mRNA_P-littoralis_Contig198.1.1 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig198.1.1 vs. uniprot
Match: D8LIE1_ECTSI (Rhodanese Homology Domain superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIE1_ECTSI) HSP 1 Score: 1056 bits (2732), Expect = 0.000e+0 Identity = 592/855 (69.24%), Postives = 656/855 (76.73%), Query Frame = 1
Query: 58 VTSMKSELQCCRRDNGERRRHGRR-PELHRLAAGGNSSPAHEVLSNDNVRVRRNLERIRQVEEGDTKTVRVITSSALRGKLRLSGRHKRGRVFLPTDPPGGSLETLHRLLKETFPLGDFPVALYVKTSLDEGAERSMLESDERLLAAVSWAEGQGLGLNVFVDVVSTAGVAPDYEEERAPECCWTSPTPKRLTSGRC*ASTAS-STSTSQSFANMLQLAWAPLGVRGRVYVASEGSTRRWPCLAPATGRFERAVEAVGSWRACKYLNRAERRWSGEEFRQDPPFSALHVRARKQIVADGLSQPLEWSDRSGKVGKGLSPEEWHEMMDSEEGATILDCRNSYESVVGTFDDALPLDTSFFRESWGELERLVGDSDRDAPIMTYCTGGIRCVKIAAYLEQEMGFTNVTRLEGGVVSYSKFAKERGLKSKFKGMNYVFDKRMGDKVTGDMLSKCHQCGQPCADHTNCANSCCHARLIQCQSCASEYNACCSRGCHEQQHSREALRASLMRREREAMGLPALPT-------TATSAVGATSVAA--VAVAVAGNGDRNEAGISFEETLAGGEVDKLLWLVWPFQDPTLNLLFDRAFDEFRDSPPPRLQREDGDGARDAAEENCSRMIGVVSRLGGGKRALAVGLGSGGPAGRAGLQRLAEALGEGGELVVVEASQEAASAGRGLSLVSRARGCSVQVMVCDDGAIVENVETAAVKT----VGTAPLAVDGGEEGEEASGGPAPRSSAGKDLFDVILLGGGVGTEAAELVTVGDGDGEGASIPERGRTPAGRLDLVLDRRLIKRTGLVLCDPCALVGGELAARSMVARAAQLRGTVEHARVPGAGPSGGLHVFKWKTYSH 2577
+S+K EL+CC R+ G RRR RR PEL RL AGG +SP EVL NDN RVRRNLERIRQVE DTKT+R ITSSALRGKLRLSGR KRGRVFLP DP GGSLETL R+LKETFPLGDFPVALYVKTSL E A+RSML SDE LL AV+WAEGQGL LNVF+DV PDYEEE APE P P + ++FANMLQLAWAPLGVRGRVYVA+EG + +T RFERAVEAV A YLN+AERRWSG+EFR+ PPF ALHVRARKQIVADGL++PLEWSDRSGKVGK LSPEEWH+MMD EEGAT+LDCRNSYESVVGTFD ALPLDTSFFRESWGELERLVGD+DRDAPIMTYCTGGIRCVKIAAYLEQEMGFTNVTRL GG++SY+ FAKERGL+SKFKG+NYVFDKRMGDKVTGDMLSKCHQCG PCADHTNCANSCCHARLIQC+SCAS+Y CCSRGC +Q+ SRE LRASLMR EREAMGLP LPT T T+A GA V G+ EA ETL + +LLWLVWPFQDPTLNL+FDRAFDE+RDS P +DG E++ SRMIG+VSRLGGGKRALAVGLGSGG AGRAGL+RLAEALGEGGEL VVEAS EAASA RGLSLV++ RGCSV V+VCD+G ++++V T A G++G+ G A RS+ G LFDVILLGGG G E A V V + D RTP+ RLDLV+DRRL+KRTGLVLCDP AL GG AARSMVARAA+++G+VEHARVPGAGPSGGLHVFKWKTYSH
Sbjct: 48 ASSIKDELRCCGREKGTRRRRSRRSPELSRLGAGGGNSPPLEVLRNDNARVRRNLERIRQVERDDTKTIRAITSSALRGKLRLSGRDKRGRVFLPRDPAGGSLETLRRMLKETFPLGDFPVALYVKTSLGEDAQRSMLTSDEGLLGAVAWAEGQGLDLNVFLDV------HPDYEEEEAPEWLVDVPDPDSAPEWEMLSFYRFVDIDQPEAFANMLQLAWAPLGVRGRVYVATEGVNAQMAVPCTSTERFERAVEAVEKL-AGVYLNKAERRWSGDEFRESPPFPALHVRARKQIVADGLARPLEWSDRSGKVGKELSPEEWHQMMDKEEGATLLDCRNSYESVVGTFDKALPLDTSFFRESWGELERLVGDADRDAPIMTYCTGGIRCVKIAAYLEQEMGFTNVTRLGGGIISYANFAKERGLESKFKGVNYVFDKRMGDKVTGDMLSKCHQCGVPCADHTNCANSCCHARLIQCESCASKYKGCCSRGCDDQR-SREDLRASLMRSEREAMGLPPLPTPPLPLDSTPTAAGGAGEAVDDDAQGGVPGSAGLEEATAIRTETLE--DEGELLWLVWPFQDPTLNLMFDRAFDEYRDSAPTG---DDGS----TVEQDSSRMIGIVSRLGGGKRALAVGLGSGGAAGRAGLRRLAEALGEGGELFVVEASYEAASAARGLSLVAQGRGCSVTVLVCDEGEMLQSVTKVVAGADSPKASTEAAAAAVGKDGDVRPDGAAHRSARG-GLFDVILLGGGDGVEGAGSVPVREED----------RTPSERLDLVMDRRLMKRTGLVLCDPQALGGGRAAARSMVARAAEVKGSVEHARVPGAGPSGGLHVFKWKTYSH 874
BLAST of mRNA_P-littoralis_Contig198.1.1 vs. uniprot
Match: A0A6H5L4H6_9PHAE (Rhodanese domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4H6_9PHAE) HSP 1 Score: 964 bits (2493), Expect = 0.000e+0 Identity = 556/891 (62.40%), Postives = 622/891 (69.81%), Query Frame = 1
Query: 64 SMKSELQCCRRDNGERRRHG-RRPELHRLAAGGNSSPAHEV------------------------------------------LSNDNVRVRRNLERIRQVEEGDTKTVRVITSSALRGKLRLSGRHKRGRVFLPTDPPGGSLETLHRLLKETFPLGDFPVALYVKTSLDEGAERSMLESDERLLAAVSWAEGQGLGLNVFVDVVSTAGVAPDYEEERAPECCWTSPTPKRLTSGRC*ASTAS-STSTSQSFANMLQLAWAPLGVRGRVYVASEGSTRRWPCLAPATGRFERAVEAVGSWRACKYLNRAERRWSGEEFRQDPPFSALHVRARKQIVADGLSQPLEWSDRSGKVGKGLSPEEWHEMMDSEEGATILDCRNSYESVVGTFDDALPLDTSFFRESWGELERLVGDSDRDAPIMTYCTGGIRCVKIAAYLEQEMGFTNVTRLEGGVVSYSKFAKERGLKSKFKGMNYVFDKRMGDKVTGDMLSKCHQCGQPCADHTNCANSCCHARLIQCQSCASEYNACCSRGCHEQQHSREALRASLMRREREAMGLPALPTTATSAVGATSVAAVAVAVAGNGDRNEAGIS----FEE-----TLAGGEVDKLLWLVWPFQDPTLNLLFDRAFDEFRDSPPPRLQREDGDGARDAAEENCSRMIGVVSRLGGGKRALAVGLGSGGPAGRAGLQRLAEALGEGGELVVVEASQEAASAGRGLSLVSRARGCSVQVMVCDDGAIVENVETAAVKTVGTAPLAVDGGEEGEEASGGPAPRSSAGKDLFDVILLGGGVGTEAAELVTVGDGDGEGASIPERGRTPAGRLDLVLDRRLIKRTGLVLCDPCALVGGELAARSMVARAAQLRGTVEHARVPGAGPSGGLHVFKWKTYSH 2577
S+K EL CC + G RRR R PEL RL AGG +SP EV L NDN RVRRNLERI QVE DTKT+R ITSSALRGKLRLSGR KRGRVFLP DP GGSLETL R+LKETFPLGDFPVALYVKTSL E A+RSML SDE LL AV+WAEGQGL LNVF+DV PDYEEE APE P P + ++FANMLQLAWAPLGVRGRVYVA+EG + +T RFERAVEAV A YLN+AERRWSG EFR+ PPF ALHVRAR+QIVADGL++PLEWSDRSGK+GK LSPEEWHEMMD EEGAT+LDCRNSYESVVGTFD ALPLDTSFFRESWGELERLVGD+DRDAPIMTYCTGGIRCVKIAAYLEQEMGFTNVTRL+GG++SY+KFAKERGL+SKFKG+NYVFDKRMGDKVTGD LSKCHQCG PCADHTNCANSCCHARLIQC+SCAS+Y CCSRGC +Q+ SRE LRASLMR EREAMGLP+LPT++ + + VA A+ G D + +S EE T A + ++LLWLVWPFQDPTLNL+FDRAFDE+RDS P +DG A E++ SRMIG++SRLGGGKRALAVGLGSG AGRAGL+RLAEALGEGGEL VEAS EAA+A RGLSLV++ARGCSV V+VCD+G ++E++ T E + A E T R P RL+KRTGLVLCDP AL GG AARSMVARAA+++G+VEHARVPGAGPSGGLHVFKWKTYSH
Sbjct: 52 SIKDELWCCSWEKGTRRRRSCRSPELSRLGAGGGNSPPLEVVVDSEHLQHCRSRDVEGEAPDDLPDRARLRVRTRSVPTNWQVLRNDNARVRRNLERIHQVERDDTKTIRAITSSALRGKLRLSGRDKRGRVFLPRDPAGGSLETLRRMLKETFPLGDFPVALYVKTSLGEDAQRSMLTSDEGLLGAVAWAEGQGLDLNVFLDV------HPDYEEEEAPEWLVDVPDPDSAPEWEMLSFYRFVDIDQPEAFANMLQLAWAPLGVRGRVYVATEGVNAQMAVPCTSTERFERAVEAVEKL-AGVYLNKAERRWSGNEFRESPPFPALHVRARRQIVADGLARPLEWSDRSGKIGKELSPEEWHEMMDKEEGATLLDCRNSYESVVGTFDKALPLDTSFFRESWGELERLVGDADRDAPIMTYCTGGIRCVKIAAYLEQEMGFTNVTRLQGGIISYAKFAKERGLESKFKGVNYVFDKRMGDKVTGDKLSKCHQCGVPCADHTNCANSCCHARLIQCESCASKYKGCCSRGCDDQR-SREDLRASLMRSEREAMGLPSLPTSSLPVD--SPLKPVAEAIEGVVDDVQGDVSKSAGLEEAAAIRTEAQEDEEELLWLVWPFQDPTLNLMFDRAFDEYRDSAPTG---DDGS----AVEQDSSRMIGIISRLGGGKRALAVGLGSGSAAGRAGLRRLAEALGEGGELFAVEASSEAATAARGLSLVAQARGCSVTVLVCDEGEMLESIRTVVA--------------EADSAKXXXXXXXXXXXXXXXXXXF-------RLERRTA--------------RQPKDWTLSWTGERLMKRTGLVLCDPQALGGGRAAARSMVARAAEVKGSVEHARVPGAGPSGGLHVFKWKTYSH 890
BLAST of mRNA_P-littoralis_Contig198.1.1 vs. uniprot
Match: A0A835YRN1_9STRA (Rhodanese domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRN1_9STRA) HSP 1 Score: 360 bits (924), Expect = 4.920e-107 Identity = 245/633 (38.70%), Postives = 324/633 (51.18%), Query Frame = 1
Query: 211 RNLERIRQVEEGDTKTVRVITSSALRGKLRLSGRHKRGRVFLPTDPPGGSLETLHRLLKETFPLGDFPVALYVKTSLDEGA----------ERSMLESDERLLAAVSWAEGQGLGLNVFVDVVSTAGVAPDYEEERAPECCW-------TSPTPKRLTSGRC*ASTASSTSTSQSFANMLQLAWAPLGVRGRVYVASEGSTRRWPCLAPATGRFERAVEAVGSWRACKYLNRAERRWSG--EEFRQDPPFSALHVRARKQIVADGLSQPLEWSDRSGKVGKGLSPEEWHEMM---DSEEGATILDCRNSYESVVGTFDDALPLDTSFFRESWGELERLVGDSDRDAPIMTYCTGGIRCVKIAAYLEQEMGFTNVTRLEGGVVSYSKFAKERGLKSKFKGMNYVFDKRMGDKVTGDMLSKCHQCGQPCADHTNCANSCCHARLIQCQSCASEYNACCSRGCHEQQHSREALRASLMRREREAMGLPALPTTATSAVGATSVAAVAVAVAGNGDRNEAGISF--EETLAGGEVDKLLWLVW----PFQDPTLNLLFDRAFDEFRDSPPPRLQREDGDGARDAAEENCSRMIGVVSRLGGGKRALAVGLGSGGPAGRAGLQRLAEALGEGGELVVV 2025
RNL ++ + +RV S LR +LRLSG KR R+FLP D E + ++E FP+GD PV L+ + E +R + +L A+ +WA+ GL LNV++++ P Y + P W ++P ++ S +FA +L W PLG RGRVYVA EG + RFE A +V A YLN+ R S E+ + PF ALHVR R QIVADGL+ PL+W R +G LSP EWH + + G +LDCRN YE+ VG F+ A PL T+FFR+SW L + D DAPI+TYCTGGIRCVK+AAYLEQE+G+TNV RLEGG+VSY+++A+ G+ S+F+G NYVFD RM +++T D+L+ CHQCG PC D NCAN CH R IQC CA Y +CCS GC QQ + EA ASL R V A+A A GD +EA + L W PFQ LNLLFDR + RD D+ ++ +G V+RLGG K AL V + G + + +Q + EAL G V +
Sbjct: 9 RNLAVFEALKNSELSPIRVFASPELRSRLRLSGNEKRQRIFLPRDTRQDP-EVIMAAVREAFPVGDLPVELWAYAAPSEQQPTPDVRTELPKRVPVTDTNQLAASFAWADAAGLDLNVYLEL------DPAYRDPDPP--AWLVNLPDVSAPREWQMISFYRFVDVPDPA----AFAALLTALWRPLGARGRVYVAREGVNAQMAVPVDVVERFEVATASVARL-AGVYLNKDSVRRSADVEDGDEAMPFDALHVRVRDQIVADGLATPLDWRTR---IGAALSPAEWHARVAGPGAAPGTVVLDCRNDYETDVGAFEAARPLGTAFFRQSWDALRDALVDVPTDAPILTYCTGGIRCVKVAAYLEQELGYTNVARLEGGIVSYARYARAAGVASRFRGKNYVFDGRMAERITEDVLAACHQCGAPCDDQRNCANDRCHTRFIQCPQCAQRYQSCCSNGC-VQQRAYEAGLASLSPR----------------------VGALAAAEEHGGDASEAQPDALPQXXXXXXXRSPLALQPWLQPQPFQSAPLNLLFDRVIEAHRDGADD-----------DSGDDEIVAALGDVARLGGAKDALVVSAAAAGSS--SSVQAVCEALSGAGAAVTL 588
BLAST of mRNA_P-littoralis_Contig198.1.1 vs. uniprot
Match: A0A7S1XXX2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XXX2_9STRA) HSP 1 Score: 293 bits (751), Expect = 6.230e-84 Identity = 185/462 (40.04%), Postives = 251/462 (54.33%), Query Frame = 1
Query: 232 QVEEGDTKTVRVITSSALRGKLRLSGRHKRGRVFLPTDPPGGSLETLHRLLKETFPLGDFPVALYVKTS---------------LDEGAE------RSMLESDERLLAAVS--------WAEGQGLGLNVFVDVVSTAGVAPDYEEERAPECCWTSPTPKRLTSGRC*ASTASSTSTSQSFANMLQLAWAPLGVRGRVYVASEGSTRRWPCLAPATGRFERAVEAVGSWRACKYLNRAERRWSGEEFRQDPPFSALHVRARKQIVADGLSQPLEWSDRSGKVGKGLSPEEWHEMMDSEEGATILDCRNSYESVVGTFDDALPLDTSFFRESWGELERLVGDSDRDAPIMTYCTGGIRCVKIAAYLEQEMGFTNVTRLEGGVVSYSKFAKERGLKSKFKGMNYVFDKRMGDKVTGDMLSKCHQCGQPCADHTNCANSCCHARLIQCQSCAS--EYNACCSRGC 1524
++ G+ K VR+ T ALR R++ R +RG+VFLP D G + L ++E L D P + T+ L G E M E E LA V+ W E + G V + + + A P + P P P + S ++ A + +L WAP G GRVYVA+EG + + F + + R+ Y N + + EE + PF ALHVR R +IVADGL + L+W+ K G+ + PEEWH+++ EE +LDCRNSYE+ VG FD A PL+T+FFRESWG L+ + D +DAP+MTYCTGGIRCVK+ A+LEQE+G TN RLEGG+VSY+KF +E+G +S FKG+NYVFD+RMG KVT D+L +C+ CG TNCAN CH R++QC C + YN CCS C
Sbjct: 59 RLARGEIKPVRIFTLGALREFQRVASRKRRGKVFLPVDETG-EVGALRDEVRELLGLKDIPFEMRELTTELREKMLSGWEPNAVLAAGEEVNRETIMGMREEFEVDLAEVATAADLERLWTEAEAEGDAVCIGITAEAEALPFRDP--TPALYPGMPEPGGDWTVLSFYSFEPIEDPEEAAAELRRL-WAPTGATGRVYVANEGINAQMTVASNVMSYFMEGTRLLPALRSV-YFN-VDHEFDPEEC-DEAPFRALHVRVRDKIVADGLDRELDWN----KGGREVPPEEWHDLVKGEETPILLDCRNSYETEVGRFDGAEPLNTTFFRESWGILKDRLKDVPKDAPVMTYCTGGIRCVKVNAWLEQELGLTNTMRLEGGIVSYTKFVEEQGEESTFKGVNYVFDERMGRKVTDDLLGECYTCGAKSNHITNCANPTCHVRIVQCGECGAPQNYNGCCSIEC 509
BLAST of mRNA_P-littoralis_Contig198.1.1 vs. uniprot
Match: A0A4D9D2K2_9STRA (Rhodanese domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D2K2_9STRA) HSP 1 Score: 299 bits (765), Expect = 4.520e-83 Identity = 181/470 (38.51%), Postives = 253/470 (53.83%), Query Frame = 1
Query: 259 VRVITSSALRGKLRLSGRHKRGRVFLPTDPPGGSLETLHRLLKETFPLGDFPVALYVKTS---------------------LDEGAERSMLESDERLLAAVSWAEGQGLGLNVFV--DVVSTAGVAPDYEEERAPECCWTSPTPKRLTSGRC*ASTASSTSTSQSFANMLQLAWAPLGVRGRVYVASEGSTRRWPCLAPATGRFERAVEAVGSWRACKYLNRAERRWSGEEFRQDPPFSALHVRARKQIVADG---LSQPLEWSDRSGKVGKGLSPEEWHEMMDSEEGATILDCRNSYESVVGTFDDALPLDTSFFRESWGELERLVGDSDRDAPIMTYCTGGIRCVKIAAYLEQEMGFTNVTRLEGGVVSYSKF--------------------AKERGL--KSKFKGMNYVFDKRMGDKVTGDMLSKCHQCGQPCADHTNCANSCCHARLIQCQSCASEYNACCSRGC 1524
VRV+ LR LRL+ R K+ R+F+P + SL + ++FP+ P + V+ D GA L+SDE L A++ A+ +G+ L V++ D + A + P Y + SP+ + ++ R A S A L+ W P G GRVYVASEG + A F RA ++ YLNR +R ++ Q+P F ALH+R R+Q+VADG + +W D G+G+ PEEWHE +D + +LDCRN +ES VG F A PL+TSFFRESW L+ + D +D PI+TYCTGGIRC+K+ AYL+QE+GF NV RLEGG+VSY++ A G+ SKFKG+NYVFD R+G+++T D+LS+C QCG P ++ NCAN CH R +QC+SC ++ CCSRGC
Sbjct: 69 VRVLVDVDLRQTLRLTRREKKARLFIPLESTA-SLSLFLDQIYQSFPVEGMPHNIVVRVRRKEGSGAVGEEDGEHGPGRDHADTGALHVTLKSDEDLARALAEAQKEGMSLQVYIRTDKSAAAAMVPTYLRDMPDPRA--SPSMQMVSFYRFFAPPLESEEALDLLAKKLRAVWEPFGALGRVYVASEGINAQMAVPATVFPHFARACASLEELTGV-YLNR-DREVDMGQYAQEPAFDALHIRIREQVVADGGLSAEREFDWGD----CGRGMHPEEWHEKVD-DSNVLVLDCRNEFESEVGRFVTAEPLNTSFFRESWDVLKTRLADVPKDKPILTYCTGGIRCIKVGAYLKQELGFQNVARLEGGIVSYARHLRGTQDAGQDTRSQSEARVDASMAGIIPSSKFKGINYVFDNRLGERITEDVLSRCDQCGVPSDNYVNCANPNCHVRFLQCESCGQSHHGCCSRGC 528
BLAST of mRNA_P-littoralis_Contig198.1.1 vs. uniprot
Match: A0A0G4GLG9_VITBC (Rhodanese domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GLG9_VITBC) HSP 1 Score: 271 bits (694), Expect = 9.200e-75 Identity = 211/627 (33.65%), Postives = 283/627 (45.14%), Query Frame = 1
Query: 406 DFPVALYVKTSLDEGA---ERSMLESDERLLAAVSWAEGQGLGLNVFVDVVSTAGVAPDYEEERAPECCWTSPTPKRLTSGRC*ASTASSTSTSQSF------------ANMLQLAWAPLGVRGRVYVASEGSTRRWPCLAPATGRFERAVEAV-----------------------GSWRACKYLNRAERRW-------------SGEEFRQDP--------------PFSALHVRARKQIVADGLSQPLEWSDRSGKVGKGLSPEEWHEMMDSEEGATILDCRNSYESVVGTFDDALPLDTSFFRESWGELERLVGDSDRDAPIMTYCTGGIRCVKIAAYLEQEMGFTNVTRLEGGVVSYSKFAKERGLKSKFKGMNYVFDKRMGDKVTGDMLSKCHQCGQPCADHTNCANSCCHARLIQCQSCASEYNACCSRGCHEQQHSREALRASLMRREREAMGLPALPTTATSAVGATSVAAVAVAVAGNGDRNEAGISFEETLAGGEVDKLLWLVWPFQDPTLNLLFDRAFDEFRD----SPPP-------RLQREDGDGARDAAEENCSRMIGVVSRLGGGKRALAVGLGSGGPAGRAGLQRLAEALGEGGELVVVEASQEAASAGR 2058
D P LY E A + +++S L + S A +G L + V R + W P P+ L C T S T T SF A + W PL GRVYVASEG + F RA + GS+ K N ++ S E +DP PF LH+R RKQIVADGL +PL+W +G+ +SPEEWHE ++ + +LDCRN+YE+ VG FD A+PL+T++FRESW L + D D++APIM YCTGGIRCVK AYL QE+GF NV RLEGG+++Y+K+ K +G S FKG NYVFD RMG+ +T D+L++C QCG+P + HTNC CH R +QC CA +Y CCSRGC ++QH R SL+ + A GG WL PFQ+ LN +FD A + + + S PP R E R + R++ +SRL +R L +G +G A AE L +GG+LV +E + AA+ R
Sbjct: 2 DIPSHLYAAYGGGEAAVEGDADVVDSAHALKSVWSKAHSRGEKLGLLV---------------RPDDSKWPPPLPEWLVD--CPDPTESPTMTLVSFYRFTPIEDPQLMAESFRKLWEPLKALGRVYVASEGVNAQMAVPTNVLSAFARACNSTSVLDGVPLNCDVAIPMLEYWGDQGSFERWKEENPSDVHMQHVPRAFAHSDDQSDESSGEDPSLSPRRAVPGRTRAPFERLHIRVRKQIVADGLMRPLDWGRETGRE---VSPEEWHENVNRSD-VLVLDCRNTYETDVGRFDTAVPLNTTYFRESWDALNETLKDVDKEAPIMMYCTGGIRCVKTGAYLVQELGFRNVGRLEGGIINYAKYVKGKGQPSLFKGRNYVFDNRMGENITPDVLAQCVQCGKPWSLHTNCRYERCHVRFLQCDECAEKYGGCCSRGC-QRQHER-----SLVETDTHASS-----------------------------------------DGG------WLEPPFQNAQLNRMFDDALEAYAEQHSTSEPPLLADLRQRTAAEMPHALRMLSGPLVGRLLATLSRLLRPERILEIGTFTGYSA-----VCFAEGLADGGQLVTIERDERAAAIAR 549
BLAST of mRNA_P-littoralis_Contig198.1.1 vs. uniprot
Match: A0A7S3A3X5_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A3X5_9RHOD) HSP 1 Score: 251 bits (640), Expect = 1.780e-68 Identity = 129/290 (44.48%), Postives = 175/290 (60.34%), Query Frame = 1
Query: 718 LGVRGRVYVASEGSTRRWPCLAPATGRFERAVEAVGSWRACKYLNRAE--RRWSGEEFR------------QDPPFSALHVRARKQIVADGLSQPLEWSDRSGKVGKGLSPEEWHEMMDSEEGATILDCRNSYESVVGTFDDALPLDTSFFRESWGELERLVGDSDRDAPIMTYCTGGIRCVKIAAYLEQEMGFTNVTRLEGGVVSYSKFAKERGLKSKFKGMNYVFDKRMGDKVTGDMLSKCHQCGQPCADHTNCANSCCHA-----RLIQCQSCASEYNACCSRGCHE 1530
LGV+GRVY+A EG + + E ++ + R AE RW E R D PF L ++ R Q+++DGL +PL+WS G +SPEEWH+ ++S+E +LDCRN YES VG F+ A LDTS FRESW L + + + +D IMTYCTGGIRCVK+ A+LEQEMGF NV RLEGG+V+YS+F + +GL+S+FKG+NYVFD R+G++VT D+L++C CG C T+CAN C +QC CA++ CCS C +
Sbjct: 227 LGVKGRVYIAKEGINAQLCVPSNLLSCLELSLADDPAARGDDLAEIAEWANRWVPREIRGAFLNVDREVTFNDTPFVDLRIKVRAQVLSDGLEKPLDWSSN----GTAVSPEEWHQKLESDEDVILLDCRNKYESQVGKFESAKALDTSTFRESWDWLRKELEGTKKDKRIMTYCTGGIRCVKVGAFLEQEMGFKNVDRLEGGIVAYSRFVRNKGLESQFKGVNYVFDLRLGERVTSDVLTQCLNCGAKCDTQTDCANERCRRPFADRHFVQCPECAAQLKGCCSEDCRQ 512
BLAST of mRNA_P-littoralis_Contig198.1.1 vs. uniprot
Match: A0A7S3A574_9RHOD (Hypothetical protein n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A574_9RHOD) HSP 1 Score: 251 bits (640), Expect = 1.050e-66 Identity = 129/290 (44.48%), Postives = 175/290 (60.34%), Query Frame = 1
Query: 718 LGVRGRVYVASEGSTRRWPCLAPATGRFERAVEAVGSWRACKYLNRAE--RRWSGEEFR------------QDPPFSALHVRARKQIVADGLSQPLEWSDRSGKVGKGLSPEEWHEMMDSEEGATILDCRNSYESVVGTFDDALPLDTSFFRESWGELERLVGDSDRDAPIMTYCTGGIRCVKIAAYLEQEMGFTNVTRLEGGVVSYSKFAKERGLKSKFKGMNYVFDKRMGDKVTGDMLSKCHQCGQPCADHTNCANSCCHA-----RLIQCQSCASEYNACCSRGCHE 1530
LGV+GRVY+A EG + + E ++ + R AE RW E R D PF L ++ R Q+++DGL +PL+WS G +SPEEWH+ ++S+E +LDCRN YES VG F+ A LDTS FRESW L + + + +D IMTYCTGGIRCVK+ A+LEQEMGF NV RLEGG+V+YS+F + +GL+S+FKG+NYVFD R+G++VT D+L++C CG C T+CAN C +QC CA++ CCS C +
Sbjct: 227 LGVKGRVYIAKEGINAQLCVPSNLLSCLELSLADDPAARGDDLAEIAEWANRWVPREIRGAFLNVDREVTFNDTPFVDLRIKVRAQVLSDGLEKPLDWSSN----GTAVSPEEWHQKLESDEDVILLDCRNKYESQVGKFESAKALDTSTFRESWDWLRKELEGTKKDKRIMTYCTGGIRCVKVGAFLEQEMGFKNVDRLEGGIVAYSRFVRNKGLESQFKGVNYVFDLRLGERVTSDVLTQCLNCGAKCDTQTDCANERCRRPFADRHFVQCPECAAQLKGCCSEDCRQ 512
BLAST of mRNA_P-littoralis_Contig198.1.1 vs. uniprot
Match: A0A0G4GFL5_9ALVE (Rhodanese domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GFL5_9ALVE) HSP 1 Score: 254 bits (648), Expect = 1.210e-66 Identity = 219/675 (32.44%), Postives = 310/675 (45.93%), Query Frame = 1
Query: 685 FANMLQLAWAPLGVRGRVYVASEGSTRRWPCLAPATGRFERAVEAVGSWRACK-----------YLNRAERR--WSGEEF--------------------------RQDPPFSALHVRARKQIVADGLSQ-PLEWSDRSGKVGKGLSPEEWHEMMDSE-EGATILDCRNSYESVVGTFDDALPLDTSFFRESWGELERLVGDSDRDAPIMTYCTGGIRCVKIAAYLEQEMGFTNVTRLEGGVVSYSKF-------AKERG---------LKSKFKGMNYVFDKRMGDKVTGDMLSKCHQCGQPCADHTNCANSCCHARLIQCQSCASEYNACCSRGCHEQQHSREALRASLMRREREAMGLP------------ALPTTATSAVGATSVAAVAVAVAGNGDRNEAGISFEETLAGGEVDKLLWLVWPFQDPTLNLLFDRAFDEFR-------DSPPPRLQR--------EDGDGARDAAEENCS----RMIGVVSRLGGGKRALAVGLGSGGPAGRAGLQRLAEALGEGGELVVVEASQEAASAGRGLSLVSRARGCSVQVMVCDDGAIVENVETAAVKTVGTAPLAVDGG--EEGEEASG---GPAPRSSAGKDLFDVILLGGGVGTEAAELVTVGDGDGEGASIPERGRTPAGRLDLVLDRRLIKRTGLVLCD 2430
F+++L+ W PL GRVYVA EG + RF+ A ++ + + Y ER G+E R PF L V+ R+QIVADGL + PL+ G L P EWHE ++ G ILDCRN YES VG F+ +LPL+T+FFRESWG LE ++ ++D+DAP++ YCTGGIRC K +AYL++ +GF +V L GGV++YS+F A++RG +SKF G+NYVFD RMG ++T D ++ C CG PC+ TNC CH R +QC+ C +EY CCSRGC ++ + EA A+L + R + LP ALP + V + ++ A G D + S++E E WL PFQ LN +FD D + + PP L+ EDG+G A R + ++S+L K L +G +G A L+E L EGG LV VE AA+ R + +A S +V DG A+ + +P GG EEGE S G + +G FD++ + D D + D +L+R L+++ GLVL D
Sbjct: 255 FSDILRRLWTPLKALGRVYVAPEGINAQMAIPGNVLDRFKEATWSLAELKGMRINEDVTVSSDEYWGPTERPPGEDGDEATAGHLPPSSPSSSVGGPGSVGFPVPGRTSAPFDRLKVKPREQIVADGLGEKPLK---APGDTEDDLDPAEWHERLERPPSGQIILDCRNIYESEVGRFEGSLPLNTTFFRESWGVLEEVLEETDKDAPVLMYCTGGIRCAKASAYLKERLGFRDVRALRGGVINYSRFIREEAERARDRGDMNEEERTPPESKFVGVNYVFDNRMGQRITSDDITTCDLCGAPCSSLTNCGFEKCHVRFVQCERCHTEYAGCCSRGC-QRSAAAEAEEAALRQLPRGSPSLPGNFYRTRGGEAKALPRGVSLIVPSGTLEGKAKGEEGGNDETQIP-SWDEQNGASET---AWLNPPFQSARLNRMFDDVLDRYHVYASDHSSAEPPLLRELREATETDEDGNGLAGGAHMISGPLQGRFLSLLSKLLKPKNILELGTFTGYSA-----LCLSEGLAEGGRLVTVEKDPRAAAVAR--CFIDKAGLSSCVDLVEADG-------LEALTSPSLSPRITGGGTGEEGETESAFETGGVGGTRSGFGGFDLVFV---------------DADK---------KRYGAYFDTLLERNLLRKGGLVLFD 883
BLAST of mRNA_P-littoralis_Contig198.1.1 vs. uniprot
Match: A0A7S1FTY3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FTY3_9STRA) HSP 1 Score: 232 bits (591), Expect = 9.920e-64 Identity = 135/315 (42.86%), Postives = 171/315 (54.29%), Query Frame = 1
Query: 685 FANMLQLAWAPLGVRGRVYVASEGSTRRWPCLAPATGRFE---RAVEAVGSWRACKY----LNRAERRWSGEEFRQD----PPFSALHVRARKQIVADGLSQPLEWSDRSGKVGKGLSPEEWHEMMDSEEGAT----------ILDCRNSYESVVGTFDDALPLDTSFFRESWGELERLVGDSDRDAPIMTYCTGGIRCVKIAAYLEQEMGFTNVTRLEGGVVSYSKFAKERGLK-SKFKGMNYVFDKRMGDKVTGDMLSKCHQCGQPCADHTNCANSCCHARLIQCQSCASEYNACCSRGCHEQQHSREALRAS 1563
FA L+ W G GRVYVA EG + F R+V +G + A R ++ +D PPF ALH+R R Q+VADGL PL+W G + PEEWHE + + A +LDCRN YE+ VG F DA PL T FR+SW L + D+ RDAPIM YCTGGIRCVK+ AYL Q+MGFTNV+RL GG+V+Y + K S F+G+NYVFD R+G ++T D+L KC C P + TNC N CH R++QC CA + CS C R+ LRAS
Sbjct: 91 FARRLKGMWRAFGAMGRVYVAHEGVNAQMAVPTNVLENFRVCCRSVPELGEHMENDINVDPVPLAMRDYAAAGQARDGKPAPPFKALHIRVRTQVVADGLDAPLDWQS----AGYDMPPEEWHERLKGRDNADTDTSKTDAPILLDCRNDYETGVGRFVDAEPLGTQNFRDSWDVLHDRLADTPRDAPIMAYCTGGIRCVKVGAYLTQKMGFTNVSRLAGGIVAYDRAISPLPEKDSLFRGVNYVFDGRVGREITDDVLGKCVTCDAPASVATNCRNPACHERMVQCDRCAELFEGTCSEAC------RDRLRAS 395 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig198.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig198.1.1 >prot_P-littoralis_Contig198.1.1 ID=prot_P-littoralis_Contig198.1.1|Name=mRNA_P-littoralis_Contig198.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=629bp MLQLAWAPLGVRGRVYVASEGSTRRWPCLAPATGRFERAVEAVGSWRACKback to top mRNA from alignment at P-littoralis_Contig198:2..12186+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig198.1.1 ID=mRNA_P-littoralis_Contig198.1.1|Name=mRNA_P-littoralis_Contig198.1.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=12185bp|location=Sequence derived from alignment at P-littoralis_Contig198:2..12186+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig198:2..12186+ >mRNA_P-littoralis_Contig198.1.1 ID=mRNA_P-littoralis_Contig198.1.1|Name=mRNA_P-littoralis_Contig198.1.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1887bp|location=Sequence derived from alignment at P-littoralis_Contig198:2..12186+ (Pylaiella littoralis U1_48)back to top |