prot_P-littoralis_Contig183.87.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig183.87.1
Unique Nameprot_P-littoralis_Contig183.87.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length404
Homology
BLAST of mRNA_P-littoralis_Contig183.87.1 vs. uniprot
Match: A0A835Z7B0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7B0_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 5.280e-11
Identity = 36/50 (72.00%), Postives = 38/50 (76.00%), Query Frame = 0
Query:  214 LTTEHIKSRLQKYRLHAHRSKDEFLEFFNLRLEDKFTDFLQTEGWRKLPP 263
            LTTEHIKS LQKYRLH  RSKDEFLEFF LRL++KF  F     WR LPP
Sbjct:  163 LTTEHIKSHLQKYRLHYARSKDEFLEFFELRLKEKFGTFCAGHMWRNLPP 212          
BLAST of mRNA_P-littoralis_Contig183.87.1 vs. uniprot
Match: A0A7S4D6B3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D6B3_HETAK)

HSP 1 Score: 63.5 bits (153), Expect = 6.710e-8
Identity = 29/46 (63.04%), Postives = 36/46 (78.26%), Query Frame = 0
Query:  214 LTTEHIKSRLQKYRLHAHRSKDEFLEFFNLRLEDKFTDFLQTEGWR 259
            LTTEHIKS LQKYRLH  RSK+EFL++++  L+  F DF+  EGWR
Sbjct:   65 LTTEHIKSHLQKYRLHYTRSKEEFLQYYDSHLKRDFEDFVSQEGWR 110          
BLAST of mRNA_P-littoralis_Contig183.87.1 vs. uniprot
Match: A0A7S3HM56_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HM56_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 2.220e-7
Identity = 28/51 (54.90%), Postives = 36/51 (70.59%), Query Frame = 0
Query:  214 LTTEHIKSRLQKYRLHAHRSKDEFLEFFNLRLEDKFTDFLQTEGWRKLPPD 264
            L+TEHIKS LQKYR+H  RSKDEF +F+N  ++D F  +   EGW+ L  D
Sbjct:   97 LSTEHIKSHLQKYRIHRQRSKDEFFDFYNNYMKDAFQQWENAEGWKHLAND 147          
BLAST of mRNA_P-littoralis_Contig183.87.1 vs. uniprot
Match: A0A6S6I6H3_9STRA (Phosphorus starvation response like 1 n=1 Tax=Nannochloropsis oceanica TaxID=145522 RepID=A0A6S6I6H3_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 2.460e-5
Identity = 27/45 (60.00%), Postives = 31/45 (68.89%), Query Frame = 0
Query:  214 LTTEHIKSRLQKYRLHAHRSKDEFLEFFNLRLEDKFTDFLQTEGW 258
            LTTEHIKS LQKYRLH +RSKDEF+E+FN  +   F  F     W
Sbjct:  384 LTTEHIKSHLQKYRLHGNRSKDEFVEYFNGYMRGPFASFCARREW 428          
BLAST of mRNA_P-littoralis_Contig183.87.1 vs. uniprot
Match: A0A7R9YFR2_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YFR2_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 3.590e-5
Identity = 27/46 (58.70%), Postives = 32/46 (69.57%), Query Frame = 0
Query:  214 LTTEHIKSRLQKYRLHAHRSKDEFLEFFNLRLEDKFTDFLQTEGWR 259
            LTTEHIKS LQKYRLH  RSK+EF+E +N  L+  F  F   + WR
Sbjct:   96 LTTEHIKSHLQKYRLHHGRSKNEFMEHYNQCLKADFRAFCDKQSWR 141          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig183.87.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A835Z7B0_9STRA5.280e-1172.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S4D6B3_HETAK6.710e-863.04Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S3HM56_9STRA2.220e-754.90Hypothetical protein n=2 Tax=Spumella elongata Tax... [more]
A0A6S6I6H3_9STRA2.460e-560.00Phosphorus starvation response like 1 n=1 Tax=Nann... [more]
A0A7R9YFR2_9STRA3.590e-558.70Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 148..169
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 184..204
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 263..290
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 148..167
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 93..116

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig183contigP-littoralis_Contig183:396308..412548 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig183.87.1mRNA_P-littoralis_Contig183.87.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig183 396139..412907 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig183.87.1 ID=prot_P-littoralis_Contig183.87.1|Name=mRNA_P-littoralis_Contig183.87.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=404bp
MDSRRLQELRDVYTQLSHQSTGPDGAHAAVGAAGAGGAGGAAAAVAPPDL
LDGRRNLGVLPSPPLQAITDPVVAGAAGITASGTNSFIVSLSRHNKSSGS
APEPLVKGPGQPSSLPMPMSKGQASATLAAAAVASSAAALNALSNRHINS
SSSLPPPSSNNSTAERYHRRQLLLAGAMTGVGMFGRSSSSSSHTTTSTTQ
DGGAGAAATAAAALTTEHIKSRLQKYRLHAHRSKDEFLEFFNLRLEDKFT
DFLQTEGWRKLPPDHGCGGHQDESEYDSSGGGDGAGGEGAGGGGGGDIAL
AMYRLKLFPLGAGIPRETEGRLRLTPGWAGWATSATWVHNACGSSSTSKK
CCGCTSRRSSSSRRRYTSTSPPPLRLRLPLRPRAGLAAAAAAAGVQQQVR
RRA*
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