mRNA_P-littoralis_Contig197.62.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig197.62.1
Unique NamemRNA_P-littoralis_Contig197.62.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig197.62.1 vs. uniprot
Match: D8LL02_ECTSI (PH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL02_ECTSI)

HSP 1 Score: 833 bits (2153), Expect = 2.410e-286
Identity = 533/893 (59.69%), Postives = 603/893 (67.53%), Query Frame = 1 
Query:  490 KIRLGDKVMVYLPSGDRAKGTILVESSRDRYEVTLENGTVEKRVHSRNIALTSRRQNRTQNRDXXXXXXXXXXTQHERKQSTGGHRESR-DGPLDRQHSVVTVGSKSDSNTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS--DQAQQSPDAGSQSPSTARAWQ-SPVPTEAHVSESDPDTSAGEQGSS------SERGLSPLSRKVRQAQGLLKTMFLRKGEEQGG---SSSKEGGRSTSRRWSREGSISRRFSKGSGDQG-----SLSAHPL-GDDAEQGERTENIGPPTPTSEHSEDAAR-TQLGAAAFKGNARRLSRDLTRGRSRNRKNGLSGQGLAAAASESPA-SRSPSLATKLGMAVRGAIMGKTELGVHKPHTKQAAGRSPRSD-SDADAASDDTYSTGASETG-DLSRLSRRNSRRRRSAM-DGEEDHGQ-SSDGFEDAIIRQDSPLAATTYTGVGDPRNFPDAVHSYIGVRERMEHEMSATGPAFLPRVDNLAAFSLIEGGSKGWGKPRG-SLDITKQASSTTQRTDQHQPFTEAMFKAGVSETRHSTKQGILLEGDLQKFSPESMRGVRWHKRYFVLYACSCELRYYRTHAEAAWGRIPLGERGSIPLRLVVKIEQPSDKKYRGCRFDLVVLHKGESRHPGLHIRPGQESRVFTTKTFKFNAADAQQRLLWVTVIEALMKKHGWGVNADRCSSMRAPRHGGPGADTGDSLYWGSTWDG-KAEGSELAAS---GLTCNGSNSSAAALGELLSPHTGRYRGMEERVAGGANPATHKGSVLTFVEEEQNDDIKVDVQNLHRXXXXXXXXXXXXXXXHDKKHLTIFPGKTTLVPQ--QRGLRIPYSPGGKRGSLTTDALSPPVP 3072
            KIR GDKV+VYLPSG +AKG + VESSRDRYE+TLENG VEKRVHSRNIAL S+ ++  +NR           ++ + K++T   RESR D P   Q      G + +S TP                                                     D  Q  P A S SP TA   + SP P EA VSES+ +TS GE+GSS       ERG SPLS KVRQAQGLLKTMF RKGEEQGG   SS  EGGRS SRRWSR  S+SRRFS GSGD       +L++ P+ GD+ ++ + T  +  P PTSEHSEDAA  T LGAAA KG+ARRLSR LTRGRS                S SPA SRSPSLATKLGM +RGAIMGKT+LGVH PH       +P ++ SDADA SD TYSTGAS    D SR  RR SR R  A+ DG +DHG  SSDGF+  I RQDSP+AAT Y G  DPRN PDAV+SYIG RE+MEHEMSA+GP FLPRVDNLAA ++ EG    WGK RG SLDITKQASSTTQRT+QHQPFTEAMFKAGVSETRHSTKQGILLEGDLQKFSPESMRGVRWHKRYFVLYAC+CELRYYRTHAEAAWGRIPLGERGSIPLRLVVKIEQPSDKKYRGCRFDLVVLHKGESRHPGLHIRPGQESRV TTKTFKFNAADAQQRLLWVTVIEALMK+HGWG++ADRC SMRAPRHGG  A  GDSL WG+TW G +AEG+E A      L  N   + A A+ E+ SP    +R  +ER   G+     K SV+ FVE+  + D+ +     H+               +D++ L +  G T+  PQ  QRGL IPYSPGGKRGSLTT ALSPP+P
Sbjct:  115 KIRTGDKVVVYLPSGGKAKGVVSVESSRDRYEITLENGEVEKRVHSRNIALASKHRSHRRNRSDQARSSS---SRSQAKKNTRRRRESRADAPGREQSHGDESGLEPESRTPREQRSNSSWVLGATPPSSAEALVGQRKVGEDDQPVSLPSTGPSTVASAASGGGDPIQPPPVAESHSPDTAPTRRTSPPPVEALVSESERETSNGERGSSLDRGSLHERGSSPLSSKVRQAQGLLKTMFWRKGEEQGGGGGSSGTEGGRSASRRWSRGNSLSRRFSGGSGDDPGENVRNLNSVPVSGDETQRKKSTNKLDSPIPTSEHSEDAAASTPLGAAALKGHARRLSRGLTRGRSX-----XXXXXXXXXXSASPATSRSPSLATKLGMTLRGAIMGKTQLGVHNPHAADV--HTPAANLSDADAGSDATYSTGASSAKRDESRRERRASRPRGGALLDGGKDHGGVSSDGFDSDIFRQDSPMAATAYGG--DPRNLPDAVYSYIGAREKMEHEMSASGPVFLPRVDNLAAKTVAEGAVPAWGKLRGGSLDITKQASSTTQRTEQHQPFTEAMFKAGVSETRHSTKQGILLEGDLQKFSPESMRGVRWHKRYFVLYACACELRYYRTHAEAAWGRIPLGERGSIPLRLVVKIEQPSDKKYRGCRFDLVVLHKGESRHPGLHIRPGQESRVRTTKTFKFNAADAQQRLLWVTVIEALMKRHGWGMDADRCRSMRAPRHGGLTAGAGDSLAWGNTWGGGEAEGTEPAVKRHVSLRLNDGLNGAEAVQEVSSPLRADHR-QQERSRKGS-----KSSVMNFVEDRDDGDLNLQQGPHHQQ--------------NDEEMLAMLRGTTSPAPQLQQRGLSIPYSPGGKRGSLTTGALSPPMP 975
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BLAST of mRNA_P-littoralis_Contig197.62.1 vs. uniprot
Match: A0A835ZLL0_9STRA (PH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLL0_9STRA)

HSP 1 Score: 276 bits (706), Expect = 1.950e-74
Identity = 169/426 (39.67%), Postives = 223/426 (52.35%), Query Frame = 1 
Query: 1885 NFPDAVHSYIGVRERMEHEMSATGPAFLPRVDNLAAFSLIEGGSKGWGKPRGSLDITKQASSTTQRTDQHQPFTEAMFKAGVSETRHSTKQGILLEGDLQKFSPESMRGVRWHKRYFVLYACSCELRYYRT---------------------------HAEAAWGRIPLGERGSIPLRLVVKIEQPSDKKYRGCRFDLVVLHKGESRHPGLHIRPGQESRVFTTKTFKFNAADAQQRLLWVTVIEALMKKHGWGVNAD----RCSSMRAPRHGGPGADTGDSLYWGSTWDGKAEGSELAASGLTCNGSNSSAAALGELLSPHTGRYRGMEERVAGGANPATHKGSVLTFVEEEQNDDIKVDVQNLHRXXXXXXXXXXXXXXXHDKKHLTIFPGKTTLVPQQRGLRIPYSPGGKRGSLTTDALSPPV 3069
            + P AV  YI VR  ME  MSATGP  LP+    A+F+         G+  G+L  +K+  S  Q   +  PFTEA+FKAGVSET HSTKQGILLEG LQK+SP S+ G +WH RY VLYA SCELRYYR                              +A+WGRIP+GERGS PLRL+V+IEQPS  K++GCRFDLV  H+G  R+PG+ IRPG E  V +TKT KF A   QQRLLWVTVIE+LMK+HGWG   +    R +           + +  ++Y        + G  L A+G T  G N+      + L    G    +E+  +GG   +    + L+ +  E  +D                          +++H  +            G++IP+SPGG+RGSL T  L+PP+
Sbjct:  607 SLPRAVDDYIDVRVDMERRMSATGPRRLPQPHAFASFAD--------GRRHGTLSYSKELVSGAQTAAESMPFTEALFKAGVSETPHSTKQGILLEGWLQKYSPNSVAGRKWHARYCVLYAGSCELRYYRACQASGWRWFSWCVSVERQGVASETGHHDKDASWGRIPIGERGSTPLRLLVRIEQPSKAKWKGCRFDLVARHRGSGRYPGIQIRPGTERTVLSTKTLKFCAETPQQRLLWVTVIESLMKQHGWGDGPEAPQQRHAQXXXXXXXXXSSRSPSAMY--------STGRSLGATGATAFG-NTMTELPAKWLDDRHGTLSFVEDAASGGDKESADGSAALSDIASEPAED----------------------DNEAERRHAPVHGAVG-------GVKIPFSPGGRRGSLVTQTLTPPI 986
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BLAST of mRNA_P-littoralis_Contig197.62.1 vs. uniprot
Match: A0A7S3UTN7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UTN7_HETAK)

HSP 1 Score: 114 bits (285), Expect = 5.290e-24
Identity = 69/155 (44.52%), Postives = 88/155 (56.77%), Query Frame = 1 
Query: 2152 KQGILLEGDLQKF-SPESMRGVRWHKRYFVLYACSCELRYYRTHAEAAWGRIPLGERGSIPLRLVVKIEQPSDKKYRGCRFDLVVLHKGESRH----------PGLHIRPGQESRVFTT-----------KTFKFNAADAQQRLLWVTVIEALMK 2550
            KQG LLEG L K+ S  ++R   WH+RYFVL A S ELRYY    ++AWG IPL E+ ++PLR V +IE P+D K+ G RFDLV +  G  ++          PG   R G+E                 KTFK  A DA  RLLWVTV++ LM+
Sbjct:  145 KQGALLEGALLKWASGGALRRGGWHERYFVLLARSRELRYYADFTDSAWGSIPLEEKCAVPLRTVERIEVPTDAKWAGRRFDLVCVDWGGGKYAADEDPQPGAPGGGEREGEEGTPXXXXXXXXXXXRAGKTFKLVAPDAATRLLWVTVLQDLMR 299
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BLAST of mRNA_P-littoralis_Contig197.62.1 vs. uniprot
Match: A0A1W0A2G2_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A2G2_9STRA)

HSP 1 Score: 101 bits (251), Expect = 2.670e-18
Identity = 60/158 (37.97%), Postives = 85/158 (53.80%), Query Frame = 1 
Query: 2158 GILLEGDLQKFSPESMRGVR-WHKRYFVLYACSCELRYYRTHAEAAWGRIPLGERGSIPLRLVVKIEQPSDKKYRGCRFDLVVLHKGESRHPGLH------------IRPGQESRVFTT----KTFKFNAADAQQRLLWVTVIEALMKKHGWGVNADR 2580
            G+LLEG L++     +RG++ W+ RYFVLYA   ELRYY    ++ WG IPLGE GSI LRL+ +I +PS  KY+GCRFD+       S  P L               P Q  ++ TT    + +   A   Q  +LWV  +++L+ +    VN+ R
Sbjct:  189 GVLLEGWLRQKQRRGIRGLKKWNSRYFVLYAKVHELRYYSDVVQSGWGPIPLGEIGSISLRLIQRISKPSHPKYKGCRFDI-TCRSSSSGVPDLDDDPLSSDDEAKKASPKQPPKIKTTPKASRVYSLIADSPQTTVLWVNTLDSLLTR---SVNSPR 342
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BLAST of mRNA_P-littoralis_Contig197.62.1 vs. uniprot
Match: A0A5D6YFM8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YFM8_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 1.300e-16
Identity = 47/102 (46.08%), Postives = 65/102 (63.73%), Query Frame = 1 
Query: 2158 GILLEGDLQKFSPESMRGV-RWHKRYFVLYACSCELRYYRTHAEAAWGRIPLGERGSIPLRLVVKIEQPSDKKYRGCRFDLVVLHKGESRHPGLHIRPGQES 2460
            G+LLEG L++     ++G+ RW+ RYFVLYA S E+RYY     +AWG IPLGE GSI LRL+ KI +P   KYRGCRFD+   +   + +   ++    E+
Sbjct:  439 GVLLEGWLRQKQRRGVKGMKRWNARYFVLYAKSNEVRYYADVVPSAWGPIPLGEIGSISLRLIQKISKPGHPKYRGCRFDITCRNSWGTHYADDYVSSDDEN 540
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BLAST of mRNA_P-littoralis_Contig197.62.1 vs. uniprot
Match: K3WY78_GLOUD (PH domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WY78_GLOUD)

HSP 1 Score: 95.1 bits (235), Expect = 2.640e-16
Identity = 49/150 (32.67%), Postives = 83/150 (55.33%), Query Frame = 1 
Query: 2161 ILLEGDLQKFSPESMRGVR-WHKRYFVLYACSCELRYYRTHAEAAWGRIPLGERGSIPLRLVVKIEQPSDKKYRGCRFDLVVLHKGESRHPGLHI------------------RPGQESRVFTTKTFKFNAADAQQRLLWVTVIEALMKK 2553
            ++LEG L++     M+G++ W+ RYFVLYA + E+RYY    ++AWG IPLGE GSI LRL+ +I +PS  KYRGCRFD+   +   + +   ++                  +  + S   +++ +   A   Q  + WV  +++L+++
Sbjct:  484 VVLEGWLRQKQRRGMKGMKKWNTRYFVLYAKTNEVRYYADVVQSAWGPIPLGEIGSISLRLIQRIGKPSHPKYRGCRFDITCRNSWGTHYADDYVSSDXXXXXXXXXXXXXXXKQERSSTPRSSRVYSLMADSPQTTVTWVNTLDSLLRQ 633
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BLAST of mRNA_P-littoralis_Contig197.62.1 vs. uniprot
Match: A0A8K1C7U9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C7U9_PYTOL)

HSP 1 Score: 94.4 bits (233), Expect = 5.930e-16
Identity = 44/104 (42.31%), Postives = 67/104 (64.42%), Query Frame = 1 
Query: 2158 GILLEGDLQKFSPESMRGVR-WHKRYFVLYACSCELRYYRTHAEAAWGRIPLGERGSIPLRLVVKIEQPSDKKYRGCRFDLVVLHKGESRHPGLHIRPGQESRV 2466
            G+LLEG L++     ++G++ W+ RYFVLYA + E+RYY    ++AWG IPLGE GSI LRL+ +I +PS  KY+GCRFD+   +   + +   ++    E+  
Sbjct:  348 GVLLEGWLRQKQRRGVKGMKKWNSRYFVLYAKTNEIRYYADVVQSAWGPIPLGEIGSISLRLIQRIGKPSHPKYKGCRFDITCRNTWGTHYADDYVSSEDENHT 451
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BLAST of mRNA_P-littoralis_Contig197.62.1 vs. uniprot
Match: A0A0W8DTJ9_PHYNI (PH domain-containing protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DTJ9_PHYNI)

HSP 1 Score: 92.4 bits (228), Expect = 1.630e-15
Identity = 44/102 (43.14%), Postives = 67/102 (65.69%), Query Frame = 1 
Query: 2158 GILLEGDLQKFSPESMRGVR-WHKRYFVLYACSCELRYYRTHAEAAWGRIPLGERGSIPLRLVVKIEQPSDKKYRGCRFDLVVLHKGESRHPGLHIRPGQES 2460
            G+LLEG L++     ++G++ W+ RYFVLYA S E+RYY    ++AWG IPLGE GSI LRL+ +I + S  KY+GCRFD+   +   + +   ++   +E+
Sbjct:  374 GVLLEGWLRQKQRRGIKGLKKWNSRYFVLYARSNEVRYYADVVQSAWGPIPLGEIGSISLRLIQRIGKLSHPKYKGCRFDITCRNSWGTHYADDYVSSDEEN 475
[Close]
BLAST of mRNA_P-littoralis_Contig197.62.1 vs. uniprot
Match: D0N1K1_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0N1K1_PHYIT)

HSP 1 Score: 92.8 bits (229), Expect = 1.670e-15
Identity = 55/178 (30.90%), Postives = 89/178 (50.00%), Query Frame = 1 
Query: 2158 GILLEGDLQKFSPESMRGVR-WHKRYFVLYACSCELRYYRTHAEAAWGRIPLGERGSIPLRLVVKIEQPSDKKYRGCRFDLVVLHKGESRHPGLHIR-------------------------PGQESRVFTTKT---FKFNAADAQQRLLWVTVIEALMKKHGWGVNADRCSSMRAPR 2604
            G+LLEG L++     ++G++ W+ RYFVLYA S E+RYY    ++AWG IPLGE GSI LRL+ +I + S  KY+GCRFD+   +   + +   ++                          P ++ +  T K+   +   A   Q  + WV ++++L+ +       D  S +  PR
Sbjct:  308 GVLLEGWLRQKQRRGIKGLKKWNSRYFVLYARSNEVRYYADVVQSAWGPIPLGEIGSISLRLIQRIGKLSHPKYKGCRFDITCRNSWGTHYADDYVSSDEENANSNNNVSXXXXXXXATASTPAKQEKSGTPKSSRVYSLVADSPQVTVAWVNMLDSLLTRSANSPRPDVDSPVENPR 485
[Close]
BLAST of mRNA_P-littoralis_Contig197.62.1 vs. uniprot
Match: W2QA92_PHYPN (Uncharacterized protein n=9 Tax=Phytophthora TaxID=4783 RepID=W2QA92_PHYPN)

HSP 1 Score: 92.4 bits (228), Expect = 2.410e-15
Identity = 44/102 (43.14%), Postives = 67/102 (65.69%), Query Frame = 1 
Query: 2158 GILLEGDLQKFSPESMRGVR-WHKRYFVLYACSCELRYYRTHAEAAWGRIPLGERGSIPLRLVVKIEQPSDKKYRGCRFDLVVLHKGESRHPGLHIRPGQES 2460
            G+LLEG L++     ++G++ W+ RYFVLYA S E+RYY    ++AWG IPLGE GSI LRL+ +I + S  KY+GCRFD+   +   + +   ++   +E+
Sbjct:  374 GVLLEGWLRQKQRRGIKGLKKWNSRYFVLYARSNEVRYYADVVQSAWGPIPLGEIGSISLRLIQRIGKLSHPKYKGCRFDITCRNSWGTHYADDYVSSDEEN 475
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig197.62.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
D8LL02_ECTSI2.410e-28659.69PH domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
A0A835ZLL0_9STRA1.950e-7439.67PH domain-containing protein n=1 Tax=Tribonema min... [more]
A0A7S3UTN7_HETAK5.290e-2444.52Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A1W0A2G2_9STRA2.670e-1837.97Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A5D6YFM8_9STRA1.300e-1646.08Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
K3WY78_GLOUD2.640e-1632.67PH domain-containing protein n=1 Tax=Globisporangi... [more]
A0A8K1C7U9_PYTOL5.930e-1642.31Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A0W8DTJ9_PHYNI1.630e-1543.14PH domain-containing protein n=1 Tax=Phytophthora ... [more]
D0N1K1_PHYIT1.670e-1530.90Uncharacterized protein n=2 Tax=Phytophthora infes... [more]
W2QA92_PHYPN2.410e-1543.14Uncharacterized protein n=9 Tax=Phytophthora TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig197contigP-littoralis_Contig197:242462..246944 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LL02
PFAMsPH
Model size3118
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons4
Evalue3.02e-287
EggNOG OGs2CZ8I@1|root,2S929@2759|Eukaryota
Ec32 ortholog descriptionPleckstrin homology-like domain
Ec32 orthologEc-11_006220.1
Cds size3093
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789945.860329-CDS-P-littoralis_Contig197:242461..2426161680789945.860329-CDS-P-littoralis_Contig197:242461..242616Pylaiella littoralis U1_48CDSP-littoralis_Contig197 242462..242616 +
1680789945.8724277-CDS-P-littoralis_Contig197:242993..2440111680789945.8724277-CDS-P-littoralis_Contig197:242993..244011Pylaiella littoralis U1_48CDSP-littoralis_Contig197 242994..244011 +
1680789945.88241-CDS-P-littoralis_Contig197:244180..2457691680789945.88241-CDS-P-littoralis_Contig197:244180..245769Pylaiella littoralis U1_48CDSP-littoralis_Contig197 244181..245769 +
1680789945.8924787-CDS-P-littoralis_Contig197:246588..2469191680789945.8924787-CDS-P-littoralis_Contig197:246588..246919Pylaiella littoralis U1_48CDSP-littoralis_Contig197 246589..246919 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789945.9005506-UTR-P-littoralis_Contig197:246919..2469441680789945.9005506-UTR-P-littoralis_Contig197:246919..246944Pylaiella littoralis U1_48UTRP-littoralis_Contig197 246920..246944 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig197.62.1prot_P-littoralis_Contig197.62.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig197 242462..246919 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig197.62.1

>prot_P-littoralis_Contig197.62.1 ID=prot_P-littoralis_Contig197.62.1|Name=mRNA_P-littoralis_Contig197.62.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1031bp
MARSKSRHHDSRDGGSSSVVMVSQRPSGTETQNQRKKTRDKKKKAPIAGR
MWDSFESESASGEEEDGDHDTKMPTSPAQSRASSSSSSSSSKSTTSTTTA
NKRHRHARSHPLESATKEGQVARKTVRKGQMGRSNGSNDRSARGDSGSQS
AGSNTLKKKDAKTKIRLGDKVMVYLPSGDRAKGTILVESSRDRYEVTLEN
GTVEKRVHSRNIALTSRRQNRTQNRDDRRRRSSSSRTQHERKQSTGGHRE
SRDGPLDRQHSVVTVGSKSDSNTPPRRPPPSGAVGSPHSSSAEPPPSEHT
AGEERPVVQSSPGPSTAASAASGGSDQAQQSPDAGSQSPSTARAWQSPVP
TEAHVSESDPDTSAGEQGSSSERGLSPLSRKVRQAQGLLKTMFLRKGEEQ
GGSSSKEGGRSTSRRWSREGSISRRFSKGSGDQGSLSAHPLGDDAEQGER
TENIGPPTPTSEHSEDAARTQLGAAAFKGNARRLSRDLTRGRSRNRKNGL
SGQGLAAAASESPASRSPSLATKLGMAVRGAIMGKTELGVHKPHTKQAAG
RSPRSDSDADAASDDTYSTGASETGDLSRLSRRNSRRRRSAMDGEEDHGQ
SSDGFEDAIIRQDSPLAATTYTGVGDPRNFPDAVHSYIGVRERMEHEMSA
TGPAFLPRVDNLAAFSLIEGGSKGWGKPRGSLDITKQASSTTQRTDQHQP
FTEAMFKAGVSETRHSTKQGILLEGDLQKFSPESMRGVRWHKRYFVLYAC
SCELRYYRTHAEAAWGRIPLGERGSIPLRLVVKIEQPSDKKYRGCRFDLV
VLHKGESRHPGLHIRPGQESRVFTTKTFKFNAADAQQRLLWVTVIEALMK
KHGWGVNADRCSSMRAPRHGGPGADTGDSLYWGSTWDGKAEGSELAASGL
TCNGSNSSAAALGELLSPHTGRYRGMEERVAGGANPATHKGSVLTFVEEE
QNDDIKVDVQNLHRRRHHHHHQQQQQQQQHDKKHLTIFPGKTTLVPQQRG
LRIPYSPGGKRGSLTTDALSPPVPTDVRRG*
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mRNA from alignment at P-littoralis_Contig197:242462..246944+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig197.62.1 ID=mRNA_P-littoralis_Contig197.62.1|Name=mRNA_P-littoralis_Contig197.62.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4483bp|location=Sequence derived from alignment at P-littoralis_Contig197:242462..246944+ (Pylaiella littoralis U1_48)
ATGGCGCGTTCAAAGAGTCGCCACCACGATTCGAGGGACGGAGGCAGTAG
CAGCGTTGTCATGGTGTCTCAACGGCCGTCGGGGACAGAGACGCAGAATC
AGCGGAAGAAGACACGTGATAAAAAGAAGAAGGCTCCCATTGCGGGAAGG
ATGTGGTGAGGGCAGTGTAAAATTGTATAGCCAGCAGACGAAAGCGACCA
TCACAACGTCCTATCATACGTCGTTGCCGACGTGTAGCTGGTTGGATGCA
TGAGTCTTTGTCGTGCGTGTGTATTATAGTCTATGGTACTTCGGAGTACC
ATTTACTGCTCAGCTGTATCAGGGGTGGCAATTTTCCAACCGGATACAAT
TGGTGGTACGTATGTACGCACAACAGCTTGTGACGTTTGCGAGCAGTTGC
CGAGGAAGTTCTCTAGGAGTTCTACAAGCATGCACACAACAGAAGTTTGG
CAAATTATACCGATTGCCTTTGCTACTGCTGATGCTGTGCCCTCTCCCGT
TTTACGTGGTGGGCGGCTCACATATACTACAGGGATAGCTTCGAGTCGGA
ATCGGCTTCAGGTGAGGAAGAAGACGGAGATCATGATACAAAAATGCCAA
CATCTCCAGCGCAAAGTAGGGCCAGCAGCAGCAGCAGCAGCAGCAGCAGC
AAATCTACCACTTCGACGACGACGGCGAACAAACGACATAGACACGCTCG
AAGCCACCCACTCGAGTCAGCTACCAAGGAGGGTCAGGTCGCGAGAAAGA
CAGTACGGAAAGGACAGATGGGCAGATCTAACGGCAGTAATGACCGCAGC
GCTCGCGGCGATAGCGGTAGCCAAAGTGCTGGGTCTAACACCCTCAAGAA
GAAAGATGCGAAGACGAAGATCAGATTAGGAGACAAAGTCATGGTGTACC
TGCCGTCAGGGGATAGGGCCAAAGGCACAATTTTAGTCGAATCCTCTCGA
GACAGGTACGAGGTCACTCTTGAGAACGGCACCGTGGAGAAACGTGTTCA
CTCCAGAAATATAGCTCTCACTTCGCGCCGCCAAAATCGTACTCAAAATC
GAGACGATCGTAGAAGAAGAAGCTCGAGCAGCCGAACTCAGCATGAGCGA
AAACAGAGCACAGGAGGACATCGGGAGTCCCGAGATGGGCCCTTAGACCG
TCAACACAGTGTTGTTACAGTAGGATCGAAATCAGATTCGAACACTCCAC
CACGCCGTCCACCCCCTTCAGGCGCTGTCGGCTCTCCGCACTCTTCCTCG
GCCGAACCTCCACCGTCAGAACATACAGCGGGGGAAGAAAGACCTGTGGT
TCAATCATCTCCAGGGCCCTCGACAGCAGCGTCTGCTGCCAGTGGTGGAT
CTGACCAAGCTCAACAATCCCCCGACGCGGGAAGCCAATCTCCGAGTACC
GCACGAGCTTGGCAGTCCCCGGTACCCACCGAAGCCCACGTCAGTGAATC
GGACCCTGACACAAGCGCCGGAGAGCAAGGATCATCCTCTGAACGGGGAT
TGTCACCTCTATCGAGAAAAGTCCGGCAGGCCCAGGGACTTCTGAAGACG
GTGAGACCAAGGTAGGGATATTCTTGTTGATTCTTGCTGTCTACGTACCG
TACATTAGCGCGGCCACTGCCCCTTCTCTTTTTGCTATTTTACAAACGTA
TATCGTGGCGTCTTCGTGTGAACCTTTGGCAGTCATATTTTGATCCTCGT
GAGTGACTGATTATCACAGATGTTCTTGAGGAAAGGGGAGGAACAAGGCG
GCAGCAGCAGTAAAGAGGGCGGGCGCAGCACCAGCCGAAGGTGGTCTCGA
GAGGGCTCTATATCCCGTAGGTTTTCGAAAGGTTCCGGCGATCAGGGATC
GCTTTCTGCACACCCCTTAGGTGACGATGCTGAACAAGGAGAACGTACAG
AAAATATTGGTCCACCGACGCCAACGTCTGAACACAGCGAAGATGCAGCG
AGAACACAATTGGGTGCGGCTGCCTTCAAGGGAAACGCTCGGCGACTCAG
CCGAGACCTGACGCGTGGTAGATCGAGGAATCGTAAGAACGGGTTGTCGG
GACAAGGTCTCGCAGCAGCAGCCTCCGAGTCTCCCGCTTCACGCTCTCCT
AGTCTGGCCACAAAACTAGGGATGGCCGTTCGCGGAGCAATCATGGGCAA
GACGGAGCTCGGAGTGCACAAACCTCACACCAAGCAGGCAGCAGGTCGTT
CTCCACGCTCCGATTCGGATGCGGACGCTGCGAGCGATGACACATACTCA
ACAGGCGCCAGCGAGACGGGAGATTTGTCTCGGCTAAGTCGTCGAAACAG
TAGACGGCGGCGCAGCGCAATGGACGGCGAAGAAGACCACGGCCAATCCA
GTGACGGGTTCGAAGACGCCATAATTCGCCAGGACAGCCCCTTAGCCGCG
ACCACTTACACCGGTGTTGGCGACCCGAGAAATTTTCCGGATGCCGTGCA
CTCGTATATTGGCGTGCGGGAGCGAATGGAGCACGAGATGAGCGCCACGG
GCCCCGCTTTTCTCCCACGCGTAGATAACCTAGCGGCGTTTAGCCTGATT
GAGGGGGGATCCAAAGGTTGGGGAAAGCCGCGGGGCTCTCTGGACATCAC
CAAGCAGGCCTCGTCTACAACGCAGCGAACGGATCAGCACCAACCCTTCA
CCGAGGCGATGTTTAAGGCAGGAGTTTCGGAGACTAGACACTCTACGAAG
CAGGGAATTTTGCTCGAGGGTGACCTTCAGAAATTCAGCCCGGAATCAAT
GCGCGGAGTTCGATGGCACAAGCGGTACTTCGTGCTCTACGCGTGCTCGT
GCGAGCTGCGCTACTATCGGACTCACGCCGAGGCTGCGTGGGGTCGAATA
CCGTTGGGGGAGAGGGGGTCTATTCCTCTCCGGCTGGTGGTGAAGATCGA
GCAGCCATCAGACAAAAAGTACCGGGGGTGCCGCTTCGACCTCGTCGTGC
TTCACAAGGGAGAAAGCCGTCACCCGGGGCTCCACATCCGTCCCGGGCAA
GAGTCGAGGGTGTTCACCACCAAGACATTCAAGTTTAATGCCGCCGATGC
GCAGCAACGCCTGCTGTGGGTCACCGTCATCGAGGCGCTCATGAAAAAGC
ACGGCTGGGGGGTGAACGCCGATCGCTGCAGCAGCATGCGGGCGCCAAGG
CACGGAGGCCCGGGCGCCGACACCGGTGATTCGCTCTACTGGGGTAGCAC
ATGGGATGGGAAGGCTGAAGGCTCTGAGCTTGCTGCATCGGGTCTAACGT
GCAACGGCAGCAACAGCAGTGCCGCAGCCCTGGGCGAGCTTCTTTCTCCG
CACACCGGGTGCGTGGTTGATTTGTATTTTGCACAATATAAGAAGAAGAA
CGTATCCCCTGCGTAGCGCAGTAATGTGGGGGCGTGAATTTGTTAAATTT
ACCGAAGTACGCCACGCAGCTACAGTGTAGGACATGCTTCAGTAGCCGGC
GCGTGTTTTTTTAGCTTCATACCCTAAAAGTAGGGCCTCGACATTCCGTA
TCGTGGGCCCAGGGCTTTTGAGACAAAAATAGAAACATGAATATCCTGCA
AACATCGTAGGCAAGCTTCATTTGCTGCCAACCATGACATATTATACGAT
CATGCCAACGGTTTGCCGGCACCGTCCTTACATTGTGTTACAAGCACCTG
CTAGTCACAGTAGAAAGTTGAACGGTATGATATGGTCTTGGCTATCCTGG
AAGCTATCGTGGACCAAAATACAGGGACGTTGCCGGCAAACCGTTGGCAG
GATCGTTAAACCTGCCGTTGGCAACATGAACCCTCATTCATTTGCAGATT
GATCATGGTTTGACAACGATAGATCGTGAAGTTTATGTCGGAAAAAATCA
GCGTTGTTCAGACAGGGCGAACCGCGCTATATACATTTATCGTTTATATA
TTAGGAAGCTCAACAGTCCTTACTGGTGGTATGACCGATTCAGGCCATGT
CTGCTTCTCGAAACTTAAGTATTTCGAAAAATTTATCGAATAAATATCCC
CCAGCTCTGCGCGCCTCCCCAACGCCCCGCCTCCGATAATAATACCTGCA
ACATTACTGGGGTGGTGTGCTACAGCATGCGCACGTTATTCAAAATTGAA
TGCCTCGTGGACTGACGTTATCCGTAGCAGATATCGAGGTATGGAGGAGC
GGGTAGCAGGGGGAGCAAATCCGGCAACTCATAAGGGTTCTGTGCTGACT
TTCGTCGAGGAGGAGCAGAATGATGACATCAAGGTTGACGTTCAGAATCT
TCATCGTCGTCGTCATCATCATCATCATCAGCAGCAGCAGCAGCAGCAAC
AGCACGATAAAAAACACCTCACCATATTCCCGGGGAAGACTACGCTTGTC
CCGCAGCAGAGAGGCCTCCGCATCCCATACAGTCCGGGGGGGAAGAGGGG
TAGTCTCACCACCGACGCTCTGTCTCCTCCAGTCCCCACGGACGTACGGA
GGGGCTAGACGACAAAGCTCGCTAAACTCGGAT
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Coding sequence (CDS) from alignment at P-littoralis_Contig197:242462..246944+

>mRNA_P-littoralis_Contig197.62.1 ID=mRNA_P-littoralis_Contig197.62.1|Name=mRNA_P-littoralis_Contig197.62.1|organism=Pylaiella littoralis U1_48|type=CDS|length=3093bp|location=Sequence derived from alignment at P-littoralis_Contig197:242462..246944+ (Pylaiella littoralis U1_48)
ATGGCGCGTTCAAAGAGTCGCCACCACGATTCGAGGGACGGAGGCAGTAG
CAGCGTTGTCATGGTGTCTCAACGGCCGTCGGGGACAGAGACGCAGAATC
AGCGGAAGAAGACACGTGATAAAAAGAAGAAGGCTCCCATTGCGGGAAGG
ATGTGGGATAGCTTCGAGTCGGAATCGGCTTCAGGTGAGGAAGAAGACGG
AGATCATGATACAAAAATGCCAACATCTCCAGCGCAAAGTAGGGCCAGCA
GCAGCAGCAGCAGCAGCAGCAGCAAATCTACCACTTCGACGACGACGGCG
AACAAACGACATAGACACGCTCGAAGCCACCCACTCGAGTCAGCTACCAA
GGAGGGTCAGGTCGCGAGAAAGACAGTACGGAAAGGACAGATGGGCAGAT
CTAACGGCAGTAATGACCGCAGCGCTCGCGGCGATAGCGGTAGCCAAAGT
GCTGGGTCTAACACCCTCAAGAAGAAAGATGCGAAGACGAAGATCAGATT
AGGAGACAAAGTCATGGTGTACCTGCCGTCAGGGGATAGGGCCAAAGGCA
CAATTTTAGTCGAATCCTCTCGAGACAGGTACGAGGTCACTCTTGAGAAC
GGCACCGTGGAGAAACGTGTTCACTCCAGAAATATAGCTCTCACTTCGCG
CCGCCAAAATCGTACTCAAAATCGAGACGATCGTAGAAGAAGAAGCTCGA
GCAGCCGAACTCAGCATGAGCGAAAACAGAGCACAGGAGGACATCGGGAG
TCCCGAGATGGGCCCTTAGACCGTCAACACAGTGTTGTTACAGTAGGATC
GAAATCAGATTCGAACACTCCACCACGCCGTCCACCCCCTTCAGGCGCTG
TCGGCTCTCCGCACTCTTCCTCGGCCGAACCTCCACCGTCAGAACATACA
GCGGGGGAAGAAAGACCTGTGGTTCAATCATCTCCAGGGCCCTCGACAGC
AGCGTCTGCTGCCAGTGGTGGATCTGACCAAGCTCAACAATCCCCCGACG
CGGGAAGCCAATCTCCGAGTACCGCACGAGCTTGGCAGTCCCCGGTACCC
ACCGAAGCCCACGTCAGTGAATCGGACCCTGACACAAGCGCCGGAGAGCA
AGGATCATCCTCTGAACGGGGATTGTCACCTCTATCGAGAAAAGTCCGGC
AGGCCCAGGGACTTCTGAAGACGATGTTCTTGAGGAAAGGGGAGGAACAA
GGCGGCAGCAGCAGTAAAGAGGGCGGGCGCAGCACCAGCCGAAGGTGGTC
TCGAGAGGGCTCTATATCCCGTAGGTTTTCGAAAGGTTCCGGCGATCAGG
GATCGCTTTCTGCACACCCCTTAGGTGACGATGCTGAACAAGGAGAACGT
ACAGAAAATATTGGTCCACCGACGCCAACGTCTGAACACAGCGAAGATGC
AGCGAGAACACAATTGGGTGCGGCTGCCTTCAAGGGAAACGCTCGGCGAC
TCAGCCGAGACCTGACGCGTGGTAGATCGAGGAATCGTAAGAACGGGTTG
TCGGGACAAGGTCTCGCAGCAGCAGCCTCCGAGTCTCCCGCTTCACGCTC
TCCTAGTCTGGCCACAAAACTAGGGATGGCCGTTCGCGGAGCAATCATGG
GCAAGACGGAGCTCGGAGTGCACAAACCTCACACCAAGCAGGCAGCAGGT
CGTTCTCCACGCTCCGATTCGGATGCGGACGCTGCGAGCGATGACACATA
CTCAACAGGCGCCAGCGAGACGGGAGATTTGTCTCGGCTAAGTCGTCGAA
ACAGTAGACGGCGGCGCAGCGCAATGGACGGCGAAGAAGACCACGGCCAA
TCCAGTGACGGGTTCGAAGACGCCATAATTCGCCAGGACAGCCCCTTAGC
CGCGACCACTTACACCGGTGTTGGCGACCCGAGAAATTTTCCGGATGCCG
TGCACTCGTATATTGGCGTGCGGGAGCGAATGGAGCACGAGATGAGCGCC
ACGGGCCCCGCTTTTCTCCCACGCGTAGATAACCTAGCGGCGTTTAGCCT
GATTGAGGGGGGATCCAAAGGTTGGGGAAAGCCGCGGGGCTCTCTGGACA
TCACCAAGCAGGCCTCGTCTACAACGCAGCGAACGGATCAGCACCAACCC
TTCACCGAGGCGATGTTTAAGGCAGGAGTTTCGGAGACTAGACACTCTAC
GAAGCAGGGAATTTTGCTCGAGGGTGACCTTCAGAAATTCAGCCCGGAAT
CAATGCGCGGAGTTCGATGGCACAAGCGGTACTTCGTGCTCTACGCGTGC
TCGTGCGAGCTGCGCTACTATCGGACTCACGCCGAGGCTGCGTGGGGTCG
AATACCGTTGGGGGAGAGGGGGTCTATTCCTCTCCGGCTGGTGGTGAAGA
TCGAGCAGCCATCAGACAAAAAGTACCGGGGGTGCCGCTTCGACCTCGTC
GTGCTTCACAAGGGAGAAAGCCGTCACCCGGGGCTCCACATCCGTCCCGG
GCAAGAGTCGAGGGTGTTCACCACCAAGACATTCAAGTTTAATGCCGCCG
ATGCGCAGCAACGCCTGCTGTGGGTCACCGTCATCGAGGCGCTCATGAAA
AAGCACGGCTGGGGGGTGAACGCCGATCGCTGCAGCAGCATGCGGGCGCC
AAGGCACGGAGGCCCGGGCGCCGACACCGGTGATTCGCTCTACTGGGGTA
GCACATGGGATGGGAAGGCTGAAGGCTCTGAGCTTGCTGCATCGGGTCTA
ACGTGCAACGGCAGCAACAGCAGTGCCGCAGCCCTGGGCGAGCTTCTTTC
TCCGCACACCGGCAGATATCGAGGTATGGAGGAGCGGGTAGCAGGGGGAG
CAAATCCGGCAACTCATAAGGGTTCTGTGCTGACTTTCGTCGAGGAGGAG
CAGAATGATGACATCAAGGTTGACGTTCAGAATCTTCATCGTCGTCGTCA
TCATCATCATCATCAGCAGCAGCAGCAGCAGCAACAGCACGATAAAAAAC
ACCTCACCATATTCCCGGGGAAGACTACGCTTGTCCCGCAGCAGAGAGGC
CTCCGCATCCCATACAGTCCGGGGGGGAAGAGGGGTAGTCTCACCACCGA
CGCTCTGTCTCCTCCAGTCCCCACGGACGTACGGAGGGGCTAG
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