prot_P-littoralis_Contig190.12.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig190.12.3
Unique Name	prot_P-littoralis_Contig190.12.3
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	1528

Homology

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BLAST of mRNA_P-littoralis_Contig190.12.3 vs. uniprot
Match: D7FSL9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSL9_ECTSI)

HSP 1 Score: 95.5 bits (236), Expect = 6.780e-16
Identity = 88/202 (43.56%), Postives = 101/202 (50.00%), Query Frame = 0

Query:  977 ESEDDDWGSDFGDFEEAPTPGEMEEPASDTAAAAAAPTVGV-GDASIPRPPVDAAAARGAATASERGVPGATPARQMIVSGPHASMAAXXXXXXXXXXXGAEFKGSPASLAVMVAVFARVFVEGGPA---VGTAVPRRVLSALSGEVEGSRSSLESLVDLAPLLRQARPSCRHRAHARLNKWTTLCILRGIRPVPDALSLED 1174
            ESEDD WGSDFGDFEEAPTP E   P       +AAP VGV G+ S             +ATA  RG  G T A    +S  + + AA                  P+ LA+MV VF   F  GG A       V  R   +L G  +G   S++S VDLAPLLR A P  R R  ARL+ W   CILRGIRPVPDA  L D
Sbjct:  541 ESEDD-WGSDFGDFEEAPTPEEEAGPPE-----SAAPAVGVRGEESA------------SATAGGRG--GGTKAAASAMSA-YVNGAAGVRGER------------PSLLAIMVTVFDEAFDRGGSAELSTSMGVVSRGAPSLGGGAKGEEGSVDSRVDLAPLLRHAHPY-RSRPPARLHHWAAQCILRGIRPVPDASPLGD 708

[Close]

BLAST of mRNA_P-littoralis_Contig190.12.3 vs. uniprot
Match: A0A6H5JWY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWY2_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 7.220e-12
Identity = 91/257 (35.41%), Postives = 103/257 (40.08%), Query Frame = 0

Query:  969 GGEEQLEPESEDDDWGSDFGDFEEAPTPGEMEEPASDT--------------------AAAAAAPTVGVGDASIPRPPVDAAAARGAATASERGVP------GATPARQMIVSGPHASMAAXXXXXXXXXXXGAEFKGSPASLAVMVAVFARVFVEGGPAVGTA---VPRRVLSALSGEVEGSRSSLESLVDLAPLLRQARPSCRHRAHARLNKWTTLCILRGIRPVPDALSLEDGVSG----REGRRHASDGGRTT 1192
            GG+ Q EPESEDD WGSDFGDFEEAPTP E                             A A  P V             A   R   +A             A  A    VSG   +                     P+ LAVMV VF   F  GG A  +    +  R   +L G  +G    L+S VDLAPL+R A P  R RA  RL+ W   CILRGIRPVPDAL L D          GRR +  G  TT
Sbjct:  791 GGDNQ-EPESEDD-WGSDFGDFEEAPTPEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAGAGTPCVAXXXXXXXXXXAPAVGVRAKESAXXXXXXXXXXXKAAASAMSAYVSGAAGATGER-----------------PSLLAVMVTVFDEAFDSGGSAESSTSMGIVMRGAPSLGGGAKGEEGPLDSRVDLAPLMRHAHPY-RSRAPVRLHHWAAQCILRGIRPVPDALRLGDADDADGFDHRGRRSSGRGNFTT 1027

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig190.12.3 vs. uniprot

BLAST of mRNA_P-littoralis_Contig190.12.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FSL9_ECTSI	6.780e-16	43.56	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JWY2_9PHAE	7.220e-12	35.41	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 1312..1332
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1372..1394
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 226..258
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 954..1050
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1496..1515
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..70
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1174..1481
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1217..1243
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 163..541
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 693..727
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 293..325
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 628..646
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 570..924
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 613..627
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..133
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1245..1279
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 384..398
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 346..366
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 968..998
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1464..1481
None	No IPR available	PANTHER	PTHR48126	RE24507P	coord: 161..1509

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig190	contig	P-littoralis_Contig190:66738..73913 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig190.12.3	mRNA_P-littoralis_Contig190.12.3	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig190 66627..79266 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig190.12.3 ID=prot_P-littoralis_Contig190.12.3|Name=mRNA_P-littoralis_Contig190.12.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1528bp
MDTQEEDAWGDFKSTIDEVADGSAAAAAAAATAVSETSIPPPQEELGAGQ
EPEEGEAKGKGDSIVGGATPVAAAVEWLATPLSAAAEQDEEEKTFEFKPV
IDLMGEPPEVTTGTATPPPQQHQQPCGDFDGGGCSNTTDLLDLLAYPPTA
AAATATGSDVSGESMDVFGSSPPLMMAPPPAPAPQPFDTHTSAADAADTD
AAGAADSHAAGIVDDVLNPCLEGIERAAGGEDKRGEEEWVGRLLEPVEAD
RQRGQGDSDDACLPEAAAATTTPTPAAEKSDGEWVDLIGSVGSDLQQGGT
GIIDDNDNSSSSSSSSSSGSNNDGFAAETEKAPPAVSDKGLTTAVNRDEQ
ETQSPKALQQGEQQEQLGDPDGGGRDASLTILGSKANGAGNLFSKTDTTA
AGAEEEEEKEEGEVEDNLFGRGEAFPLPTIEKSDGKTDPSSGQTYPYNER
PEGEEPRQACTDAVTPEPLSAGATPPLREDASGDVAGFSAVETVEAAGAA
VQRIETPEEGAGETAVAAAAAEGSESESSLPAAAAAADLEEREGDVGNLS
GVVAEHAGITFAVPDAAAAHVLDRRDFGDLTPAADGNVKSDAVSAPPGSV
EGSAQGGGDEEKGQQVQGEEENDERSAFEATPTPSSVESQQALEMPPSRP
TAEDGNSRVGSAQPPEFPEDIVVGEDCQHWKPEAAAPAQAQEDAVEEEIK
DDRPESPDYFAFSEKNVVDEEDSTKGYPETSKPCTLLAKGTEHPPREAPP
SSDPAEADDGDGAVGGRQPSDAVVPGSAAAADDELGASRQDETNSGGGEP
VGRTDGSDERTSSGCDDVVGMEATPPAVPELVGGVENRRGSWEAFGQATE
DSGGVSPKEPVGGADSSGEKTPSHDDHGAVEVSPPAVPEQVGDDGGKEHS
SSSSSSTELPAPEPAVAVAEERKIHFEFADAPFVSEEAAEVLPDVAGEAK
AVGPAAAVAATDEVEGNGGGEEQLEPESEDDDWGSDFGDFEEAPTPGEME
EPASDTAAAAAAPTVGVGDASIPRPPVDAAAARGAATASERGVPGATPAR
QMIVSGPHASMAAAAAAAAAAPGGGAEFKGSPASLAVMVAVFARVFVEGG
PAVGTAVPRRVLSALSGEVEGSRSSLESLVDLAPLLRQARPSCRHRAHAR
LNKWTTLCILRGIRPVPDALSLEDGVSGREGRRHASDGGRTTTATAKSER
SGGGGGGGGNKGSVSPKAQPHPPSASASSPSSSPSSEPTKTRVVPPSSAP
LPRPRRRAPPPSRVIPPSSAPPPPPPSVLNKADWTATMPEESPTPDVPSA
IAAAAAAVVQKKANSNAERKEEAEEAEEGQEAVVGSQTALVAGAQKADES
IPAAGTATAPEDGKPAISAPFPDSSGPSSSLRFSEPSSSSSKPAPVFDDA
ELVWGEPAVVSLPTPPAAAAGGSSCEDGDSGGGGGGGSGGKGENALQEKK
DGVSDVGSPGAGGSGRRRRRRRRRRRRRRRRRLLLLPLLHQAWRQRRCPP
QPLSPSPHPPPTTGRLRRLRWKLLRGI*