prot_P-littoralis_Contig195.94.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig195.94.1
Unique Nameprot_P-littoralis_Contig195.94.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length202
Homology
BLAST of mRNA_P-littoralis_Contig195.94.1 vs. uniprot
Match: D7FVB3_ECTSI (Chain A, Structure Of Mouse Wrn Exonuclease Domain pdb|2E6M|A Chain A, Structure Of Mouse Werner Exonuclease Domain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVB3_ECTSI)

HSP 1 Score: 251 bits (640), Expect = 2.970e-81
Identity = 134/198 (67.68%), Postives = 155/198 (78.28%), Query Frame = 0
Query:    5 GRGKVATIQIAPLRGRAFLFHVFKGGSGFTKETFPATLKSLLEDGTIIKTGVAINNDASHIFKDYGVIVANTVDLRTLAKSNLIVTSSRTLAGMTASLLGKQLPKDTVRFSRWGSAILSGEQRDYAIRDAVASVLLYEKMFVCKDPITSAPSELLDLGVGSEMRLYNSSHSACVAVGELVSEDTAKAALHRWDSSAKL 202
            GR  VAT QIA LRG +FLFH+ +G SGFTKETFPA LK+LLED +IIK GVAIN DA+H+  D GV +A+TVDLR LA S L+VTSSRTLAG+TA LLG+QL KDTVR SRWGS  LS EQRDYAIRDAVAS LLYE +   KDPITS PS   D  +G ++RLYN+SHSACVAVG +VS+ TA+AAL  W SS  +
Sbjct:   15 GREPVATFQIAALRGPSFLFHLQRGSSGFTKETFPAPLKALLEDPSIIKAGVAINTDATHMLNDNGVKMASTVDLRVLAVSKLVVTSSRTLAGLTACLLGRQLLKDTVRCSRWGSPRLSDEQRDYAIRDAVASALLYEAIHKNKDPITSVPSSPFDPAIGLKVRLYNASHSACVAVGHVVSDATAEAALRHWQSSVSV 212          
BLAST of mRNA_P-littoralis_Contig195.94.1 vs. uniprot
Match: A0A6H5JQB4_9PHAE (3'-5' exonuclease domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQB4_9PHAE)

HSP 1 Score: 228 bits (581), Expect = 5.310e-71
Identity = 134/244 (54.92%), Postives = 155/244 (63.52%), Query Frame = 0
Query:    5 GRGKVATIQIAPLRGRAFLFHVFKGGSGFTKETFPATLKSLLEDGTIIKTGVAINNDASHIFKDYGVIVANTVDLRTLAKSNLIVTSSRTLAGMTASLLGKQLPKDTVRFSRWGSAILSGEQRDYAIRDAVASVLLYEKMFVCKDPITSAPSELLDLGVGS----------------------------------------------EMRLYNSSHSACVAVGELVSEDTAKAALHRWDSSAKL 202
            GR  +AT QIA LR  +FLFH+ +G SGFTKETFPA LK+LLED +IIK GVAIN DA+H+  DYGV +A+TV LR LA S L+VTSS+TLAG+TA LLG+QLPKDTVR SRWGSA LS EQRD AIRDAVAS L YE +   KDPITS PS   D  VG                                               ++RLYN+SHSACVAVG +VS+ T +AAL  W SSAKL
Sbjct:   15 GREPLATFQIAALRVPSFLFHLQRGNSGFTKETFPAPLKALLEDPSIIKAGVAINTDATHMLNDYGVKMASTVGLRVLAVSKLVVTSSQTLAGLTACLLGRQLPKDTVRCSRWGSAQLSVEQRDCAIRDAVASALFYEAIHTNKDPITSVPSSPFDPAVGLKVSAYALWYRPYFDVDRQQQIMAGSKFVLKPKQQRLPSFFCPLRVLQVRLYNASHSACVAVGHVVSDATVEAALRHWQSSAKL 258          
BLAST of mRNA_P-littoralis_Contig195.94.1 vs. uniprot
Match: A0A6H5KTU1_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTU1_9PHAE)

HSP 1 Score: 228 bits (581), Expect = 1.000e-67
Identity = 134/244 (54.92%), Postives = 155/244 (63.52%), Query Frame = 0
Query:    5 GRGKVATIQIAPLRGRAFLFHVFKGGSGFTKETFPATLKSLLEDGTIIKTGVAINNDASHIFKDYGVIVANTVDLRTLAKSNLIVTSSRTLAGMTASLLGKQLPKDTVRFSRWGSAILSGEQRDYAIRDAVASVLLYEKMFVCKDPITSAPSELLDLGVGS----------------------------------------------EMRLYNSSHSACVAVGELVSEDTAKAALHRWDSSAKL 202
            GR  +AT QIA LR  +FLFH+ +G SGFTKETFPA LK+LLED +IIK GVAIN DA+H+  DYGV +A+TV LR LA S L+VTSS+TLAG+TA LLG+QLPKDTVR SRWGSA LS EQRD AIRDAVAS L YE +   KDPITS PS   D  VG                                               ++RLYN+SHSACVAVG +VS+ T +AAL  W SSAKL
Sbjct:  320 GREPLATFQIAALRVPSFLFHLQRGNSGFTKETFPAPLKALLEDPSIIKAGVAINTDATHMLNDYGVKMASTVGLRVLAVSKLVVTSSQTLAGLTACLLGRQLPKDTVRCSRWGSAQLSVEQRDCAIRDAVASALFYEAIHTNKDPITSVPSSPFDPAVGLKVSAYALWYRPYFDVDRQQQIMAGSKFVLKPKQQRLPSFFCPLRVLQVRLYNASHSACVAVGHVVSDATVEAALRHWQSSAKL 563          
BLAST of mRNA_P-littoralis_Contig195.94.1 vs. uniprot
Match: A0A6H5KYH3_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYH3_9PHAE)

HSP 1 Score: 212 bits (539), Expect = 1.420e-63
Identity = 112/166 (67.47%), Postives = 130/166 (78.31%), Query Frame = 0
Query:    5 GRGKVATIQIAPLRGRAFLFHVFKGGSGFTKETFPATLKSLLEDGTIIKTGVAINNDASHIFKDYGVIVANTVDLRTLAKSNLIVTSSRTLAGMTASLLGKQLPKDTVRFSRWGSAILSGEQRDYAIRDAVASVLLYEKMFVCKDPITSAPSELLDLGVGSEMRLY 170
            GR  VAT QIA L+G +FLFH+ +G SGFTKETFPA LK+LLED + IK GVAIN DA+H+  DYGV +A+TVDLR LA S L+VTSSRTLAG+TA LLG+QLPKDTVR SRWGSA LS EQRDYAIRDAVAS LLYE +   KDPITS PS   D  +G ++  +
Sbjct:  253 GRKPVATFQIAALKGPSFLFHLQRGSSGFTKETFPAPLKALLEDPSTIKAGVAINTDATHMLNDYGVKMASTVDLRVLAVSKLVVTSSRTLAGLTACLLGRQLPKDTVRCSRWGSAQLSVEQRDYAIRDAVASALLYEAIHKNKDPITSVPSSHFDPAIGLKVSAF 418          
BLAST of mRNA_P-littoralis_Contig195.94.1 vs. uniprot
Match: A0A6H5JQG2_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQG2_9PHAE)

HSP 1 Score: 214 bits (544), Expect = 1.260e-60
Identity = 123/221 (55.66%), Postives = 141/221 (63.80%), Query Frame = 0
Query:    5 GRGKVATIQIAPLRGRAFLFHVFKGGSGFTKETFPATLKSLLEDGTIIKTGVAINNDASHIFKDYGVIVANTVDLRTLAKSNLIVTSSRTLAGMTASLLGKQLPKDTVRFSRWGSAILSGEQRDYAIRDAVASVLLYEKMFVCKDPITSAPSELLDLGVGS----------------------------------------------EMRLYNSSHSACVA 179
            GR  VAT QIA LRG +FLFH+ +G SGFTKETFPA LK+LLED +IIK GVAIN DA+H+  DYGV +A+TVDLR LA S L+VTSSRTLAG+TA L+G+QLPKDTVR SRWGS  LS EQRDYAIRDAVAS LLYE +   KDPITS PS   D  +G                                               ++RLYN+SHSACVA
Sbjct:  523 GREPVATFQIAALRGPSFLFHLQRGSSGFTKETFPAPLKALLEDSSIIKAGVAINTDATHMLNDYGVKMASTVDLRVLAVSRLVVTSSRTLAGLTACLVGRQLPKDTVRCSRWGSPRLSDEQRDYAIRDAVASALLYEAIHENKDPITSVPSSPFDPAIGLKVSAFALCYRPYFDVDRQQRIMAGSKFVLKPKQKRLSSFFCPLRVLQVRLYNASHSACVA 743          
BLAST of mRNA_P-littoralis_Contig195.94.1 vs. uniprot
Match: A0A6H5KJ21_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ21_9PHAE)

HSP 1 Score: 176 bits (447), Expect = 2.230e-53
Identity = 95/138 (68.84%), Postives = 110/138 (79.71%), Query Frame = 0
Query:   65 IFKDYGVIVANTVDLRTLAKSNLIVTSSRTLAGMTASLLGKQLPKDTVRFSRWGSAILSGEQRDYAIRDAVASVLLYEKMFVCKDPITSAPSELLDLGVGSEMRLYNSSHSACVAVGELVSEDTAKAALHRWDSSAKL 202
            +  DYGV +A+TVDLR L+ S L+VTSSRTLAG+TA LLG+QLPKDTVR SR GSA LS EQRDYAIRDAVAS LLYE +   KDPITS PS   D  +G ++RLYN+SHSACVAVG +VS+ TA+AAL  W SSAKL
Sbjct:    1 MLNDYGVQMASTVDLRVLSVSKLVVTSSRTLAGLTACLLGRQLPKDTVRCSRRGSAQLSDEQRDYAIRDAVASALLYEAIHKNKDPITSVPSSPFDPAIGLKVRLYNASHSACVAVGHVVSDATAEAALRHWQSSAKL 138          
BLAST of mRNA_P-littoralis_Contig195.94.1 vs. uniprot
Match: A0A6H5L0E3_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0E3_9PHAE)

HSP 1 Score: 182 bits (463), Expect = 3.830e-51
Identity = 109/200 (54.50%), Postives = 124/200 (62.00%), Query Frame = 0
Query:    5 GRGKVATIQIAPLRGRAFLFHVFKGGSGFTKETFPATLKSLLEDGTIIK----------------------------------------TGVAINNDASHIFKDYGVIVANTVDLRTLAKSNLIVTSSRTLAGMTASLLGKQLPKDTVRFSRWGSAILSGEQRDYAIRDAVASVLLYEKMFVCKDPITSAPSELLDLGVG 164
            GR  VAT QIA LRG +FLFH+ +G SGFTKETFPA LK+LLED +IIK                                         GVAIN DA+HI  DYG+ +A+TV LR LA S L+VTSSRTLAG+TA LLG+QLPKDTVR SRWG+A LS EQRD AIRDAVAS  LYE +   KDPIT   S   DL +G
Sbjct:  372 GREPVATFQIAALRGPSFLFHLQRGSSGFTKETFPAPLKALLEDPSIIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGVAINTDATHILNDYGMKMASTVGLRVLAVSKLVVTSSRTLAGLTACLLGRQLPKDTVRCSRWGNAQLSVEQRDCAIRDAVASAFLYEVIHNNKDPITPVSSSPFDLAIG 571          
BLAST of mRNA_P-littoralis_Contig195.94.1 vs. uniprot
Match: A0A6H5JMD0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMD0_9PHAE)

HSP 1 Score: 165 bits (418), Expect = 3.710e-44
Identity = 95/166 (57.23%), Postives = 110/166 (66.27%), Query Frame = 0
Query:    5 GRGKVATIQIAPLRGRAFLFHVFKGGSGFTKETFPATLKSLLEDGTIIKTGVAINNDASHIFKDYGVIVANTVDLRTLAKSNLIVTSSRTLAGMTASLLGKQLPKDTVRFSRWGSAILSGEQRDYAIRDAVASVLLYEKMFVCKDPITSAPSELLDLGVGSEMRLY 170
            GR  VAT QIA LRG +FL                        +  IIK GV IN DA+H+  DYGV +A+TVDLR LA S L+VTSSRTLAG+TA LLG+QLPKDTVR+SRWGSA LS EQRDYAIRDAVAS LLYE ++  KDPITS PS   D  +G ++  Y
Sbjct:  482 GREPVATFQIAALRGPSFLSE---------------------RELCIIKAGVVINRDATHMLNDYGVKMASTVDLRVLAVSKLVVTSSRTLAGLTACLLGRQLPKDTVRYSRWGSAQLSVEQRDYAIRDAVASALLYEAIYKNKDPITSVPSSPCDPAIGVKVSAY 626          
BLAST of mRNA_P-littoralis_Contig195.94.1 vs. uniprot
Match: A0A6H5KF75_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF75_9PHAE)

HSP 1 Score: 146 bits (368), Expect = 3.830e-40
Identity = 92/186 (49.46%), Postives = 107/186 (57.53%), Query Frame = 0
Query:   65 IFKDYGVIVANTVDLRTLAKSN--LIVTSSRTLAGMTASLLGKQLPKDTVRFSRWGSAILSGEQRDYAIRDAVASVLLYEKMFVCKDPITSAPSELLDLGVGS----------------------------------------------EMRLYNSSHSACVAVGELVSEDTAKAALHRWDSSAKL 202
            +  DY V +A+TV LR LA S   L+VTSSRTLAG+TA LLG+QLPKDTVR SRWGSA LS EQRDYAIRD VAS LLYE +   KDPITS PS   D  +G                                               ++RLYN+SHSACVAVG ++S+ T +AAL  W SSAKL
Sbjct:    1 MLNDYDVKMASTVGLRVLAVSKMVLVVTSSRTLAGLTACLLGRQLPKDTVRCSRWGSAQLSVEQRDYAIRDVVASALLYEAIHKNKDPITSVPSSPFDPAIGLKVSADALWYRPYFDVDRQQQIMAGSKFVLKPKQQRLPSFFCPLRVLQVRLYNASHSACVAVGHVMSDATVEAALRHWQSSAKL 186          
BLAST of mRNA_P-littoralis_Contig195.94.1 vs. uniprot
Match: D7FIV1_ECTSI (Similar to Werner syndrome protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIV1_ECTSI)

HSP 1 Score: 137 bits (344), Expect = 7.880e-34
Identity = 82/194 (42.27%), Postives = 121/194 (62.37%), Query Frame = 0
Query:    9 VATIQIAPLRGRAFLFHVFKGGSGFTKETFPATLKSLLEDGTIIKTGVAINNDASHIFKDYGVIVANTVDLRTLAKSNLIVTSSRTLAGMTASLLGKQLPKDTV-RFSRWGSAILSGEQRDYAIRDAVASVLLYEKMFVCKDPITSAPSELLDLGVGSEMRLYNSSHSACVAVGELVSEDTAKAALHRWDSSAK 201
            V+T+Q++   G A+ F + +G    T   FP  L++LLE+ +I K GV IN+DA+++ +DYG+ VANTVDLRT A+   + T SR+LAGM +SLLG+QLPKD V R SRW S +   ++        VA           +DPI S P   ++L  G+++RLY+++H++CV VGE+  +DTA  AL  W   A+
Sbjct:  133 VSTVQLSLPDGTAYCFQLQRGNKKTTSSNFPKALQNLLENPSIAKVGVNINSDATYLERDYGIEVANTVDLRTYARQCWVETPSRSLAGMASSLLGRQLPKDPVIRSSRWSSPLSDNQE--------VAKF---------QDPIFSPPP--VELHPGTKVRLYSNNHASCVGVGEVQDDDTAAEALAGWFPGAR 307          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig195.94.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVB3_ECTSI2.970e-8167.68Chain A, Structure Of Mouse Wrn Exonuclease Domain... [more]
A0A6H5JQB4_9PHAE5.310e-7154.923'-5' exonuclease domain-containing protein n=2 Ta... [more]
A0A6H5KTU1_9PHAE1.000e-6754.923'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5KYH3_9PHAE1.420e-6367.473'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5JQG2_9PHAE1.260e-6055.663'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5KJ21_9PHAE2.230e-5368.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L0E3_9PHAE3.830e-5154.503'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5JMD0_9PHAE3.710e-4457.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KF75_9PHAE3.830e-4049.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FIV1_ECTSI7.880e-3442.27Similar to Werner syndrome protein n=1 Tax=Ectocar... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1..146
e-value: 5.7E-36
score: 125.6
IPR0025623'-5' exonuclease domainPFAMPF01612DNA_pol_A_exo1coord: 6..144
e-value: 3.2E-10
score: 40.0
NoneNo IPR availablePANTHERPTHR136203-5 EXONUCLEASEcoord: 6..144
NoneNo IPR availablePANTHERPTHR13620:SF45POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN-RELATEDcoord: 6..144
NoneNo IPR availableCDDcd06141WRN_exocoord: 3..144
e-value: 1.67651E-42
score: 138.865
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 6..145

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig195contigP-littoralis_Contig195:416399..417353 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig195.94.1mRNA_P-littoralis_Contig195.94.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig195 416369..417353 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig195.94.1 ID=prot_P-littoralis_Contig195.94.1|Name=mRNA_P-littoralis_Contig195.94.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=202bp
MDASGRGKVATIQIAPLRGRAFLFHVFKGGSGFTKETFPATLKSLLEDGT
IIKTGVAINNDASHIFKDYGVIVANTVDLRTLAKSNLIVTSSRTLAGMTA
SLLGKQLPKDTVRFSRWGSAILSGEQRDYAIRDAVASVLLYEKMFVCKDP
ITSAPSELLDLGVGSEMRLYNSSHSACVAVGELVSEDTAKAALHRWDSSA
KL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR0025623'-5'_exonuclease_dom
IPR012337RNaseH-like_sf