prot_P-littoralis_Contig185.9.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig185.9.1
Unique Nameprot_P-littoralis_Contig185.9.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length87
Homology
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BLAST of mRNA_P-littoralis_Contig185.9.1 vs. uniprot
Match: D7G2E5_ECTSI (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2E5_ECTSI)

HSP 1 Score: 78.2 bits (191), Expect = 4.180e-15
Identity = 32/42 (76.19%), Postives = 37/42 (88.10%), Query Frame = 0 
Query:   46 MWFWAHVGFIHTLGRLALDDTPTHLPTRDIFEFLSAQDCVNF 87
            MWFWAH+GFI+T+GRL +DDT T LP RDIF FLSAQDC+NF
Sbjct:    1 MWFWAHIGFIYTVGRLPIDDTATPLPARDIFTFLSAQDCINF 42
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BLAST of mRNA_P-littoralis_Contig185.9.1 vs. uniprot
Match: A0A6H5JS57_9PHAE (DDE Tnp4 domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS57_9PHAE)

HSP 1 Score: 71.6 bits (174), Expect = 1.090e-12
Identity = 35/70 (50.00%), Postives = 48/70 (68.57%), Query Frame = 0 
Query:   18 LRLKERIARKNRALAFLQLRTAAALHSQMWFWAHVGFIHTLGRLALDDTPTHLPTRDIFEFLSAQDCVNF 87
            LR+++RIARK RAL  +Q + + +L++ MWF +H   I+TLGRLA+DD PT    R +  F S QDCV F
Sbjct:   50 LRIRDRIARKKRALLPMQWQQSYSLYTSMWFASHFAVIYTLGRLAIDDIPTGAARRHVDNFFSPQDCVEF 119
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BLAST of mRNA_P-littoralis_Contig185.9.1 vs. uniprot
Match: A0A6H5JK48_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK48_9PHAE)

HSP 1 Score: 57.0 bits (136), Expect = 2.610e-8
Identity = 25/54 (46.30%), Postives = 36/54 (66.67%), Query Frame = 0 
Query:   34 LQLRTAAALHSQMWFWAHVGFIHTLGRLALDDTPTHLPTRDIFEFLSAQDCVNF 87
            +Q + + + ++ MWF ++V  I+TLGRLA+DD PT    RD+  F S QDCV F
Sbjct:    1 MQWQQSCSRYTSMWFASYVAVIYTLGRLAIDDIPTGAARRDVDNFFSPQDCVEF 54
[Close]
BLAST of mRNA_P-littoralis_Contig185.9.1 vs. uniprot
Match: A0A6H5JM46_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM46_9PHAE)

HSP 1 Score: 49.3 bits (116), Expect = 8.070e-5
Identity = 24/43 (55.81%), Postives = 28/43 (65.12%), Query Frame = 0 
Query:   46 MWFWAHVGFIH-TLGRLALDDTPTHLPTRDIFEFLSAQDCVNF 87
            MWF +HV  I+ TLG LA+DD PT    RD+  F S QDCV F
Sbjct:    1 MWFASHVAVIYITLGLLAIDDIPTGAARRDVDNFFSPQDCVEF 43
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig185.9.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G2E5_ECTSI4.180e-1576.19DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JS57_9PHAE1.090e-1250.00DDE Tnp4 domain-containing protein n=4 Tax=Ectocar... [more]
A0A6H5JK48_9PHAE2.610e-846.30Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JM46_9PHAE8.070e-555.81DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 17..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig185contigP-littoralis_Contig185:80320..80580 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig185.9.1mRNA_P-littoralis_Contig185.9.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig185 80320..80581 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig185.9.1 ID=prot_P-littoralis_Contig185.9.1|Name=mRNA_P-littoralis_Contig185.9.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=87bp
RKAALLFQSRGCVIMARLRLKERIARKNRALAFLQLRTAAALHSQMWFWA
HVGFIHTLGRLALDDTPTHLPTRDIFEFLSAQDCVNF
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