prot_P-littoralis_Contig197.39.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig197.39.3
Unique Nameprot_P-littoralis_Contig197.39.3
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length248
Homology
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BLAST of mRNA_P-littoralis_Contig197.39.3 vs. uniprot
Match: D8LKY5_ECTSI (PRA1 family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKY5_ECTSI)

HSP 1 Score: 311 bits (798), Expect = 1.220e-104
Identity = 180/247 (72.87%), Postives = 192/247 (77.73%), Query Frame = 0 
Query:    1 MADGKELKDELAVLGQHMQRFFVADRRPWAEFFGPMEQPTWTQAEVKKRMSANFSFFTTNYLMICATCSAVYILRSPGLLLTLLVSLCMFLYVFMSRRKTVVILDVTLDTRAKTIVAAAASLLLLSVTGYIFALQFSGILGCAVCLLHATFRPPVARAVRNQRGGGGGAPELHGGDGDLEGGGATIGRGRPGPVNANMRLRTRPVPGGPMGGMSTTPXXXXXAGAGFRDSAPPMVDPGSAGRHSHLT 247
            MA+  ELKDEL VLGQHM RFFVADRRPWAEFFGP+EQP WTQAEVKKR++AN SFF TNYLMI AT +AVYILRSPGLLLTLL SLCMFLYVFMSRRK +V+LDVTL TR KTI AA AS+LLLSVTGYIF+LQFSGILGCAVCLLHATFRPPVARAVRN RGGG   PELHGGDGDLEGG                             GM+TT XXXXX    FR+SAPPMVDP +AGRHSH T
Sbjct:    1 MAEASELKDELTVLGQHMHRFFVADRRPWAEFFGPVEQPKWTQAEVKKRVNANLSFFATNYLMIWATIAAVYILRSPGLLLTLLASLCMFLYVFMSRRKKLVVLDVTLGTREKTIAAAVASMLLLSVTGYIFSLQFSGILGCAVCLLHATFRPPVARAVRNTRGGG--PPELHGGDGDLEGGXXXXXX----XXXXXXXXXXXXXXXXXGAGMATTXXXXXXXX--FRESAPPMVDPSNAGRHSHAT 239
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig197.39.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LKY5_ECTSI1.220e-10472.87PRA1 family protein n=1 Tax=Ectocarpus siliculosus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004895Prenylated rab acceptor PRA1PFAMPF03208PRA1coord: 24..155
e-value: 3.5E-25
score: 88.3
IPR004895Prenylated rab acceptor PRA1PANTHERPTHR19317PRENYLATED RAB ACCEPTOR 1-RELATEDcoord: 16..154
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 162..247

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig197contigP-littoralis_Contig197:179757..183495 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig197.39.3mRNA_P-littoralis_Contig197.39.3Pylaiella littoralis U1_48mRNAP-littoralis_Contig197 178284..183776 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig197.39.3 ID=prot_P-littoralis_Contig197.39.3|Name=mRNA_P-littoralis_Contig197.39.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=248bp
MADGKELKDELAVLGQHMQRFFVADRRPWAEFFGPMEQPTWTQAEVKKRM
SANFSFFTTNYLMICATCSAVYILRSPGLLLTLLVSLCMFLYVFMSRRKT
VVILDVTLDTRAKTIVAAAASLLLLSVTGYIFALQFSGILGCAVCLLHAT
FRPPVARAVRNQRGGGGGAPELHGGDGDLEGGGATIGRGRPGPVNANMRL
RTRPVPGGPMGGMSTTPPPGGGAGAGFRDSAPPMVDPGSAGRHSHLT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004895Prenylated_rab_accept_PRA1