mRNA_P-littoralis_Contig197.97.3 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig197.97.3 vs. uniprot
Match: D8LS41_ECTSI (Uroporphyrinogen-III synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS41_ECTSI) HSP 1 Score: 361 bits (927), Expect = 4.350e-113 Identity = 235/401 (58.60%), Postives = 254/401 (63.34%), Query Frame = 3
Query: 336 RSVRRSSTTVVTEAMMRAVCGLLLLAVPSCTGFNSVP-THWRHRQQXXXXXXXXXXXXXXXXXXXXXXXXSSERAGTADGACTPTGATVVLTREAGKNGKLAKLLADAGISSIEVPCIAHQDGPDLPLLPAALADPGLTYVVVTSPEAAKVFLSGWSKAGNPSVSV--ACVGKATGDALRAKGVTPAFTPSKATGETLAAEIPLVPPSAGDISGDAAAVGAAAAAAVEGVDGAEVVGGSTSLEEKKLLRVLYPASAKAQKTVETGLQARGFEVRRLNTYDTVPATWDETAGAAAAGAAVAAFGSPSAVKTWAARVGVATNGVKGTGGEDAQRPDATDADATGTRGGAGRALAACIGETSARACREAGWPESTIFYPEKPGMEGWAKAVGDALAAAENASSS 1529
RS R STT V A++ A C +P FNS+ H +H++ R TA G C GA V LTREAGKNGKLAKLL DAGISS+EVPCIAHQDGPDLPLLPAALADPGL YVVVTSPEAAKVFL+GW+KAG P V V ACVGKATGDALRA GV+P FTPSKATGETLAAEIPL P + D + RVLYPASAKAQ T+E+GL+ARGFEVRRLNTYDTVPATWDE+A AAAAGA+VAAFGSPSAVKTWAAR+GV GV A LAACIGETSARACREAGW ES IFYPEKPGMEGWAKAVG ALAA E SS
Sbjct: 2 RSAYRPSTTAV--ALVAAAC------LPLAVSFNSIRIAHEQHQRHFGRSPEWHSGIIGRGETV------GHARPSTARG-CASRGAEVALTREAGKNGKLAKLLTDAGISSVEVPCIAHQDGPDLPLLPAALADPGLAYVVVTSPEAAKVFLAGWAKAGVPGVPVPVACVGKATGDALRAGGVSPVFTPSKATGETLAAEIPLPPSAPADDTXXXXXXX------XXXXXXXXXXXXXXXXXXXXGPRVLYPASAKAQNTLESGLRARGFEVRRLNTYDTVPATWDESAEAAAAGASVAAFGSPSAVKTWAARMGVVAAGVXXXXXXXXXXXXXXXXGA----------LAACIGETSARACREAGWAESAIFYPEKPGMEGWAKAVGQALAAVETFPSS 371
BLAST of mRNA_P-littoralis_Contig197.97.3 vs. uniprot
Match: A0A835YHW0_9STRA (Uroporphyrinogen-III synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHW0_9STRA) HSP 1 Score: 245 bits (625), Expect = 1.180e-70 Identity = 160/307 (52.12%), Postives = 182/307 (59.28%), Query Frame = 3
Query: 585 TGATVVLTREAGKNGKLAKLLADAGISSIEVPCIAHQDGPDLPLLPAALADPGLTYVVVTSPEAAKVFLSGWSKAGNPSVSVACVGKATGDALRAKGVTPAFTPSKATGETLAAEIPLVPPSAGDISGDAAAVGAAAAAAVEGVDGAEVVGGSTSLEEKKLLRVLYPASAKAQKTVETGLQARGFEVRRLNTYDTVPATWDETAGAAAAGAAVAAFGSPSAVKTWAARVGVATNGVKGTGGEDAQRPDATDADATGTRGGAGRALAACIGETSARACREAGWPESTIFYPEKPGMEGWAKAVGDALA 1505
T TV LTREAG NGKL LL GI+ +EVPCIA DGPD LP LA YV+VTSPE+AKVFL W A P+VSVACVG ATGDALRA+G+ PAFTPS+A GE LAAEIPL PPSA AVG GG+ RVLYPAS +A TV+ GL+ARGF V RLNTYDT A W + + AA AAVAAFGSPSAVK W + +GV A AACIG TSA+A + AGW + IF+PEKPGM GWA+AV +ALA
Sbjct: 32 TSRTVALTREAGNNGKLEALLVAKGINCVEVPCIAFTDGPDSAQLPQHLASGAYDYVIVTSPESAKVFLQAWDAAERPNVSVACVGTATGDALRARGLEPAFTPSRAYGEDLAAEIPL-PPSA--------AVGE---------------GGAP--------RVLYPASTRAPGTVQEGLEARGFHVVRLNTYDTGAAAWSDADLSNAARAAVAAFGSPSAVKAWVSHMGVEA------------------------------AAAACIGVTSAKAAKAAGWADDRIFWPEKPGMPGWAQAVEEALA 276
BLAST of mRNA_P-littoralis_Contig197.97.3 vs. uniprot
Match: L1JFY6_GUITC (Uroporphyrinogen-III synthase n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JFY6_GUITC) HSP 1 Score: 204 bits (518), Expect = 6.840e-56 Identity = 142/313 (45.37%), Postives = 168/313 (53.67%), Query Frame = 3
Query: 597 VVLTREAGKNGKLAKLLADAGISSIEVPCIAHQDGPDLPLLPAALADPGLTYVVVTSPEAAKVFLSGWSKAGNPSVSVACVGKATGDALRAKGVTPAFTPSKATGETLAAEIPLVPPSAGDISGDAAAVGAAAAAAVEGVDGAEVVGGSTSLEEKKLLRVLYPASAKAQKTVETGLQARGFEVRRLNTYDTVPATWDETAGAAAAGAAVAAFGSPSAVKTWAARVGVATNGVKGTGGEDAQRPDATDADATGTRGGAGRALAACIGETSARACREAGWPESTIFYPEKPGMEGWAKAVGDALAAAENASSSSS 1535
V LTRE GKN KL K L++ G+ ++E+PCIA + G D LP+AL + YVVVTSPEAA VFL W A PS+ VACVG T AL+ G+ P F PSKATG+TLA E+P G + G RVLYPASAKA+ V+ GL ARGF V RLNTYDTV ATW E AA AAV A SPSAVKTWA R+G + AACIGETSA AC+E G+ +F+PE PG+ GWA+AV DAL E+A S S
Sbjct: 24 VALTRELGKNLKLEKALSEKGVRTVELPCIAFEAGIDSDSLPSALKE-DWEYVVVTSPEAASVFLDAWRLASQPSLQVACVGTGTKQALQEGGIEPVFMPSKATGKTLADELP----------------------------GPQGNG-----------RVLYPASAKARTEVQGGLTARGFTVTRLNTYDTVSATWSEQELQMAASAAVVALASPSAVKTWAERLGT-------------------------------KQYAACIGETSASACKELGFEH--VFWPESPGIPGWAQAVHDALEEMESAEMSRS 263
BLAST of mRNA_P-littoralis_Contig197.97.3 vs. uniprot
Match: A0A7S0HHZ2_9CRYP (Uroporphyrinogen-III synthase n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HHZ2_9CRYP) HSP 1 Score: 206 bits (523), Expect = 9.190e-56 Identity = 136/302 (45.03%), Postives = 163/302 (53.97%), Query Frame = 3
Query: 597 VVLTREAGKNGKLAKLLADAGISSIEVPCIAHQDGPDLPLLPAALADPGLTYVVVTSPEAAKVFLSGWSKAGNPSVSVACVGKATGDALRAKGVTPAFTPSKATGETLAAEIPLVPPSAGDISGDAAAVGAAAAAAVEGVDGAEVVGGSTSLEEKKLLRVLYPASAKAQKTVETGLQARGFEVRRLNTYDTVPATWDETAGAAAAGAAVAAFGSPSAVKTWAARVGVATNGVKGTGGEDAQRPDATDADATGTRGGAGRALAACIGETSARACREAGWPESTIFYPEKPGMEGWAKAVGDAL 1502
V LTRE GKN KL K+L++ GI ++E+PCIA + G D LP AL + YVVVTSPEAA VFL W +AG PS+ VACVG T AL+ G+ P F PSKATG+TLA E+P ++ RVLYPASAKA+ V+ GL ARGF V RLNTYDTV ATW + A AAV A SPSAVKTWA R+G + AACIGETSA AC+E G+ +F+PE PG+ GWA+AV DAL
Sbjct: 88 VALTRELGKNSKLEKVLSEKGIRTVELPCIAFEAGTDAETLPKALQEEW-EYVVVTSPEAASVFLDAWREAGEPSLPVACVGAGTKQALQEGGIEPVFMPSKATGKTLADELP---------------------------------------GPRRSGRVLYPASAKARTEVQGGLTARGFSVTRLNTYDTVSATWSDKELQMGASAAVIALASPSAVKTWAERLGT-------------------------------KQYAACIGETSAAACKELGFEH--VFWPESPGILGWAQAVHDAL 316
BLAST of mRNA_P-littoralis_Contig197.97.3 vs. uniprot
Match: A0A7S2PU27_9STRA (Uroporphyrinogen-III synthase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PU27_9STRA) HSP 1 Score: 204 bits (518), Expect = 4.250e-55 Identity = 141/316 (44.62%), Postives = 168/316 (53.16%), Query Frame = 3
Query: 597 VVLTREAGKNGKLAKLL-ADAGISSI------------EVPCIAHQDGPDLPLLPAALADPGLTYVVVTSPEAAKVFLSGWSKAGNPSV-SVACVGKATGDALRAKGVTPAFTPSKATGETLAAEIPLVPPSAGDISGDAAAVGAAAAAAVEGVDGAEVVGGSTSLEEKKLLRVLYPASAKAQKTVETGLQARGFEVRRLNTYDTVPATWDETAGAAAAGAAVAAFGSPSAVKTWAARVGVATNGVKGTGGEDAQRPDATDADATGTRGGAGRALAACIGETSARACREAGWPESTIFYPEKPGMEGWAKAVGDAL 1502
+ LTRE GKNGKL K L +++ I I E+PCIAH DGPD +L L+ YV +TSPEAAKVF + W G P V SVA VGKAT +AL+A G+ AF PSKAT TL E+P + + + G STSL LYPASAKAQ T++ GL+ RGF V RLNTYDTV ATW + A VA F SPSAVK W VK T D R ALAACIGETS AC++ GW E IFYPEKPG++GWA++V +AL
Sbjct: 63 IALTREEGKNGKLNKALQSNSNIKQIISSSSGSAMEVNEIPCIAHADGPDSDILGKTLSSSDFDYVAITSPEAAKVFATAWIDEGRPKVGSVAAVGKATQEALKAYGIDVAFVPSKATAATLVKELPTLEEATNE-------------------------GRSTSL--------LYPASAKAQDTLQNGLEERGFIVTRLNTYDTVTATWTPEEESLAKSTTVACFASPSAVKAW----------VKNTAQLDCPR-----------------ALAACIGETSFAACKKNGWKEEDIFYPEKPGIDGWAESVANAL 318
BLAST of mRNA_P-littoralis_Contig197.97.3 vs. uniprot
Match: A0A7S4JXA4_9STRA (Uroporphyrinogen-III synthase n=3 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JXA4_9STRA) HSP 1 Score: 202 bits (514), Expect = 1.390e-54 Identity = 147/333 (44.14%), Postives = 175/333 (52.55%), Query Frame = 3
Query: 543 SSERAGTADGAC---TPTGATVVLTREAGKNGKLAKLL------ADA-GISSIEVPCIAHQDGPDLPLLPAALADPGLTYVVVTSPEAAKVFLSGWSKAGNPSVS-VACVGKATGDALRAKGVTPAFTPSKATGETLAAEIPLVPPSAGDISGDAAAVGAAAAAAVEGVDGAEVVGGSTSLEEKKLLRVLYPASAKAQKTVETGLQARGFEVRRLNTYDTVPATWDETAGAAAAGAAVAAFGSPSAVKTWAARVGVATNGVKGTGGEDAQRPDATDADATGTRGGAGRALAACIGETSARACREAGWPESTIFYPEKPGMEGWAKAVGDALAA 1508
SS+ + +ADG T V LTRE GKN KL + L DA + E+PCI H DG D L L + YV VTSPEAA+V S W AG PS+ +A VGKATG+AL A G+ F PSKAT +TL E+P PS D A G T+L LYPASAKA+ T++ GL+ RGF+V RL+TYDTVPA+W E A A VA F SPSAV W V+ GGE G +G AACIGETSA+ CR+ GW E I+YPEKPG+EGWA AV DAL A
Sbjct: 41 SSDLSASADGETETETKEEVLVALTREDGKNSKLLRALLSHPRIGDAIPVDIEEIPCIEHADGDDYDRLGPTLKERSFDYVAVTSPEAARVLASAWEGAGRPSMGKIAAVGKATGEALIALGIEVDFVPSKATAKTLVEELP---PS----------------------DDATAEGRPTTL--------LYPASAKARPTLQNGLEGRGFDVTRLDTYDTVPASWSEDRTDLAREAGVACFASPSAVNAW----------VENLGGEG--------------EGCSGDVAAACIGETSAQGCRDMGWDEGDIYYPEKPGVEGWANAVADALEA 316
BLAST of mRNA_P-littoralis_Contig197.97.3 vs. uniprot
Match: B8BVT8_THAPS (Uroporphyrinogen-III synthase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BVT8_THAPS) HSP 1 Score: 198 bits (504), Expect = 3.990e-53 Identity = 140/315 (44.44%), Postives = 168/315 (53.33%), Query Frame = 3
Query: 597 VVLTREAGKNGKLAK-LLADAGISSI-----------EVPCIAHQDGPDLPLLPAALADPGLTYVVVTSPEAAKVFLSGWSKAGNPSVS-VACVGKATGDALRAKGVTPAFTPSKATGETLAAEIPLVPPSAGDISGDAAAVGAAAAAAVEGVDGAEVVGGSTSLEEKKLLRVLYPASAKAQKTVETGLQARGFEVRRLNTYDTVPATWDETAGAAAAGAAVAAFGSPSAVKTWAARVGVATNGVKGTGGEDAQRPDATDADATGTRGGAGRALAACIGETSARACREAGWPESTIFYPEKPGMEGWAKAVGDAL 1502
V LTRE GKN KL K LL++ I + E+PCI H DGPD L LA YV +TSPEAAKV ++ W +AG P + VA VGKAT ++L+ G+ AF PSKAT TL E+PL D A G S++L YPAS KA T++ GL+ RGF+V RLNTYDTVPA+WDE A A VA F SPSAVK W +K T G + +P RA AACIGETSA ACR+ W ES IFYPEKPG++GWA +V DAL
Sbjct: 67 VALTREEGKNDKLRKALLSNEHIQQLSQSSGVAVDIHEIPCIEHADGPDTDKLVPTLASTQFDYVAITSPEAAKVLVNAWIEAGRPQLGKVAAVGKATQESLKEFGIEVAFVPSKATAATLVKELPLS-------------------------DAATKEGRSSTL--------FYPASNKAADTLQNGLEERGFDVMRLNTYDTVPASWDEEQTLLAQSANVACFASPSAVKAW----------LKNTDGMN--KP--------------ARAKAACIGETSAEACRKNQWDESDIFYPEKPGVDGWAVSVADAL 322
BLAST of mRNA_P-littoralis_Contig197.97.3 vs. uniprot
Match: A0A7S2EAC0_TRICV (Uroporphyrinogen-III synthase n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EAC0_TRICV) HSP 1 Score: 192 bits (489), Expect = 1.740e-50 Identity = 139/318 (43.71%), Postives = 167/318 (52.52%), Query Frame = 3
Query: 591 ATVVLTREAGKNGKLAKLL------ADA-GISSIEVPCIAHQDGPDLPLLPAALADPG----LTYVVVTSPEAAKVFLSGWSKAGNPSVS-VACVGKATGDALRAKGVTPAFTPSKATGETLAAEIPLVPPSAGDISGDAAAVGAAAAAAVEGVDGAEVVGGSTSLEEKKLLRVLYPASAKAQKTVETGLQARGFEVRRLNTYDTVPATWDETAGAAAAGAAVAAFGSPSAVKTWAARVGVATNGVKGTGGEDAQRPDATDADATGTRGGAGRALAACIGETSARACREAGWPESTIFYPEKPGMEGWAKAVGDALAA 1508
A V LTRE GKN KL + L DA + E+PCIAH DGPD +L AL+ G YV VTSPEAA+V + W AG P + V VGKAT +AL +G+ F PSKAT +TL E+P SGDA G +L +LYPASAKA+KT+E GL+ RGF V RL+TYDT+PATW A VA F SPSA+ W + ED + G RG AACIGETSA+ CR+ GW E IFYPEKPG++GWA+AV DAL A
Sbjct: 113 AVVALTREDGKNAKLLRALLSHPRIGDAIPVDLEEIPCIAHADGPDSDMLGPALSGKGGFGAFDYVAVTSPEAARVLAAAWEAAGRPDLGEVVAVGKATEEALLREGIRVGFVPSKATAKTLVEELPE--------SGDATMEG-------------------------RLTTLLYPASAKAKKTLEQGLEERGFVVTRLDTYDTIPATWTPEKKNKADLVRVACFASPSAITGWLQNL------------EDTEG---------GRRGNT--IAAACIGETSAQMCRDMGWDEGNIFYPEKPGVDGWAEAVADALEA 374
BLAST of mRNA_P-littoralis_Contig197.97.3 vs. uniprot
Match: A0A1Z5JYL0_FISSO (Uroporphyrinogen-III synthase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JYL0_FISSO) HSP 1 Score: 188 bits (477), Expect = 7.550e-50 Identity = 129/301 (42.86%), Postives = 156/301 (51.83%), Query Frame = 3
Query: 606 TREAGKNGKLAKLLADAGISSIEVPCIAHQDGPDLPLLPAALADPGLTYVVVTSPEAAKVFLSGWSKAGNPSV-SVACVGKATGDALRAKGVTPAFTPSKATGETLAAEIPLVPPSAGDISGDAAAVGAAAAAAVEGVDGAEVVGGSTSLEEKKLLRVLYPASAKAQKTVETGLQARGFEVRRLNTYDTVPATWDETAGAAAAGAAVAAFGSPSAVKTWAARVGVATNGVKGTGGEDAQRPDATDADATGTRGGAGRALAACIGETSARACREAGWPESTIFYPEKPGMEGWAKAVGDALA 1505
TRE GKN +L K + + +E+PCIAH DGPD L L + YV +TSPEAA+V S W P+ +V VGKAT DAL+A G+ AF PSKAT E L E+PL PS ++++ +VLYPAS +AQ T++ GL RGF V RLNTYDTV A W+E AA +A F SPSAVK W + T +A LAACIGETSA+ACRE GW E IFYPEKPGMEGW AV +A A
Sbjct: 52 TREQGKNEQLMKGIRGIHLHPVELPCIAHADGPDFSSLQETLQNNHWDYVTITSPEAARVLSSAWQHCTWPTPPAVVAVGKATEDALQAAGIAVAFCPSKATAEVLVQELPL--PS----------------------------------QQQQQPKVLYPASVRAQTTLQDGLTQRGFTVVRLNTYDTVTAHWNEHETVQAAQVQIACFASPSAVKGW----------LLNTENNNA-------------------VLAACIGETSAKACRERGWDEEHIFYPEKPGMEGWVNAVAEAAA 287
BLAST of mRNA_P-littoralis_Contig197.97.3 vs. uniprot
Match: A0A1Z5JNA0_FISSO (Uroporphyrinogen-III synthase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JNA0_FISSO) HSP 1 Score: 184 bits (467), Expect = 1.740e-48 Identity = 126/303 (41.58%), Postives = 149/303 (49.17%), Query Frame = 3
Query: 606 TREAGKNGKLAKLLADAGISSIEVPCIAHQDGPDLPLLPAALADPGLTYVVVTSPEAAKVFLSGWSKAG---NPSVSVACVGKATGDALRAKGVTPAFTPSKATGETLAAEIPLVPPSAGDISGDAAAVGAAAAAAVEGVDGAEVVGGSTSLEEKKLLRVLYPASAKAQKTVETGLQARGFEVRRLNTYDTVPATWDETAGAAAAGAAVAAFGSPSAVKTWAARVGVATNGVKGTGGEDAQRPDATDADATGTRGGAGRALAACIGETSARACREAGWPESTIFYPEKPGMEGWAKAVGDALA 1505
TRE GKN +L K + ++ +E+PCIAH DGPD L L YV +TSPEAA+V S W P +V VGKAT DAL+A G+T F PSKAT E L E+PL + RVLYPAS +AQ T++ GL RGF V RLNTYDTV A W+E AA +A F SPSAVK W E+ + LAACIGETSA+ACRE GW E IFYP+KPGMEGW AV +A A
Sbjct: 52 TREQGKNEQLMKGIRAIHLNPVELPCIAHADGPDFSSLQETLETNPWDYVTITSPEAARVLSSAWQHCTWQTTPPPAVVAVGKATEDALQASGITVTFCPSKATAEVLVQELPL--------------------------------------PSSQQPRVLYPASVRAQTTLQDGLTQRGFTVVRLNTYDTVTAQWNEHETNMAAQVQIACFASPSAVKGWLLNT------------ENNHQ-----------------VLAACIGETSAKACRERGWNEEHIFYPDKPGMEGWVDAVAEAAA 287 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig197.97.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig197.97.3 >prot_P-littoralis_Contig197.97.3 ID=prot_P-littoralis_Contig197.97.3|Name=mRNA_P-littoralis_Contig197.97.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=445bp MFPRPPKAALAPSSAGSTHYRLPAGYMSSCRPLHAGRSVRRSSTTVVTEAback to top mRNA from alignment at P-littoralis_Contig197:410407..416271- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig197.97.3 ID=mRNA_P-littoralis_Contig197.97.3|Name=mRNA_P-littoralis_Contig197.97.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=5865bp|location=Sequence derived from alignment at P-littoralis_Contig197:410407..416271- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig197:410407..416271- >mRNA_P-littoralis_Contig197.97.3 ID=mRNA_P-littoralis_Contig197.97.3|Name=mRNA_P-littoralis_Contig197.97.3|organism=Pylaiella littoralis U1_48|type=CDS|length=1335bp|location=Sequence derived from alignment at P-littoralis_Contig197:410407..416271- (Pylaiella littoralis U1_48)back to top |