mRNA_P-littoralis_Contig184.51.1 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig184.51.1 vs. uniprot
Match: D8LRE7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRE7_ECTSI) HSP 1 Score: 426 bits (1094), Expect = 1.870e-125 Identity = 249/553 (45.03%), Postives = 313/553 (56.60%), Query Frame = 3
Query: 795 WNNCGLQDALVRLGRSVTLHLPTAAVDGSLRPPGTRGGD------------------------AAVLPPPRVVAAQFRERFPEAPFCRPVESVEVRALAAMRPSSATAAMKKRAKKGGEVMDMEMLDDLLREAAMAVFATIHVVVIVYLLEVVFFEDLVKLKCFQVETASGR-GVMMICPGCKTNKYVVTPGHSGGGYPSLNSDRVRVAHDVCGVVMPIFGRYSCKNPKCSLVIDSAKKAARKAKKD----VDATVWDEKTVLAFCPKNGVSFNTMDERYMKLLPKEVVSQLPVRFFKQGGVSEGLLDRLRATGGDMQPVHRILTAGNQGQELRDIHRYLRFVTGRQAIERQQQQAIEMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIKKKDEPYPRWPTWKFNRSTLTSTPSIATLNTFYKAGHEEEKGHMLRELLSQCFGEFLNMDGTFRVAGRVMDAAECIFFVLGEDAKVHGYAAIMSESKEQLLPFLARYAERRRRHGTLAALRWLYDDLCCK 2366
W N LQ AL R ++V LPT A DG L P T AA P P VAA FRE+FP+AP C PVE VE RA AAM P++ATAAM + A GG M +LLREAAMA FATIHV V +Y+ E V+T G GV MICP C TN++V TPG SG G+PS++S ++RVAHD+ GVV+P+FG+Y CKNP C+L + SA+++A KA+K+ VWD+ V + C KNGVSFNTMD RYM+LLP VV++LP RFFKQ G SE LLD + AT GD HR+L A QGQELRD+ RY+RF QA ER+ + D + +WP W+FNR TL STPS+A LNT KA H +++ HMLREL++Q GEF+N DGTFR AG+VM+ A+C++F++GEDAK+ GY A+ SES+E+L RYA+RRR+ GTL ALRWLYDD CC+
Sbjct: 120 WRNDILQVALARHAKAVQRFLPTIAPDGQLIPAKTPAAXXXXXXXXXXXXXXXXXXXXXXXXPAARHPSPAAVAAAFREKFPQAPLCTPVEGVEARARAAMHPTAATAAMSRAATDGGADMG-----ELLREAAMAAFATIHVAVALYVHE--------------VKTNGGEVGVRMICPSCLTNEFVETPGVSGNGFPSVSSQKIRVAHDIHGVVVPVFGKYRCKNPACALNVRSARQSAEKAEKNGGPKASEIVWDDAAVTSHC-KNGVSFNTMDTRYMQLLPAAVVAKLPYRFFKQNGTSERLLDMVSATEGDTPGFHRLLVAREQGQELRDMQRYIRFAEEEQARERR-----------------------------------------------------------------------SRLDGEFTKWPGWRFNRGTLISTPSVAVLNTINKAAHLQDRDHMLRELIAQVAGEFVNSDGTFRAAGKVMNEAQCLYFLMGEDAKILGYGAVKSESEEELTLLFQRYADRRRKKGTLHALRWLYDDRCCR 581
BLAST of mRNA_P-littoralis_Contig184.51.1 vs. uniprot
Match: D7FLQ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLQ5_ECTSI) HSP 1 Score: 410 bits (1055), Expect = 3.810e-123 Identity = 232/493 (47.06%), Postives = 294/493 (59.63%), Query Frame = 3
Query: 906 GDAAVLPPPRVVAAQFRERFPEAPFCRPVESVEVRALAAMRPSSATAAMKKRAKKGGEVMDMEMLDDLLREAAMAVFATIHVVVIVYLLEVVFFEDLVKLKCFQVETASGR-GVMMICPGCKTNKYVVTPGHSGGGYPSLNSDRVRVAHDVCGVVMPIFGRYSCKNPKCSLVIDSAKKAARKAKKD----VDATVWDEKTVLAFCPKNGVSFNTMDERYMKLLPKEVVSQLPVRFFKQGGVSEGLLDRLRATGGDMQPVHRILTAGNQGQELRDIHRYLRFVTGRQAIERQQQQAIEMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIKKKDEPYPRWPTWKFNRSTLTSTPSIATLNTFYKAGHEEEKGHMLRELLSQCFGEFLNMDGTFRVAGRVMDAAECIFFVLGEDAKVHGYAAIMSESKEQLLPFLARYAERRRRHGTLAALRWLYDDLCCKG 2369
G AA P P VAA FRE+FP+AP C PVE VE RA AM P++ATAAM + A GG M +LLREAAMA FATIHV V +Y+ E V+T G GV MICP C TN++V TPG SG G+PS++S ++RVAHD+ GVV+ +FG+Y CKNP C+L + SA+K+A KA+K+ VWD+ V + C KNGV+FNTMD RYM+LLP VV++LP RFFKQ SE LLD + AT GD HR+L A +QGQELRD+ RY+RF QA ER+ + D + +WP W+FNR TL STPS+A LNT KA H +++ HMLREL++Q GEF+N DGTFR AG+VMD A+C++F++GEDAK+ GY A+ SES+E+L RYA+RRR+ GTL ALRWLYDD CC+G
Sbjct: 79 GPAARHPSPAAVAAAFREKFPQAPLCTPVEGVEARARVAMHPTAATAAMSRAATDGGADMG-----ELLREAAMAAFATIHVAVALYVHE--------------VKTNGGEVGVRMICPSCLTNEFVETPGVSGNGFPSVSSQKIRVAHDIHGVVVHVFGKYRCKNPACALNVRSARKSAEKAEKNGGPKASEIVWDDAAVTSHC-KNGVAFNTMDTRYMQLLPAAVVAKLPYRFFKQNITSERLLDMVSATEGDTPGFHRLLVARDQGQELRDMQRYIRFAEEEQARERR-----------------------------------------------------------------------SRLDGEFTKWPGWRFNRGTLISTPSVAVLNTINKAAHLQDRDHMLRELIAQVAGEFVNSDGTFRAAGKVMDEAQCLYFLMGEDAKILGYGAVKSESEEELTLLFQRYADRRRKKGTLHALRWLYDDRCCRG 480
BLAST of mRNA_P-littoralis_Contig184.51.1 vs. uniprot
Match: D8LRE6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRE6_ECTSI) HSP 1 Score: 358 bits (918), Expect = 2.030e-109 Identity = 221/545 (40.55%), Postives = 283/545 (51.93%), Query Frame = 3
Query: 744 DEGEPEEGEAKADDPHRWNNCGLQDALVRLGRSVTLHLPTAAVDGSLRPPGTRGGDAAVLPPPRVVAAQFRERFPEAPFCRPVESVEVRALAAMRPSSATAAMKKRAKKGGEVMDMEMLDDLLREAAMAVFATIHVVVIVYLLEVVFFEDLVKLKCFQVETASGRGVMMICPGCKTNKYVVTPGHSGGGYPSLNSDRVRVAHDVCGVVMPIFGRYSCKNPKCSLVIDSAKKAARKAKKDVDATVWDEKTVLAFCPKNGVSFNTMDERYMKLLPKEVVSQLPVRFFKQGGVSEGLLDRLRATGGDMQPVHRILTAGNQGQELRDIHRYLRFVTGRQAIERQQQQAIEMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIKKKDEPYPRWPTWKFNRSTLTSTPSIATLNTFYKAGHEEEKGHMLRELLSQCFGEFLNMDGTFRVAGRVMDAAECIFFVLGEDAKVHGYAAIMSESKEQLLPFLARYAERRRRHGTLAALRWLYDDLCCKGGPE 2378
DE PE+ EA D +RWNN GLQDA+ R +++ +LPT DGSL PPGTRG + + PR+ AA F+ RFP +P C+P+ESVE RA+ AM+PS+AT AM+ R KK E L LREAAMA FATI V + Y+ EV+FFE+LV+ F+V T G GV MICPGCK+NK+V PG SG G+P + + ++RVAHDV GVV+P+ GRY+C P C L ++SAK++A + K V WDE T+ CP NGVSFNTMDE +QQ IE K P P WP WKFNRS++T+TPS+A LNT Y AGHEE+KGHM RELLS G+F+N DG++R+ GR A C++ ++ EDAK+H Y A+ SESK + LP RYAERRRR GTL L+W+ DDLCC+G +
Sbjct: 29 DEEAPEK-EATDRDAYRWNNRGLQDAMSRAVKAILQYLPTITGDGSLLPPGTRGRGSDNVRSPRLEAAAFKRRFPNSPVCKPLESVETRAIEAMQPSAATGAMQDRPKKD------EDLGHRLREAAMATFATIDVEIAPYVHEVIFFEELVRDDRFKVNTRGGAGVRMICPGCKSNKFVKPPGVSGHGFPCMGA-KLRVAHDVAGVVVPVTGRYACLGPGCPLRLESAKRSAARKKSVVADDGWDEDTIKKHCP-NGVSFNTMDES-------------------------------------------------------------------------KQQEIERKAGRG----------------------------------------------------------------PTP-WPPWKFNRSSITATPSVAVLNTIYAAGHEEDKGHMHRELLSLVDGQFVNADGSYRLIGRANHDAHCLYSLMREDAKIHAYGALKSESKVETLPLYKRYAERRRRSGTLTTLQWIIDDLCCRGAKD 426
BLAST of mRNA_P-littoralis_Contig184.51.1 vs. uniprot
Match: A0A6H5L4Z6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Z6_9PHAE) HSP 1 Score: 286 bits (731), Expect = 8.050e-81 Identity = 140/228 (61.40%), Postives = 168/228 (73.68%), Query Frame = 1
Query: 2590 MTEEESGLRARSRAMALYERTFSRPTDVTIADLKKVMAVHEQLDSTGLRRGELPLLRPELPPGKSGPKGARSVLNRLISCLRKGCGADPLDVDNMYLPLGKGPKTGLMKWSKKGGTGKNENFHGGINRIVAGRSRLGAEICDARLAQRVHAHNHNMDCKHGRTDKQSTLWVWRERDVNNAAKECSIVVPFPKAGPRPEVAEEDYEPMGFEYAKQRRKDDLRACANNAA 3273
M E E+ + A+ RA + + RT+SRP DL K + + +LD + R ELPLLRP+LPPGKSGP GA + LN+L+ CLR+GCG DP DV+ MY+PLG+GPKTGLM+WSKKGGTGKNENFHGGINR+V G +RLGAE CDARL QR+H HNH+MD K GRT KQSTLWVWRER N AA+ PFP+AG P VA ED+EPMGFEYA+QRR + L AA
Sbjct: 1 MLEMEAEVMAKKRAWSPFVRTYSRPAQEVEDDLVKYVGDYVKLDQAAIARKELPLLRPDLPPGKSGPIGAMAALNKLVKCLREGCGQDPFDVNQMYIPLGRGPKTGLMRWSKKGGTGKNENFHGGINRLVNGVARLGAEACDARLLQRIHRHNHDMDRKLGRTSKQSTLWVWRERKANAAAESILTSRPFPRAGDTPTVAAEDFEPMGFEYAEQRRANALTNAKTAAA 228
BLAST of mRNA_P-littoralis_Contig184.51.1 vs. uniprot
Match: A0A6H5KXX1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXX1_9PHAE) HSP 1 Score: 226 bits (576), Expect = 2.960e-62 Identity = 177/546 (32.42%), Postives = 232/546 (42.49%), Query Frame = 3
Query: 741 DDEGEPEEGEAKADDPHRWNNCGLQDALVRLGRSVTLHLPTAAVDGSLRPPGTRGGDAAVLPPPRVVAAQFRERFPEAPFCRPVESVEVRALAAMRPSSATAAMKKRAKKGGEVMDMEMLDDLLREAAMAVFATIHVVVIVYLLEVVFFEDLVKLKCFQVETASGRGVMMICPGCKTNKYVVTPGHSGGGYPSLNSDRVRVAHDVCGVVMPIFGRYSCKNPKCSLVIDSAKKAARKAKKDVDATVWDEKTVLAFCPKNGVSFNTMDERYMKLLPKEVVSQLPVRFFKQGGVSEGLLDRLRATGGDMQPVHRILTAGNQGQELRDIHRYLRFVTGRQAIERQQQQAIEMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIKKKDEPYPRWPTWKFNRSTLTSTPSIATLNTFYKAGHEEEKGHMLRELLSQCFGEFLNMDGTFRVAGRVMDAAECIFFVLGEDAKVHGYAAIMSESKEQLLPFLARYAERRRRHGTLAALRWLYDDLCCKGGPE 2378
D E PEE EAK D RW N LQ A+V+ R+V LP A +G+L PP PP+ VAA F RFP+AP CRP +S+E RA AAM+ + T AM R + G E++D LL+E+ MAVFAT VV +Y+ EVVF E+LV G P++ + +C LV++SAKKAA K K + WDE T+ CP NG SF TMD+RYM+L P+E+VS+LP R+F+Q G SE LLD++RAT GD+Q + R + S + + SQ G+FL MDGT+R+ RV+D+ +C+FF+LGEDAKVH Y A+ SE KE++ L RYAERRRR+GTL AL WLYD LCC+G +
Sbjct: 9 DGEEAPEE-EAKEGDRKRWMNVELQTAIVKQARTVLDTLPKIAGNGTLTPPQWMKERHL---PPKYVAAAFNRRFPDAPICRPADSLEKRAAAAMKAAKVTPAMSARVENG------EIIDVLLKESVMAVFATTQVVFALYVHEVVFLEELV------------------------------------GIPAIQA-------------------------RCPLVLESAKKAANKKKVVIADDGWDEATIREHCP-NGGSFTTMDDRYMQLPPEEIVSRLPFRYFRQNGTSETLLDQVRATEGDLQDKEHM-------------------------------------------------------------------------------------------------------------------QRESTRSMGGSSCAXRIH----------------SQYRGQFLCMDGTWRIGLRVIDSPDCLFFLLGEDAKVHAYGAVQSERKEEIYLLLKRYAERRRRNGTLLALEWLYDYLCCRGADD 351
BLAST of mRNA_P-littoralis_Contig184.51.1 vs. uniprot
Match: A0A6H5JB16_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB16_9PHAE) HSP 1 Score: 243 bits (619), Expect = 6.090e-62 Identity = 116/174 (66.67%), Postives = 134/174 (77.01%), Query Frame = 1
Query: 2752 LLRPELPPGKSGPKGARSVLNRLISCLRKGCGADPLDVDNMYLPLGKGPKTGLMKWSKKGGTGKNENFHGGINRIVAGRSRLGAEICDARLAQRVHAHNHNMDCKHGRTDKQSTLWVWRERDVNNAAKECSIVVPFPKAGPRPEVAEEDYEPMGFEYAKQRRKDDLRACANNAA 3273
+L LP KSGP GA + LN+L+ CLRKGCG DPLDVD +Y+PLG+GPKTGLM+WSKKGGTGKNENFHGGINR+V G +RLGAE CDARL QR+H HNH+MD K GRT KQSTLWVWRER N AA+ PFP+AG P VA ED+EP+GFEYA+QRR + L AA
Sbjct: 1271 ILTKALPRSKSGPIGAMAALNKLVKCLRKGCGQDPLDVDQVYIPLGRGPKTGLMRWSKKGGTGKNENFHGGINRLVNGVARLGAEACDARLLQRIHRHNHDMDRKLGRTSKQSTLWVWRERKANAAAESILTSRPFPRAGDTPTVAAEDFEPIGFEYAEQRRANALTHAKTAAA 1444
BLAST of mRNA_P-littoralis_Contig184.51.1 vs. uniprot
Match: A0A6H5JZ63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ63_9PHAE) HSP 1 Score: 226 bits (576), Expect = 6.120e-61 Identity = 165/529 (31.19%), Postives = 222/529 (41.97%), Query Frame = 3
Query: 927 PPRVVAAQFRERFPEAPFCRPVESVEVRALAAMRPSSATAAMKKRAKKGGEVMDMEMLDDLLREAAMAVFATIHVVVIVYLLEVVFFEDLVKLKCFQVETASGRGVMMICPGCKTNKYVVTPGHSGGGYPSLNSDRVRVAHDVCGVVMPIFGRYSCKNPKCSLVIDSAKKAARKAKKDVDATVWDEKTVLAFCPKNGVSFNTMDERYMKLLPKEVVSQLPVRFFKQGGVSEGLLDRLRATGGDMQPVHRILTAGNQGQELRDIHRYLRFVTGRQAIERQQQQAIEMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIKKKDEPYPRWPTWKFNRSTLTSTPSIATLNTFYKAGHEEEKG---------------------------------------------HMLRELLSQCFGEFLNMDGTFRVAGRVMDAAECIFFVLGEDAKVHGYAAIMSESKEQLLPFLARYAERRRRHGTLAALRWLYDDLCCKGGPE 2378
PP+ VAA F FP AP CRP ++ E RA AAM+ + T AM+ R KG E++D LL+E AMAVFA V+ +Y+ EVV+ ++V +GV MICPGCK+N V PG SG G+P+ + + V + + R KC + ++ + + WDE T+ P NG S TMD+R+ G QG+ELR++HRY+RF A K + + WP WKF+R TL STPSI LNT YKAGH++ +G HM RE+ SQ +G+FL MDGT+R+ RV+D+ +C+FF+LGEDAKVH A+ SE KE++ L RYAERRRR+GTL AL W YDDLCC+G +
Sbjct: 7 PPKYVAAAFNRHFPGAPICRPADNPEKRAAAAMKAAKVTPAMRSRIGKG------EIMDVLLKEPAMAVFAMTQVMFALYVHEVVYVHEVVT------TPGGAKGVRMICPGCKSNSEVKPPGVSGHGFPNAGAHKASSTFAVFLHGLRVPSRLG----KCQ-------EGGQQKRVVIANDGWDEATIREHGP-NGASLTTMDDRH----------------------------------------------GEQGRELREMHRYIRF-------------------------------------------------------------------------------AAKHRSAEHALWPGWKFSRGTLISTPSIVVLNTIYKAGHDDVRGGSVDTFLVLVRFLVSARVLFRRVQILLCRHTDHNVVFCRHPQDKEHMQREIHSQYWGQFLCMDGTWRIGLRVIDSPDCLFFLLGEDAKVHAGGAVQSERKEEIYLLLKRYAERRRRNGTLLALEWFYDDLCCRGADD 386
BLAST of mRNA_P-littoralis_Contig184.51.1 vs. uniprot
Match: A0A6H5KMP1_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMP1_9PHAE) HSP 1 Score: 219 bits (559), Expect = 6.370e-58 Identity = 111/205 (54.15%), Postives = 134/205 (65.37%), Query Frame = 1
Query: 2716 LDSTGLRRGELPLLRPELPPGKSGPKGARSVLNRLISCLRKGCGADPLDVDNMYLPLGKGPKTGLMKWSKKGGTGKNENFHGGINRIVAGRSRLGAEICDARLAQRVHAHNHNMDCKHGRTDKQSTLWVWRERDVNNAAKECSIVVPFPKAGPRP----------------EVAEEDYEPMGFEYAKQRRKDDLRACANNAAMMV 3282
+D+ + RG +PLLRP+ PPGKSGP GA + L ++ CLRKGC DPL VD+MY+P G+GPKT LM+WSKKGGTGKNENFHGGINR+VAG +R+G E CDARL QRV HN +MD K G T KQST W WRER VN AA +PFPKA P P ++ +D EPMGFE+ R+ R N A +V
Sbjct: 1 MDADDVARGGIPLLRPDAPPGKSGPTGAMAALEKMRRCLRKGCAQDPLGVDDMYIPRGRGPKTNLMRWSKKGGTGKNENFHGGINRLVAGVARIGVEACDARLLQRVCRHNLDMDRKLGNTSKQSTRWPWRERVVNKAASGILASLPFPKAPPDPKHDVCDANSLLFVCRCQIPTKDLEPMGFEFHTARKAAGRREAMNAATRIV 205
BLAST of mRNA_P-littoralis_Contig184.51.1 vs. uniprot
Match: A0A6H5KAB7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAB7_9PHAE) HSP 1 Score: 183 bits (464), Expect = 1.990e-47 Identity = 165/527 (31.31%), Postives = 209/527 (39.66%), Query Frame = 3
Query: 801 NCGLQDALVRLGRSVTLHLPTAAVDGSLRPPGTRGGDAAVLPPPRVVAAQFRERFPEAPFCRPVESVEVRALAAMRPSSATAAMKKRAKKGGEVMDMEMLDDLLREAAMAVFATIHVVVIVYLLEVVFFEDLVKLKCFQVETASG-RGVMMICPGCKTNKYVVTPGHSGGGYPSLNSDRVRVAHDVCGVVMPIFGRYSCKNPKCSLVIDSAKKAARKAKKDVDATVWDEKTVLAFCPKNGVSFNTMDERYMKLLPKEVVSQLPVRFFKQGGVSEGLLDRLRATGGDMQPVHRILTAGNQGQELRDIHRYLRFVTGRQAIERQQQQAIEMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIKKKDEPYPRWPTWKFNRSTLTSTPSIATLNTFYKAGHEEEKGHMLRELLSQCFGEFLNMDGTFRVAGRVMDAAECIFFVLGEDAKVHGYAAIMSESKEQLLPFLARYAERRRRHGTLAALRWLYDDLCCKGGPE 2378
N LQ A + R+V LP A +G+L PP + LPP VVAA R RFP+AP CRP +S E RA AAM+ + T AM R + G ++D LL+E MAVFAT VV +Y+ EV V T SG +GV MICPGCK+N V PG SG +P N+ + + G + K + D WDE T CP NG SF TMD+R IL AG QG+ELR+IH +RF R +ST A H R + SQC G+FL MDGT+R+ RV+D+ +C+ F+LGEDAKVH Y A+ SE KE++ L RYAERRRR+GTL AL W+YDDLCC+G +
Sbjct: 2 NVELQTAFAKQARTVLDTLPKIAGNGTLTPPQWK--KERHLPPKYVVAALNR-RFPDAPICRPADSPEKRAAAAMKAAKVTPAMSTRVENGA------IIDVLLKELVMAVFATTQVVFALYVHEV-------------VTTPSGAKGVRMICPGCKSNSEVKPPGVSGHDFP--NAGAQKASRTFAGTLSSWKVPRRWPTKKVVIADDG----------------WDEATSREHCP-NGASFITMDDR-------------------------------------------ILVAGEQGRELREIHWCIRF-------------------------------------------------------------------------------------------------RVLSSSTGQGA---------------HATR-IHSQCEGQFLCMDGTWRIGLRVIDSPDCLCFLLGEDAKVHSYGAVQSERKEEIYLLLNRYAERRRRNGTLLALEWVYDDLCCRGADD 331
BLAST of mRNA_P-littoralis_Contig184.51.1 vs. uniprot
Match: A0A6H5KS49_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS49_9PHAE) HSP 1 Score: 176 bits (447), Expect = 1.110e-45 Identity = 124/292 (42.47%), Postives = 157/292 (53.77%), Query Frame = 3
Query: 690 SLECSTEGEHDEVGRVEDDEGEPEEGEAKADDPHRWNNCGLQDALVRLGRSVTLHLPTAAVDGSLRPPGTRGGDAAVLPPPRVVAAQFRERFPEAPFCRPVESVEVRALAAMRPSSATAAMKKRAKKGGEVMDMEMLDDLLREAAMAVFATIHVVVIVYLLEVVFFEDLVKLKCFQVETASGRGVMMICPGCKTNKYVVTPGHSGGGYPSLNSDR------VRVAHDVCGVVMPIFGRYSCKNPKCSLVIDSAKKAARKAKKDVDATVWDEKTVLAFCPKNGVSFNTMDERY 1547
S E + E DE D E PEE EAK D RW N LQ A+V+ R+V LP A +G+L PP PP+ VAA F RFP+AP CRP +S+E RA AAM+ + T AM R + G E++D LL+E+ MAVFAT VV +Y+ EV+ +GV MI PGCK+N V PG SG +P+ + + +R DV VV+P+ GRY C C LV++SAKKAA K K V WDE T+ CP NG SF TMD+RY
Sbjct: 18 SGEYAEEDPIDEDEECVDGEEAPEE-EAKEGDRERWMNVELQTAIVKQARTVLDTLPKIAGNGTLTPPQWMKERHL---PPKYVAAAFNRRFPDAPICRPADSLEKRAAAAMKAAKVTPAMSTRVENG------EIIDVLLKESVMAVFATTQVVFALYVHEVM------------TTPGGAKGVRMIGPGCKSNSEVKPPGVSGHDFPNAGAQKAIRTFAIRAVPDVGRVVVPLAGRYFCTASGCPLVLESAKKAANKKKVVVADDGWDEATIREHCP-NGGSFTTMDDRY 286 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig184.51.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig184.51.1 >prot_P-littoralis_Contig184.51.1 ID=prot_P-littoralis_Contig184.51.1|Name=mRNA_P-littoralis_Contig184.51.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=716bp MSGSGGRRGEPVRVYEGSAQQMFTCHMCKRKKNKGEYRIAHSSEQNPHGWback to top mRNA from alignment at P-littoralis_Contig184:137321..142757+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig184.51.1 ID=mRNA_P-littoralis_Contig184.51.1|Name=mRNA_P-littoralis_Contig184.51.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=5437bp|location=Sequence derived from alignment at P-littoralis_Contig184:137321..142757+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig184:137321..142757+ >mRNA_P-littoralis_Contig184.51.1 ID=mRNA_P-littoralis_Contig184.51.1|Name=mRNA_P-littoralis_Contig184.51.1|organism=Pylaiella littoralis U1_48|type=CDS|length=2148bp|location=Sequence derived from alignment at P-littoralis_Contig184:137321..142757+ (Pylaiella littoralis U1_48)back to top |