prot_P-littoralis_Contig197.96.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig197.96.1
Unique Nameprot_P-littoralis_Contig197.96.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length227
Homology
BLAST of mRNA_P-littoralis_Contig197.96.1 vs. uniprot
Match: D8LS40_ECTSI (Rab50, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS40_ECTSI)

HSP 1 Score: 424 bits (1091), Expect = 8.070e-150
Identity = 215/226 (95.13%), Postives = 218/226 (96.46%), Query Frame = 0
Query:    1 MAEHGAPKTSVEFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITATDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKLVLAIACTKTDMESKRVVSRARAEFFATEVGGILCETSAKENWGVNELFARVCDRAMETRGAELRGEASGGGAGAGARKSKFGLSPAAHAAGFGGDSGGESSGGCCG 226
            MAE GAPKTSVEFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITATDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKLVLAIACTKTDMESKRVVSRARAE FATEVGGI+CETSAKENWGVNELFARVCDRAMETRG ELRG+ASGG AG G RKSKFGLSPAAHAAGFGGD+G ES GGCCG
Sbjct:    1 MAEPGAPKTSVEFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITATDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKLVLAIACTKTDMESKRVVSRARAEHFATEVGGIICETSAKENWGVNELFARVCDRAMETRGPELRGQASGGAAGTGGRKSKFGLSPAAHAAGFGGDTGAESGGGCCG 226          
BLAST of mRNA_P-littoralis_Contig197.96.1 vs. uniprot
Match: A0A7S2XTR6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XTR6_9STRA)

HSP 1 Score: 285 bits (728), Expect = 4.480e-95
Identity = 138/179 (77.09%), Postives = 155/179 (86.59%), Query Frame = 0
Query:    5 GAPKTSVEFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITATDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKLVLAIACTKTDMESKRVVSRARAEFFATEVGGILCETSAKENWGVNELFARVCDRAMETRGAEL 183
            GAP   VEFKVVVLGDKGVGKTCLVLRFIEGYF+PKQQSTIGAFFLTK+I    G  CKMQIWDTAGQERFRAMAP+YYRNAA A+VCFDI DE+SF KMKDWVEEL+TNVPEGKLVLAIAC KTD+ES RVVSRARAE ++  +  I CETSAKENWGVNE+F +V ++ +ETRG ++
Sbjct:    8 GAP---VEFKVVVLGDKGVGKTCLVLRFIEGYFSPKQQSTIGAFFLTKKIQTEGGVNCKMQIWDTAGQERFRAMAPMYYRNAAAAIVCFDITDEDSFTKMKDWVEELKTNVPEGKLVLAIACNKTDLESNRVVSRARAEQYSAAIKAIYCETSAKENWGVNEIFEKVSEKVIETRGLQV 183          
BLAST of mRNA_P-littoralis_Contig197.96.1 vs. uniprot
Match: A0A7S3Y4J2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y4J2_HETAK)

HSP 1 Score: 276 bits (707), Expect = 3.130e-91
Identity = 133/177 (75.14%), Postives = 149/177 (84.18%), Query Frame = 0
Query:   11 VEFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITATDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKLVLAIACTKTDMESKRVVSRARAEFFATEVGGILCETSAKENWGVNELFARVCDRAMETRGAELRGEA 187
            VEFKVVVLGDKGVGK+CLVLRFIEGYF+PKQQSTIGAFFL+K I A DGT CKMQIWDTAGQERFRAMA +YYRNAA A+VCFDI DEESF KMKDWV+EL+ NVPEG+LVLAIA TKTD+E++R VSR RAE +A  +G + CETSAKENWGV E+F     R +E RG ELR  A
Sbjct:   12 VEFKVVVLGDKGVGKSCLVLRFIEGYFSPKQQSTIGAFFLSKTIEAADGTACKMQIWDTAGQERFRAMASMYYRNAAAAIVCFDITDEESFSKMKDWVQELKANVPEGRLVLAIAATKTDLEAQRAVSRGRAEQYAQSIGALCCETSAKENWGVTEVFEAAAARVLELRGPELRAAA 188          
BLAST of mRNA_P-littoralis_Contig197.96.1 vs. uniprot
Match: F0XY01_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XY01_AURAN)

HSP 1 Score: 244 bits (624), Expect = 8.210e-79
Identity = 129/204 (63.24%), Postives = 155/204 (75.98%), Query Frame = 0
Query:   12 EFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITATDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKLVLAIACTKTDMESKRVVSRARAEFFATEVGGILCETSAKENWGVNELFARVCDRAMETRGAEL---RGEASGGGAGAGARKSKFGLSPAAHAAGF 212
            EFK+V+LGD+GVGKTCLVLRFIEG +  +QQSTIGAFFLTK+I    G  CK+QIWDTAGQERFRAMAP+YYRNAA A+VCFD+ DE +F  MKDWVEEL+TNV +  LV+AIAC K D+++++V SRARAE FA  +  I+ +TSAKEN+GV ELFA V +  ++ RG EL    G   GGG G G R    GLS AA AAGF
Sbjct:   10 EFKIVLLGDRGVGKTCLVLRFIEGLYNSRQQSTIGAFFLTKKIVTAQGDACKIQIWDTAGQERFRAMAPMYYRNAAAAIVCFDVTDESTFNTMKDWVEELKTNVVDKNLVIAIACNKADLDTRQV-SRARAEQFARSISAIVLDTSAKENFGVAELFAAVSEHVIKLRGQELCSTPGAPRGGGGGPGGR----GLSLAARAAGF 208          
BLAST of mRNA_P-littoralis_Contig197.96.1 vs. uniprot
Match: A0A835ZBF8_9STRA (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBF8_9STRA)

HSP 1 Score: 235 bits (600), Expect = 5.630e-76
Identity = 114/165 (69.09%), Postives = 133/165 (80.61%), Query Frame = 0
Query:   12 EFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITATDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGK--LVLAIACTKTDMESKRVVSRARAEFFATEVGGILCETSAKENWGVNELFARVCDR 174
            EFK+ VLGDKGVGKTCLVLRFIEGYF+  QQSTIGAFFLTK +   +G +CK+QIWDTAGQERFRAMAP+YYRNAA A+VC DI DEESF KMKDWVEE++ NVP G+  L + +A  KTD+E +RVVSRARAE FA  +G  + ETSA+ENWGV  LF   C+R
Sbjct:    1 EFKICVLGDKGVGKTCLVLRFIEGYFSQNQQSTIGAFFLTKSLPV-NGVLCKLQIWDTAGQERFRAMAPMYYRNAAAAIVCCDITDEESFDKMKDWVEEIKMNVPVGQQGLAIVLALNKTDLEERRVVSRARAEEFAASIGAAVVETSARENWGVARLFECACER 164          
BLAST of mRNA_P-littoralis_Contig197.96.1 vs. uniprot
Match: A0A7S3NK22_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NK22_9STRA)

HSP 1 Score: 236 bits (601), Expect = 2.540e-75
Identity = 112/177 (63.28%), Postives = 144/177 (81.36%), Query Frame = 0
Query:   12 EFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITATDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKLVLAIACTKTDMESKRVVSRARAEFFATEVGGILCETSAKENWGVNELFARVCDRAMETRGAELRGEAS 188
            EFK+V+LGD+GVGKTCLVLRFIEG +  +QQSTIGAFFLTK+I  ++G  CK+QIWDTAGQERFRAMAP+YYRNAA A+VCFD+ DE +F  MKDWVEEL+TNV +  LV+AIAC K D+++++V SRARAE FA  +  I+ +TSAKEN+GV+ELF  V ++ +  RG EL  +++
Sbjct:   15 EFKIVLLGDRGVGKTCLVLRFIEGLYNSRQQSTIGAFFLTKKIVTSNGDACKIQIWDTAGQERFRAMAPMYYRNAAAAIVCFDVTDESTFNTMKDWVEELKTNVVDKNLVIAIACNKADLDTRQV-SRARAESFARSIDAIILDTSAKENFGVSELFTAVSEQVITLRGHELEAQSN 190          
BLAST of mRNA_P-littoralis_Contig197.96.1 vs. uniprot
Match: A0A7S2BGJ2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BGJ2_9STRA)

HSP 1 Score: 231 bits (590), Expect = 1.640e-73
Identity = 112/162 (69.14%), Postives = 131/162 (80.86%), Query Frame = 0
Query:   22 GVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITATDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKLVLAIACTKTDMESKRVVSRARAEFFATEVGGILCETSAKENWGVNELFARVCDRAMETRGAEL 183
            GVGKTCLVLRFIEG F  KQQSTIGAFFLTK++   DG++CK+QIWDTAGQERFRAMAP+YYRNAA A+VCFDI DE SF  MKDWV+ELR N  +  L+LAIAC K D+ S RVVSR RAE FA+ +  IL +TSAKEN GVNELF +V +R +E++G EL
Sbjct:   17 GVGKTCLVLRFIEGTFTQKQQSTIGAFFLTKKVQLEDGSMCKIQIWDTAGQERFRAMAPMYYRNAAAAIVCFDITDENSFSTMKDWVQELRRNCQDRDLILAIACNKADLSSTRVVSRERAESFASSIKAILMDTSAKENEGVNELFQKVTERVIESQGEEL 178          
BLAST of mRNA_P-littoralis_Contig197.96.1 vs. uniprot
Match: A0A7S3ZPM5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZPM5_9STRA)

HSP 1 Score: 225 bits (573), Expect = 3.820e-71
Identity = 115/179 (64.25%), Postives = 139/179 (77.65%), Query Frame = 0
Query:    6 APKTSVEFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITATDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKLVLAIACTKTDMESKRVVSRARAEFFATEVG-GILCETSAKENWGVNELFARVCDRAMETRGAEL 183
            APK S EFKVV+LGD+GVGKTCLVLRFIEG +  +QQSTIGAFFLTK+I    G  CK+QIWDTAGQERFRAMAP+YYRNAA AVVCFD  D+ +FQ M+ WVEELR NV + KLV+AIA TK+D++  R  +R +AE FA+ +   ++ ETSAK + GV ELFA V +R +E RG EL
Sbjct:   10 APK-SYEFKVVLLGDRGVGKTCLVLRFIEGLYNARQQSTIGAFFLTKKIKTARGDDCKIQIWDTAGQERFRAMAPMYYRNAAAAVVCFDGTDQRTFQTMRTWVEELRANVDDKKLVIAIAITKSDLDENRAETRRKAEEFASSINDALVLETSAKNDVGVRELFATVAERVIELRGEEL 187          
BLAST of mRNA_P-littoralis_Contig197.96.1 vs. uniprot
Match: A0A7R9U6V0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U6V0_9STRA)

HSP 1 Score: 192 bits (488), Expect = 3.790e-58
Identity = 91/169 (53.85%), Postives = 117/169 (69.23%), Query Frame = 0
Query:    9 TSVEFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITATDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKLVLAIACTKTDMESKRVVSRARAEFFATEVGGILCETSAKENWGVNELFARVCDRAME 177
            T  EFKVVV+G+K VGKT LVLRFI+G F P+QQ TIGAFF +K +    G  C +Q+WDTAGQERFRA+ P+YYR A  A+VCFD+  E SF+ M+ WV+ELR N   G +V+AIA TK D+E+ RVV +     +A  +G +  ETSAK N GV +LF  +  R +E
Sbjct:    5 TPQEFKVVVVGEKSVGKTSLVLRFIDGCFQPQQQPTIGAFFFSKHLVLAGGAACVLQVWDTAGQERFRAITPMYYRQAMGAIVCFDVTSEASFETMQGWVKELRENTEPGSIVIAIAATKADLEAARVVDQEGPRLYAASIGALYAETSAKANVGVQDLFVTLGQRMLE 173          
BLAST of mRNA_P-littoralis_Contig197.96.1 vs. uniprot
Match: A0A6S9BP90_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9BP90_9STRA)

HSP 1 Score: 185 bits (470), Expect = 1.560e-54
Identity = 93/174 (53.45%), Postives = 123/174 (70.69%), Query Frame = 0
Query:   12 EFKVVVLGDKGVGKTCLVLRFIEGYF--APKQQSTIGAFFLTKQITATDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKLVLAIACTKTDM----ESKRVVSRARAEFFATEVGGILCETSAKENWGVNELFARVCDRAMETR 179
            EFKVV+LGD   GKT LVLRF EGY+  AP+  ST+GAFF+TK+I  + G  CK+QIWDTAGQ +FRAMAP+YYRNAA A+VC+D+ D +SF  M++W++EL  NVP G +V+AIA TKTD+    ++  +V    A+  A  +G I  +TSAK N  V  LF RV +R ++ R
Sbjct:   10 EFKVVMLGDTNAGKTSLVLRFAEGYYRDAPRS-STVGAFFITKRIQTSSGITCKIQIWDTAGQSQFRAMAPMYYRNAAAAIVCYDVTDPQSFTVMREWLDELHRNVPAGSIVIAIAATKTDLSQTADATTLVPPNEAQDVANALGAIFVDTSAKSNSNVQVLFQRVAERVLQFR 182          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig197.96.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LS40_ECTSI8.070e-15095.13Rab50, RAB family GTPase n=2 Tax=Ectocarpus TaxID=... [more]
A0A7S2XTR6_9STRA4.480e-9577.09Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S3Y4J2_HETAK3.130e-9175.14Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
F0XY01_AURAN8.210e-7963.24Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A835ZBF8_9STRA5.630e-7669.09P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S3NK22_9STRA2.540e-7563.28Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S2BGJ2_9STRA1.640e-7369.14Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S3ZPM5_9STRA3.820e-7164.25Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7R9U6V0_9STRA3.790e-5853.85Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A6S9BP90_9STRA1.560e-5453.45Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 13..34
score: 50.62
coord: 36..52
score: 29.94
coord: 55..77
score: 49.49
coord: 153..175
score: 31.84
coord: 118..131
score: 19.15
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 10..178
e-value: 4.7E-22
score: 89.3
NoneNo IPR availableSMARTSM00176ran_sub_2coord: 18..218
e-value: 0.0011
score: 3.9
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 13..178
e-value: 2.5E-63
score: 226.4
NoneNo IPR availablePANTHERPTHR47977:SF13RAS-RELATED PROTEIN RAB-5Ccoord: 9..177
NoneNo IPR availablePANTHERPTHR47977LD21953P-RELATEDcoord: 9..177
NoneNo IPR availablePROSITEPS51420RHOcoord: 6..181
score: 8.685612
NoneNo IPR availablePROSITEPS51419RABcoord: 8..225
score: 27.773211
NoneNo IPR availableCDDcd00154Rabcoord: 13..168
e-value: 7.30338E-72
score: 214.242
IPR001806Small GTPaseSMARTSM00174rho_sub_3coord: 15..178
e-value: 1.5E-10
score: 15.9
IPR001806Small GTPasePFAMPF00071Rascoord: 14..175
e-value: 1.8E-50
score: 170.7
IPR001806Small GTPasePROSITEPS51421RAScoord: 8..226
score: 15.60764
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 6..188
e-value: 6.3E-57
score: 194.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 9..177
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 12..168
e-value: 7.6E-24
score: 82.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig197contigP-littoralis_Contig197:402176..409659 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig197.96.1mRNA_P-littoralis_Contig197.96.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig197 401921..410096 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig197.96.1 ID=prot_P-littoralis_Contig197.96.1|Name=mRNA_P-littoralis_Contig197.96.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=227bp
MAEHGAPKTSVEFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFL
TKQITATDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEES
FQKMKDWVEELRTNVPEGKLVLAIACTKTDMESKRVVSRARAEFFATEVG
GILCETSAKENWGVNELFARVCDRAMETRGAELRGEASGGGAGAGARKSK
FGLSPAAHAAGFGGDSGGESSGGCCG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR027417P-loop_NTPase
IPR005225Small_GTP-bd_dom