prot_P-littoralis_Contig184.29.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig184.29.1
Unique Nameprot_P-littoralis_Contig184.29.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length346
Homology
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BLAST of mRNA_P-littoralis_Contig184.29.1 vs. uniprot
Match: A0A6H5L1T2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1T2_9PHAE)

HSP 1 Score: 93.2 bits (230), Expect = 8.160e-20
Identity = 45/90 (50.00%), Postives = 62/90 (68.89%), Query Frame = 0 
Query:  256 MHEAQQVATIADIRATVTELLRLAQLDSSLDEERKFMADLEAGLDHSMMTGQLGIAAVWFHDKMMSSSEEGQQVDRARIVKELSHISKFM 345
            M   Q+ A + D+ + + ELLRL  LD SL  ERKF+A L+ G+ H++   Q   A +W H K+MSSSEEGQQVDRA ++KELS ++KF+
Sbjct:    1 MQMQQKAAILHDVSSMLAELLRLPMLDGSLSTERKFVATLDEGVKHALQGKQYDAAGMWLHGKLMSSSEEGQQVDRALLIKELSGVAKFI 90
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BLAST of mRNA_P-littoralis_Contig184.29.1 vs. uniprot
Match: A0A6H5K7C0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7C0_9PHAE)

HSP 1 Score: 86.3 bits (212), Expect = 2.420e-15
Identity = 48/110 (43.64%), Postives = 70/110 (63.64%), Query Frame = 0 
Query:  236 FKASWSTLLHKAPMCLQIPTMHEAQQVATIADIRATVTELLRLAQLDSSLDEERKFMADLEAGLDHSMMTGQLGIAAVWFHDKMMSSSEEGQQVDRARIVKELSHISKFM 345
            FKA+WSTLL    +   I       +   I +I+  + EL R+  LD+SL EE+ F+ +   GL+ ++ + Q+   AVW HDK+MS++EEGQ+ DR +IVKELS ISKF+
Sbjct:  108 FKATWSTLL---TLISGITAFGRHDKHNRIQEIQRVLAELERVLALDTSLVEEKVFVHNRVVGLETAVRSNQIDSGAVWVHDKLMSTTEEGQKTDRDQIVKELSSISKFL 214
[Close]
BLAST of mRNA_P-littoralis_Contig184.29.1 vs. uniprot
Match: A0A6H5JHN8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHN8_9PHAE)

HSP 1 Score: 78.6 bits (192), Expect = 1.820e-13
Identity = 39/84 (46.43%), Postives = 59/84 (70.24%), Query Frame = 0 
Query:  262 VATIADIRATVTELLRLAQLDSSLDEERKFMADLEAGLDHSMMTGQLGIAAVWFHDKMMSSSEEGQQVDRARIVKELSHISKFM 345
            + +  +I+  + EL RL  LD+SL EE+ F+ +L  GL+ ++ + Q+   AVW HDK+MS++EEGQ+ DR + VKELS ISKF+
Sbjct:   78 IYSFREIQRVLAELERLLALDTSLVEEKVFVHNLVVGLETAVRSNQIDSGAVWVHDKLMSTTEEGQKTDRDQKVKELSSISKFL 161
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig184.29.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L1T2_9PHAE8.160e-2050.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K7C0_9PHAE2.420e-1543.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHN8_9PHAE1.820e-1346.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 142..186

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig184contigP-littoralis_Contig184:76415..79221 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig184.29.1mRNA_P-littoralis_Contig184.29.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig184 76018..79221 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig184.29.1 ID=prot_P-littoralis_Contig184.29.1|Name=mRNA_P-littoralis_Contig184.29.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=346bp
MSVLAIDMAAATAPPSMDAITQLCTETDAQNVSVWMPAKIAMGAGPRSAA
DLDLEDVVASVVQLAGAGDAPDPPKVFTIGMNARGEGGSVATVELRQKRA
LCQSLVEYLWRCTGNGGLKIGSGFLILPSAFPPIPPVSSGVGGGAAGPGL
PPQAPGLGGAAGGPSDPAEVGSADGGGSAAAPGSRKRTLAELHAAVDELS
ERQSLADGLGQPAERDAVATPPARRPMTYVSIPDKFKASWSTLLHKAPMC
LQIPTMHEAQQVATIADIRATVTELLRLAQLDSSLDEERKFMADLEAGLD
HSMMTGQLGIAAVWFHDKMMSSSEEGQQVDRARIVKELSHISKFMG
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