCVAVVKVGADTRIYSGDEQGRITAW-------ARPTPGA--------PFAQMAQLDGHARAVTSLISTTSNGMLWSSSEDATIRIWNTATNTCEHTIT------------------KENGGHEGMVVALAIGQSAVEGNLAEYVISGSKDGTMGVFQA 282
            +AH+  ++ + V K   D  + SG + G I  W       A  TPGA         F  +  L GHAR +T L+   +  M+WSSS D TIR+W+  T  C+H IT                  +   GH   V +L + +S  EG   E+++S S DG +  + A
Sbjct:    1 YAHAMGVSSLLVTK---DMVVVSGSKDGTIRIWKFTTTNPAVATPGAVAPASPASEFLLLNTLFGHAREITGLV-LINMSMIWSSSTDYTIRLWDANTGQCQHLITSAEEKTPPPGGNMLAPADRAKKGHTHAVTSLLVWKS--EGG--EFILSSSLDGKVMAWSA 158          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig20.129.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D8LJM7_ECTSI4.260e-23581.98C3H1-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A835YKE1_9STRA3.820e-3836.04WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A6U5LIP5_9STRA1.620e-2029.57Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S3HF87_9STRA7.240e-1924.54Hypothetical protein n=2 Tax=Spumella elongata Tax... [more]
A0A7R9WQC1_9STRA8.140e-1230.71Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A6U3AW41_9STRA2.890e-1123.93Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A2R6QS96_ACTCC1.810e-623.17Zinc finger CCCH domain-containing protein isoform... [more]
UPI000B76F7ED2.530e-624.90zinc finger CCCH domain-containing protein 48-like... [more]
A0A7S0CBB5_9STRA3.760e-630.72Hypothetical protein (Fragment) n=1 Tax=Proboscia ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 140..183
e-value: 10.0
score: 10.7
coord: 232..281
e-value: 0.73
score: 17.9
coord: 284..326
e-value: 180.0
score: 2.7
coord: 190..229
e-value: 5.8E-4
score: 29.2
coord: 40..80
e-value: 0.0074
score: 25.5
coord: 335..378
e-value: 230.0
score: 2.1
IPR001680WD40 repeatPFAMPF00400WD40coord: 54..80
e-value: 0.15
score: 13.0
coord: 195..229
e-value: 0.03
score: 15.2
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 197..238
score: 13.181907
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 195..387
e-value: 4.0E-20
score: 74.1
coord: 5..194
e-value: 5.8E-9
score: 37.4
NoneNo IPR availablePANTHERPTHR44129FAMILY NOT NAMEDcoord: 54..281
NoneNo IPR availablePANTHERPTHR44129:SF1LISSENCEPHALY-1 HOMOLOG Acoord: 54..281
NoneNo IPR availablePANTHERPTHR44129:SF1LISSENCEPHALY-1 HOMOLOG Acoord: 174..380
NoneNo IPR availablePANTHERPTHR44129FAMILY NOT NAMEDcoord: 174..380
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 197..229
score: 10.179234
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 14..36
score: 11.366071
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 48..380

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig20contigP-littoralis_Contig20:517397..527436 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig20.129.1mRNA_P-littoralis_Contig20.129.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig20 517283..527455 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig20.129.1 ID=prot_P-littoralis_Contig20.129.1|Name=mRNA_P-littoralis_Contig20.129.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=390bp
MGRGHGGDTITFSLCKFYAAGHCDRSASCRHRHAVQKVSEAQVSAQADGF
TGAVRSLVQWKDKPDHVFSACDDGTIKMWSTTDGSTWVQVTSVQTHEWRH
VGALQEVNGTLFVGYGSPYTHSPDVTVDALRVLDLGGGSAEEVVNPVTGF
AHSSRINCVAVVKVGADTRIYSGDEQGRITAWARPTPGAPFAQMAQLDGH
ARAVTSLISTTSNGMLWSSSEDATIRIWNTATNTCEHTITKENGGHEGMV
VALAIGQSAVEGNLAEYVISGSKDGTMGVFQAADGALTYKHKCGTGVSTI
AAFDPTPGTSALLLVGYEDGTIAVRNFPEFALAFELHPDSIYVGHSKRVH
ALLPFNNPAIEDCYFLSAGEEGKMLCWKVHKLTDEAPVK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR000571Znf_CCCH
IPR036322WD40_repeat_dom_sf