prot_P-littoralis_Contig195.12.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig195.12.3
Unique Nameprot_P-littoralis_Contig195.12.3
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length131
Homology
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BLAST of mRNA_P-littoralis_Contig195.12.3 vs. uniprot
Match: D7FSD5_ECTSI (Mitochondrial import receptor, Tom70 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSD5_ECTSI)

HSP 1 Score: 72.0 bits (175), Expect = 4.280e-12
Identity = 41/87 (47.13%), Postives = 57/87 (65.52%), Query Frame = 0 
Query:   18 GAGAHVLRRYRAMQKTTMRRELKAAEEAFDDEDGLAFSPAAAASKVSSLLDRGMLRLLKRNYDGSREYFVRSRNRSSDTEAATPPAA 104
            G+ A + RRY+ M++T + RELK AE+A  + DG A +   +AS+VSSLLDRG+LR++KRNYDG+RE    +    S    A P  A
Sbjct:  359 GSFAQLERRYKGMEETAITRELKDAEKAGKEGDGSASATTTSASRVSSLLDRGLLRMVKRNYDGAREDIFEAAELLSTLTEADPSEA 445
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig195.12.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FSD5_ECTSI4.280e-1247.13Mitochondrial import receptor, Tom70 homolog n=2 T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 85..130

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig195contigP-littoralis_Contig195:46330..56028 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig195.12.3mRNA_P-littoralis_Contig195.12.3Pylaiella littoralis U1_48mRNAP-littoralis_Contig195 30945..56080 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig195.12.3 ID=prot_P-littoralis_Contig195.12.3|Name=mRNA_P-littoralis_Contig195.12.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=131bp
MAAPDSGTSTVTFVEVPGAGAHVLRRYRAMQKTTMRRELKAAEEAFDDED
GLAFSPAAAASKVSSLLDRGMLRLLKRNYDGSREYFVRSRNRSSDTEAAT
PPAADAEAPPPPPGTNRMVGWKPAIGRAVV*
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