prot_P-littoralis_Contig192.52.6 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig192.52.6
Unique Nameprot_P-littoralis_Contig192.52.6
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length888
Homology
BLAST of mRNA_P-littoralis_Contig192.52.6 vs. uniprot
Match: D7FMM0_ECTSI (DNA repair protein RadA n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMM0_ECTSI)

HSP 1 Score: 958 bits (2476), Expect = 0.000e+0
Identity = 536/714 (75.07%), Postives = 572/714 (80.11%), Query Frame = 0
Query:  104 PTSCFLAPL--CPLSRDGVRG-----EQRRRSRNKQPL-AMRGSDDEGGRRRRSSKWDEGDGSESGSEGATRKAGAPMPRMVSWGLNSRSQPNARKALGSSSKTHTIVHVCEVCGSEHVQWVGRCPTCKEWNCVKPFKVRREQGSNPSRVSRAGVSAASVGVRPGG----GGDLEFSGLAGGAFGSSGGAGWLPEDGFAVPMRLSEVGEAEKQERMPLPGSELPRVLGGGLVPGSMVMLGGDPGVGKSTLLLQLAGQLASSQAGCVTGTFEEKEDDDRHQGEGRVEEGG-DAGAKADAEAFRAGTVVYISGEENNSQVAARAKRMGISGVDLFLYCETDIDVIIDQASVLSMQPQPALVMVDSIQTMRTQDSTSSPGSVTQVKECASRLVRLAKGSGITVFIVGHVTKSGSIAGPKVVEHMVDTVLYLEGDRFNSYRLLRSVKNRFGPSNEIGVFQMESGGLDDVADPSMLFLSDKHVDGDEGDESMDGSAVCVYMEGSRPILCELQSLVTYSRLPSPRRTSDGLPVPRLLLLLAVLQKRLGYDMGSREVYLNIVGGLKVQETAADLAVALAVVSSYTTIPVRSDTCFIGEIGLGGELRPVQQLPRRIQEAETFGFSRVVVPFTRKNRSAGPRRGRGADGGKVAASTAAVGSRGGGRRGEIEVVECRNLKDAVAAGLTAVPKKRSYNRSGRRPSPSTSPAAREGGR-RGRYEPS 803
            P  CF+ P+  C + ++  R      +Q++  R   P  A R  +DE         W+EG+  ES  E  + KAG PMPRMVSWGLNSRSQP+ARKALGS+ KTHTIV+VCEVCGSEHVQWVGRCPTCKEWNCVKPFKVRREQGS+PSRVSRA  ++ + G R GG    GGD EFSGL GGAFG SGGAGWLPE+GFA P  LSEVGEAEKQ RMPLPG+ELPRVLGGGLVPGSMVMLGGDPGVGKSTLLLQLAGQL                              G DA    +AE  RAGTVVYISGEENNSQVAARA RMGI GVDLFLYCETDIDVIIDQ  +L MQPQPALVMVDSIQTMRTQDSTSSPGSVTQVKECASRLVRLAKGSGITVFIVGHVTKSGSIAGPKVVEHMVDTVLYLEGDRFNSYRLLRSVKNRFGPSNEIGVFQME+GGLDDVADPSMLFLSDK+VD D+  E MDGSAVCVYMEGSRPILCELQSLVTY+RLPSPRRTSDGLP+PRLLLLLAVLQKRLGYDM SREVYLNIVGGLKVQETAADLAVALAVVSSYTTIPVR DTCFIGEIGLGGELRPVQQLPRRIQEAETFGFSRVVVPFTRKNRSA  R G  A   +VAA  +  G+   GRRG IEV+ECRNLKDAVAAGLTAVPKKR               + R GG+ RGR++PS
Sbjct:   35 PLPCFVTPVGGCSVGQEQRRSICFEDQQQKHGRPITPRSARRPREDERSSSDTGGSWNEGEDDESVPERRSGKAGTPMPRMVSWGLNSRSQPSARKALGSNKKTHTIVYVCEVCGSEHVQWVGRCPTCKEWNCVKPFKVRREQGSSPSRVSRAAAASVTAGARGGGRGASGGDPEFSGLGGGAFGGSGGAGWLPEEGFAAPTLLSEVGEAEKQGRMPLPGTELPRVLGGGLVPGSMVMLGGDPGVGKSTLLLQLAGQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEDATPVTEAERCRAGTVVYISGEENNSQVAARAARMGIGGVDLFLYCETDIDVIIDQ--MLVMQPQPALVMVDSIQTMRTQDSTSSPGSVTQVKECASRLVRLAKGSGITVFIVGHVTKSGSIAGPKVVEHMVDTVLYLEGDRFNSYRLLRSVKNRFGPSNEIGVFQMEAGGLDDVADPSMLFLSDKNVDDDDHAEHMDGSAVCVYMEGSRPILCELQSLVTYTRLPSPRRTSDGLPIPRLLLLLAVLQKRLGYDMSSREVYLNIVGGLKVQETAADLAVALAVVSSYTTIPVRPDTCFIGEIGLGGELRPVQQLPRRIQEAETFGFSRVVVPFTRKNRSARSRGGGRAGKARVAAGVSEAGN--DGRRGAIEVIECRNLKDAVAAGLTAVPKKRGGG------------SRRSGGKGRGRFDPS 732          
BLAST of mRNA_P-littoralis_Contig192.52.6 vs. uniprot
Match: A0A836CK68_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK68_9STRA)

HSP 1 Score: 440 bits (1132), Expect = 4.830e-140
Identity = 273/576 (47.40%), Postives = 338/576 (58.68%), Query Frame = 0
Query:  174 PRMVSWGLNSRSQPNARKALGSSSKTHTIVHVCEVCGSEHVQWVGRCPTCKEWNCVKPFKVRREQGSNPSRVSRAGVSAASVGVRPGGGGDLEFSGLAGGAFGSSGGAGWLPE--DGFAVPMRLSEVGEAEKQERMPLPGS-ELPRVLGGGLVPGSMVMLGGDPGVGKSTLLLQLAGQLASSQAGCVTGTFEEKEDDDRHQGEGRVEEGGDAGAKADAEAFRA-------------------GTVVYISGEENNSQVAARAKRMGISGVDLFLYCETDIDVIIDQASVLSMQPQPALVMVDSIQTMRTQDSTSSPGSVTQVKECASRLVRLAKGSGITVFIVGHVTKSGSIAGPKVVEHMVDTVLYLEGDRFNSYRLLRSVKNRFGPSNEIGVFQMESGGLDDVADPSMLF----LSDKHVDGDEGDESMDGSAVCVYMEGSRPILCELQSLVTYSRLPSPRRTSDGLPVPRLLLLLAVLQKRLGYDMGSREVYLNIVGGLKVQETAADLAVALAVVSSYTTIPVRSDTCFIGEIGLGGELRPVQQLPRRIQEAETFGFSRVVVPFTRKNRSAGPR 723
            PR +S+GL SRS P+ RKALGS SKTH  V+VCEVCG+E VQWVGRCPTCKEWN V+  KVRR+                                           AGWL    DG+ +  RL+++   E Q R+ LPG+ E  RVLGGGLVPGSMVM+GGDPGVGKSTLLLQLAG+LA              + +                                             G+VVY+SGEE+  Q+AARA+R+G+   +L+L  ETDI +I D     +M P PALV++DSIQTM++ D +S+ GS TQV++ AS L+RLAK + I V I+GHVTKSG IAGP+ VEHMVDTVLYLEGD  N+YRLLRSVKNRFG  +EIGVF+M S GL +VA+PS+LF    L D   DG+ G ++ DG+AV V MEG+RP+LCE  +LVT SR+ +PRR ++G+   RL LLLAVLQ+RL Y   SREVY+N+VGGL++Q                                  GELR VQQL RRI EA  +GF RVVVP     R AG R
Sbjct:   85 PRFISYGLQSRSAPSTRKALGSGSKTHATVYVCEVCGAEQVQWVGRCPTCKEWNSVREHKVRRDGXXXXXXXXXXXXXXXXXXXXX---------------XXXXXXAGWLVPGADGYGIATRLTDITSEEAQRRVELPGAAEFARVLGGGLVPGSMVMIGGDPGVGKSTLLLQLAGRLAGXXXXXXXXXXXXSDTEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSIGSVVYVSGEESTGQIAARAQRLGLQSPNLYLLAETDIHMICDGLE--AMCPPPALVVIDSIQTMQSPDLSSAAGSTTQVRDTASCLLRLAKSTDIAVVIIGHVTKSGDIAGPRTVEHMVDTVLYLEGDPLNAYRLLRSVKNRFGSCHEIGVFEMTSLGLQEVANPSLLFTSTALGDDDEDGEGGGQAPDGTAVLVAMEGTRPLLCE--ALVTPSRMVAPRRAAEGVGQQRLQLLLAVLQRRLRYPTSSREVYVNVVGGLRLQ----------------------------------GELRMVQQLQRRIAEAGKYGFKRVVVPA---GRGAGSR 604          
BLAST of mRNA_P-littoralis_Contig192.52.6 vs. uniprot
Match: A0A838RJB1_9CHLR (DNA repair protein RadA n=1 Tax=Ardenticatenales bacterium TaxID=2614248 RepID=A0A838RJB1_9CHLR)

HSP 1 Score: 409 bits (1050), Expect = 1.460e-130
Identity = 231/512 (45.12%), Postives = 318/512 (62.11%), Query Frame = 0
Query:  203 VHVCEVCGSEHVQWVGRCPTCKEWNCVKP-FKVRREQGS-NPSRVSRAGVSAASVGVRPGGGGDLEFSGLAGGAFGSSGGAGWLPEDGFAVPMRLSEVGEAEKQERMPLPGSELPRVLGGGLVPGSMVMLGGDPGVGKSTLLLQLAGQLASSQAGCVTGTFEEKEDDDRHQGEGRVEEGGDAGAKADAEAFRAGTVVYISGEENNSQVAARAKRMGISGVDLFLYCETDIDVIIDQASVLSMQPQPALVMVDSIQTMRTQDSTSSPGSVTQVKECASRLVRLAKGSGITVFIVGHVTKSGSIAGPKVVEHMVDTVLYLEGDRFNSYRLLRSVKNRFGPSNEIGVFQMESGGLDDVADPSMLFLSDKHVDGDEGDESMDGSAVCVYMEGSRPILCELQSLVTYSRLPSPRRTSDGLPVPRLLLLLAVLQKRLGYDMGSREVYLNIVGGLKVQETAADLAVALAVVSSYTTIPVRSDTCFIGEIGLGGELRPVQQLPRRIQEAETFGFSRVVVP 712
            V++C  CG+EH +WVGRC  C EWN ++   +  R  GS    R +RAG   AS  +                                  P+++ ++ EA   ER+PLP  E  RVLGGG+VPGS+V++GGDPG+GKSTLL Q++G LA +                                         G V+Y+SGEE+  QV  RA+R+G++  DL+L  ET++D+ I+  + L    +P  V++DSIQT+  QD +SS GS++QV+ECA+RL++LAKG  + +F+VGHVTK G+IAGP+V+EH+VDTVLYLEGDRFN++RLLR+ KNRFG +NE+GVF+M  GG+ +V +PS  FL+D             GSAV V MEG+RPIL E+QSLVT S    PRRT++G+ + RL LLLAVL KR+G  + +++V++N+VGGL++ E AADLA+A A+ SSY    +  D   +GEIGLGGELRPV QL +R+ EA   GF+R VVP
Sbjct:    7 VYLCRECGAEHAKWVGRCRDCGEWNTLEETVQEPRASGSFGFGRQARAGTLVASNNL----------------------------------PLKIGDI-EANAYERIPLPMEEFTRVLGGGVVPGSLVLVGGDPGIGKSTLLSQVSGMLAEAL----------------------------------------GPVLYLSGEESVYQVKMRAERLGMADKDLYLLSETNLDIAIEHINTL----RPKAVIIDSIQTVYLQDLSSSAGSISQVRECAARLMQLAKGENLPIFLVGHVTKEGAIAGPRVLEHIVDTVLYLEGDRFNTFRLLRAQKNRFGSTNEVGVFEMVEGGMVEVPNPSEAFLADYQA-------GATGSAVAVTMEGTRPILVEMQSLVTQSAFSQPRRTANGVDMNRLHLLLAVLGKRVGLQLFNQDVFVNVVGGLRISEPAADLAIAAAITSSYREKSIPRDLALVGEIGLGGELRPVSQLDKRLNEAAKLGFTRCVVP 432          
BLAST of mRNA_P-littoralis_Contig192.52.6 vs. uniprot
Match: A0A800BRF5_9CHLR (DNA repair protein RadA n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A800BRF5_9CHLR)

HSP 1 Score: 399 bits (1025), Expect = 5.770e-127
Identity = 229/519 (44.12%), Postives = 313/519 (60.31%), Query Frame = 0
Query:  204 HVCEVCGSEHVQWVGRCPTCKEWNCVKPFKVRREQGSNPSRVSRAGVSAASVGVRPGGGGDLEFSGLAGGAFGSSGGAGWLPEDGFAVPMRLSEVGEAEKQERMPLPGSELPRVLGGGLVPGSMVMLGGDPGVGKSTLLLQLAGQLASSQAGCVTGTFEEKEDDDRHQGEGRVEEGGDAGAKADAEAFRAGTVVYISGEENNSQVAARAKRMGISGVDLFLYCETDIDVIIDQASVLSMQPQPALVMVDSIQTMRTQDSTSSPGSVTQVKECASRLVRLAKGSGITVFIVGHVTKSGSIAGPKVVEHMVDTVLYLEGDRFNSYRLLRSVKNRFGPSNEIGVFQMESGGLDDVADPSMLFLSDKHVDGDEGDESMDGSAVCVYMEGSRPILCELQSLVTYSRLPSPRRTSDGLPVPRLLLLLAVLQKRLGYDMGSREVYLNIVGGLKVQETAADLAVALAVVSSYTTIPVRSDTCFIGEIGLGGELRPVQQLPRRIQEAETFGFSRVVVPFTRKNRSAGP 722
            ++C+ CG    +W+GRCP C EWN +    V RE+   PS             V P                              + P  L ++  AE  ER+P+P  EL RVLGGG+VPGS+V++GGDPG+GKSTLLLQL+  LAS                                          G V+YISGEE+  Q+  RA R+GI+   L++  E ++D II+    L+    P +V+VDSIQ++ +++  S+ GSV QVKECAS L+RLAK +GI +F+VGHVTK+G+IAGPKV+EH+VD VLYLEGDRF++YRLLRSVKNRFG +NE+GVF+M   GL +VA+PS  FL+++         +  GSA+ V MEG+RP+L E+Q+L + +    PRRT++G+   RLLLL+AVL KR+G  +  +++++N+VGGLKV E AADLA+A+A+ SSY  +PV +D   +GEIGL GELR V QL RR+ EA   GF R VVP + + R   P
Sbjct:   10 YICQNCGYSSPKWMGRCPNCGEWNTLVETVVEREERPRPS-------------VMP-----------------------------TSEPQPLPQI-SAEGFERIPVPIGELSRVLGGGIVPGSVVLIGGDPGIGKSTLLLQLSSLLASPD----------------------------------------GAVLYISGEESPQQIKMRADRLGIANQALYILAEVNLDQIINHIERLN----PKMVVVDSIQSVYSEELMSAAGSVGQVKECASTLLRLAKATGIPIFLVGHVTKAGAIAGPKVLEHIVDAVLYLEGDRFHAYRLLRSVKNRFGSTNEVGVFEMGDRGLAEVANPSEAFLAERLP-------NASGSAIAVTMEGTRPLLVEIQALTSTTSFGHPRRTANGVDFNRLLLLVAVLSKRVGLRLSDQDIFVNVVGGLKVNEPAADLAIAVAIASSYKNVPVAADMAIVGEIGLSGELRAVSQLERRLSEAAKLGFRRCVVPKSLRRRVKAP 434          
BLAST of mRNA_P-littoralis_Contig192.52.6 vs. uniprot
Match: A0A0N0RFU1_9CHLR (DNA repair protein RadA n=1 Tax=Ardenticatena maritima TaxID=872965 RepID=A0A0N0RFU1_9CHLR)

HSP 1 Score: 394 bits (1012), Expect = 6.150e-125
Identity = 228/517 (44.10%), Postives = 306/517 (59.19%), Query Frame = 0
Query:  198 KTHTIVHVCEVCGSEHVQWVGRCPTCKEWNCVKPFKVRREQGSNPSRVSRAGVSAASVGVRPGGGGDLEFSGLAGGAFGSSGGAGWLPEDGFAVPMRLSEVGEAEKQERMPLPGSELPRVLGGGLVPGSMVMLGGDPGVGKSTLLLQLAGQLASSQAGCVTGTFEEKEDDDRHQGEGRVEEGGDAGAKADAEAFRAGTVVYISGEENNSQVAARAKRMGISGVDLFLYCETDIDVIIDQASVLSMQPQPALVMVDSIQTMRTQDSTSSPGSVTQVKECASRLVRLAKGSGITVFIVGHVTKSGSIAGPKVVEHMVDTVLYLEGDRFNSYRLLRSVKNRFGPSNEIGVFQMESGGLDDVADPSMLFLSDKHVDGDEGDESMDGSAVCVYMEGSRPILCELQSLVTYSRLPSPRRTSDGLPVPRLLLLLAVLQKRLGYDMGSREVYLNIVGGLKVQETAADLAVALAVVSSYTTIPVRSDTCFIGEIGLGGELRPVQQLPRRIQEAETFGFSRVVVPFT 714
            K    V+VCE CG+EH +W GRC TC  +N +K FK+  E  +  +  +  G S                                        P RL+EV EAE  +R+PL   E  RVLGGG+VPGS+V++GGDPG+GKSTLLLQ+AG+LA  Q                                        G V+Y+SGEE+  Q+  RA+R+GI   DL+L  ET+++ I+     L     P  V+VDSIQT+      SS GSVTQV+ECA+RL++ AK   I +F+VGHVTKSG IAGP+V+EH+VD VLYLEGDR ++YRLLRSVKNRFG ++E+GVF+M   G+ +VA+PS LFL D   D         G+A+ V +EG+R +L E+Q+L T +    PRRT+ G  + RL LL+AVL KR+G  + ++++++N+VGGL++ E AADLAVALA+ SSY   P+      IGEIGLGGELRPV QL +R+ EA   GF+  +VP T
Sbjct:    4 KKARTVYVCEECGAEHPKWGGRCLTCGAYNSLKEFKIAPEPSTRHTAQTWLGASDN-------------------------------------PPRRLTEV-EAEAMQRIPLTNREFARVLGGGIVPGSLVLIGGDPGIGKSTLLLQVAGELAERQ----------------------------------------GVVLYVSGEESTHQIRMRAERLGIHAADLYLLSETNLERIVAHIQHL----HPRAVIVDSIQTVYLDSLASSAGSVTQVRECAARLLQTAKILNIPIFLVGHVTKSGDIAGPRVLEHIVDAVLYLEGDRLHAYRLLRSVKNRFGSTHEVGVFEMAERGMLEVANPSELFLGDHRAD-------PTGAAIAVTLEGTRALLVEIQALSTTTAFSQPRRTATGFDLNRLYLLIAVLTKRVGLKLHNQDIFVNVVGGLRIAEPAADLAVALAIASSYREKPISRRMAAIGEIGLGGELRPVGQLEKRLSEAAKLGFTHCLVPKT 431          
BLAST of mRNA_P-littoralis_Contig192.52.6 vs. uniprot
Match: A0A1W9UIT2_9CHLR (DNA repair protein RadA (Fragment) n=1 Tax=Anaerolineaceae bacterium 4572_32.1 TaxID=1971623 RepID=A0A1W9UIT2_9CHLR)

HSP 1 Score: 392 bits (1008), Expect = 7.900e-125
Identity = 224/519 (43.16%), Postives = 320/519 (61.66%), Query Frame = 0
Query:  195 SSSKTHTIVHVCEVCGSEHVQWVGRCPTCKEWNCVKPFKVRREQGS-NPSRVSRAGVSAASVGVRPGGGGDLEFSGLAGGAFGSSGGAGWLPEDGFAVPMRLSEVGEAEKQERMPLPGSELPRVLGGGLVPGSMVMLGGDPGVGKSTLLLQLAGQLASSQAGCVTGTFEEKEDDDRHQGEGRVEEGGDAGAKADAEAFRAGTVVYISGEENNSQVAARAKRMGISGVDLFLYCETDIDVIIDQASVLSMQPQPALVMVDSIQTMRTQDSTSSPGSVTQVKECASRLVRLAKGSGITVFIVGHVTKSGSIAGPKVVEHMVDTVLYLEGDRFNSYRLLRSVKNRFGPSNEIGVFQMESGGLDDVADPSMLFLSDKHVDGDEGDESMDGSAVCVYMEGSRPILCELQSLVTYSRLPSPRRTSDGLPVPRLLLLLAVLQKRLGYDMGSREVYLNIVGGLKVQETAADLAVALAVVSSYTTIPVRSDTCFIGEIGLGGELRPVQQLPRRIQEAETFGFSRVVVP 712
            S S+T T+ ++C+ CGS  ++W+GRCP C EWN +    V R++ + + S++S +G  +                                       P RL++VG  +  ER+ LP  E  RVLGGG+V GS+V++GGDPG+GKSTLLLQ+A  L                                            G V+Y+SGEE+  Q+  R++R+GI    L+L  ET++DVI    S    Q +P +V+VDSIQT+  +D  S+ GSV+QV+E AS+L+RLAK  G+++F+VGHVTK+GSIAGP+V+EH+VDTVLYLEGDRF++YRLLRSVKNRFGP++E+GVF+M   G+ +VA+PS  FL+++         +  GSA+ V MEG+RP+L E+Q+L + +    PRRT++G+ + RLLLL+AVL KR+G  +  ++V+ N+VGGL++ E AADLA+A AV SS+  IPV +D   +GEIGL GELR V Q+ RR+ EA   GF R ++P
Sbjct:    2 SKSRTKTV-YLCQECGSSQLKWMGRCPDCGEWNTLVETIVERDRRAPHSSQMSLSGAESK--------------------------------------PQRLADVG-TDNMERITLPMPEFSRVLGGGVVRGSLVLIGGDPGIGKSTLLLQVASLLTQK-----------------------------------------GDVLYVSGEESAQQIKMRSQRLGIESNSLYLLTETNLDVI----SAHIQQLKPHVVVVDSIQTVYIEDLNSAAGSVSQVRESASQLMRLAKSQGVSIFLVGHVTKTGSIAGPRVLEHIVDTVLYLEGDRFHTYRLLRSVKNRFGPTSEVGVFEMAQQGMKEVANPSEAFLAERWP-------NAAGSAIAVTMEGTRPLLVEIQALSSATSFRLPRRTANGIDLNRLLLLVAVLSKRVGLQLSDQDVFANVVGGLRIAEPAADLALATAVASSFQNIPVAADMVVVGEIGLSGELRMVGQVERRLNEASKLGFRRCLMP 428          
BLAST of mRNA_P-littoralis_Contig192.52.6 vs. uniprot
Match: UPI001AC69C1C (DNA repair protein RadA n=1 Tax=Thermoflexales bacterium TaxID=2497639 RepID=UPI001AC69C1C)

HSP 1 Score: 392 bits (1006), Expect = 4.180e-124
Identity = 226/522 (43.30%), Postives = 318/522 (60.92%), Query Frame = 0
Query:  195 SSSKTHTIVHVCEVCGSEHVQWVGRCPTCKEWNCVKPFKVRREQGSNPSRVSRAGVSAASVGVRPGGGGDLEFSGLAGGAFGSSGGAGWLPEDGFAVPMRLSEVGEAEKQERMPLPGSELPRVLGGGLVPGSMVMLGGDPGVGKSTLLLQLAGQLASSQAGCVTGTFEEKEDDDRHQGEGRVEEGGDAGAKADAEAFRAGTVVYISGEENNSQVAARAKRMGISGVDLFLYCETDIDVIIDQASVLSMQPQPALVMVDSIQTMRTQDSTSSPGSVTQVKECASRLVRLAKGSGITVFIVGHVTKSGSIAGPKVVEHMVDTVLYLEGDRFNSYRLLRSVKNRFGPSNEIGVFQMESGGLDDVADPSMLFLSDKHVDGDEGDESMDGSAVCVYMEGSRPILCELQSLVTYSRLPSPRRTSDGLPVPRLLLLLAVLQKRLGYDMGSREVYLNIVGGLKVQETAADLAVALAVVSSYTTIPVRSDTCFIGEIGLGGELRPVQQLPRRIQEAETFGFSRVVVPFTRK 716
            + +KT+T   VC+ CGS  ++W+GRCP C EWN     +V  E+ S  SR                GGG                          A P+RLS+V + +  +R+P+   E  RVLGGG+VPG +V++ GDPG+GKSTLL+Q+A Q+A++                                         G V+Y+SGEE+  Q+  RA+R+G  G  L+L  ETD+D I     + +++P+  L ++DSIQTM   + TS+ GS++QV+ECA+RL  +AKGSG +VFIVGHVTKSGSIAGPKV+EH+VDTVLYLEGDRF++YRLLRS KNRFG +NE+GVF+M   G+ +V +PS  FL+++         +  GS++ V MEG+RP+L E+Q+L + S    PRRT++GL + RLLLL AVL KR+G  +G ++V+ N++GGL + E AADLA+A ++ SS   +PV  D   IGE+GL GELR V QLP R+ EA   GF+R ++P T++
Sbjct:    2 AKAKTYTQF-VCQQCGSVQLKWMGRCPDCGEWNSF--VEVIEERSSQKSRA---------------GGGQPR-----------------------ATPIRLSDV-KTDALDRIPMAMEEFSRVLGGGIVPGCLVLVSGDPGIGKSTLLMQVATQVAATH----------------------------------------GPVLYVSGEESAQQIKMRAQRLGDDGQQLYLLTETDLDEI--NLHIANLKPR--LAIIDSIQTMTVSELTSAAGSISQVRECAARLQGVAKGSGTSVFIVGHVTKSGSIAGPKVLEHIVDTVLYLEGDRFHTYRLLRSTKNRFGATNEVGVFEMRGSGMAEVLNPSEAFLAERLP-------NAPGSSIAVTMEGTRPLLVEVQALCSTSAFGLPRRTANGLDMNRLLLLTAVLSKRVGLKLGDQDVFANVIGGLHITEPAADLAMACSIASSMRDVPVAVDLAIIGEVGLSGELRTVGQLPARLNEAAKLGFARALIPKTQR 430          
BLAST of mRNA_P-littoralis_Contig192.52.6 vs. uniprot
Match: A0A7C3B6J2_9CHLR (DNA repair protein RadA n=1 Tax=Caldilineae bacterium TaxID=2420332 RepID=A0A7C3B6J2_9CHLR)

HSP 1 Score: 389 bits (1000), Expect = 2.940e-123
Identity = 220/509 (43.22%), Postives = 308/509 (60.51%), Query Frame = 0
Query:  204 HVCEVCGSEHVQWVGRCPTCKEWNCVKPFKVRREQGSNPSRVSRAGVSAASVGVRPGGGGDLEFSGLAGGAFGSSGGAGWLPEDGFAVPMRLSEVGEAEKQERMPLPGSELPRVLGGGLVPGSMVMLGGDPGVGKSTLLLQLAGQLASSQAGCVTGTFEEKEDDDRHQGEGRVEEGGDAGAKADAEAFRAGTVVYISGEENNSQVAARAKRMGISGVDLFLYCETDIDVIIDQASVLSMQPQPALVMVDSIQTMRTQDSTSSPGSVTQVKECASRLVRLAKGSGITVFIVGHVTKSGSIAGPKVVEHMVDTVLYLEGDRFNSYRLLRSVKNRFGPSNEIGVFQMESGGLDDVADPSMLFLSDKHVDGDEGDESMDGSAVCVYMEGSRPILCELQSLVTYSRLPSPRRTSDGLPVPRLLLLLAVLQKRLGYDMGSREVYLNIVGGLKVQETAADLAVALAVVSSYTTIPVRSDTCFIGEIGLGGELRPVQQLPRRIQEAETFGFSRVVVP 712
            +VC+ CGS H++W+GRCP C EWN +    +  ++G  P+R +RA    + V +                          +  DGF               ER+P+P  EL RVLGGG+VPGS+V++GGDPG+GKSTLLLQL   LA  Q                                          V+YISGEE+ +Q+  RA R+GI+   L++  +T ++ I+ Q   ++    P + +VDSIQ + T   TS+ GSV+QV+ECA++L+RLAK   I +F+VGHVTK G+IAGP+V+EHMVDTVLYLEG+RF++YR+LRSVKNRFG +NE+GVF+M   G+ +V +PS  FL+++         +  GSA+ V +EG+RP+L E+Q+L + +  PSPRRT +G+   RLLLL+AVL KR+G  +  ++V++N+VGGL V+E AADLAVA A+ SS   +PV +D   IGE+GL GELR V QL RR+ EA   GF R +VP
Sbjct:    8 YVCQQCGSAHMKWMGRCPDCGEWNTLVETVIEEDRG--PARRARATSDVSPVPLPD------------------------IAADGF---------------ERIPVPMGELSRVLGGGIVPGSVVLIGGDPGIGKSTLLLQLCALLAEDQ-----------------------------------------DVLYISGEESATQIKMRAARLGINNPHLYILADTHLETILAQIEHMN----PRIAVVDSIQAIYTDALTSAAGSVSQVRECAAQLLRLAKAQAIPIFLVGHVTKEGTIAGPRVLEHMVDTVLYLEGERFHTYRILRSVKNRFGSTNEVGVFEMVECGMQEVPNPSEAFLAERMP-------NAAGSAIAVTLEGTRPLLVEIQALSSTTSFPSPRRTGNGVDFNRLLLLVAVLSKRVGLRLSDQDVFVNVVGGLTVREPAADLAVACAIASSVRNVPVAADLAIIGEVGLSGELRSVHQLARRLSEAGQLGFRRCLVP 423          
BLAST of mRNA_P-littoralis_Contig192.52.6 vs. uniprot
Match: A0A7S4HL01_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HL01_9STRA)

HSP 1 Score: 398 bits (1022), Expect = 4.620e-123
Identity = 276/656 (42.07%), Postives = 362/656 (55.18%), Query Frame = 0
Query:  174 PRMVSWGLN-SRSQPNARKALGSSSKTHTIVHVCEVCGSEHVQWVGRCPTCKEWNCVKPFKVRREQGSNPSRVSRAGVSAASVGVRPGGGGDLEFSGLAGGAFGSSGGAGWLPEDGFAV-----PMRLSEVGEA------------EKQERMPLPGSE-LPRVLGGGLVPGSMVMLGGDPGVGKSTLLLQLAGQLASSQAGCVTGTFEEKEDDDRHQGEGRVEEGGDAGAKADAEAFRAGTVVYISGEENNSQVAARAKRMGISGVDLFLYCETDIDVIID--------------------QASVLSMQPQ--PALVMVDSIQTMRTQDSTSSP-GSVTQVKECASRLVRLAKGSGITVFIVGHVTKSGSIAGPKVVEHMVDTVLYLEGDR-----FNSYRLLRSVKNRFGPSNEIGVFQMES--GGLDDVADPSMLFLSDKHVDGDEGDESMDGSAVCVYMEGSRPILCELQSLVTYSRLP----SPRRTSDGLPVPRLLLLLAVLQKRLGYDMGSREVYLNIVGGLKV-----QETAADLAVALAVVSSYTTIPVRSDTCFIGEIGLGGELRPVQQLPRRIQEAETFGFSRVVVP-FTRKNRSAGPR-RGRGADGGKVAASTAAVGSRGGGRRGEIEVVECRNLKDAVAAGLTA 769
            P M+S+GL   RS P+ RKA+G S  + T VHVC  CGSE+V+W+GRCPTCKEWN ++ F+V R     P   +  G S  S+  RP       F G +    G      WL  DG  +     P+R++++ E                 R+ +PG E L  VLGGG++PGS+ +LGGDPGVGKSTLLLQ AG +AS                 R  G G+ +   D          + G V+Y+SGEEN  QVA+RA R+GI   +L   CET+ D I D                    + +     PQ  P LV++DSIQTM      SS  G VTQV+EC    +RLAK +G  + +VGHVTKSG +AGP+ VEHMVD VLYLEGDR      N  R+LRS KNRFG S E+GV++M    G L  V+DPS LFLS++    D      DG A+ V +EG R I  E+Q+LV  S +     S RRT DG+   RLLL+LAVLQKR G      +V++N+VGG+++     Q + +D+A A+A+VSS T I VR+DTCF+GE+GL GELR V  L +R+ EA   GFSR+V P   R++R    R +G   DG                    IE V+C NL DA++AGL +
Sbjct:   79 PGMMSFGLGRGRSAPSHRKAVGRSGSSSTSVHVCTNCGSEYVKWIGRCPTCKEWNTIQEFRVNR---GGPGGAN--GSSFGSIRSRP------SFDGESDVRVGHPRKTTWL--DGVEIGTSHKPVRMTDIYEEMGFDSENPSSFRPGDNRLCVPGDEELNNVLGGGIMPGSLTLLGGDPGVGKSTLLLQTAGAVASLSL------------PSRGIGMGKDDNSQDK---------QCGPVIYVSGEENAMQVASRAARLGIRETELLFLCETNADFISDTVASYYDRTLGESIDFSSEKEEASYQAGPQRPPCLVVIDSIQTMICDSGGSSAAGGVTQVRECVGVFLRLAKITGTPIVLVGHVTKSGGVAGPRTVEHMVDCVLYLEGDRSSSGGLNHLRMLRSAKNRFGSSEEVGVYEMHQRYGKLVPVSDPSSLFLSNRFDTFDS-----DGCAITVVLEGMRAITVEVQALVAPSSIGGKSFSGRRTVDGISTARLLLILAVLQKRCGVSFSRFDVFINVVGGIRLSNGSRQGSESDVATAVALVSSLTGIAVRADTCFVGEVGLLGELRQVSSLEKRVNEARRMGFSRIVTPDLGRRSRGRRVREKGNYVDG--------------------IEWVKCENLLDAISAGLVS 675          
BLAST of mRNA_P-littoralis_Contig192.52.6 vs. uniprot
Match: A0A482SXN0_9ARCH (DNA repair protein RadA n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SXN0_9ARCH)

HSP 1 Score: 392 bits (1008), Expect = 7.380e-123
Identity = 229/545 (42.02%), Postives = 326/545 (59.82%), Query Frame = 0
Query:  173 MPRMVSWGLNSRSQPNARKALGSSSKTHTIVHVCEVCGSEHVQWVGRCPTCKEWNCVKPFKVRREQGSNPSRVSRAGVSAASVGVRPGGGGDLEFSGLAGGAFGSSGGAGWLPEDGF--AVPMRLSEVGEAEKQERMPLPGSELPRVLGGGLVPGSMVMLGGDPGVGKSTLLLQLAGQLASSQAGCVTGTFEEKEDDDRHQGEGRVEEGGDAGAKADAEAFRAGTVVYISGEENNSQVAARAKRMGISGVDLFLYCETDIDVIIDQASVLSMQPQPALVMVDSIQTMRTQDSTSSPGSVTQVKECASRLVRLAKGSGITVFIVGHVTKSGSIAGPKVVEHMVDTVLYLEGDRFNSYRLLRSVKNRFGPSNEIGVFQMESGGLDDVADPSMLFLSDKHVDGDEGDESMDGSAVCVYMEGSRPILCELQSLVTYSR---LPSPRRTSDGLPVPRLLLLLAVLQKRLGYDMGSREVYLNIVGGLKVQETAADLAVALAVVSSYTTIPVRSDTCFIGEIGLGGELRPVQQLPRRIQEAETFGFSRVVVP 712
            + R   +G+  R      KALG   K     +VCEVCG+EHV+W GRC +CKEWN +K FKV R   ++      + VSAA                       SS  A W+  D    +    +S +   + ++R+ +   E+ RVLGGGLV GS+ +L G+PGVGKST+LLQLA  +A                                             VVYISGEEN  Q+A R KR+ ++  +++L C+ ++D ++D  S  +    P+L++VDSIQTMRT D   S GSV+Q+++ A+RLV+ AK +  ++ +VGHVTK G +AGP+V+EHMVDT+LYLEG     +R+LR+VKNRFG +NE+GV  M   G+ DV++PS LF++ + +      E+ +GSAV V MEGSR +L E+Q LV++S      + RR +DG P+ RLLL+ AV++KRL   +GSR+VYLN+VGGL++ E  ADLAVA+A+VSS T+I ++  T FIGE+GLGGELR  +++ +RI EA   GF RV++P
Sbjct:   28 LSRKHIYGVAVRHSQLFAKALGF--KASAEAYVCEVCGTEHVKWQGRCNSCKEWNTIKAFKVARASSNSYLPPLDSRVSAAQS---------------------SSTKARWINVDVVTNSTLQPMSSIETEDSKQRLTMYSQEVNRVLGGGLVKGSVTLLAGEPGVGKSTILLQLASDIAKKYT----------------------------------------NVVYISGEENQFQLAMRGKRLHLNTDNIYLICDVEMDRVLDMVS--TFHTSPSLLIVDSIQTMRTADCQGSIGSVSQIRDTAARLVQFAKSTSTSIILVGHVTKMGDVAGPRVLEHMVDTLLYLEGSDSADHRILRTVKNRFGSANEVGVLTMTEDGMQDVSNPSALFINSRTLT-----EAQEGSAVMVAMEGSRALLAEVQCLVSFSYGSGKVAARRAADGFPIQRLLLICAVIEKRLRLSLGSRDVYLNVVGGLRISEPTADLAVAMAIVSSLTSIAIQPATVFIGELGLGGELRGGKRVEQRIGEAIARGFKRVILP 502          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig192.52.6 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMM0_ECTSI0.000e+075.07DNA repair protein RadA n=1 Tax=Ectocarpus silicul... [more]
A0A836CK68_9STRA4.830e-14047.40P-loop containing nucleoside triphosphate hydrolas... [more]
A0A838RJB1_9CHLR1.460e-13045.12DNA repair protein RadA n=1 Tax=Ardenticatenales b... [more]
A0A800BRF5_9CHLR5.770e-12744.12DNA repair protein RadA n=1 Tax=Anaerolineae bacte... [more]
A0A0N0RFU1_9CHLR6.150e-12544.10DNA repair protein RadA n=1 Tax=Ardenticatena mari... [more]
A0A1W9UIT2_9CHLR7.900e-12543.16DNA repair protein RadA (Fragment) n=1 Tax=Anaerol... [more]
UPI001AC69C1C4.180e-12443.30DNA repair protein RadA n=1 Tax=Thermoflexales bac... [more]
A0A7C3B6J2_9CHLR2.940e-12343.22DNA repair protein RadA n=1 Tax=Caldilineae bacter... [more]
A0A7S4HL01_9STRA4.620e-12342.07Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A482SXN0_9ARCH7.380e-12342.02DNA repair protein RadA n=1 Tax=archaeon TaxID=190... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 324..522
e-value: 3.6E-8
score: 43.2
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 298..552
e-value: 5.7E-36
score: 126.2
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 302..568
IPR014721Ribosomal protein S5 domain 2-type fold, subgroupGENE3D3.30.230.10coord: 619..779
e-value: 1.2E-18
score: 69.4
NoneNo IPR availablePFAMPF13481AAA_25coord: 392..500
e-value: 3.9E-7
score: 29.8
NoneNo IPR availablePFAMPF13541ChlIcoord: 630..714
e-value: 7.9E-11
score: 41.9
NoneNo IPR availablePIRSRPIRSR001174-2PIRSR001174-2coord: 325..343
e-value: 50.0
score: -0.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 715..741
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 179..195
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 119..195
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 119..161
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 770..887
NoneNo IPR availablePANTHERPTHR32472DNA REPAIR PROTEIN RADAcoord: 202..765
NoneNo IPR availablePANTHERPTHR32472:SF10DNA REPAIR PROTEIN RADA-LIKE PROTEINcoord: 202..765
IPR041166LapB, rubredoxin metal binding domainPFAMPF18073Rubredoxin_2coord: 204..231
e-value: 2.6E-7
score: 30.2
IPR004504DNA repair protein RadAHAMAPMF_01498RadA_bactcoord: 217..767
score: 39.76482
IPR020588DNA recombination and repair protein RecA-like, ATP-binding domainPROSITEPS50162RECA_2coord: 303..496
score: 21.509611
IPR020568Ribosomal protein S5 domain 2-type foldSUPERFAMILY54211Ribosomal protein S5 domain 2-likecoord: 533..763

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig192contigP-littoralis_Contig192:263589..277825 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig192.52.6mRNA_P-littoralis_Contig192.52.6Pylaiella littoralis U1_48mRNAP-littoralis_Contig192 263344..278213 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig192.52.6 ID=prot_P-littoralis_Contig192.52.6|Name=mRNA_P-littoralis_Contig192.52.6|organism=Pylaiella littoralis U1_48|type=polypeptide|length=888bp
MRSAAVAVACGLALASLPTPNAEAVEHTREHRAAAAATTTRSDRLALNCN
NRLRSPIFTGAAVVNFHHQRRPPQQQQQRRGNRRCCRSRYAMAAAATRSS
DLDPTSCFLAPLCPLSRDGVRGEQRRRSRNKQPLAMRGSDDEGGRRRRSS
KWDEGDGSESGSEGATRKAGAPMPRMVSWGLNSRSQPNARKALGSSSKTH
TIVHVCEVCGSEHVQWVGRCPTCKEWNCVKPFKVRREQGSNPSRVSRAGV
SAASVGVRPGGGGDLEFSGLAGGAFGSSGGAGWLPEDGFAVPMRLSEVGE
AEKQERMPLPGSELPRVLGGGLVPGSMVMLGGDPGVGKSTLLLQLAGQLA
SSQAGCVTGTFEEKEDDDRHQGEGRVEEGGDAGAKADAEAFRAGTVVYIS
GEENNSQVAARAKRMGISGVDLFLYCETDIDVIIDQASVLSMQPQPALVM
VDSIQTMRTQDSTSSPGSVTQVKECASRLVRLAKGSGITVFIVGHVTKSG
SIAGPKVVEHMVDTVLYLEGDRFNSYRLLRSVKNRFGPSNEIGVFQMESG
GLDDVADPSMLFLSDKHVDGDEGDESMDGSAVCVYMEGSRPILCELQSLV
TYSRLPSPRRTSDGLPVPRLLLLLAVLQKRLGYDMGSREVYLNIVGGLKV
QETAADLAVALAVVSSYTTIPVRSDTCFIGEIGLGGELRPVQQLPRRIQE
AETFGFSRVVVPFTRKNRSAGPRRGRGADGGKVAASTAAVGSRGGGRRGE
IEVVECRNLKDAVAAGLTAVPKKRSYNRSGRRPSPSTSPAAREGGRRGRY
EPSSSSSAEPEFGWQQRKSPPSGDGNWDDGGGEEQDFGFDDGGGGGGGDD
VEGFEGGWGGEEGRYGGGSGEAEGETEWQGGGERNSG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR027417P-loop_NTPase
IPR014721Ribosomal_S5_D2-typ_fold_subgr
IPR041166Rubredoxin_2
IPR004504DNA_repair_RadA
IPR020588RecA_ATP-bd
IPR020568Ribosomal_S5_D2-typ_fold