mRNA_P-littoralis_Contig197.1.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig197.1.1 vs. uniprot
Match: A0A6H5LM28_9PHAE (tRNA_edit domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LM28_9PHAE) HSP 1 Score: 363 bits (932), Expect = 1.760e-119 Identity = 182/219 (83.11%), Postives = 195/219 (89.04%), Query Frame = 1
Query: 1 QLIATRAAAIEKRLRGEPADLTDPIERVKEHCHRVGATSVRYKWVPPNYYDTPLEERARELGSDPQQLCKTMIMENKAFDENDPTMERFYLVVVQYAARLSSQKISAEVARLKPAGGERLSRGRCNLQVADEEVGLSLSGFPHNGVTVFGGLTPMPIILSEAVLSLRPSFVWMGAGHPLLKLGVSSTDLVSKLGAIVADISIPRDGSAPAGGEDSGAFD 657
QLIA RA AIE+RLRGEP DLTDPIERVKEHCHR GATSVRYKWVP YYDTPLEERA+ELGS+P+QLCKTMIMENKAFDENDPTMERFYLVVVQYAARLSSQKISA V R+ +R SRGRCNLQVA EEVGLSLSGFPHNGVTVFGGLTP+P+ILSEAVL+LRPSFVW+GAGHPLLKLGVS+ DLV KLGA VADIS+PRDG P ED GA+D
Sbjct: 16 QLIARRAVAIERRLRGEPPDLTDPIERVKEHCHRAGATSVRYKWVPHGYYDTPLEERAKELGSEPEQLCKTMIMENKAFDENDPTMERFYLVVVQYAARLSSQKISAAVMRMM----KRSSRGRCNLQVAPEEVGLSLSGFPHNGVTVFGGLTPIPVILSEAVLALRPSFVWLGAGHPLLKLGVSTEDLVKKLGATVADISVPRDG--PGAAEDEGAYD 228
BLAST of mRNA_P-littoralis_Contig197.1.1 vs. uniprot
Match: A0A836CLD2_9STRA (YbaK/aminoacyl-tRNA synthetase-associated domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLD2_9STRA) HSP 1 Score: 155 bits (393), Expect = 4.480e-40 Identity = 90/208 (43.27%), Postives = 124/208 (59.62%), Query Frame = 1
Query: 1 QLIATRAAAIEKRLRGEPADLTDPIERVKEHCHRVGATSVRYKWVPPNYYDTPLEERARELGSDPQQLCKTMIMENKAFDE---NDPTMERFYLVVVQYAARLSSQKISAEVARLKPAGGERLSRGRCNLQVADEEVGLSLSGFPHNGVTVFGGLTPMPIILSEAVLSLRPSFVWMGAGHPLLKLGVSSTDLVSKLGAIVADISIPRD 615
Q + R A I + +G+ A LTDP+ERVK + S R+KWV P YYD LEERA L P+QL K+++ + A E + + +V+VQY A+++ K+ EV AG R + R + +A +E GL+L+GFPHNGV+ FG L +P++LS A+ L F+WMG GH LK+GVS DLV L A VAD+S PRD
Sbjct: 19 QDLEARVATILRAQQGDKAALTDPVERVKAEAQK--CLSARFKWVEPTYYDKSLEERATILRCHPRQLTKSLLFKGNAGSEAADSSGAAPVYMMVIVQYLAKINL-KLLQEVGNALLAG--RQGQKRLSFALAPDEEGLALTGFPHNGVSPFGSLCRVPMVLSSAIAELPEQFLWMGGGHTDLKIGVSVQDLVRALNAHVADVSEPRD 221
BLAST of mRNA_P-littoralis_Contig197.1.1 vs. uniprot
Match: A0A7S1CY74_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CY74_CYCTE) HSP 1 Score: 151 bits (382), Expect = 1.410e-38 Identity = 84/182 (46.15%), Postives = 116/182 (63.74%), Query Frame = 1
Query: 85 KEHCHRVGATSVRYKWVPPNYYDTPLEERARELGS-DPQQLCKTMIMENKAFDEN--DPTMERFYLVVVQYAARLSSQKISAEVARLKPAGGERLSRGRCNLQVADEEVGLSLSGFPHNGVTVFGGLTPMPIILSEAVLSLRPSFVWMGAGHPLLKLGVSSTDLVSKLGAIVADISIPRDGS 621
++HC S ++KWVP NYYD P+ ERA+ LG+ LCK++++ENK + DPT ++ LVV+QY A L QK++ + L+P ERL+ + + +VA E SL+G+ HN VT +G L +PI+LSEAV+ L F WMG GH LKLG+S T+ + AIVADIS PRDGS
Sbjct: 40 EKHCF-----SAQWKWVPTNYYDRPMAERAKVLGAASTLPLCKSLVLENKQAPSSNEDPTNPKYILVVIQYEATLDVQKLANAIRALRPVK-ERLNYNQFDFRVATTEDNDSLTGYAHNSVTPYGLLKDIPIVLSEAVVPLH--FFWMGGGHVRLKLGISVTEFIKSTNAIVADISQPRDGS 213
BLAST of mRNA_P-littoralis_Contig197.1.1 vs. uniprot
Match: F0YER7_AURAN (tRNA_edit domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YER7_AURAN) HSP 1 Score: 132 bits (333), Expect = 2.360e-32 Identity = 77/174 (44.25%), Postives = 104/174 (59.77%), Query Frame = 1
Query: 109 ATSVRYKWVPPNYYDTPLEERARELGSDPQQLCKTMIMENKAFDENDPTME---RFYLVVVQYAARLSSQKI-SAEVARLKPAGGERLSRGRCNLQVADEEVGLSLSGFPHNGVTVFGGLTP-MPIILSEAVLSLRPSFVWMGAGHPLLKLGVSSTDLVSKLGAIVADISIPRD 615
A++V KWV NYY P+ RA ELG D +Q+ KTM++ENK + +DP + YLVVVQYAA +Q++ SA AR LS+ + N +VADE +LSGF HN VT FG +P++L+ A F+WMGAGH LKLGV+ D + + +V D+S PRD
Sbjct: 2 ASTVCTKWVGANYYGKPMRSRAAELGCDVRQMTKTMLVENKQWRGDDPFARENAKHYLVVVQYAAAYDAQRMRSALSARTG------LSKNQFNFRVADEATMAALSGFEHNAVTPFGMAEKRVPVVLASAARDAPGGFIWMGAGHTDLKLGVTVADFLKRFDPLVLDVSAPRD 169
BLAST of mRNA_P-littoralis_Contig197.1.1 vs. uniprot
Match: A0A196SL50_BLAHN (YbaK/aminoacyl-tRNA synthetase-associated domain-containing protein n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SL50_BLAHN) HSP 1 Score: 133 bits (335), Expect = 4.860e-32 Identity = 78/202 (38.61%), Postives = 115/202 (56.93%), Query Frame = 1
Query: 16 RAAAIEKRLRGEPADLTDPIERVKEHCHRVGATSVRYKWVPPNYYDTPLEERARELGSDPQQLCKTMIMENKAFD--ENDPTMERFYLVVVQYAARLSSQKISAEVARLKPAGGERLSRGRCNLQVADEEVGLSLSGFPHNGVTVFGGLTPMPIILSEAVLSLRPSFVWMGAGHPLLKLGVSSTDLVSKLGAIVADISIPRD 615
R +E R R +P T+ V++ C G ++ P +YY+ LEER L Q LCK++I+ENKA++ ENDP RFYLV+VQY ++L ++++ V LKPA + LS+ + N Q+ADE+ LSGF HN VT G P+PIILS+A+ + ++G G LKL V++ + + V D + PRD
Sbjct: 19 RLKKVEVRYRDDPEQDTEIQAHVRKACVESGMKHFFFRRTPLDYYEWKLEERKAYLRCPVQCLCKSVILENKAWNGAENDPENARFYLVIVQYISKLDTERLRGLVRDLKPAESQ-LSKKKFNFQLADEQTSFELSGFKHNAVTPIGMRQPVPIILSKAIADMPEGGFYLGGGEVDLKLWVNTEEFRACYHPYVMDCTNPRD 219
BLAST of mRNA_P-littoralis_Contig197.1.1 vs. uniprot
Match: A0A7S1FL94_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FL94_9STRA) HSP 1 Score: 134 bits (338), Expect = 6.260e-32 Identity = 74/168 (44.05%), Postives = 101/168 (60.12%), Query Frame = 1
Query: 115 SVRYKWVPPNYYDTPLEERARELGS-DPQQLCKTMIMENKAF----DENDPTMERFYLVVVQYAARLSSQKISAEVARLKPAGGERLSRGRCNLQVADEEVGLSLSGFPHNGVTVFGGLTPMPIILSEAVLSLRPSFVWMGAGHPLLKLGVSSTDLVSKLGAIVADIS 603
S ++WV +YY LEERA LG+ QLCK+M+MEN+A+ D T RFYLVV+QY A + +K+ +EV L+ ERL + N QVA EE +G+PHN VT FG +PII + A++ P+FVWMG GH LKLG++ D + AIV D++
Sbjct: 97 SAVWRWVSTDYYGLDLEERAAVLGAYGTDQLCKSMLMENRAYCGEGSALDRTNARFYLVVLQYTAAIDGKKLESEVRALRGLR-ERLDPSKFNFQVASEEDNGYCTGYPHNAVTPFGIDPSVPIIFASAIMQTVPNFVWMGGGHQHLKLGIAVNDFICATDAIVIDVT 263
BLAST of mRNA_P-littoralis_Contig197.1.1 vs. uniprot
Match: UPI00071183CD (Rho guanine nucleotide exchange factor n=1 Tax=Blastocystis sp. subtype 4 TaxID=944170 RepID=UPI00071183CD) HSP 1 Score: 127 bits (320), Expect = 6.910e-30 Identity = 76/212 (35.85%), Postives = 119/212 (56.13%), Query Frame = 1
Query: 7 IATRAAAIEKRLR-------GEPADLTDPIERVKEHCHRVGATSVRYKWVPPNYYDTPLEERARELGSDPQQLCKTMIMENKAF--DENDPTMERFYLVVVQYAARLSSQKISAEVARLKPAGGERLSRGRCNLQVADEEVGLSLSGFPHNGVTVFGGLTPMPIILSEAVLSLRPSFVWMGAGHPLLKLGVSSTDLVSKLGAIVADISIPRD 615
+ R A+EKRL+ +PA+ T V++ C G ++ P +YY L+ER + L Q LCK++I+ENKA+ +E +P ++YLV+VQY ++L ++K+ V L P ++LS+ + N Q+ADE+V LSGF HN VT G P+PII+S+ + L V++G G LKL V+ ++ + V D + PRD
Sbjct: 9 LTKRIEALEKRLKKVEMKYKDDPANDTSTQALVRKACIDSGMKHFFFRRTPMDYYSWTLDERRKYLKCPIQCLCKSVILENKAWNGEEGNPMNSQYYLVIVQYVSKLDTEKLRGLVRDLMPPE-KQLSKKKFNFQLADEKVSFELSGFSHNAVTPIGMRCPVPIIISKVIAELPEGGVYLGGGEVDLKLWVNVSEFIETYKPFVLDCTSPRD 219
BLAST of mRNA_P-littoralis_Contig197.1.1 vs. uniprot
Match: S9U3Z5_9TRYP (tRNA_edit domain-containing protein n=2 Tax=Strigomonas culicis TaxID=28005 RepID=S9U3Z5_9TRYP) HSP 1 Score: 128 bits (321), Expect = 2.070e-29 Identity = 74/211 (35.07%), Postives = 114/211 (54.03%), Query Frame = 1
Query: 7 IATRAAAIEKRLR-GEPADLTDPIERVKEHCHRVGATSVRYKWVPPNYYDTPLEERARELGSDPQ-QLCKTMIMENKAFDENDPTME---RFYLVVVQYAARLSSQKISAEVARLKPAGGERLSRGRCNLQVADEEVGLSLSGFPHNGVTVFGGLTPMPIILSEAVLSLRPSFVWMGAGHPLLKLGVSSTDLVSKLGAIVADISIPRDGSA 624
+A AA++ + + G A T + ++ C +VR+KWVP +YY PL R L + +CKT+++EN D + RFY+VV QYA R +++++A V RL P G++ + N +VAD + L L+GF H V G TP+P+ILS+ V L P++ WMG GH KL V + V + +VA +++P D A
Sbjct: 72 VAATAASVARPVAVGHDARDTPEVTALRHWCRDHQMATVRFKWVPSDYYTHPLAWRRDVLRAPSMYHICKTIVLENTHCAHEDCQVRENARFYMVVFQYAERFDAERLTAAVRRLNPGIGKK----QFNFRVADPQRALELTGFSHGAVVALGTRTPIPVILSDKVAQLAPAYFWMGGGHVDCKLRVDVDEYVRVMEPLVAPVTVPMDPEA 278
BLAST of mRNA_P-littoralis_Contig197.1.1 vs. uniprot
Match: A0A485L9T9_9STRA (Aste57867_18340 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L9T9_9STRA) HSP 1 Score: 124 bits (311), Expect = 7.280e-29 Identity = 74/204 (36.27%), Postives = 111/204 (54.41%), Query Frame = 1
Query: 1 QLIATRAAAIEKRLRGEPADLTDPIERVKEHCHRVGATSVRYKWVPPNYYDTPLEERARELGSDPQQLCKTMIMENKAFDENDPTMERFYLVVVQYAARLSSQKISAEVARLKPAGGERLSRGRCNLQVADEEVGLSLSGFPHNGVTVFGGLTPMPIILSEAVLSLRPSFVWMGAGHPLLKLGVSSTDLVSKLGAIVADISIPR 612
Q + R A+E RLRG + + R E S + P NYY+ L ERA+ L QLCK++IMEN A+ ++ + RF V+VQY A+++S K++ V G +++SR + N Q A ++ L+GF NGV+ FG LTP+P I+S +L L ++W+G G +KL V+ + V L AI D+S R
Sbjct: 9 QAVEQRVEALEVRLRG-----MESVSRAVEDLRERQVYSAKLHRAPHNYYEWTLAERAKFLNCTVAQLCKSIIMENVAWKDDMHHVPRFVCVIVQYKAKINSDKVAKLVRDAGANGVQKISRKQVNFQHAPPDISAQLTGFEFNGVSPFGMLTPLPTIVSTPILDLP--YIWLGGGAHDVKLKVAVSQCVQALAAISGDVSEAR 205
BLAST of mRNA_P-littoralis_Contig197.1.1 vs. uniprot
Match: A0A482SDB3_9ARCH (YbaK/EbsC family protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SDB3_9ARCH) HSP 1 Score: 123 bits (308), Expect = 2.190e-28 Identity = 70/180 (38.89%), Postives = 106/180 (58.89%), Query Frame = 1
Query: 67 DP-IERVKEHCHRVGATSVRYKWVPPNYYDTPLEERARELGSDPQQLCKTMIMENKAFD---ENDPTMERFYLVVVQYAARLSSQKISAEVARLKPAGGERLSRGRCNLQVADEEVGLSLSGFPHNGVTVFGGLTP-MPIILSEAVLSLRPSFVWMGAGHPLLKLGVSSTDLVSKLGAIV 591
DP I RVK+ G S + +VP NYYD LEERA+ LG QLCK+++ EN A++ E DPT R+YLV+ QY A++++ + + L+ G RLS+ N Q+A + V L+GF HN ++ FG + +PI++ + PS +++G G +KL +S +LV K GA+V
Sbjct: 38 DPSIARVKQDLRCRGIYSTSFLYVPTNYYDYTLEERAKLLGGHVPQLCKSILFENTAWEGENEFDPTNARYYLVITQYVAKINTTTLRNFIQSLR--GTNRLSKSSFNFQLAPDSVSFQLTGFAHNAISPFGLVEKRIPIVICTRCTQVSPSMLYLGGGRVDVKLCLSVGELVEKTGAVV 215 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig197.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig197.1.1 >prot_P-littoralis_Contig197.1.1 ID=prot_P-littoralis_Contig197.1.1|Name=mRNA_P-littoralis_Contig197.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=150bp MIMENKAFDENDPTMERFYLVVVQYAARLSSQKISAEVARLKPAGGERLSback to top mRNA from alignment at P-littoralis_Contig197:12452..15829+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig197.1.1 ID=mRNA_P-littoralis_Contig197.1.1|Name=mRNA_P-littoralis_Contig197.1.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3378bp|location=Sequence derived from alignment at P-littoralis_Contig197:12452..15829+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig197:12452..15829+ >mRNA_P-littoralis_Contig197.1.1 ID=mRNA_P-littoralis_Contig197.1.1|Name=mRNA_P-littoralis_Contig197.1.1|organism=Pylaiella littoralis U1_48|type=CDS|length=450bp|location=Sequence derived from alignment at P-littoralis_Contig197:12452..15829+ (Pylaiella littoralis U1_48)back to top |