prot_P-littoralis_Contig20.117.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig20.117.1
Unique Nameprot_P-littoralis_Contig20.117.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length593
Homology
BLAST of mRNA_P-littoralis_Contig20.117.1 vs. uniprot
Match: D8LJN3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJN3_ECTSI)

HSP 1 Score: 182 bits (463), Expect = 1.820e-48
Identity = 160/490 (32.65%), Postives = 201/490 (41.02%), Query Frame = 0
Query:  127 MYNNYHADLDPALAKLRDSLHQCSIDRTGWATVTAMSAVLELAGVSLNDSTILLLANR--LDDPRDPTGPMQEHFQRDATAAVSKTR--LVHWPTIVDFLEEYPFADAKNGATMPVCKSESLVSKTFPSRSFQSARKPQTDGEPAVPMKTDKAVSPSAAEDAQQGGHNPEVTPESNVGESGGKLETDGGHSRRSINDLSCGGIMRIKQGLREIEAGLRDMAFD-GARPSLAGRGGVMDSIREVLKAKAGVLFGRGSTGPAGDRKGSNNKRSGRRTPSGAPSDCSVAHKKSSEAQNALERLTSAACTAGKIGDVSALDGLADSVDLRTKNAFGRNPLYYACLCGHVRAAHFVVGRAYGSVEGIPEKERWECRKNALSEEMRRYLDTGTLP--TERLDDTNKIPKSDEGRPAVQAVLAVPPDREEQRCRGTANT----------AVRSNGRGCLVETGD-------GSAPEAVISVASLFGWGHDQENNQDY 592
            +YN  H D   +L  L+DS  QCSID TGWATVT++SAV++ AG++ +++ +LLLAN   + +  + TG   E  Q D +AA S  R  LV+WP I+DF+E+ P                              AR                                                    G   R  ND+ C    R           +    FD GA+ S         +  E L                              +PSGA                            G++ D    +G+ADSVDLR  + FGRN LYYACLCGH  AAHFVV RAYG VEGIP+KER ECR NALSEE+RRYLDTG     T R  +     K DEGRPA     AVPPDRE+    G              +  SNGR                S+ E  +SVASLFGWGHD++ + DY
Sbjct:   45 VYNRCHGDFSSSLENLKDSFQQCSIDGTGWATVTSISAVMKKAGITTDEAAVLLLANEPGIRNNHNNTGYAHEQRQ-DNSAAKSAPRAPLVYWPNIIDFVEQGP------------------------------AR----------------------------------------------------GFGYRG-NDVQCTEKWRTSTSSTNNIPPVAKHRFDSGAKKS---------TTPEDLNV----------------------------SPSGA----------------------------GQLKDDENPEGIADSVDLRRNDDFGRNALYYACLCGHAHAAHFVVVRAYGDVEGIPQKERRECRMNALSEEIRRYLDTGISSGATPRTQEA----KQDEGRPAQ----AVPPDREKYHHSGAERIKPDGAREHVGSAGSNGRAVDARESSLSLAHNAASSAEGALSVASLFGWGHDRQKDADY 377          
BLAST of mRNA_P-littoralis_Contig20.117.1 vs. uniprot
Match: A0A6H5JWB7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWB7_9PHAE)

HSP 1 Score: 155 bits (393), Expect = 2.690e-38
Identity = 150/467 (32.12%), Postives = 215/467 (46.04%), Query Frame = 0
Query:  166 LELAGVSLNDSTILLLANRLDDPRDPTGPMQEHFQRDATAAVSKTR--LVHWPTIVDFLEEYPFADAKNGATMPVCKSESLVSKTFPSRSFQSARKPQTDGEPAVPMKT-DKAVSPSAAEDAQQGGHNPEVTPESNVGESGGKLETDGG-------HSRRSINDLSCGGIMRIKQGLREIEAGLRDMAFDGARPSLAGRGGVMDSIREVLKAKAGVLFGRGSTGPAGDRKGSNNKRSGRRTPSGAPS--------DCSVAHKKSSE-AQNALERLTSAACTAGKIGDVSALDGLADSVDLRTKNAFGRNPLYYACLCGHVRAAHFVVGRAYGSVEGIPEKERWECRKNALSEEMRRYLDTGTLP--TERLDDTNKIPKSDEGRPAVQAVLAVPPDREEQRCRGTANT----------AVRSNGRGCLVETGDG---------SAPEAVISVASLFGWGHDQENNQDY 592
            ++ AG++++++ ++LLA +     + +     + ++D TAAVS  R  LV+WP I+DF+E+ P            C +E L + T    +  SA + +   E    + + D  VSP  A   +    NPEVTPES +    G L + GG       +S    ND SC   +R++QGL +I +GLR++   GA+ S       MDSIRE+L+A+ G+  G   + P G+ +    +R       GA           C VA  +++       + L S AC AGK GD+SAL                                           +GIP+KER EC  NALSEE+R YLDTG  P  T R  +     K DEGRP    V AVPPDRE+    G              +V  NGR  +V+  +          S+ E  +SVASLFGWGHD+E + DY
Sbjct:    1 MKKAGITVDEAAVILLATQPGTLNNHSTGRARNQRQDDTAAVSAPRAPLVYWPNIIDFVEQGPAPGFGYRGNDVQC-TEKLRTSTPSMNNIPSAARHRFGSEAKKSITSEDLNVSPLGAGQTKVD-ENPEVTPESRLERRDG-LSSHGGDSSVRHKNSEGDANDSSC---VRLRQGLHDISSGLREVTVQGAKLSPRQIKHAMDSIREILEAQTGMNCGEVPSTPGGESRIPLGERGPHVREEGAGEVQSKATWHGCCVAEARATSLGPRGTKSLVSTACAAGKRGDISAL-------------------------------------------KGIPQKERRECSMNALSEEIRHYLDTGISPGATPRTQEA----KQDEGRP----VQAVPPDREKNHHSGAEKMKPAGAGGDVGSVGDNGR--VVDARESPLGGAHNAASSAEGALSVASLFGWGHDREKDADY 408          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig20.117.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LJN3_ECTSI1.820e-4832.65Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JWB7_9PHAE2.690e-3832.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 486..506
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 48..120
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 94..120
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 71..91
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 375..402
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 251..317

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig20contigP-littoralis_Contig20:481859..486623 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig20.117.1mRNA_P-littoralis_Contig20.117.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig20 481859..486623 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig20.117.1 ID=prot_P-littoralis_Contig20.117.1|Name=mRNA_P-littoralis_Contig20.117.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=593bp
MGGTASVVQHGVSGSRNKTDETTLLKLYNRNRRDDTGLSEHQMLMACVED
SKIKPPSTIPGQDIKQHLRGHAAKTSTTPRGSGTQSCPPKTATACGDEKR
RHEPDKLQRDKRRAERTRARDKAVIQMYNNYHADLDPALAKLRDSLHQCS
IDRTGWATVTAMSAVLELAGVSLNDSTILLLANRLDDPRDPTGPMQEHFQ
RDATAAVSKTRLVHWPTIVDFLEEYPFADAKNGATMPVCKSESLVSKTFP
SRSFQSARKPQTDGEPAVPMKTDKAVSPSAAEDAQQGGHNPEVTPESNVG
ESGGKLETDGGHSRRSINDLSCGGIMRIKQGLREIEAGLRDMAFDGARPS
LAGRGGVMDSIREVLKAKAGVLFGRGSTGPAGDRKGSNNKRSGRRTPSGA
PSDCSVAHKKSSEAQNALERLTSAACTAGKIGDVSALDGLADSVDLRTKN
AFGRNPLYYACLCGHVRAAHFVVGRAYGSVEGIPEKERWECRKNALSEEM
RRYLDTGTLPTERLDDTNKIPKSDEGRPAVQAVLAVPPDREEQRCRGTAN
TAVRSNGRGCLVETGDGSAPEAVISVASLFGWGHDQENNQDY*
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