mRNA_P-littoralis_Contig19.144.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig19.144.1
Unique NamemRNA_P-littoralis_Contig19.144.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig19.144.1 vs. uniprot
Match: A0A6H5JLA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLA3_9PHAE)

HSP 1 Score: 582 bits (1500), Expect = 1.920e-192
Identity = 379/718 (52.79%), Postives = 442/718 (61.56%), Query Frame = 1
Query:  295 GVTDSVTWSRMAILAVHALLLSAGPLSTCHIEAATAGAAANAGWPGWNALSSVVAALPHNNRNLPTH-----------------PSSTAASPKRNKLFQGHKDEAKGCHSCDTKRSSMEE---------ELGMWHVPGGGRRKANMNATKRNMRPSSSSNNNGRSWLGWVHAKQSSTLPKEGTALSRKVLGVKGEAGTTGVVGSGVGPYFDVSRQKLREGGAARWLKRLQRTRPRATSSSARQEQGQQKGAA-----------------RTKAAAVRGTRTPSQGSLAPSVVPAAAMAASSAIADTAARSSPVPSYLQWPSISKGAAAVERKDEEEAGGAGGRTRNNESLPFGAGSRAGRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGAVSLTFKEAMFAGAISRSIAQTCMQPANVVKTLLQGRETASQLSNLSFKLLTRGAGAQFVLSLPHGAANFATLEVILGCSAKIFPDEWRERAGPVLDFLSSSVATVVCSVVSTPQMVITDRIMAGMYPNLVSGVREISRTQGLQGFYTGWNANVAQKIPSYGLTWVFFQQFKRVHRRATDRPPTNTENFVLGAAAAGATVCIMIPMDTVKTRLVTQTAQAGVAPYKGVLRTLTRIVKEEGPGPLYRSLTPRLVSVVPMIGIQFGIYEFVRKELMSRKDEGHKPRYFLPPIVRETLRLGANRGSVQHDYFKDFLRNVYLMEEELM 2319
            G  +S + SRMA LAV+ALLLSAG  S+  + AA+A        PGW+      AA   N  +  TH                    + +S     L +  + +A   H C++KR+S E+         + G    PG         +T++NMR     N N     GWV A++   L  +   L   V    G     G VG+       V  +  R  G A W KRL+      T+S                              RT +A     +TP        V PA A  A+           P PSYL+WPS +    A E K + +   A G+ R+  +LP      AG+S                                 +VSLTF EAMFAGAISRSIAQTCMQPANVVKTLLQGR TASQLSNLSFKLLTRGAGAQFV+S+PHGA N+ATLEVILGCSAKIFPDEWRERAGPVLDFLSSSVATVVCSVVSTPQMV+TDRIMAG+YPNL SGVREI+RTQGL GFY GW+ANVAQKIPSYGLTWVFFQQFKR+HR+ATDRPPTNTENFVLGAAAAGATVCIMIPMDTVKTRLVTQTAQAGV PYKGVL+TLTRIV+EEG GP+YRSLTPRLVSVVPMIGIQFGIYEFVRKE+M+RK E  KP  +L P VR TLR+GA+RGS+Q D+FKDFLRNVYL+EE+++
Sbjct:    6 GAWESFSRSRMATLAVNALLLSAGSPSSRAVAAASAA-------PGWSGP----AAAGKNMMHQITHHLRYXXXXXXXXXXXXXXXXSVSSTSGKYLPRHRRGKAGDNHECESKRASAEDPQRRSRRGAQRGALLPPG-------RTSTRQNMR-----NKNSSGTAGWVEAERREGLGNKVPGLRSAVAAGAGR----GEVGARHAADAAVGSKHYRGWGLAGWAKRLRGD----TASXXXXXXXXXXXXXXXXXXXXXXXXXESLYERTASAINTVMKTPP-------VTPAVAGVATXXXXXXXXX--PAPSYLRWPSKT----AAESKQQGDDVEADGQNRDKIALPRSTRRAAGKSNDVATKPSSGEEEGSLGAAKASRGGGSGS---ASVSLTFTEAMFAGAISRSIAQTCMQPANVVKTLLQGRGTASQLSNLSFKLLTRGAGAQFVMSVPHGAFNYATLEVILGCSAKIFPDEWRERAGPVLDFLSSSVATVVCSVVSTPQMVLTDRIMAGIYPNLASGVREITRTQGLPGFYVGWSANVAQKIPSYGLTWVFFQQFKRLHRKATDRPPTNTENFVLGAAAAGATVCIMIPMDTVKTRLVTQTAQAGVVPYKGVLQTLTRIVREEGLGPIYRSLTPRLVSVVPMIGIQFGIYEFVRKEIMNRKGEEKKPLDWLHPAVRRTLRIGADRGSMQPDFFKDFLRNVYLIEEDMI 676          
BLAST of mRNA_P-littoralis_Contig19.144.1 vs. uniprot
Match: D7FP70_ECTSI (Mitochondrial energy transfer protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP70_ECTSI)

HSP 1 Score: 558 bits (1438), Expect = 1.140e-188
Identity = 278/315 (88.25%), Postives = 299/315 (94.92%), Query Frame = 1
Query: 1375 MFAGAISRSIAQTCMQPANVVKTLLQGRETASQLSNLSFKLLTRGAGAQFVLSLPHGAANFATLEVILGCSAKIFPDEWRERAGPVLDFLSSSVATVVCSVVSTPQMVITDRIMAGMYPNLVSGVREISRTQGLQGFYTGWNANVAQKIPSYGLTWVFFQQFKRVHRRATDRPPTNTENFVLGAAAAGATVCIMIPMDTVKTRLVTQTAQAGVAPYKGVLRTLTRIVKEEGPGPLYRSLTPRLVSVVPMIGIQFGIYEFVRKELMSRKDEGHKPRYFLPPIVRETLRLGANRGSVQHDYFKDFLRNVYLMEEELM 2319
            MFAGA+SRSIAQTCMQPANVVKTLLQGR TASQLSNLSFKLLTRGAGAQFV+SLPHGA N+ATLEVILGCSAKIFPDEWRERAGPVLDFLSSSVATVVCSVVSTPQMV+TDRIMAG+YPNL SGVREI+RTQGL GFY GW+ANVAQKIPSYGLTWVFFQQFKR+HR+ATDRPPTNTENFVLGAAAAGATVCIMIPMDTVKTRLVTQTAQAGV PYKGVL+TLTRIV+EEG GP+YRSLTPRLVSVVPMIGIQFGIYEFVRKELM+RK E  KP  +L P VR TLR+GA+RGS+Q D+FKDFLRNVYL+EEE++
Sbjct:    1 MFAGAVSRSIAQTCMQPANVVKTLLQGRGTASQLSNLSFKLLTRGAGAQFVMSLPHGAFNYATLEVILGCSAKIFPDEWRERAGPVLDFLSSSVATVVCSVVSTPQMVLTDRIMAGIYPNLASGVREITRTQGLPGFYVGWSANVAQKIPSYGLTWVFFQQFKRLHRKATDRPPTNTENFVLGAAAAGATVCIMIPMDTVKTRLVTQTAQAGVVPYKGVLQTLTRIVREEGLGPIYRSLTPRLVSVVPMIGIQFGIYEFVRKELMNRKGEEKKPLEWLHPAVRRTLRIGADRGSMQPDFFKDFLRNVYLIEEEMI 315          
BLAST of mRNA_P-littoralis_Contig19.144.1 vs. uniprot
Match: A0A6H5JU70_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU70_9PHAE)

HSP 1 Score: 429 bits (1103), Expect = 1.410e-135
Identity = 223/330 (67.58%), Postives = 263/330 (79.70%), Query Frame = 1
Query: 1345 GAVSLTFKEAMFAGAISRSIAQTCMQPANVVKTLLQGRETASQLSNLSFKLLTRGAGAQFVLSLPHGAANFATLEVILGCSAKIFPDEWRERAGPVLDFLSSSVATVVCSVVSTPQMVITDRIMAGMYPNLVSGVREISRTQGLQGFYTGWNANVAQKIPSYGLTWVFFQQFKRVHRRATDRPPTNTENFVLGAAAAGATVCIMIPMDTVKTRLVTQTAQAGVAPYKGVLRTLTRIVKEEGPGPLYRSLTPRLVSVVPMIGIQFGIYEFVRKELMSRKDE----GHKPRY-FLPPIVRETLRLGANRGSVQHDYFKDFLRNVYLMEEELM 2319
            G V L FKEA+FAGA+SRSIA T + PA VVKTL+QGR T++QLS+LS KLL+RGAGAQFV+SLPHGA N+ATLEVI+G SAK FP +WRE AGPVLDF++S VAT++CSVVSTPQ+VI DRIM GMYPNLVSG REISR++GL+GFYTGW+ANV+QKIPSYGLTWVF+Q  KR++++ T R PT TE+FVLGA AAG  VC+M+P+DTV TR+VTQ AQ G  PYKG  RTL RIVKEEG G +Y SL  +LVSVVP IGIQFGIY++ RK+L+SRKDE    G  PR   LPP VR  L LG N G    D   DF R +YL EEEL+
Sbjct:  201 GEVHLNFKEALFAGAVSRSIAHTSVHPAIVVKTLMQGRGTSAQLSSLSLKLLSRGAGAQFVMSLPHGAFNYATLEVIMGLSAKFFPADWRETAGPVLDFVTSGVATLLCSVVSTPQVVIEDRIMTGMYPNLVSGFREISRSEGLRGFYTGWSANVSQKIPSYGLTWVFYQASKRLYKKITHRAPTATESFVLGAVAAGGAVCVMLPLDTVLTRVVTQRAQPGFVPYKGAFRTLGRIVKEEGLGAMYSSLPAKLVSVVPAIGIQFGIYDYFRKQLISRKDEDGDDGLLPRDGLLPPSVRRRLGLG-NDGRGGDDSDDDFARRMYLAEEELL 529          
BLAST of mRNA_P-littoralis_Contig19.144.1 vs. uniprot
Match: A0A835Z5P9_9STRA (Mitochondrial energy transfer protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5P9_9STRA)

HSP 1 Score: 373 bits (958), Expect = 1.150e-117
Identity = 183/272 (67.28%), Postives = 219/272 (80.51%), Query Frame = 1
Query: 1375 MFAGAISRSIAQTCMQPANVVKTLLQGRETASQLSNLSFKLLTRGAGAQFVLSLPHGAANFATLEVILGCSAKIFPDEWRERAGPVLDFLSSSVATVVCSVVSTPQMVITDRIMAGMYPNLVSGVREISRTQGLQGFYTGWNANVAQKIPSYGLTWVFFQQFKRVHRRATDRPPTNTENFVLGAAAAGATVCIMIPMDTVKTRLVTQTAQAGVAPYKGVLRTLTRIVKEEGPGPLYRSLTPRLVSVVPMIGIQFGIYEFVRKELMSRKDEGH 2190
            MFAGA+SR+IAQT MQPANVVKTLLQGR T+ QL +LSFKLLTRGAGAQF+LSLPHGA NFATLE +   ++   P       GPVLDF SS+VAT +CS++STPQMVITDRIMA +YPNL S VR IS+T+GL+GFY GW  N+AQKIPSYGLTWVFFQQFK  H+R   R PTN ENF LGAAAAGATVCI+IP+DT KTR+VTQ A  G+ PY GV+  + R+++EEG G LY++L PRL SVVPMIGIQFG+YE++++EL+   + GH
Sbjct:    1 MFAGALSRAIAQTAMQPANVVKTLLQGRSTSGQLKHLSFKLLTRGAGAQFLLSLPHGAFNFATLEAVKEYTSSFLPA--AGAMGPVLDFFSSTVATTICSIISTPQMVITDRIMADIYPNLASAVRTISQTEGLKGFYAGWGPNLAQKIPSYGLTWVFFQQFKLAHQRVVRREPTNGENFALGAAAAGATVCILIPLDTAKTRIVTQVATPGLVPYTGVVECIQRVIREEGIGTLYKALGPRLASVVPMIGIQFGVYEYLKRELLKFNETGH 270          
BLAST of mRNA_P-littoralis_Contig19.144.1 vs. uniprot
Match: D7FWT2_ECTSI (Mitochondrial energy transfer protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWT2_ECTSI)

HSP 1 Score: 331 bits (849), Expect = 6.520e-102
Identity = 162/229 (70.74%), Postives = 193/229 (84.28%), Query Frame = 1
Query: 1447 LQGRETASQLSNLSFKLLTRGAGAQFVLSLPHGAANFATLEVILGCSAKIFPDEWRERAGPVLDFLSSSVATVVCSVVSTPQMVITDRIMAGMYPNLVSGVREISRTQGLQGFYTGWNANVAQKIPSYGLTWVFFQQFKRVHRRATDRPPTNTENFVLGAAAAGATVCIMIPMDTVKTRLVTQTAQAGVAPYKGVLRTLTRIVKEEGPGPLYRSLTPRLVSVVPMIGIQ 2133
            +QGR T++QLS+LS KLL RGAGAQF++SLPHGA N+ATLEVI+G SAK FP +WRE AGPVLDF++S VAT++CSVVSTPQ+VI DRIM GMYPNLVSG REISR++GL+GFYTGW+ANV+QKIPSYGLTWVF+Q  KR++++ T R PT TE+FVLGA AAG  VC+M+P+DTV TR+VTQ AQ G  PYKG  RTL RIV EEG G +Y SL  +LVSVVP IGIQ
Sbjct:    1 MQGRGTSAQLSSLSLKLLRRGAGAQFIMSLPHGAFNYATLEVIMGFSAKFFPADWRETAGPVLDFVTSGVATLLCSVVSTPQVVIEDRIMTGMYPNLVSGFREISRSEGLRGFYTGWSANVSQKIPSYGLTWVFYQASKRLYKKITHRAPTATESFVLGAVAAGGAVCVMLPLDTVLTRVVTQRAQPGFVPYKGAFRTLGRIVNEEGLGAMYSSLPAKLVSVVPAIGIQ 229          
BLAST of mRNA_P-littoralis_Contig19.144.1 vs. uniprot
Match: W7THW6_9STRA (S-adenosylmethionine mitochondrial carrier protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7THW6_9STRA)

HSP 1 Score: 315 bits (806), Expect = 2.920e-92
Identity = 169/280 (60.36%), Postives = 203/280 (72.50%), Query Frame = 1
Query: 1354 SLTFKEAMFAGAISRSIAQTCMQPANVVKTLLQGRETASQLSNLSFKLLTRGAGAQFVLSLPHGAANFATLEVILGCSAKIFPDEWRERAGPVLDFLSSSVATVVCSVVSTPQMVITDRIMAGMYPNLVSGVREISRTQGLQGFYTGWNANVAQKIPSYGLTWVFFQQFKRVHRRATDRPPTNTENFVLGAAAAGATVCIMIPMDTVKTRLVTQTAQ--AGVAPYKGVLRTLTRIVKEEGPGPLYRSLTPRLVSVVPMIGIQFGIYEFVRKELMSRKDEG 2187
            +LTF   M AGA+SRS AQT M PANVVKTLLQ +  A +L+NL+ ++LTRGAGAQF LSLPHGA  FA LE      +  FP  +   AGP  DF+SS+V+T +CSV+STPQMV+TDRIMAG YPNLV GVR + +T G+QG Y GW A +AQKIPSYGLTWVFFQQ K    R  D   TN ENF +GA AA ATVC+MIP+DTVKTR+VTQ A   AGV  YKGV    +R++KEEG    Y  L PRLVSVVPMIGIQFG+YEF+++ +    ++G
Sbjct:  219 TLTFWGNMLAGAVSRSCAQTAMHPANVVKTLLQTKG-AGELANLNVQILTRGAGAQFALSLPHGALAFAVLEATKSTLSSWFPVNF---AGPAFDFVSSAVSTTICSVISTPQMVLTDRIMAGYYPNLVHGVRTVLKTDGVQGLYAGWFAALAQKIPSYGLTWVFFQQLKIARNRWMDHEATNGENFGMGALAAAATVCVMIPLDTVKTRIVTQAANPAAGVH-YKGVWDCFSRVLKEEGLKTFYAPLAPRLVSVVPMIGIQFGVYEFMKRTIAGMPEKG 493          
BLAST of mRNA_P-littoralis_Contig19.144.1 vs. uniprot
Match: A0A7S4D7A1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D7A1_HETAK)

HSP 1 Score: 305 bits (782), Expect = 1.100e-90
Identity = 160/276 (57.97%), Postives = 201/276 (72.83%), Query Frame = 1
Query: 1348 AVSLTFKEAMFAGAISRSIAQTCMQPANVVKTLLQGRETASQLSNLSFKLLTRGAGAQFVLSLPHGAANFATLEVILGCSAKIFPDE-WRERAGPVLDFLSSSVATVVCSVVSTPQMVITDRIMAGMYPNLVSGVREISRTQGLQGFYTGWNANVAQKIPSYGLTWVFFQQFKRVHRRATDRPPTNTENFVLGAAAAGATVCIMIPMDTVKTRLVTQ-TAQAGVAPYKGVLRTLTRIVKEEGPGPLYRSLTPRLVSVVPMIGIQFGIYEFVRKELM 2169
            A  +T+ E M AGA+SRS+AQT MQP NV+KTL Q   TA QL  +SFKLLTRGAGAQF+LS+PHGA  FA +E        + P+  W   AGP+ DF++S+V+T +CSVVSTPQMVITDR+MAG YP+L + V  I+RT+GL+GFY GW   +AQKIPSYGLTWV +Q  K  HR    R  T+ ENF LGA AAGATVC+MIP+DTVKTR+VTQ +A A   PY+ ++   TR+ +EEG G  Y +L PRL SVVPMIGIQF +YE +++ L+
Sbjct:   82 AREMTWTEHMIAGAVSRSVAQTMMQPFNVMKTLKQAHGTADQLKQMSFKLLTRGAGAQFLLSMPHGAIAFAVVEQTKKTLTNLVPNAGWA--AGPLFDFMASTVSTTICSVVSTPQMVITDRLMAGRYPHLGAAVASIARTEGLRGFYNGWFTALAQKIPSYGLTWVLYQGAKDWHRGLVGREATDAENFGLGAFAAGATVCLMIPLDTVKTRIVTQPSASANFVPYRNMVDCFTRVFREEGLGAFYTALPPRLASVVPMIGIQFQLYEAMKRVLV 355          
BLAST of mRNA_P-littoralis_Contig19.144.1 vs. uniprot
Match: A0A7S1BNE3_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BNE3_9STRA)

HSP 1 Score: 297 bits (760), Expect = 3.930e-87
Identity = 160/296 (54.05%), Postives = 194/296 (65.54%), Query Frame = 1
Query: 1357 LTFKEAMFAGAISRSIAQTCMQPANVVKTLLQGR---ETASQ--------------LSNLSFKLLTRGAGAQFVLSLPHGAANFATLEVILGCSAKIFPDEWRE--RAGPVLDFLSSSVATVVCSVVSTPQMVITDRIMAGMYPNLVSGVREISRTQGLQGFYTGWNANVAQKIPSYGLTWVFFQQFKRVHRRATDRPPTNTENFVLGAAAAGATVCIMIPMDTVKTRLVTQTAQAGVAPYKGVLRTLTRIVKEEGPGPLYRSLTPRLVSVVPMIGIQFGIYEFVRKELMSRKDEG 2187
            L F E M  GA+SRS+AQT M PAN +KT+LQ R   + ASQ              L     ++L RGAGAQ +LSLPHGA NFA LE       K+  +  +   R GP LDFLSS +ATV CSVVSTPQM+ITD IMAG YPN+   +  +++ QGL+GFYTGW   +A KIPSYGLTWV FQQ K++  R   RPP N EN V+GA A+  TV IMIPMDT+KTRLVTQ     + PYKG+     RI++EEG    YR L PRL+SVVPMIGIQFGIYEF+ K +++R   G
Sbjct:  118 LCFWETMICGAVSRSVAQTIMHPANTMKTILQSRGGPDAASQFGLEAGRCLIPRDFLRPPVLRVLKRGAGAQLLLSLPHGALNFAVLETTRRALGKMVGEGMKNATRVGPGLDFLSSGIATVCCSVVSTPQMMITDNIMAGTYPNMAKAISGLAQNQGLKGFYTGWFPGIAGKIPSYGLTWVLFQQLKKMQLRIMQRPPKNYENSVMGALASATTVSIMIPMDTIKTRLVTQVNYPNLVPYKGIADAFLRILREEGLVAFYRGLPPRLISVVPMIGIQFGIYEFMVKAMLARDPAG 413          
BLAST of mRNA_P-littoralis_Contig19.144.1 vs. uniprot
Match: A0A4D9D1K6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D1K6_9STRA)

HSP 1 Score: 291 bits (746), Expect = 7.340e-87
Identity = 155/259 (59.85%), Postives = 187/259 (72.20%), Query Frame = 1
Query: 1417 MQPANVVKTLLQGRETASQLSNLSFKLLTRGAGAQFVLSLPHGAANFATLEVILGCSAKIFPDEWRERAGPVLDFLSSSVATVVCSVVSTPQMVITDRIMAGMYPNLVSGVREISRTQGLQGFYTGWNANVAQKIPSYGLTWVFFQQFKRVHRRATDRPPTNTENFVLGAAAAGATVCIMIPMDTVKTRLVTQTAQ--AGVAPYKGVLRTLTRIVKEEGPGPLYRSLTPRLVSVVPMIGIQFGIYEFVRKELMSRKDEG 2187
            M PANVVKTLLQ +  A +L+NL+ ++LTRGAGAQF LSLPHGA  FA LE      +  FP  +   AGP  DF+SS+V+T +CSV+STPQMV+TDRIMAG YPNL  GVR + +T G+QG Y GW A +AQKIPSYGLTWVFFQQ K    R  D   TN ENF +GA AA ATVC+MIP+DTVKTR+VTQ A   AGV  YKGV    +R++KEEG    Y  L PRLVSVVPMIGIQFG+YEF+++ +    ++G
Sbjct:    1 MHPANVVKTLLQTKG-AGELANLNVQILTRGAGAQFALSLPHGALAFAVLEATKSTLSSWFPVNF---AGPAFDFVSSAVSTTICSVISTPQMVLTDRIMAGYYPNLAHGVRTVLKTDGVQGLYAGWFAALAQKIPSYGLTWVFFQQLKIARNRWMDHEATNGENFGMGALAAAATVCVMIPLDTVKTRIVTQAANPAAGVH-YKGVWDCFSRVLKEEGLKTFYAPLAPRLVSVVPMIGIQFGVYEFMKRTIAGMPEKG 254          
BLAST of mRNA_P-littoralis_Contig19.144.1 vs. uniprot
Match: A0A7S4IVX4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IVX4_9STRA)

HSP 1 Score: 293 bits (751), Expect = 9.820e-87
Identity = 157/292 (53.77%), Postives = 192/292 (65.75%), Query Frame = 1
Query: 1357 LTFKEAMFAGAISRSIAQTCMQPANVVKTLLQGRET--------ASQLSNL----SFKLLTRGAGAQFVLSLPHGAANFATLEVILGCSAKIFPDEW-------RERAGPVLDFLSSSVATVVCSVVSTPQMVITDRIMAGMYPNLVSGVREISRTQGLQGFYTGWNANVAQKIPSYGLTWVFFQQFKRVHRRATDRPPTNTENFVLGAAAAGATVCIMIPMDTVKTRLVTQTAQAGVAPYKGVLRTLTRIVKEEGPGPLYRSLTPRLVSVVPMIGIQFGIYEFVRKELMSR 2175
            L F E M  GAISRSIAQT M PAN +KT+LQ R T        A+ +  L    +F  L RGAGAQF LS+PHGA NFA LE +      +  ++         +R GP LDFLSS ++T+ CSVVSTPQM+ITD IMAG YPNL + V  ++  +G+ GFY+GW   +A KIPSY LTW FFQQ K    R   RPP + EN ++G  A+  TVCIMIPMDT+KTRLVTQ     + PYKG+     RI KEEG G  YR LTPRL+SVVPMIGIQFG+YEF++K ++SR
Sbjct:   10 LHFGENMICGAISRSIAQTIMHPANTMKTILQSRRTGALAAGGAATTIRELIHPDNFGTLFRGAGAQFTLSIPHGAVNFAVLEYVRRRMNSVVEEKEFFGRRIDSQRFGPALDFLSSCISTLCCSVVSTPQMMITDNIMAGTYPNLPAAVSGLASERGIAGFYSGWWPGLAGKIPSYALTWTFFQQLKEAQLRIFQRPPKDIENSIMGCLASATTVCIMIPMDTIKTRLVTQLNYPDLVPYKGIGDAAVRIAKEEGMGAFYRGLTPRLISVVPMIGIQFGVYEFMKKVMLSR 301          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig19.144.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JLA3_9PHAE1.920e-19252.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FP70_ECTSI1.140e-18888.25Mitochondrial energy transfer protein n=1 Tax=Ecto... [more]
A0A6H5JU70_9PHAE1.410e-13567.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z5P9_9STRA1.150e-11767.28Mitochondrial energy transfer protein n=1 Tax=Trib... [more]
D7FWT2_ECTSI6.520e-10270.74Mitochondrial energy transfer protein n=1 Tax=Ecto... [more]
W7THW6_9STRA2.920e-9260.36S-adenosylmethionine mitochondrial carrier protein... [more]
A0A7S4D7A1_HETAK1.100e-9057.97Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S1BNE3_9STRA3.930e-8754.05Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
A0A4D9D1K6_9STRA7.340e-8759.85Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S4IVX4_9STRA9.820e-8753.77Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig19contigP-littoralis_Contig19:666399..676545 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FP70
PFAMsMito_carr
Model size3207
Max annot lvl2759|Eukaryota
KEGG koko:K14684
KEGG TC2.A.29.23
Hectar predicted targeting categorysignal peptide
Exons7
Evalue1.22e-194
EggNOG OGsKOG0768@1|root,KOG0768@2759|Eukaryota
DescriptionS-adenosyl-L-methionine transmembrane transport
Cds size2046
COG categoryU
BRITEko00000,ko02000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig19.144.1prot_P-littoralis_Contig19.144.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig19 666675..675660 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789911.9431093-UTR-P-littoralis_Contig19:666398..6666741680789911.9431093-UTR-P-littoralis_Contig19:666398..666674Pylaiella littoralis U1_48UTRP-littoralis_Contig19 666399..666674 +
1680789912.0347128-UTR-P-littoralis_Contig19:675660..6765451680789912.0347128-UTR-P-littoralis_Contig19:675660..676545Pylaiella littoralis U1_48UTRP-littoralis_Contig19 675661..676545 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789911.9606018-CDS-P-littoralis_Contig19:666674..6678081680789911.9606018-CDS-P-littoralis_Contig19:666674..667808Pylaiella littoralis U1_48CDSP-littoralis_Contig19 666675..667808 +
1680789911.971721-CDS-P-littoralis_Contig19:670358..6705171680789911.971721-CDS-P-littoralis_Contig19:670358..670517Pylaiella littoralis U1_48CDSP-littoralis_Contig19 670359..670517 +
1680789911.9829476-CDS-P-littoralis_Contig19:671002..6711411680789911.9829476-CDS-P-littoralis_Contig19:671002..671141Pylaiella littoralis U1_48CDSP-littoralis_Contig19 671003..671141 +
1680789911.994003-CDS-P-littoralis_Contig19:672263..6723871680789911.994003-CDS-P-littoralis_Contig19:672263..672387Pylaiella littoralis U1_48CDSP-littoralis_Contig19 672264..672387 +
1680789912.0030215-CDS-P-littoralis_Contig19:673352..6734691680789912.0030215-CDS-P-littoralis_Contig19:673352..673469Pylaiella littoralis U1_48CDSP-littoralis_Contig19 673353..673469 +
1680789912.0121775-CDS-P-littoralis_Contig19:673987..6741711680789912.0121775-CDS-P-littoralis_Contig19:673987..674171Pylaiella littoralis U1_48CDSP-littoralis_Contig19 673988..674171 +
1680789912.0245473-CDS-P-littoralis_Contig19:675471..6756601680789912.0245473-CDS-P-littoralis_Contig19:675471..675660Pylaiella littoralis U1_48CDSP-littoralis_Contig19 675472..675660 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig19.144.1

>prot_P-littoralis_Contig19.144.1 ID=prot_P-littoralis_Contig19.144.1|Name=mRNA_P-littoralis_Contig19.144.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=682bp
MRRMNGGVTDSVTWSRMAILAVHALLLSAGPLSTCHIEAATAGAAANAGW
PGWNALSSVVAALPHNNRNLPTHPSSTAASPKRNKLFQGHKDEAKGCHSC
DTKRSSMEEELGMWHVPGGGRRKANMNATKRNMRPSSSSNNNGRSWLGWV
HAKQSSTLPKEGTALSRKVLGVKGEAGTTGVVGSGVGPYFDVSRQKLREG
GAARWLKRLQRTRPRATSSSARQEQGQQKGAARTKAAAVRGTRTPSQGSL
APSVVPAAAMAASSAIADTAARSSPVPSYLQWPSISKGAAAVERKDEEEA
GGAGGRTRNNESLPFGAGSRAGRSRSRSSDAESTAAPSGEGDGLGAAKSS
RGGGGPGAVSLTFKEAMFAGAISRSIAQTCMQPANVVKTLLQGRETASQL
SNLSFKLLTRGAGAQFVLSLPHGAANFATLEVILGCSAKIFPDEWRERAG
PVLDFLSSSVATVVCSVVSTPQMVITDRIMAGMYPNLVSGVREISRTQGL
QGFYTGWNANVAQKIPSYGLTWVFFQQFKRVHRRATDRPPTNTENFVLGA
AAAGATVCIMIPMDTVKTRLVTQTAQAGVAPYKGVLRTLTRIVKEEGPGP
LYRSLTPRLVSVVPMIGIQFGIYEFVRKELMSRKDEGHKPRYFLPPIVRE
TLRLGANRGSVQHDYFKDFLRNVYLMEEELM*
back to top

mRNA from alignment at P-littoralis_Contig19:666399..676545+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig19.144.1 ID=mRNA_P-littoralis_Contig19.144.1|Name=mRNA_P-littoralis_Contig19.144.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=10147bp|location=Sequence derived from alignment at P-littoralis_Contig19:666399..676545+ (Pylaiella littoralis U1_48)
GTCGGCGACGGTGATTGAGCCATTGCCACGTATCACGTCGGCTCACACTG TACACACGAGACACGGGGGCGGTACCTAGACTTCGCACTAGTCCTTTCTC CACTGTCGATCCACCAGTCAATTGATTGCTGACGATTAACGGCAGTAGCA GCAGCAGGAGCAATAGCCGTACCTGATATTGTACAACGGAGGAGGACCCC TTGTGTACAGGTACACGTACTGCTGTAGCGTTGAGAGTTTTCAAAAGTCT TCTCGACGCGACACAGATCGAATTTCATGCGCAGAATGAACGGCGGTGTC ACCGATAGCGTGACATGGTCGAGGATGGCCATCCTCGCCGTCCACGCGCT CCTCCTCAGTGCTGGGCCACTGTCGACGTGCCATATAGAGGCGGCGACGG CAGGGGCAGCGGCGAATGCTGGATGGCCAGGCTGGAACGCACTCTCATCG GTGGTGGCCGCCCTGCCGCACAATAACAGGAATCTTCCAACCCACCCTAG CTCCACCGCCGCCTCCCCAAAACGCAATAAGCTCTTCCAGGGGCACAAGG ACGAGGCAAAAGGCTGTCATTCCTGTGACACCAAGCGTTCTTCCATGGAG GAGGAGCTTGGCATGTGGCACGTCCCGGGCGGAGGACGACGAAAAGCAAA TATGAATGCGACCAAGAGAAACATGCGCCCCAGCAGCAGCAGCAACAACA ACGGCAGGTCGTGGCTGGGGTGGGTGCACGCGAAACAATCGTCGACACTG CCAAAGGAGGGAACAGCGTTGTCGCGCAAAGTATTAGGGGTGAAAGGAGA AGCAGGAACAACAGGAGTAGTAGGAAGTGGGGTAGGGCCATATTTTGATG TCTCGCGGCAAAAGCTTAGAGAAGGGGGTGCGGCGCGGTGGTTGAAACGG TTGCAGCGTACTCGCCCAAGGGCAACTTCAAGTTCTGCACGGCAGGAACA GGGGCAGCAGAAAGGCGCCGCACGTACAAAAGCCGCGGCAGTGAGAGGCA CAAGGACCCCGTCCCAAGGAAGCTTAGCTCCTTCAGTTGTACCTGCGGCG GCGATGGCGGCTTCCTCTGCTATTGCGGATACTGCGGCTCGTTCTTCGCC CGTGCCCTCCTACCTCCAGTGGCCGTCCATCAGCAAGGGTGCCGCCGCCG TCGAACGTAAAGATGAAGAAGAAGCCGGCGGCGCCGGCGGACGAACGCGC AACAACGAATCATTACCGTTCGGCGCGGGAAGCCGCGCGGGGCGGTCCCG TTCTAGAAGCAGCGATGCTGAGTCCACCGCTGCGCCGTCGGGCGAAGGAG ATGGATTGGGGGCGGCGAAATCGTCTCGGGGCGGGGGAGGGCCCGGCGCC GTGAGCTTGACTTTCAAGGAAGCCATGTTTGCAGGAGCGATTAGCCGCTC CATCGCGCAGGTAAGATACAAGCATCGCACATTATCGAATCAATCTTGAA AAACAAATCGTGAATGAGACCATACTTCGCACCAATGCGCAAGCTACTCA CCCGTCGTGACCATGCATTGTGGCATTCCTTTCCTCCTGTCGCATGGAAG TTAGTGCGTTGACCACCACCTCTTTTTCTACTGCTGTCGTCATGATACTC GAGTATTACACAGGAAACAGGAAATGACGCGAGGAGCGATTTTTGGAAAA AATACAAGGATACCAAAGAAAGATCACGCACCCGAGACGGGACTCCACGG TTTCTGTAGGAAATACATCATACTCGAATTATTACCGGCAATCGTGACAC ATCGAAACTTGCACTTGTTGTTGAACGAAATCGCGGGTTGACAACATCAG TAACGGTTAGGAAATTTCCCAGAACGTTGCATACTTTCAGTGAGGGGGGC CCCGTGCCCCAAAATTCAAAATTCCAAAACAAATTCCCATTTTTTCACAA CATACGTATTGGGCTACCCAAGGCCCACTCTTACGGTAGAGCCGATAATT GGAATCCAAGGGTTTCACATGAAGAATTGGAATCCAAATTCCAGGATTGG AAAATATTCCTATCTTATGGGGGCTGTTTTCGGTCGGAATCGGAAAATAT TTTCCAACTATTATGCGGATTCCAATCGACTCGCTAGGAACCCACCCTCG GATTCCAACCCAAATGACCTCGGATTCCAAGTTGGAATCCGTTGCGCGCG CGCAGCCACGAGGTTACGCCGCAGTGGTTCACAGCACACAACCGAGCACA GGAACACACGGGCCAGGTGCAGGTACCAAAGCTACATGCGATCCTGGCCG TGCTGGCGATTACGCTTGCCGCTTTGCGCCATCAGCAGCAGTTTATCGAA ATTCGCCCAAACCGCCTGCCATCCATCCGGCAACCCCATCTGATTTCCAA TCGCTGCCCAGATTTTCCGATTCTCCCATATAAATTGGCACCAGTCTGAT TGTCCGACTTGGAATATCAGGCTTGGAGAACGCTTTTCCAACTCGAGAAA TTCCAATTGCCCATCTACCATAAGTGGGCCTAGGTGGCTCTGCAAAGGCA GCAGTCGCTTCAAGTTTATTTTTGTCGTGTTCTACTTACGTGTAGAGAGA GCCGAACTTTTTGTGTGGACAGGCAAGGCGAAAATATGTTTTTATAAGTG CTGTAGAGGCATATGGGTGGAGGCAGCGTAACCTTGAGGTTTCATCCCAT CTTACCTCTTTCCATGCGATCGCGATGACGCCGCATCTTGAGTCTGTAGT CGACGATGTCGGAATATATCAGCATGTGGCAACACCCTCTACGTTTCGCA ATGTGAAACGCCTCGTGGGTGGCGTGGAGACCTGCCCTGTTATATTTTCG TCGGGCGGGGATAAAATCATAGAAACCACGTTCCCTTTTACCTCCCCATA TCTTCGAGGGAATTATCGCGATTGATCACTTCTCCAATCCAGAGATGTTT CTTCTATCCCCTCCCGGGGATGATCGGATGCATCCCCTGCTGCAGAGAAA GCAATAAGTAAACCTAATTTTGTTATGGTGAACCGGTACGCCAACTTACC TGGCGCAGCTCCCATGGGAGCGTTCGATTTGATGTCTCTCTGTCGTTGTA TCGATAACTCTCCGGGCAAAGGTGTCAGAAACAGGAGAGTACCGTTAGTC GACTAGGAATATCCCCGACCAGTTATGTCACGCACGCCATGTCATTCGCG GATCGACCTCTGATCGTTTGTTGCTGGGGATGGCGTTGCGGGAACCGTGT GTTTAACTCATGCACAAAGAACACCGATTTGACTGCGGTCGTGACGGTTC CGGCGCAAAAGCCGGCCACAAAATCACAATGGTATTGCTGTACGAGTAGT TGTGTGGCACTTTCGTCACCCCTTGTGATTTTCTGAACGGTGCAATAGCC GTTCAGAAAATTACAATGTCATTGCTGTACAAGTTGTTGCGGCACTTTCG TCATCCCTTGATGGACGTTTGCAGTTTGCGCCCGCCGGGAAGAAGCACAG CAGTGTTTATTGAGACATTAGGTTTTATAAAGTGTTCCAGTAAATGCTCC AAAAGTATGATACTTCGAGTACGAAGTAACAAACAAGCTGGAATATCAGC TCATGCAAATACAGCATTACTGCTGCTTTAGGTGGCTCAACTCTAATCTT GTATCTGCACGAAAGAGTTGGCTCAATGTTGCAAACAAATTGTATCAAGA AAGAAATTAGGTCTCGACTGCACTCTGACGATTCGTACTCCGTATCTGCG AGCGCCACCAGCATTTTTGTCGATCAGACTGGTACTATATGATAGATATG ATATCATACGTCGTGATTGCGCTGGCATCAGCCGACCTTCGCTGCAATAC GAGCTTTTCATTTGTCGTCCCCGCTCCCCAAGACACAAATTACATACACA CCGATGCACTAACGAGCAATTGATTTTTCTGACAACCCCCCCCCCACCGC CTTTTTCTCACATATATGGGTACACACATACGTGTGCACTGCTGTTTGTT TGTTTTTCAGACATGTATGCAGCCGGCCAACGTGGTGAAGACCCTGCTAC AAGGGCGAGAGACAGCGTCGCAGCTGTCGAACCTGTCGTTCAAGCTGCTG ACAAGAGGGGCAGGCGCGCAGTTCGTCCTGTCCCTGCCCCACGGCGCTGC CAACTTCGCCACCCTAGAGGTATGATGTGCTCCTGAATGAAGACAACTCT TTCTCGAAGAAAAACCTGTCATAAGGAGAAACGTCCGCCCTAAGACGGAA CTCAGGGTGGGATACACGTCTTGAACCCCGTACAAAACGGGTTTCCGAAC ACCCTTGTACGCCCGTGGCCGGGGCCTAAAAACAGTTTATTCCGTTGCCG ATGATACGGTGTGCAAATGGCATTTCGAAAGCATACGCACCTGTGTCAAA ATTTTACCAGTATCGTGTCATACGGAGTACCGTAGGTTGCGTAAGATATC ACACTTTCATTAGATACCACACCCCCTCCGAAAAGTTACACAATTAACAC ACCCGTGCTATTTTTCAATCCCGAAAAAGGCGCGAGTCTTTCTGAGTCGG TGAAAAAGGTGACAGAAGATAGCACACCATCAGTCAAAAATGACACAAAA TCACACACCGTTGTGATGTCTTATCTATCCCTTTTGCCGGCGGCGTTCAT GCAGGTCATCCTGGGGTGCTCGGCGAAGATATTCCCCGACGAGTGGAGGG AGAGGGCGGGGCCAGTGCTGGATTTCTTGTCCTCCAGCGTGGCGACTGTT GTGTGCTCGGTCGTGAGCACTCCCCAGATGGTCATCACCGACAGTGAGTT TGCGGGTTTTCAGCTGATTTATTTTTCTCCGTCTCATTTGCCATATCAGA AAAAATTAGCAACTCATGTGTGCCCTCATGATATGTGACTCCTATGTGAC CCCTGGTATAGTTTGTCCAACATACACCGGAAGGTGTAAACGAGCATCCG GAAGAGATGAGACAACACATGTAGACACAACACTTACATTCGTCACCCGC ACTTCGCGTCTTTCGCTGAGGAGGTCCTGTTTGGATATCATCATTACCGC CGTAGTTTCACGAACTAAGGTGAATCGATCGATATGTAGCTGTCGGGTTG TCGGCGGTTTCTTCCAACGTCAAGTGTCTCTCCCAACGTTAAAGGCGTGC GGTAGATCCTCTCGCGAGGTTTCCAGTGCGCGGCCGTTTTTTGGTTACAG GGTGGGAGGACTCCAGGTTTTGTGTCAGCACGATACTTGTGTAAGATCCC CCCAGGGTCTTGTCGTAGTCTTGTAAGACCTCCCAGGGTCTCGTTGTAGA CAGTGCCTCAAACATCGTTTTTGCCCCGGGGCAGAAGCCTGTTTCTTGCA CGTGACTTTGTTCGAGGAGCACAGCAGTGATACTCGGAAGCCTGGCGGAA TCAAGGGACTCTAAGTCATGGGTGTTGGTGGCTTCTCCATCGTGTTGATT TGGAAAGAGGATTAGACACTCGGGGCGGAGGGAGTGCGCCTGTGCTGCTG CGTGTTCACGTGCACGCAACCTGGCGCTACTTTTTCATGCACACGCAAGG CCAACCACATGTTGCCGCCTGTACACACGCGCTATAGCCTGCTGCTGAGA GGTGTGCACCCCCTACACGAGTGTCACTTTTGTGTCACTCGCTTATTTTG CTCCGGTGTGCAGCCCCACCTCTCTGCGCCGTTTCGCACGACTTGGTTCC CTCGGAGGTGGCCACGGCACGCCTCCGATGTTGTGCTGGCACAGAGGCAC CGTGCCCTGTTGCGTTGCCAAAAGTTGCACTCCGAAGTACTTCGTGTCAT TTTGCTCTCCAAAACAACGGGTCCACGCGTACGGCTGTCTAATTGGGACT GTGTTTGAATGCTGCCGTCTTGTGCGTCACCAACACCGCGCAACAACGCT AAAAATAATCGACAGGAATCATGGCTGGCATGTACCCGAACCTCGTAAGC GGCGTGCGTGAGATAAGCAGGACCCAAGGGTTGCAGGGCTTCTACACCGG ATGGAACGCGAATGTTGCGCAAAAAATCCCGAGTTACGGGTGAGTGAGGG GTGTAATAATGTACATCATATGACCAGGGCGTGGTGGTCCGGTTCTTACA TCTGTATTTTGTTGAGGAAAGAGAGATGCCCTCGAATGAGGAAGTCATCC AAGTGCGTGTGTGTTCTGTGTTATCATGCTATATATTCAGGACGCCAGCT TAAACCTTTCGGTACAATCAAGGTGTGCGCACCAGTCAAGGTCACGACAG ACAAGAGGAAGGCAACACAGTAGTTATTTTATCCGCCTTCCTCCTGCGGT GCTCGCCCTAATTTTTATCGCGAAAAGGTGTCGACCATAATTTTACCTCG TCGACCTGTACCCGAGCCCAATTTCGTTTGCTCACGAAGAAACCGCGCTA CATATACCCACGTTATACGAGTGTGTGTGTTGTCATCCCTTTAATTGGAC GCCACTCTTCACCTTTCGGGTAGGAAGACGCTCCAACCGAGGTCACATAA TAGGAAGTCAACACAGGAGGTTTTTCTGTTATTTTGTACATTTTATTTTC TTTCTCCACTTCCCACGGCGGTAATTGCCTTCATATTTTCTCGCGAGAAA GGGTACAGCCATCCCTTTCCCTCGTCGACACTTCGAATTTTGTTTACTCA CGAATTAACCGTTTTCCACCCTCACGCATGACATGAGAAGAATCCCGGAT CGTGTTACTGCACCGGGATTCGAACTCAAGCGCAAGTGTAAAGAGGATTT CGAGGATAATCAACTGAACCACCGGGGCGACCGGCAGCACGAGCACGTCG TACAATCTGATAGCCGTATTCTCATGTAATCCATTCTGTCTGACCTTTGG CTTGTATGCACTACTCTCCTGTCCAAGTGTACTTGCTGTGAGCTGTTTCG TCATCCACACCGCCTGTGCCGTCTCACCTTGCCTGAACGGTGGTATCCAT TCGCTTTTGCTAATTTCCTTCCCGGCGTCTTGATTTTTTTTCGGGTCTTG TCAGGCTGACGTGGGTTTTCTTCCAGCAGTTTAAGCGCGTGCACCGGAGG GCCACTGATCGCCCTCCCACCAACACTGAAAACTTTGTGCTGGGAGCGGC CGCGGCGGGAGCGACCGTGTGGTGAGTATGTTTAAGGAGGCGTGTTGTTT GGAGGGGTTAGGGGCCATGGCTGTTGTTGTGAATGTTAATGTTTCGCGCG CACACCAGACCTTTGGGTGCTATTACGGAGATACAGCAGTGCACGGCGAG TATCTTGTGATTGGGCATCGTGCGTGCAACTAAGGTTGTCTAGTATCGTC TGAGTGCTGTACAACTTTTCTGACAGCAGCACTCAATGCCATGTATCCCC TGCTGGGCCGAGCGCGATTCAAAAGCCTAGCAAAGCCGAGTTTCATAGGA TACCCCCAAAATTGCCAGGATATTCTGCCGGACTGTGTAGCTCACAGAGT TGTATGTATACTGTATGAACGCTTCGTTCCTGCTGGCAAGGGTGTTGTGC TGCGGCACTAACCTCTTTTCCTAACACCAGCGGTTGTGCGGAGGCAGGCC TCACCACGTATACATTGGTATTTAACGTGTGACCATCCCGAAATGCCCTG CCCTCGTCGTTTGGTGCGGCTCCGCCGTTCGATTTTCAGCATTATGATCC CTATGGACACTGTTAAGACTCGTCTAGTGACGCAGACCGCACAGGCGGGA GTTGCACCGTACAAGGGCGTGCTCCGAACGCTGACGAGAATCGTCAAGGA GGAAGGACCCGGGCCGCTTTACCGCTCCCTCACGCCGAGGCTTGTGTCAG TGGTGCCCATGATCGGAATACAGGTGTGTGTCATCGCAAAAAGCATCGTT TACTCGACTATCCTCACCTTTTGGTGTTGTTCTACTGGTACAGCAACGCA CGATGCAACCGTGTATCGTTGTTTGTTACTCTGGATTCTACGCACATCGA GAATTACCGCAACCCTCCTGAGTGCCGCAACAAATTTCGACCATTAATAA GGCTACAACTACCTGTCCGACAGAATGAGCGGTCTTGCCACTGTCAGTTT CGACTAGACCGCAGAACGAGTCACAGGCACGACTCCCCCCACACACCTGT GCCATAGAAATGTTTTCTTCCTCTCCTACCCCAAGAGATTCGCGGCAAAC AGAGCCCAAGAAATGTGAAATGTGTAAATAGTTAGCACTACACCAGATAC CCCTTTTTGTTCTCGGTTTTCTGTTTCCTAGCTTCTCTCTCTCCTTTCCT TCCCGAGCTTTGCAGTTGGCGCAGTGAGCGCGCCCGTCATGGCCCTCGAC CTGGCGGCAGCGACGCCCGTCGACAGCTTCCAGTTCATTCTGGACATCGT GGAGTTCGGAATAAATGCAGGAGTGAAGGGGTGGCGACTGGAGCGTCTCG CGGTCGCCCGTGGCCCTCGCAATGCCGCGGGCACAGCCGTCGATGACGTC TTAGCCGTAGGGTACTCCCCTCTGGCGCTGCATTCGGATGCGACCGACCC ACCTGGGCTGCGATGCTGATCGGATCACTCCCCTCTGGTGCTGCATCCGA ATGCGGCACCAGAGGGGAGTGATCCGATCAGATCAGCATCGCAGCTTAGG TGGGTCGGTCTCATCCGAATGCAGCGCCAGAGGGGAGTACCCTACGGCTA AGACGTCATCAACGGCTGTGTCCGCGGCATTGCGAGGGCCACGGGCGACC GCGAGACGCTCCAGTCGCCACCCTTCACTCCTGCATTTATTCCGAACTCC ACGATGTCCAGAATGAACTGGTAGCTCTCGACGGGCGCCGCTGCCACCAG ATCGAGGGCCATGACGGGCGCACTCACTGCGCTAACTGCAAAGCCCGGGA GGCAAGGAAGTTAACAGCAAACCAAGAACAAAAAAGAGGGATAAAAGGAG CAGCACTCCGAGGCCCTGGCTCGGCGCGAACGAAGATGCGCGTCGACCGC AAGTTCACCCGCAAGCCCTGCGGCGGGCCGTCTAGGCGCGCGAGAAGATG ACTGAACGGTCTCAACAAAAAAGCGCTCTTCTGTCCCTGTTTCGGTGTCC AAACGAGGTGAAAAAATTTCGAAGCCCCCCCCCCCCCTGTTTGCCCACTT ATCGCTGGATGCATCACGCACAGTTCGGGATCTATGAGTTCGTGCGCAAG GAGCTCATGAGCCGTAAGGATGAGGGGCATAAGCCGCGCTATTTTCTGCC GCCGATCGTTCGGGAAACTCTGCGTTTGGGTGCGAACCGCGGATCTGTGC AGCACGACTACTTCAAAGATTTCCTGCGAAACGTCTATCTCATGGAGGAA GAGCTGATGTGATGAAGGTTTTCAGGTTGATCGATCGATGGATTATTCTG TTGGCGGTCGTCTCAGTTAGCTGGCTCAGGTGCTTTGGTCTCGGTGTTGT ACTGCATAGAGGATGAAGGTATGCGTGACGTGACGTGCGTTCAAGAAAAA GGGCAGGCAGCCAGGTTAGCTAGCCCTTTCTACGGGCCCGGTTCGTGGAG AATGACAAGCAGTGCCACGTGTGTTTGTTTGCAGTTAACATTTATTACTC CCGCAATCGTCCGTCTCGATTGTGAACGATTAAAAAAGACTTCGGTGTTC ATTTGGCACGCTGCGGTCCTTGTCTGGAATTGTTTCCTGTTTCGTTGTGT GTCTATCCATCCTTTGTTGTTGGTATGGCAGCCTATAGTGTAAGCGGTGG TGTCATGTCCTATTTTCTATCGGTAATCGTAGACCTTGTGCGTGTTGCGG GATGTTCTCTCGGAGTCATCGGAAACGTTGGCCGTGACGATGCAGCAGCC CAACCGGCGGGTCACGAGAAGAACTTTTTTCTACAGGCAATTGGCACGGT GGAAAGTCGGTTCCCTTACTTTGATGGAATATTAAGGCCAGCCGGTATGG CGATCGTGTTGGTGACACGAAAGCACCGGCTGGGCAATTGCAGAGTGTTT GGTGTGATTTTTTGTTGCAGTTGGAGCGAAAATCTGGGAATGATGCATGC GTGATCCCTGTTGTATGATACAAGGGCGATATATCATAGAATATGTCAAG GTCGGGTTTCTTTTTTTTTTGTTAAGACTCGGTTGCACGTCTTGAAATAA TGAAATAATGCATTCGTGATCCCAGGTCTACGAGGGCGATATATCGTGGA ATTTGCCGAAGTCGAGTTTGTTTTCTTGCACGATCCTCCGGCCTCTG
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig19:666399..676545+

>mRNA_P-littoralis_Contig19.144.1 ID=mRNA_P-littoralis_Contig19.144.1|Name=mRNA_P-littoralis_Contig19.144.1|organism=Pylaiella littoralis U1_48|type=CDS|length=2046bp|location=Sequence derived from alignment at P-littoralis_Contig19:666399..676545+ (Pylaiella littoralis U1_48)
ATGCGCAGAATGAACGGCGGTGTCACCGATAGCGTGACATGGTCGAGGAT
GGCCATCCTCGCCGTCCACGCGCTCCTCCTCAGTGCTGGGCCACTGTCGA
CGTGCCATATAGAGGCGGCGACGGCAGGGGCAGCGGCGAATGCTGGATGG
CCAGGCTGGAACGCACTCTCATCGGTGGTGGCCGCCCTGCCGCACAATAA
CAGGAATCTTCCAACCCACCCTAGCTCCACCGCCGCCTCCCCAAAACGCA
ATAAGCTCTTCCAGGGGCACAAGGACGAGGCAAAAGGCTGTCATTCCTGT
GACACCAAGCGTTCTTCCATGGAGGAGGAGCTTGGCATGTGGCACGTCCC
GGGCGGAGGACGACGAAAAGCAAATATGAATGCGACCAAGAGAAACATGC
GCCCCAGCAGCAGCAGCAACAACAACGGCAGGTCGTGGCTGGGGTGGGTG
CACGCGAAACAATCGTCGACACTGCCAAAGGAGGGAACAGCGTTGTCGCG
CAAAGTATTAGGGGTGAAAGGAGAAGCAGGAACAACAGGAGTAGTAGGAA
GTGGGGTAGGGCCATATTTTGATGTCTCGCGGCAAAAGCTTAGAGAAGGG
GGTGCGGCGCGGTGGTTGAAACGGTTGCAGCGTACTCGCCCAAGGGCAAC
TTCAAGTTCTGCACGGCAGGAACAGGGGCAGCAGAAAGGCGCCGCACGTA
CAAAAGCCGCGGCAGTGAGAGGCACAAGGACCCCGTCCCAAGGAAGCTTA
GCTCCTTCAGTTGTACCTGCGGCGGCGATGGCGGCTTCCTCTGCTATTGC
GGATACTGCGGCTCGTTCTTCGCCCGTGCCCTCCTACCTCCAGTGGCCGT
CCATCAGCAAGGGTGCCGCCGCCGTCGAACGTAAAGATGAAGAAGAAGCC
GGCGGCGCCGGCGGACGAACGCGCAACAACGAATCATTACCGTTCGGCGC
GGGAAGCCGCGCGGGGCGGTCCCGTTCTAGAAGCAGCGATGCTGAGTCCA
CCGCTGCGCCGTCGGGCGAAGGAGATGGATTGGGGGCGGCGAAATCGTCT
CGGGGCGGGGGAGGGCCCGGCGCCGTGAGCTTGACTTTCAAGGAAGCCAT
GTTTGCAGGAGCGATTAGCCGCTCCATCGCGCAGACATGTATGCAGCCGG
CCAACGTGGTGAAGACCCTGCTACAAGGGCGAGAGACAGCGTCGCAGCTG
TCGAACCTGTCGTTCAAGCTGCTGACAAGAGGGGCAGGCGCGCAGTTCGT
CCTGTCCCTGCCCCACGGCGCTGCCAACTTCGCCACCCTAGAGGTCATCC
TGGGGTGCTCGGCGAAGATATTCCCCGACGAGTGGAGGGAGAGGGCGGGG
CCAGTGCTGGATTTCTTGTCCTCCAGCGTGGCGACTGTTGTGTGCTCGGT
CGTGAGCACTCCCCAGATGGTCATCACCGACAGAATCATGGCTGGCATGT
ACCCGAACCTCGTAAGCGGCGTGCGTGAGATAAGCAGGACCCAAGGGTTG
CAGGGCTTCTACACCGGATGGAACGCGAATGTTGCGCAAAAAATCCCGAG
TTACGGGCTGACGTGGGTTTTCTTCCAGCAGTTTAAGCGCGTGCACCGGA
GGGCCACTGATCGCCCTCCCACCAACACTGAAAACTTTGTGCTGGGAGCG
GCCGCGGCGGGAGCGACCGTGTGCATTATGATCCCTATGGACACTGTTAA
GACTCGTCTAGTGACGCAGACCGCACAGGCGGGAGTTGCACCGTACAAGG
GCGTGCTCCGAACGCTGACGAGAATCGTCAAGGAGGAAGGACCCGGGCCG
CTTTACCGCTCCCTCACGCCGAGGCTTGTGTCAGTGGTGCCCATGATCGG
AATACAGTTCGGGATCTATGAGTTCGTGCGCAAGGAGCTCATGAGCCGTA
AGGATGAGGGGCATAAGCCGCGCTATTTTCTGCCGCCGATCGTTCGGGAA
ACTCTGCGTTTGGGTGCGAACCGCGGATCTGTGCAGCACGACTACTTCAA
AGATTTCCTGCGAAACGTCTATCTCATGGAGGAAGAGCTGATGTGA
back to top