mRNA_P-littoralis_Contig1030.25.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1030.25.1
Unique NamemRNA_P-littoralis_Contig1030.25.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1030.25.1 vs. uniprot
Match: A0A6H5K3F2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3F2_9PHAE)

HSP 1 Score: 394 bits (1012), Expect = 1.390e-134
Identity = 187/241 (77.59%), Postives = 209/241 (86.72%), Query Frame = 1
Query:    4 RFRMDYTEFTALADILRPKLERDQQQGERPGGAVDVEFQLAMTLRFLAGGSVFEVMDSNVIGKSTAYAIVHRVVDAINQSRELECSWPQGEDAAR*CLMYEQRSTNGVIKRCVGAMDGLFVRLVQPSLRRHANPCSFYSGHKKGFGLNFQGVCNARYEITAWTMNCPGSQNDRTAFKHSGFDNLIDTLPDGCFIVGDAAYPPSHRVLVPYPGTAISRSQDAYNFYQSQARISIEQAFGILV 726
            RFRMDYTEF  LAD+LRPKLER+++ G    G + VEFQLAM LRFLAGGSVFEVMD NVI +STAYAIVHRV+DAINQ+REL+C WP+GEDA   C MY +RSTNGVI+ CVGAMDGLFVR+ QPSLRRH NP SFYSGHKKGFG+NFQGVCNARYEI AWTMNCPGS NDRTAFKHS F  ++ TLP G +IVGDAAYP S +VLVPYPGT+++RSQDAYNFYQSQARISIEQAFGI+V
Sbjct:   69 RFRMDYTEFALLADMLRPKLERNERMGALRNGVIPVEFQLAMALRFLAGGSVFEVMDGNVIARSTAYAIVHRVIDAINQTRELDCVWPEGEDALDQCGMYRRRSTNGVIRMCVGAMDGLFVRMTQPSLRRHVNPRSFYSGHKKGFGMNFQGVCNARYEIIAWTMNCPGSCNDRTAFKHSVFGTVLKTLPPGAYIVGDAAYPASDQVLVPYPGTSLTRSQDAYNFYQSQARISIEQAFGIMV 309          
BLAST of mRNA_P-littoralis_Contig1030.25.1 vs. uniprot
Match: A0A6H5K6M2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6M2_9PHAE)

HSP 1 Score: 392 bits (1008), Expect = 7.100e-134
Identity = 187/242 (77.27%), Postives = 208/242 (85.95%), Query Frame = 1
Query:    1 KRFRMDYTEFTALADILRPKLERDQQQGERPGGAVDVEFQLAMTLRFLAGGSVFEVMDSNVIGKSTAYAIVHRVVDAINQSRELECSWPQGEDAAR*CLMYEQRSTNGVIKRCVGAMDGLFVRLVQPSLRRHANPCSFYSGHKKGFGLNFQGVCNARYEITAWTMNCPGSQNDRTAFKHSGFDNLIDTLPDGCFIVGDAAYPPSHRVLVPYPGTAISRSQDAYNFYQSQARISIEQAFGILV 726
            KRFRMDYT+F  LADILRPKL+RD++ G    GA+ VEFQLAMTLRFLAGGSVFEVMDSNVI KSTAYAIVHRV+DAINQ+R+L C WP G+DA     +Y +RSTNGVI+RCVGAMDGLFVRL+ P L+RHA P SFYSGHKK FG+NFQG+CNA YEI  WTMNCPGSQNDRTAFKHSGFD L+  +P  CFIVGDAAYP S+RVLVP PGTA++ SQDAYNFYQSQARISIEQAFGILV
Sbjct:   72 KRFRMDYTDFMTLADILRPKLQRDEKMGALRNGAIPVEFQLAMTLRFLAGGSVFEVMDSNVIAKSTAYAIVHRVIDAINQTRQLNCKWPYGDDAEAQAELYRRRSTNGVIRRCVGAMDGLFVRLIPPCLKRHAVPGSFYSGHKKAFGMNFQGICNASYEIITWTMNCPGSQNDRTAFKHSGFDALLSKMPPDCFIVGDAAYPASNRVLVPDPGTALTLSQDAYNFYQSQARISIEQAFGILV 313          
BLAST of mRNA_P-littoralis_Contig1030.25.1 vs. uniprot
Match: A0A6H5KCG0_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCG0_9PHAE)

HSP 1 Score: 303 bits (776), Expect = 1.000e-99
Identity = 140/193 (72.54%), Postives = 161/193 (83.42%), Query Frame = 1
Query:  148 GGSVFEVMDSNVIGKSTAYAIVHRVVDAINQSRELECSWPQGEDAAR*CLMYEQRSTNGVIKRCVGAMDGLFVRLVQPSLRRHANPCSFYSGHKKGFGLNFQGVCNARYEITAWTMNCPGSQNDRTAFKHSGFDNLIDTLPDGCFIVGDAAYPPSHRVLVPYPGTAISRSQDAYNFYQSQARISIEQAFGILV 726
            GGS+FEVMD  V  KSTAYAIV+RV+DAINQ+RE +C WP+G+DA   C +Y QRSTN VI  CVGAMDGLFV + +PSLRRH NP  FYSGHKKGFG+NFQ VCNARY+ITAWTMNCPGS NDRTAFKHSGF+ ++ TLP G +IVGD AYP S +VLVPYPGT ++ SQD+YNFYQSQARI IEQAFG +V
Sbjct:   51 GGSIFEVMDGCVFAKSTAYAIVYRVIDAINQTREFDCVWPEGDDALDQCGVYRQRSTNNVIHMCVGAMDGLFVLIFEPSLRRHVNPRGFYSGHKKGFGMNFQAVCNARYKITAWTMNCPGSCNDRTAFKHSGFERVLKTLPKGAYIVGDGAYPASDQVLVPYPGTTLTPSQDSYNFYQSQARIFIEQAFGNMV 243          
BLAST of mRNA_P-littoralis_Contig1030.25.1 vs. uniprot
Match: A0A6H5L6B6_9PHAE (DDE Tnp4 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6B6_9PHAE)

HSP 1 Score: 292 bits (747), Expect = 1.860e-94
Identity = 135/230 (58.70%), Postives = 176/230 (76.52%), Query Frame = 1
Query:   37 LADILRPKLERDQQQGERPGGAVDVEFQLAMTLRFLAGGSVFEVMDSNVIGKSTAYAIVHRVVDAINQSRELECSWPQGEDAAR*CLMYEQRSTNGVIKRCVGAMDGLFVRLVQPSLRRHANPCSFYSGHKKGFGLNFQGVCNARYEITAWTMNCPGSQNDRTAFKHSGFDNLIDTLPDGCFIVGDAAYPPSHRVLVPYPGTAISRSQDAYNFYQSQARISIEQAFGILV 726
            L D LRP L+++QQ G    GA+ VE Q+AMTLR+LAGGS++E MD +VI +STAY +   V++A+N   EL C WP+GEDAAR   ++  RS+  V+++CVGA DGLFVR+++PS +  A P  +Y+GHKKGFG+NFQ VC+A+Y I AW MNCPGSQNDRTAF  SGFD L+  LP+G F+VGDAAY  S RV+VP+PGT++S SQDA N+Y SQ R++IEQ +GILV
Sbjct:   73 LVDHLRPALQKNQQMGLLRNGAIPVEDQVAMTLRWLAGGSIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWPEGEDAARAAELFRNRSSMDVVRKCVGATDGLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQAVCDAQYRIMAWMMNCPGSQNDRTAFNFSGFDKLLAGLPEGHFVVGDAAYGASERVVVPFPGTSLSASQDACNYYVSQCRMAIEQTYGILV 302          
BLAST of mRNA_P-littoralis_Contig1030.25.1 vs. uniprot
Match: A0A6H5JJA1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJA1_9PHAE)

HSP 1 Score: 217 bits (553), Expect = 1.610e-65
Identity = 107/214 (50.00%), Postives = 145/214 (67.76%), Query Frame = 1
Query:    4 RFRMDYTEFTALADILRPKLERDQQQGERPGGAVDVEFQLAMTLRFLAGGSVFEVMDSNVIGKSTAYAIVHRVVDAINQSRELECSWPQGEDAAR*CLMYEQRSTNGVIKRCVGAMDGLFVRLVQPSLRRHANPCSFYSGHKKGFGLNFQGVCNARYEITAWTMNCPGSQNDRTAFKHSGFDNLIDTLPDGCFIVGDAAYPPSHRVLVPYPGTA 645
            RFRM+Y +F  L D LRP L+++++ G    GA+ VE+Q+AMTLR+LAGGS++E MD +VI +STAY +   V++A+N   EL C WP+GED           +   V+++CVGAMDGLFVR+++PS +  A P  +Y+GHKKGFG+NFQ VC               SQNDRTAF  SGFD L+  LP+G F+VG+AAY  S RV+VP+PGT+
Sbjct:   73 RFRMEYDDFRVLVDHLRPALQQNEKTGLLRNGAIPVEYQVAMTLRWLAGGSIYEYMDGHVIARSTAYHVTSTVINALNACPELNCKWPEGEDLPEPPSFSATAALMDVVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQ-VC---------------SQNDRTAFNFSGFDKLLAGLPEGHFVVGNAAYGASERVVVPFPGTS 270          
BLAST of mRNA_P-littoralis_Contig1030.25.1 vs. uniprot
Match: A0A6H5KNF2_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNF2_9PHAE)

HSP 1 Score: 190 bits (483), Expect = 1.320e-56
Identity = 84/134 (62.69%), Postives = 109/134 (81.34%), Query Frame = 1
Query:  325 VIKRCVGAMDGLFVRLVQPSLRRHANPCSFYSGHKKGFGLNFQGVCNARYEITAWTMNCPGSQNDRTAFKHSGFDNLIDTLPDGCFIVGDAAYPPSHRVLVPYPGTAISRSQDAYNFYQSQARISIEQAFGILV 726
            V+++CVGAMDGLFVR+++PS +  A P  +Y+GHK GFG+NFQ VC+A+Y I AWTM+CPGSQNDRTAF  + FD L+  LP+G F+VGDAAY  S RV+VP+PGT++S SQDA N+Y SQ R++IEQ +GILV
Sbjct:   17 VVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHKNGFGMNFQAVCDAQYRIVAWTMSCPGSQNDRTAFNFAWFDKLLAGLPEGHFVVGDAAYGASERVVVPFPGTSLSASQDACNYYVSQCRMAIEQTYGILV 150          
BLAST of mRNA_P-littoralis_Contig1030.25.1 vs. uniprot
Match: A0A6H5JUE6_9PHAE (DDE Tnp4 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUE6_9PHAE)

HSP 1 Score: 192 bits (488), Expect = 2.800e-55
Identity = 109/246 (44.31%), Postives = 147/246 (59.76%), Query Frame = 1
Query:    1 KRFRMDYTEFTALADILRPKLERDQQQGERPG--GAVDVEFQLAMTLRFLAGGSVFEVMDSNVIGKSTAYAIVHRVVDAINQSREL-ECSWPQG-EDAAR*CLMYEQRSTNGVIKRCVGAMDGLFVRLVQPSLRRHANPCSFYSGHKKGFGLNFQGVCNARYEITAWTMNCPGSQNDRTAFKHSGFDNLIDTLPDGCFIVGDAAYPPSHRVLVPYPGTAISRSQDAYNFYQSQARISIEQAFGILV 726
            + +RM+   F  LAD+LRP LER+     +    GAV V+ +LA+ LR LAG S  +V     I K T + ++  VVDAIN + E+    +PQ  E+ AR    +E +ST G I  CV A DGLFV+ + PS     N  S++SG+K G+GLN Q  C+A Y   + +    G+ ND TA+  S     +  LP G +++GDAAYP S ++L PYPG  + R QDAYNFY SQ R+ IEQAFGILV
Sbjct:   89 RTYRMEEGCFDKLADLLRPILERNDFYARKRTRHGAVPVKHRLAVALRILAGASYMDVAVLFGIAKETVFHVLWEVVDAINNTPEVGPFFFPQTVEECARQAKEWEAKSTGGAISGCVAAGDGLFVKTIAPSPVDTPNVLSYFSGNKSGYGLNIQATCDANYRFCSMSAISAGATNDWTAWNRSELSRAVARLPPGYYMLGDAAYPLSDQLLTPYPGKLLPRDQDAYNFYLSQLRVKIEQAFGILV 334          
BLAST of mRNA_P-littoralis_Contig1030.25.1 vs. uniprot
Match: A0A6H5JDE6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDE6_9PHAE)

HSP 1 Score: 188 bits (477), Expect = 1.060e-53
Identity = 104/246 (42.28%), Postives = 144/246 (58.54%), Query Frame = 1
Query:    1 KRFRMDYTEFTALADILRPKLERDQQQGE--RPGGAVDVEFQLAMTLRFLAGGSVFEVMDSNVIGKSTAYAIVHRVVDAINQSREL-ECSWPQG-EDAAR*CLMYEQRSTNGVIKRCVGAMDGLFVRLVQPSLRRHANPCSFYSGHKKGFGLNFQGVCNARYEITAWTMNCPGSQNDRTAFKHSGFDNLIDTLPDGCFIVGDAAYPPSHRVLVPYPGTAISRSQDAYNFYQSQARISIEQAFGILV 726
            + +RM+   F  LA++LRP LER+          GAV V+ +LA+ LR  AG S  +V     I K + + ++ +VVDAIN +  +    +PQ  E+  R    +E +ST G    CV A DGLFV+   P++    N  SF+SGHK G+GLN Q  C+A Y   + +    GS ND TA+  S   + +  LP G +++GDAAYP S ++L PYPG  + R QDA+NFY SQ R+ IEQAFGILV
Sbjct:   86 RMYRMEEHSFDKLAELLRPILERNDYSARLRTSSGAVPVKIRLAVALRMFAGASYIDVALLFGIAKESVFNVMWQVVDAINNTPTVGPFFFPQTVEECTRQAREWEVKSTGGAFAGCVAAGDGLFVKTFAPTVVNTPNVLSFFSGHKNGYGLNIQATCDANYRFCSMSAIAAGSTNDWTAWNRSELSDSVARLPPGFYMLGDAAYPLSDQLLTPYPGKLLPRDQDAFNFYLSQLRVKIEQAFGILV 331          
BLAST of mRNA_P-littoralis_Contig1030.25.1 vs. uniprot
Match: A0A6H5JV75_9PHAE (DDE Tnp4 domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV75_9PHAE)

HSP 1 Score: 182 bits (462), Expect = 2.230e-51
Identity = 100/246 (40.65%), Postives = 142/246 (57.72%), Query Frame = 1
Query:    1 KRFRMDYTEFTALADILRPKLERDQQQGERP--GGAVDVEFQLAMTLRFLAGGSVFEVMDSNVIGKSTAYAIVHRVVDAINQSREL-ECSWPQGED-AAR*CLMYEQRSTNGVIKRCVGAMDGLFVRLVQPSLRRHANPCSFYSGHKKGFGLNFQGVCNARYEITAWTMNCPGSQNDRTAFKHSGFDNLIDTLPDGCFIVGDAAYPPSHRVLVPYPGTAISRSQDAYNFYQSQARISIEQAFGILV 726
            + +RM+   F  LA +L P L+       +    GAV  + +LA+ LR +AG S  +      + K TA++I+ +VVDAIN + E+    +PQ ED   R    +E++ST G  +  V A DGLFV+ + P+     N  S+YSG K G+G+N Q  C+A Y   + +   PGS ND TA+ HS     +  LP G +++GDAAYP S  +L PYPG  +   +DA+NFY SQ R+ IEQAFGILV
Sbjct:   92 RMYRMEEPVFNKLAGLLEPILQLYDYYARKRYRRGAVSTKIRLAIGLRMMAGASYIDAAMLFGVSKETAFSILWQVVDAINSTAEVGPFFFPQSEDECTRQAAEWEEKSTGGAFQGVVAAGDGLFVKTLAPTALNTPNVLSYYSGSKCGYGVNVQATCDANYRFCSMSCIAPGSTNDWTAWNHSDLSTAVKNLPPGFYMLGDAAYPLSDHLLTPYPGRGLPLDKDAFNFYLSQLRVRIEQAFGILV 337          
BLAST of mRNA_P-littoralis_Contig1030.25.1 vs. uniprot
Match: A0A6H5JVS8_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS8_9PHAE)

HSP 1 Score: 175 bits (444), Expect = 6.530e-50
Identity = 97/241 (40.25%), Postives = 134/241 (55.60%), Query Frame = 1
Query:    4 RFRMDYTEFTALADILRPKLERDQQQGERPGGAVDVEFQLAMTLRFLAGGSVFEVMDSNVIGKSTAYAIVHRVVDAINQSRELECSWPQGEDAAR*CLMYEQRSTNGVIKRCVGAMDGLFVRLVQPSLRRHANPCSFYSGHKKGFGLNFQGVCNARYEITAWTMNCPGSQNDRTAFKHSGFDNLIDTLPDGCFIVGDAAYPPSHRVLVPYPGTAISRSQDAYNFYQSQARISIEQAFGILV 726
            RFRM+Y +F  L D LRP L ++++ G    GA+ VE+Q+AMTLR+LAGGS++E MD +VI +STAY +   V++A+N   EL C WP+                  V+++CVGAMDGLFVR+++PS +  A P  +Y+GH+KG                                                 +VGDAAY  S RV+VP+PGT++S SQDA N Y SQ R++IEQ +GILV
Sbjct:   73 RFRMEYDDFRVLIDHLRPALHKNEKMGLLRIGAIPVEYQIAMTLRWLAGGSIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWPEAR--------------MDVVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHRKGV------------------------------------------------VVGDAAYGASERVVVPFPGTSLSASQDACNNYVSQYRMAIEQTYGILV 251          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1030.25.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K3F2_9PHAE1.390e-13477.59DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5K6M2_9PHAE7.100e-13477.27DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KCG0_9PHAE1.000e-9972.54DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5L6B6_9PHAE1.860e-9458.70DDE Tnp4 domain-containing protein n=3 Tax=Ectocar... [more]
A0A6H5JJA1_9PHAE1.610e-6550.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNF2_9PHAE1.320e-5662.69DDE Tnp4 domain-containing protein n=2 Tax=Ectocar... [more]
A0A6H5JUE6_9PHAE2.800e-5544.31DDE Tnp4 domain-containing protein n=3 Tax=Ectocar... [more]
A0A6H5JDE6_9PHAE1.060e-5342.28DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JV75_9PHAE2.230e-5140.65DDE Tnp4 domain-containing protein n=4 Tax=Ectocar... [more]
A0A6H5JVS8_9PHAE6.530e-5040.25DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1030contigP-littoralis_Contig1030:68403..69926 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog4792.ETI53028
PFAMsDDE_Tnp_4
Model size738
Max annot lvl4776|Peronosporales
Hectar predicted targeting categoryother localisation
Exons2
Evalue4.28e-27
EggNOG OGsKOG4585@1|root,KOG4585@2759|Eukaryota,3QI3U@4776|Peronosporales
Descriptionnuclease activity
Cds size441
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789370.0962133-CDS-P-littoralis_Contig1030:68402..686871680789370.0962133-CDS-P-littoralis_Contig1030:68402..68687Pylaiella littoralis U1_48CDSP-littoralis_Contig1030 68403..68687 -
1680789370.109716-CDS-P-littoralis_Contig1030:69473..696291680789370.109716-CDS-P-littoralis_Contig1030:69473..69629Pylaiella littoralis U1_48CDSP-littoralis_Contig1030 69474..69629 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789370.1288018-UTR-P-littoralis_Contig1030:69629..699261680789370.1288018-UTR-P-littoralis_Contig1030:69629..69926Pylaiella littoralis U1_48UTRP-littoralis_Contig1030 69630..69926 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1030.25.1prot_P-littoralis_Contig1030.25.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1030 68403..69629 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1030.25.1

>prot_P-littoralis_Contig1030.25.1 ID=prot_P-littoralis_Contig1030.25.1|Name=mRNA_P-littoralis_Contig1030.25.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=147bp
MYEQRSTNGVIKRCVGAMDGLFVRLVQPSLRRHANPCSFYSGHKKGFGLN
FQGVCNARYEITAWTMNCPGSQNDRTAFKHSGFDNLIDTLPDGCFIVGDA
AYPPSHRVLVPYPGTAISRSQDAYNFYQSQARISIEQAFGILVSDLN
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mRNA from alignment at P-littoralis_Contig1030:68403..69926-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1030.25.1 ID=mRNA_P-littoralis_Contig1030.25.1|Name=mRNA_P-littoralis_Contig1030.25.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1524bp|location=Sequence derived from alignment at P-littoralis_Contig1030:68403..69926- (Pylaiella littoralis U1_48)
AAACGCTTCCGTATGGACTACACTGAGTTCACAGCTCTCGCAGACATTCT GCGCCCGAAGCTGGAGAGGGACCAGCAGCAGGGTGAACGGCCCGGTGGTG CCGTGGACGTTGAGTTTCAACTGGCGATGACCCTTCGTTTCTTGGCGGGT GGTAGCGTCTTTGAGGTCATGGATAGCAACGTAATCGGCAAGAGCACGGC GTACGCCATAGTGCACCGCGTAGTCGACGCCATCAACCAGTCACGAGAAC TGGAGTGTAGCTGGCCGCAAGGTGAAGACGCAGCACGGTAGTGTTTGATG TACGAACAAAGGAGCACAAACGGTGTCATCAAGAGGTGTGTTGGAGCGAT GGACGGGTTGTTCGTGCGTCTTGTTCAGCCGAGCCTCAGAAGGCACGCGA ACCCGTGCTCGTTTTATAGCGGGCACAAGAAGGGGTTCGGGTTGAACTTC CAGGTGTGTTTGTTTATCATCGACGTTTGCAGATCAGGTTAGGGCAGAAC CAGCGAAAAGCATGGCATCAGTAATCATTGATGAATTAGGTTTGGCGCCG CCGCAGCAGGGAGTGTGGCAGCAGTAGCAGCAGAACGAGCAGCAAAACCG TGCAGGCAAGTACCAGTGGCAGCAGAGGGAAAAAAAGCAACAAGAGCAGG AACTTTGAACTCCCTGCGATACTCTCAAGCTTTCCGTTATTGTGCAGCGG TAGCCGCAAAGTCCAACACAATTAATTGTACTCGGGTACGAACGATACCA GGTATATGCGTCTGCAGACGTGGCAGAGTCCAAAATCATACGATAAATTG CACTTCAAAGGACGTGACTTCGAGTATTTGTGTCGTGCAGCAGCGCCGAC GTCCAACACAACCAACTGCACCTGGTGCAACACTTAAAAAGAAGGAGATT GTACAGCTGTCGTACGGTTGGTCACTAATCATAGTACGATGTCATTAGAG CGACGCATGTACCCAGTGCGAAGGCGCAGTCGCCAATAACGTGGTTTTCA TTTTTGTGGTGAACCACCCGCTACCCCAGACGTCACCGTTTGTTTTCGTA GCATTGTGGCAGCACGCACACCCAATACATCAGCGATGTTATTATCATGT TTGATGGGAAAATTGTAACACTTACGCAGTGATTCCAGTGTATACTTGTC ACGAAGCGCCCGTAGCACTACCGTGTACATTTCGACTTTCACGCTGGTTG ACGCACGCCGCCTCTGTCATCGGTCCACACACAATCCAGGGGGTCTGCAA CGCGCGCTACGAGATCACCGCCTGGACGATGAACTGTCCCGGTAGCCAGA ACGACCGCACGGCGTTCAAACACTCGGGGTTCGACAACCTCATTGACACG CTGCCCGACGGCTGCTTCATCGTTGGCGACGCGGCGTATCCTCCGTCGCA CCGGGTGCTCGTACCCTACCCCGGGACTGCTATTAGTCGCAGCCAAGACG CCTACAACTTCTACCAATCGCAGGCCAGGATCTCGATTGAACAGGCGTTC GGAATACTGGTGAGTGACTTGAAT
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Coding sequence (CDS) from alignment at P-littoralis_Contig1030:68403..69926-

>mRNA_P-littoralis_Contig1030.25.1 ID=mRNA_P-littoralis_Contig1030.25.1|Name=mRNA_P-littoralis_Contig1030.25.1|organism=Pylaiella littoralis U1_48|type=CDS|length=441bp|location=Sequence derived from alignment at P-littoralis_Contig1030:68403..69926- (Pylaiella littoralis U1_48)
ATGTACGAACAAAGGAGCACAAACGGTGTCATCAAGAGGTGTGTTGGAGC
GATGGACGGGTTGTTCGTGCGTCTTGTTCAGCCGAGCCTCAGAAGGCACG
CGAACCCGTGCTCGTTTTATAGCGGGCACAAGAAGGGGTTCGGGTTGAAC
TTCCAGGGGGTCTGCAACGCGCGCTACGAGATCACCGCCTGGACGATGAA
CTGTCCCGGTAGCCAGAACGACCGCACGGCGTTCAAACACTCGGGGTTCG
ACAACCTCATTGACACGCTGCCCGACGGCTGCTTCATCGTTGGCGACGCG
GCGTATCCTCCGTCGCACCGGGTGCTCGTACCCTACCCCGGGACTGCTAT
TAGTCGCAGCCAAGACGCCTACAACTTCTACCAATCGCAGGCCAGGATCT
CGATTGAACAGGCGTTCGGAATACTGGTGAGTGACTTGAAT
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