mRNA_P-littoralis_Contig183.76.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig183.76.1
Unique NamemRNA_P-littoralis_Contig183.76.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig183.76.1 vs. uniprot
Match: A0A6H5KY80_9PHAE (UBA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KY80_9PHAE)

HSP 1 Score: 355 bits (911), Expect = 1.140e-118
Identity = 189/252 (75.00%), Postives = 205/252 (81.35%), Query Frame = 1 
Query:   88 MFAGFGSSPVTRGILVSTLAASAVLHIRDPDGILNVTLD--VWRVLTEGELWRLLTCHTVCTSMGPLLACSLSMYRLRVLEPLLGSRKFSALVAVASALALPFEATAGVYFGTVRLTPGPIPVVFALLVVYYAIVPPSKPRYFGALGLDFSDKSFTFCVAGMLAFCDGWDSIVPAVCGALVGGLYMMDTLSIQALRLPSLVYRCFSRFCRSFTSSPSRRGGPFSGGSSPSPAPRAVRRPPRLGQALLGPSRG 837
            MFAGFGSSPVTRGIL STL ASAVLH RDP+G LNVTL   VWRVLTEGE+WRLL+CHTVCTSMGPLLA SLS+YRLR LEPLLGS+KF A  AV SALALPFEATAGVYFGTVRLTPGPIP+VFAL+VVYYAIVPPSKPRYFG LGLDFSDK+FTF VAGMLA C+GWDSIVPAVCGALVGGLY+ DT+SIQA+R P++V+RCFSR  RSF S    R G F  G                 QALL P+RG
Sbjct:    1 MFAGFGSSPVTRGILASTLVASAVLHARDPNGNLNVTLGEYVWRVLTEGEIWRLLSCHTVCTSMGPLLASSLSLYRLRALEPLLGSKKFGAFAAVTSALALPFEATAGVYFGTVRLTPGPIPLVFALVVVYYAIVPPSKPRYFGVLGLDFSDKAFTFVVAGMLASCEGWDSIVPAVCGALVGGLYLTDTMSIQAVRFPNVVHRCFSRLSRSFMSG---RRGSFFPGXXXXXXXXXXXXXXXPAQALLDPARG 249
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BLAST of mRNA_P-littoralis_Contig183.76.1 vs. uniprot
Match: A0A7S2UTJ4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UTJ4_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 4.390e-18
Identity = 75/231 (32.47%), Postives = 111/231 (48.05%), Query Frame = 1 
Query:   97 GFGSSPVTRGILVSTLAASAVLHIRDPDGILNVTLDVWRVLTEGELWRLLTCHTVCTSMGPLLACSLSMYRLRVLEPLLGSRKFSAL----------VAVASALALPFEATAGVYFG--TVRLTPGPIPVVFALLVVYYAIVP-PSKPRYFGALGLD-FSDKSFTFCVAGMLAFCDGWDSIVPAVCGALVGGLYMMDTLS-IQALRLPSLVYRCFSRFCRSFTSSPSRRGG 744
            GFG +  T+G+ ++TL+ S +  +  P     + LD+ R+ + GE+WRL T     +S+G L+     +Y  R+ E  +G+ KF+A           + V S L LP     G   G   +R  PGP   +F+  V+YYA +P P  P   GA  +  FSDKSF +     LA   G  S++ A+CGA  G LY +     ++ L LP  +     R   S    P R GG
Sbjct:    6 GFGHAVATKGLCLATLSCS-LASLTSPSLARLMHLDMTRLFSRGEVWRLFTSSLAFSSVGELVLGLSLIYTFRIFERQMGTAKFAAYALLTMGVSKGLEVLSLLLLPQYGLGGGLGGGAPLRACPGPYGFIFSSFVMYYACIPKPHPPVGSGADSVTLFSDKSFVYLFGLQLALVQGRVSVLSALCGAGAGCLYRLPGAGCLRRLALPRFIENWLQRLDSSSRPGPRRGGG 235
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BLAST of mRNA_P-littoralis_Contig183.76.1 vs. uniprot
Match: A0A8H7VUF7_9FUNG (Uncharacterized protein n=1 Tax=Thamnidium elegans TaxID=101142 RepID=A0A8H7VUF7_9FUNG)

HSP 1 Score: 90.1 bits (222), Expect = 1.940e-17
Identity = 65/208 (31.25%), Postives = 110/208 (52.88%), Query Frame = 1 
Query:   94 AGFGSSPVTRGI--LVSTLAASAVLHIRDPDGILNVTLDVWRVLTEGELWRLLTCHTVCTSMGPLLACSLSMYRLRVLEPLLGSRKFSALVA---VASALALPFEATAGVYFGTVR-LTPGPIPVVFALLVVYYAIVPPSKPRYFGALGLDFSDKSFTFCVAGMLAFCDGWDSIVPAVCGALVGGLYMMDTLSIQALRLPSLVYRCFS 699
            +GF ++PVT+ +  +V   +A A+     P     +   +  +++ G+ W+L T H    S+G  +A +  +Y+++++E   GS K++AL+    VAS L       AG  FG ++ +  GP  ++F+++  +  IVP S   + G LG + +DKSF F     L       SI+P +CG +VG +Y  D+  I+A R P  V R FS
Sbjct:    7 SGFRNAPVTKFLVPIVGGCSALALAFNAKP----QMATQLSYLMSHGQFWKLFTSHWAFGSIGTTVAGTWLIYKMKIVERRYGSSKYAALIFISFVASTLLQTGALVAGSQFGYIKSIASGPYAIIFSIIYQFQKIVPTSY--HVGMLGFNITDKSFVFIATAQLLLSSSSASIIPCLCGLVVGSMY--DSTGIKAWRFPKWV-RSFS 205
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BLAST of mRNA_P-littoralis_Contig183.76.1 vs. uniprot
Match: A0A068S933_9FUNG (CUE domain-containing protein n=2 Tax=Lichtheimia TaxID=688353 RepID=A0A068S933_9FUNG)

HSP 1 Score: 89.4 bits (220), Expect = 1.790e-16
Identity = 64/210 (30.48%), Postives = 104/210 (49.52%), Query Frame = 1 
Query:   94 AGFGSSPVTRGILVSTLAASAVLHIRDPDGILNVTLDVWRVLTEGELWRLLTCHTVCTSMGPLLACSLSMYRLRVLEPLLGSRKFSALVAVASALALPFEATA---GVYFGTVRLTPGPIPVVFALLVVYYAIVPPSKPRYFGALGLDFSDKSFTFCVAGMLAFCDGWDSIVPAVCGALVGGLYMMDTLSIQALRLPSLVYRCFSRFCRS 714
            +GF + PVT+ +++   + S +  I +   I ++ L    +    + WRL T H   T+ G L    L +Y +RV+E   GS K++A + V   +A   E  A   G   G  ++  GP  ++F+ L  Y+ ++P +    F   G+ F+DK+F F  A  +     + ++VPAVCG LVG LY  D  +I+  R P  +    SR   S
Sbjct:    7 SGFYNVPVTKFLMLFIGSCSLLASILNYKQIFHLQLSP-HITIHHQFWRLFTSHCAFTNSGELFFGLLLLYSMRVIERQFGSAKYAAFMFVTLLIATFLEIGALVSGARLGFRKIPGGPYAIIFSALYQYHRMIPVTYR--FRIFGVTFNDKTFVFVPAIQMMLSQYFSTLVPAVCGLLVGALYRSDVGNIKQWRFPLFIRSWTSRLVES 213
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BLAST of mRNA_P-littoralis_Contig183.76.1 vs. uniprot
Match: A0A8H6U3Y6_9PEZI (Uba domain-containing protein ucp14 n=4 Tax=Colletotrichum TaxID=5455 RepID=A0A8H6U3Y6_9PEZI)

HSP 1 Score: 84.7 bits (208), Expect = 2.480e-15
Identity = 64/217 (29.49%), Postives = 110/217 (50.69%), Query Frame = 1 
Query:  100 FGSSPVTRGILVSTLAASAVLHIRDPDGILNVTLD--VWRVLTEGELWRLLTCHTVCTSMGPLLACSLSMYRLRVLEPLLGSRKFSALVAVASALALPFEATAGVYFGTVRLTP-----------GPIPVVFALLVVYYAIVP----------PSKPRYFGALGLDFSDKSFTFCVAGMLAFCDGWDSIVPAVCGALVGGLYMMDTL--SIQALRLP 675
            F ++PVTR +++  +++S    + D      + +D  +WR     +LWRLLT    CT+   +L  S+++Y LRV+E + GSRK+++ + V++     F A     F ++ L P           GP P++FA+L  Y+A++P           + P     +GL FSDKS+ + +A  LA      S++ A  G ++G  +  D L  ++   RLP
Sbjct:    3 FANAPVTRTLVLGLVSSSIAASLFDIKHYFYIIVDTHLWRY---HQLWRLLTYQLCCTNSSEVLFASMTLYHLRVIEQMWGSRKYASFILVSAF----FTAVIPPVFLSIVLRPLTAGLFNYMPAGPTPIIFAILAQYHAVIPHIYRYRVAASAAPPTNDQFVGLTFSDKSYRYALACQLALFQWPGSMLGAAVGWIIGYSWRNDLLPGAVTKWRLP 212
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BLAST of mRNA_P-littoralis_Contig183.76.1 vs. uniprot
Match: A0A1Q8RY46_9PEZI (DSC E3 ubiquitin ligase complex subunit 2 n=1 Tax=Colletotrichum chlorophyti TaxID=708187 RepID=A0A1Q8RY46_9PEZI)

HSP 1 Score: 84.7 bits (208), Expect = 2.480e-15
Identity = 67/228 (29.39%), Postives = 113/228 (49.56%), Query Frame = 1 
Query:  100 FGSSPVTRGILVSTLAASAVLHIRDPDGILNVTLDVWRVLTEGELWRLLTCHTVCTSMGPLLACSLSMYRLRVLEPLLGSRKFSALVAVASALALPFEATAGVYFGTVRLTP-----------GPIPVVFALLVVYYAIVP----------PSKPRYFGALGLDFSDKSFTFCVAGMLAFCDGWDSIVPAVCGALVGGLYMMDTL--SIQALRLPSLVYRCFSRFCRS 714
            F ++PVTR +++  ++ S    + D      + +D   +L   + WRLLT    CT+   +L  S+++Y LRV+E + GSRK+++ + V++     F +     F ++ L P           GP P++FA+L  Y+A+VP           + P     +GL FSDKS+ + +A  LA      S++ A+ G +VG  +  D L  S+   RLP  +    S+  RS
Sbjct:    3 FTNAPVTRTLVLGLVSGSIAASLFDVKHYFYIIIDS-HLLRYHQFWRLLTYQLCCTNSSEVLFASMTLYHLRVIEQIWGSRKYASFILVSTL----FTSVIPPVFLSIVLRPLSASLFNYMPAGPTPIIFAILAQYHAVVPHIYRYRVAASAAPPTNDQFIGLTFSDKSYRYALALQLALFQWPGSLLGALIGWVVGHSWRNDVLPGSMTKWRLPGWMVGARSQSRRS 225
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BLAST of mRNA_P-littoralis_Contig183.76.1 vs. uniprot
Match: L2GHJ2_COLFN (DSC E3 ubiquitin ligase complex subunit 2 n=6 Tax=Colletotrichum gloeosporioides species complex TaxID=2707338 RepID=L2GHJ2_COLFN)

HSP 1 Score: 84.0 bits (206), Expect = 4.620e-15
Identity = 66/217 (30.41%), Postives = 110/217 (50.69%), Query Frame = 1 
Query:  100 FGSSPVTRGILVSTLAASAVLHIRDPDGILNVTLD--VWRVLTEGELWRLLTCHTVCTSMGPLLACSLSMYRLRVLEPLLGSRKFSALVAVASALALPFEATAGVYFGTVRLTP-----------GPIPVVFALLVVYYAIVP----------PSKPRYFGALGLDFSDKSFTFCVAGMLAFCDGWDSIVPAVCGALVGGLYMMDTL--SIQALRLP 675
            F ++PVTR +++  ++ S    + D      + +D  +WR     +LWRLLT    CT+   +L  S+++Y LRV+E + GSRK+++ + V+S     F A     F ++ L P           GP P++FA+L  Y+A++P           + P     +GL FSDKS+ + +A  LA      S++ A+ G +VG  +  D L  ++   RLP
Sbjct:    3 FTNAPVTRTLVLGLVSGSIAASLFDVKHYFYIIVDTHLWRY---HQLWRLLTYQLCCTNSSEVLFASMTLYHLRVIEQMWGSRKYASFILVSSL----FTAVIPPVFLSLVLRPLTAGLFNYMPAGPTPIIFAILAQYHAVIPHIYRYRVAASAAPPTNDQFVGLTFSDKSYRYALAIQLALFQWPGSLLGALIGWVVGYSWRNDFLPGAMTKWRLP 212
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BLAST of mRNA_P-littoralis_Contig183.76.1 vs. uniprot
Match: N4VKI7_COLOR (DSC E3 ubiquitin ligase complex subunit 2 n=4 Tax=Colletotrichum orbiculare species complex TaxID=2707354 RepID=N4VKI7_COLOR)

HSP 1 Score: 83.2 bits (204), Expect = 8.980e-15
Identity = 65/207 (31.40%), Postives = 107/207 (51.69%), Query Frame = 1 
Query:  100 FGSSPVTRGILVSTLAASAVLHIRDPDGILNVTLD--VWRVLTEGELWRLLTCHTVCTSMGPLLACSLSMYRLRVLEPLLGSRKFSALVAVASALALPFEATAGVYFGTVRLTP-----------GPIPVVFALLVVYYAIVP----------PSKPRYFGALGLDFSDKSFTFCVAGMLAFCDGWDSIVPAVCGALVGGLYMMDTL 651
            F ++PVTR +++  +++S    + D      + +D  +WR     +LWRLL+    CT+   +L  ++S+Y LRV+E + GSRK+++ V V SAL   F A     F ++ L P           GP P++FA+L  Y+A++P           + P     +GL FSDKS+ + +A  LA      S++ A+ G +VG  +  D L
Sbjct:    3 FTNAPVTRTLVLGLVSSSIAASLFDVKHYFYIVVDTHLWRY---HQLWRLLSYQLCCTNSSEMLFAAMSLYHLRVIEQIWGSRKYASFVLV-SAL---FTAVIPPVFLSIVLRPLTAGLFNYMPAGPTPIIFAILAQYHAVIPHMYRYRVAASSAPPTNDEFVGLTFSDKSYRYALALQLALFQWPGSLLGALVGWVVGYSWRNDFL 202
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BLAST of mRNA_P-littoralis_Contig183.76.1 vs. uniprot
Match: UPI0019008ED2 (involucrin repeat protein n=1 Tax=Colletotrichum karsti TaxID=1095194 RepID=UPI0019008ED2)

HSP 1 Score: 85.5 bits (210), Expect = 1.220e-14
Identity = 67/207 (32.37%), Postives = 107/207 (51.69%), Query Frame = 1 
Query:  100 FGSSPVTRGILVSTLAASAVLHIRDPDGILNVTLD--VWRVLTEGELWRLLTCHTVCTSMGPLLACSLSMYRLRVLEPLLGSRKFSALVAVASALALPFEATAGVYFGTVRLTP-----------GPIPVVFALLVVYYAIVP----------PSKPRYFGALGLDFSDKSFTFCVAGMLAFCDGWDSIVPAVCGALVGGLYMMDTL 651
            F ++PVTR I++  +++S    + D      + +D  +WR     +LWRLLT    CT+   +L  S+++Y LRV+E + GSRK+++ + V SAL   F A     F ++ L P           GP P++FA+L  Y+A++P           + P     +GL FSDKS+ + +A  LA      S++ AV G +VG  +  D L
Sbjct:    3 FTNAPVTRTIVLGLVSSSIAASLFDIKHYFYIIVDTHLWRY---HQLWRLLTYQLCCTNSSEVLFASMTLYHLRVIEQMWGSRKYASFILV-SAL---FTAVIPPVFLSIVLRPLTAGLFNYMPAGPTPIIFAILAQYHAVIPHIYRYRVAASAAPPTNDEFVGLTFSDKSYRYALAIQLALFQWPGSLLGAVVGWVVGYSWRNDLL 202
[Close]
BLAST of mRNA_P-littoralis_Contig183.76.1 vs. uniprot
Match: A0A4U6X2W3_9PEZI (DSC E3 ubiquitin ligase complex subunit 2 n=11 Tax=Colletotrichum TaxID=5455 RepID=A0A4U6X2W3_9PEZI)

HSP 1 Score: 82.4 bits (202), Expect = 1.670e-14
Identity = 65/216 (30.09%), Postives = 111/216 (51.39%), Query Frame = 1 
Query:  100 FGSSPVTRGILVSTLAASAVLHIRDPDGILNVTLD--VWRVLTEGELWRLLTCHTVCTSMGPLLACSLSMYRLRVLEPLLGSRKFSALVAVAS---ALALPF-------EATAGVYFGTVRLTPGPIPVVFALLVVYYAIVP----------PSKPRYFGALGLDFSDKSFTFCVAGMLAFCDGWDSIVPAVCGALVGGLYMMDTL--SIQALRLP 675
            F ++PVTR +++  + +S    + D      + +D  +WR     ++WRLL     CT+   +L  S+++Y LRV+E + GSRK+++ VAV++   A+  P          TAG++     +  GP P++FA+L  Y+A++P           + P     +GL FSDKS+ + +A  LA      S++ A  G +VG  +  D L  ++   RLP
Sbjct:    3 FTNAPVTRTLVLGLVTSSIAASLLDVKHYFYIVVDTHLWRY---HQIWRLLAYQLCCTNSSEVLFASMTLYHLRVIEQIWGSRKYASFVAVSALFTAVVPPVLLSLVLRPLTAGLFN---YMPAGPTPIIFAVLAQYHAVIPHIYRYRVAASSAPPTTDQFVGLTFSDKSYRYALALQLALFQWPGSLLGAAIGWVVGYSWRNDLLPGAVTKWRLP 212
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig183.76.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KY80_9PHAE1.140e-11875.00UBA domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S2UTJ4_9STRA4.390e-1832.47Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A8H7VUF7_9FUNG1.940e-1731.25Uncharacterized protein n=1 Tax=Thamnidium elegans... [more]
A0A068S933_9FUNG1.790e-1630.48CUE domain-containing protein n=2 Tax=Lichtheimia ... [more]
A0A8H6U3Y6_9PEZI2.480e-1529.49Uba domain-containing protein ucp14 n=4 Tax=Collet... [more]
A0A1Q8RY46_9PEZI2.480e-1529.39DSC E3 ubiquitin ligase complex subunit 2 n=1 Tax=... [more]
L2GHJ2_COLFN4.620e-1530.41DSC E3 ubiquitin ligase complex subunit 2 n=6 Tax=... [more]
N4VKI7_COLOR8.980e-1531.40DSC E3 ubiquitin ligase complex subunit 2 n=4 Tax=... [more]
UPI0019008ED21.220e-1432.37involucrin repeat protein n=1 Tax=Colletotrichum k... [more]
A0A4U6X2W3_9PEZI1.670e-1430.09DSC E3 ubiquitin ligase complex subunit 2 n=11 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig183contigP-littoralis_Contig183:364425..371903 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FMP5
Preferred nameUBAC2
PFAMsDUF1751,Rhomboid,UBA
Model size970
Max annot lvl2759|Eukaryota
KEGG koko:K01365
KEGG Pathwayko04140,ko04142,ko04145,ko04210,ko04612,ko05205,ko05323,ko05418,map04140,map04142,map04145,map04210,map04612,map05205,map05323,map05418
Hectar predicted targeting categoryother localisation
GOsGO:0000139,GO:0000151,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005794,GO:0006355,GO:0006357,GO:0006508,GO:0006807,GO:0006950,GO:0006984,GO:0006991,GO:0007154,GO:0007165,GO:0008104,GO:0008150,GO:0008152,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010559,GO:0010604,GO:0010605,GO:0010628,GO:0012505,GO:0016020,GO:0016021,GO:0016485,GO:0019219,GO:0019222,GO:0019538,GO:0019899,GO:0023052,GO:0030162,GO:0031090,GO:0031224,GO:0031228,GO:0031300,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031330,GO:0031399,GO:0031625,GO:0031984,GO:0032182,GO:0032268,GO:0032269,GO:0032386,GO:0032387,GO:0032879,GO:0032880,GO:0032933,GO:0032991,GO:0033036,GO:0033157,GO:0033365,GO:0033554,GO:0034613,GO:0035103,GO:0042176,GO:0042177,GO:0043130,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044389,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0044695,GO:0045861,GO:0045893,GO:0045935,GO:0045944,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0050789,GO:0050794,GO:0050896,GO:0051049,GO:0051051,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051223,GO:0051224,GO:0051246,GO:0051248,GO:0051252,GO:0051254,GO:0051604,GO:0051641,GO:0051716,GO:0060049,GO:0060255,GO:0060341,GO:0061136,GO:0065007,GO:0070201,GO:0070727,GO:0070861,GO:0070862,GO:0070972,GO:0071501,GO:0071704,GO:0080090,GO:0080134,GO:0080135,GO:0090087,GO:0090317,GO:0098588,GO:0098791,GO:0098796,GO:1900037,GO:1900039,GO:1901564,GO:1901799,GO:1902494,GO:1902680,GO:1903018,GO:1903050,GO:1903051,GO:1903362,GO:1903363,GO:1903506,GO:1903508,GO:1903573,GO:1903827,GO:1903828,GO:1904152,GO:1904153,GO:1904292,GO:1904293,GO:1904950,GO:1905897,GO:1990234,GO:2000112,GO:2001141
Exons8
Evalue3.99e-137
EggNOG OGsKOG4463@1|root,KOG4463@2759|Eukaryota
Ec32 ortholog descriptionUbiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote
Ec32 orthologEc-23_001100.1
EC3.4.22.15
DescriptionUbiquitin-associated domain-containing protein
Cds size969
COG categoryS
BRITEko00000,ko00001,ko00537,ko01000,ko01002,ko03110
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig183.76.1prot_P-littoralis_Contig183.76.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig183 364426..371903 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789882.7938662-CDS-P-littoralis_Contig183:364425..3645061680789882.7938662-CDS-P-littoralis_Contig183:364425..364506Pylaiella littoralis U1_48CDSP-littoralis_Contig183 364426..364506 -
1680789882.8062449-CDS-P-littoralis_Contig183:365025..3652141680789882.8062449-CDS-P-littoralis_Contig183:365025..365214Pylaiella littoralis U1_48CDSP-littoralis_Contig183 365026..365214 -
1680789882.816317-CDS-P-littoralis_Contig183:365643..3657751680789882.816317-CDS-P-littoralis_Contig183:365643..365775Pylaiella littoralis U1_48CDSP-littoralis_Contig183 365644..365775 -
1680789882.8254285-CDS-P-littoralis_Contig183:366405..3665471680789882.8254285-CDS-P-littoralis_Contig183:366405..366547Pylaiella littoralis U1_48CDSP-littoralis_Contig183 366406..366547 -
1680789882.8374178-CDS-P-littoralis_Contig183:366910..3670661680789882.8374178-CDS-P-littoralis_Contig183:366910..367066Pylaiella littoralis U1_48CDSP-littoralis_Contig183 366911..367066 -
1680789882.8460119-CDS-P-littoralis_Contig183:367188..3672551680789882.8460119-CDS-P-littoralis_Contig183:367188..367255Pylaiella littoralis U1_48CDSP-littoralis_Contig183 367189..367255 -
1680789882.856708-CDS-P-littoralis_Contig183:367789..3678881680789882.856708-CDS-P-littoralis_Contig183:367789..367888Pylaiella littoralis U1_48CDSP-littoralis_Contig183 367790..367888 -
1680789882.8682961-CDS-P-littoralis_Contig183:371800..3719031680789882.8682961-CDS-P-littoralis_Contig183:371800..371903Pylaiella littoralis U1_48CDSP-littoralis_Contig183 371801..371903 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig183.76.1

>prot_P-littoralis_Contig183.76.1 ID=prot_P-littoralis_Contig183.76.1|Name=mRNA_P-littoralis_Contig183.76.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=323bp
SVLLLNSRQCNDGVVVRRFIYGEEHTCGEMFAGFGSSPVTRGILVSTLAA
SAVLHIRDPDGILNVTLDVWRVLTEGELWRLLTCHTVCTSMGPLLACSLS
MYRLRVLEPLLGSRKFSALVAVASALALPFEATAGVYFGTVRLTPGPIPV
VFALLVVYYAIVPPSKPRYFGALGLDFSDKSFTFCVAGMLAFCDGWDSIV
PAVCGALVGGLYMMDTLSIQALRLPSLVYRCFSRFCRSFTSSPSRRGGPF
SGGSSPSPAPRAVRRPPRLGQALLGPSRGLAGGGGLFSYFASGQQQGSAR
LRNSTSSSPPLPPPSDETVTSLM
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mRNA from alignment at P-littoralis_Contig183:364425..371903-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig183.76.1 ID=mRNA_P-littoralis_Contig183.76.1|Name=mRNA_P-littoralis_Contig183.76.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=7479bp|location=Sequence derived from alignment at P-littoralis_Contig183:364425..371903- (Pylaiella littoralis U1_48)
TCTGTGTTGCTGCTGAACTCACGGCAGTGCAACGATGGCGTGGTGGTGAG
ACGGTTCATCTACGGGGAGGAACATACTTGTGGCGAGATGTTTGCAGGAT
TCGGTGAGTACAGGTGGAGTGTTGTATTCTTGACGATGTTAACACAGAAT
AAAAGCATATGATGCCGCAGTACAACAACAATAACCCTCCGCATCCCGCT
CCGAAACATACGGCACCAACACAAGATTTACTGCAGTTCTACAGCGCGTG
TCGGAGAGCATACGGCAGTTGGCAGGGACTTCTCCTCACTAGCACAATCG
GCGGCAGCCAAGGCTTGATCGCAGGCAGCCGCTCTGCTTCGTACGCATCT
GCTTCTTGTTAACTGATGTTTGCTATGTATCTTGTTTCTCACATGCAGAG
GGCAGAACGAATGTTTTCTTCGTCAGGAGAGGTTGCCGGTTTGCCGATTT
TGCAACAGCAGCGGTACCACCCCCGTACAGCACATGAATTTAGGCAGCAG
TCAGACGACGATCATGCGTTGGCTCTACTTACAAATAACCTGGAGTCTTG
ATATAAATATGACGCCCCATTGCACCAAGCATTCAGGTTTTCCGTTTGAC
GCAAACTCATCTCTGTCGCTATTGCTGCTGCACTTCTGCAACACACATCA
TGTGTACGATACTCGTAAAGCACAGGTCCTTCCCGCTGCTGCTGTACACT
TCAGCATCTCGACTTGTTCATTTCTCATCAACAACAGCAGCTTCAATACT
TGAACAACAGCAACACGGGATTGCTTGTGCTCCCACTCTCTTGCGAGATT
CAACTGGCGCTTGCTGTGCCTTGCTGCCGCCCTTGTACGCGTTGATGTTT
CTTATCGATGCCCTCCAAGCCAAGCCCGAAACGAGGAATCGATCGAATTT
TCCGTGATTTTTTCTTTTCCCGTCCGGACGAAATTCACGTCAACCGTTTC
TTACATCTTCCCTCTACTTCTGTATTACGAAGTTGAAGTACTTTGCTCAG
AGGGGGGTTTTTTCGCTTGGTGTGTGTGTTGTCATCCCATTTAATCTGGG
CACCAGTCTCCACCGTTCGGTATGAAGTGGGTGCATCAGCCGTGGGTCAC
ACAGGAGGAAGGTCACACACGAGCTTTTTTGTTTTTTATTTTGTTTTATT
GCCCAAACCTTCCTCCTGCGGTACGTGCCTTGGTTTTTAATGCGAGTCGG
GTACAGCTATCCCTTCCCTCTGTTTACTCACGAGTAATTCGCTTTCCACT
GTAAGAAAAAATGAAGGCAAGTACCGAAGAGGGAAGTGGAGAAGGAAGAA
AATAATTAAAAGAAAAACTCCTGTGTTGACTTCCTACTGTGTGACCCCGG
TTGGAGCGTCTACCCACCCGAAAGGTGTAGAGTGGCGTCCAATTAGTGGG
ATGACAACACACACACTGTAAAGTCGCAAGAAACGCTCTTGGTATGATCA
TGATATCGTACTACTATATAAAGCTTGTGTGTGACCTTCCCCCTGTGTGA
CTCCGGCTAAACGTCAAGGTACCCACCGAAAGGTGTATATACAGGCGCCA
GAATGAATAAATGGGACGAACTCACACACACACACACACACACACCCTCC
GAAATCCGGAGAGCCCAAACGGCTTAAAATGGTATTTTCTGAGCACCACA
GGGGACAGCACCAACCAGAACTCGGCCCCTCGGACACCAATCGCGATCAA
ACCTGCGGGAGTGTGCACTCCAATGCTGTGAGATCGTCCACAGCAAGTTT
GATGGGTGTGGATGTCTGTTGGCTGTTGCGAGAATGTTGGCCGTTGCGAG
ATTCTGGCGGCGATTTGGGTCAGGGTAGAAAAATTCGGTGAAAAAAGAAA
ACCAGGCTCGGACGACCTACCGCAGTACTGCTCTATTATTTCTGTTTCAT
CGGATATTTCCACCTCAACAAACACCGCCGGCAACATCTCGGCACACCCT
CAGAACACCGAATGCTGTTGGTGGACCAGGGGCCGAGTACTGGTTGGTGC
TGTCTCCCGTTGTGGTTGACAGGATGTTTAGACGGGGAGGGGAGGGGCTC
TCTGGTTTAATTCGGGCAAAAGGGGTATGAAATCAAAACCAAAAATTCGT
GAACCATAAGAAACAGCCTCAGGCTACTCACACTATATTTTGAAGACCCT
CTGCCGGGAAAAAATCGGTAGGCCCAAGTGGCCAGCCTCTCTTATGAGAT
ACACAGAGAATCCTTGTGTGGATCTATGGCCCGGTTTCGCGGTGTCCTCC
AGAAGCGTGTTGCAACAGGAACATGGGCTGCATACGTGGAGGGGACAAGG
CGCACGCACCACGCACGTACGTGCCACCATCTGACAGCACAACAAACAAT
AATCAACAACAACAGATCGAACGCCCAAAAATGTGTTCCACACAGAGTGC
GGTGCTCTCCACCGCAGACATCATCGGACAGAACACCGAACATGTGCTCA
GCAGTAGTAAGTAGTAGAACAGAGGGCTATCATGCCGGGGGAGTCGTTGA
ATCTAGATGCTGTGAACCCGGCCCAGCCCGGCCAGTACACGCGAGTCATC
TTTGGCGACGTCTCCGCGCTGAAGTTGCCAAAAGAGCGATGAGCTGCGCA
TCATGTCTTTCGCTGCTTAGTCATGCTCGAGCCAGGCTCCATCGCGGGTT
GGTTGTGGGGTGTGGTTGCGGTCGCGGTTGGTTGTGGTTCTGAGTGTGCG
CTCGACACGATCGCAGAGAACAACAACAACAACAACAACAACAACATTTC
CACCAAAACATATGGCAACCGCGAGGAGGTAATGTGCGTCGAGGGCCAGC
CAGCGAATGTCGTGAAGGCCACCATTCCGTAAGAATCAGGACGTGGGAGG
CCTTCGAGCTCCTCTCTTAACGCCGTTAAGTGAAGGTTGGGATTCCGACG
GAAAAAACACCATCATGTCCGGGATTTTGAACCACTTTGACCAACGCACT
TCCTTGTCGCGACCGTTGCCTAACCAGCACGCGAGATGTGACAACCGCGT
TGAGGTCGAGGGCCAGCACCACACAGACCTCCGTTTCGAAAGAATCGAAA
GAACCAGGACTCTGGAAGCAAGCCTTCAAGCTCTGGTTCTGCCTGGTGGC
GTAAAGTGTAATTTGTTCGCTTTGCCCACGTTTGAGCACCAGCTAGCTCC
TATTCGATAAGAAAATTCGCGAGCTCAGGCTATTGGAGGTTGTCGATTTC
GAACCTTCTTTACTGGATGTACCGGTAAGCACACGGGCGCAGAGCGAAGT
GCACACTAGAACGTAGATTCTCACTTTGCTGAACGTCGTGGCTCAGATGG
TGCAAGAGCTTTCATTTCAAACCTCTGCTCAACAGCAATGGACGTGTTTT
CTGAATTTCTTCACAGTAGAGGGTCGAGTTTTCCACGAGTGCACAAAATT
CGACTCTACGTACACCAGTGTACAGAAATAACCCTATCCCCCCACCCCAA
ATATTGCAAACTTTCTGCACCACCAGCAGCCGGTCAGAACGCTCTTACGA
AAGGTGATGCAAGACATCATCCCCCAAAAATTAAAAAAATCTCGCGCGGT
GGCATACTTTTCCAGACTCTCAAAGGCTGTCGCACGTGGGTGTGCTATCA
AACGTATGTTGAGCAATTCACGTTAGTCGACGGCTCTCAGTACAGCAACG
ACAGAACCACCGGCATTGTCACGAACAGTGCCGCAACCGGCCCGCACTAT
CGAGATTCTTGAGATGTCCTACTACCGCTGTACTTGTAGGAGTGCCGGAA
TCGTTAGCAGCCCGGAGAAAATTGCCGTGGGTAGCAGCAGCACTTTCGAG
CCAGTCGATCGGAGCGCCAAGGGCCGGCCGGGTTGTACGGAACCCCCTTT
GCGAATAATTAATACGTTTATTCCTCCCCGAGTCCGTCTCATGTGGGCGT
ACCTTCTACAATGTCCGCAAAATAAAACGCGACCCCCCCCCAACCACCGT
CCACCCCCGTCCCGTCTTTTCGTGTTTGTGCATGTGTATGCGTGGGACTG
CCCACGGCAACGCAGGCAGCTCGCCAGTGACAAGGGGGATCTTGGTGTCT
ACCCTCGCGGCATCCGCCGTTCTTCACATCAGAGACCCTGATGGGATCCT
CAACGTAACGCTCGGTGAGATAAGGTGGAAAACCCTTCATCCAGTGTTTA
CACATATCATGTTTAATATATTATGTTGCTTGGTTCCCTTAACGGCGTGT
TCGGCCAAGTAGGTTTTCCAAACCTCTCATGATTCGAAGGGAGTCGAACA
CGTCAAATGTATAACGTAGCCACGGCGACGGTAAAAACCCACCCGTTCGA
AAACCGCACCACGCGAAGTATTTAGTGTGGGGGACATGGCGAAGCAAGGA
ACAGTCAGTAGTACTAGGCTTAAAACACTCAGTACATGCAATGCCATCAT
CAAATCAAAAAGGGGTGGAAATAGGACATCAGTCTTGTGAAGATATGTAA
GAGTGGCTGATGTCCCAGAAATAGCTGGGTCCACTTACGGTACAAATACT
GTCTGTATAAGAAACTAGCATGATACACCACACAACCGTAACGTTCGGGG
AGATATAAAAACGCCAACATGCTGAACCGACACTTGACTTTTTTTTTGGC
CCGCTGGTTTGAATTTCGTCGTCGTTGTGTTTGTTTCGCTACAAACAGAT
GTTTGGCGGGTGCTCACAGAGGGGGAGCTCTGGCGGCTTCTAACTTGTCA
CACCGTGTGCACTAGGTGAGACTTGCGTCCTTGTTGTTGTTGTTGTTGTT
GCTGTTGCTGTTGCTGTCTCGACATTTTTGACGCTCTTCCTTCATGTTTC
ATTTGTTCCTTTCCCCCCCTTTTTTTACATCAAACAGCATGGGGCCGTTA
CTAGCGTGTTCCCTCTCTATGTACCGCCTCCGTGTGCTGGAACCCCTGCT
CGGTTCGAGGAAGTTCTCAGCGTTGGTGGCGGTAGCTTCAGCTCTGGCAC
TTCCTTTCGAGGCCACGGCGGGAGTGTACTTCGGGACTGTCAGGTGTGGT
TGTGAGATTGTTAGGTGTGACTGGTGATACTGGATACTGGGGGCGGTCAT
GTATGATTCGGATCCTGTCCGAGACTGTCATCAAGTGTGACTCGGGACTG
TCGTTTGAGATATGAGTACTTGTAGAGACTCGGGACTGTTCAAGTTTTGA
GTCGAGACTGTCAGGTGATGGGGATGGTCCGGCGTTCGGCGAAAGGAAAC
GACATACTGATAAAGATACCCTCAAGTACACGTTATTAAGTGGTGCAATC
CCCCCGCCACCACCTCAACGGTCGCCACCGCCCCTCCGGCACCACAGTGC
TCTCCTATTTTCATACAACACTCGCCAACAAAATCAACACAAATAAACCG
TGGCAGGCTTACACCCGGGCCCATTCCCGTCGTCTTCGCCCTGCTGGTGG
TGTACTACGCCATCGTGCCTCCATCCAAGCCGCGGTACTTCGGCGCCCTG
GGTTTGGATTTCTCGGACAAGTCGTTCACGTTTTGCGTGGCGGGAATGGT
GAGAGGGAATCACTTAATGTGTATATATGTGTTACCCCGACATCAAAATT
AAAAACTGCTCCCATATCTGCTCAACACCCTCTGAAGCCCGTGCTCCTAA
TCAAGCTACTCTACCGGTAATTCGGGAATGCCCATGGTCCCACGCTATAT
TCTGCCTAACAGGGTGTGAGGGAAAAATTGACCGAAGTTGAAAGGGACCC
GAAGACCGAAGATATCTCTTGAAACCGAACAAGAAAATTAATTAATAGTA
CGGAAATAGCCCCAGCCAATGGACCACGTCGTATGGTCTTCCAGGTTTTG
TGAGGTTTGTCAAAAGCTCCACCAAAGTCATGTAAATTGTTGCTGTTTCC
ATTGTAGTCAAGGGTGGTGACTCGTAGTACACGCCGGAGTATTACTTTTT
TTTTTTGTCCTCGGCAAAGGCGATCGATAGTTCTTTCGCGTCGGCGGGGA
TGACGAGAGAGGACGAGATGGACCTCTTGGAATACTTTCAGGTTTACGTA
CAAAACACTGGTCGTGCCTTCCCGTGAAATATATCACGGAACCCCTCAAC
CATCCACTCCTCACAATTATTCCTTCGTTCACGCGATGGATGCCACGTTT
GCTTGGTTTTGACACCGAAAAATGAAAGTTGGCGTTTTGCGACGGGTGGG
ATTCCATCGTCCCCGCCGTGTGCGGCGCGCTGGTGGGTGGGCTTTACATG
ATGGATACCTTATCCATCCAGGCGCTGCGGCTGCCCAGCCTGGTTTACCG
GTGTTTTTCGGTGAGTTGAACCGCCGTTGCGTCACTTGAGAAATCGCATC
ACCGTCCGGGCCACGAGATCGTTGGCTTAAAAACCGTTGTGTGCCATGGT
ATTGTTTTGACAGAAGAGTCAGGGGGTATCATCATCTCGTGGACTGGGAT
TTGGTTTCACCGAAAACAATGTTAAGTTCAAGAGGGCGTATGCACCTGTT
GTTGTTGTCGTCGTCACACGACTAGCCCGGTGTATCGGACCTGTGTACCT
GATAATCACGAAGGTGTGGCCGCCAGCTTCCCTGGACAATCCTATCGCTT
TCATTCATACGTGAAACATATCACAAACACAGCAAATTTACACATTTACA
CACGCGGTTGTGGGATTTCGGAATACTCTGACGTTTTTCCTACATCCTTC
CCCATTAGTAACCCTCGTTCCTTTTCTCGCCGAGCGAAGAGGTTTTGCCG
GTCATTTACGTCGTCGCCCTCTCGAAGAGGAGGGCCGTTCTCCGGCGGCA
GCTCCCCTTCTCCAGCCCCTCGCGCCGTACGCAGGCCCCCCCGCCTTGGG
CAAGCCCTCCTGGGTCCTTCGAGAGGGCTCGCTGGCGGTGGCGGTCTCTT
CTCTTACTTTGCGTCGGGTCAACAGCAGGTGCGAAAAATAATACGAAGTA
CTCCGGAGTACAACACTGTACGAAAATAAAGTGGGTTTTGTTTTTTGTTG
TTGTTGTATTTATTGCTCCGGGTGTTTTTTTTGTCGTCTACTGCCAAAAC
ACAACACAACACAAGACAAAACAACACAACACAACTTAGAAGAAAAGTGC
ATGTAATCTTGCACAACGCAAAGATACAGTTAGTTTGCCGGGGGGTGTCT
TCGTATGAATCGTTTTTTCATCTCCTCGGCATCAGCGACCCACCCCAGGT
TTTACGGAATGTAGCATTGCGTGTGCGGCGACGCTAACACGACTCTTTTT
TAATTTTTCAACAATTTGTTTACAAACCATGACGGTGGGTGCATGCAATG
CTACCTGGCACACACGAAGCTCTTGTACAAAATTTATTGCAACAGGTGCA
TATTTCATTTGATTTAATAACACGAAACTGTTTTTTTTGCGTTCCCCGGT
CTGTGATATTTGTTTTTGTCGTTTTCTTTTTCGTTGGCGTTTTGCAGGGG
TCCGCACGATTGAGAAATAGCACTTCTTCATCCCCTCCTCTGCCACCACC
GTCGGACGAAACCGTGACATCGCTCATGG
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Coding sequence (CDS) from alignment at P-littoralis_Contig183:364425..371903-

>mRNA_P-littoralis_Contig183.76.1 ID=mRNA_P-littoralis_Contig183.76.1|Name=mRNA_P-littoralis_Contig183.76.1|organism=Pylaiella littoralis U1_48|type=CDS|length=969bp|location=Sequence derived from alignment at P-littoralis_Contig183:364425..371903- (Pylaiella littoralis U1_48)
TCTGTGTTGCTGCTGAACTCACGGCAGTGCAACGATGGCGTGGTGGTGAG
ACGGTTCATCTACGGGGAGGAACATACTTGTGGCGAGATGTTTGCAGGAT
TCGGCAGCTCGCCAGTGACAAGGGGGATCTTGGTGTCTACCCTCGCGGCA
TCCGCCGTTCTTCACATCAGAGACCCTGATGGGATCCTCAACGTAACGCT
CGATGTTTGGCGGGTGCTCACAGAGGGGGAGCTCTGGCGGCTTCTAACTT
GTCACACCGTGTGCACTAGCATGGGGCCGTTACTAGCGTGTTCCCTCTCT
ATGTACCGCCTCCGTGTGCTGGAACCCCTGCTCGGTTCGAGGAAGTTCTC
AGCGTTGGTGGCGGTAGCTTCAGCTCTGGCACTTCCTTTCGAGGCCACGG
CGGGAGTGTACTTCGGGACTGTCAGGCTTACACCCGGGCCCATTCCCGTC
GTCTTCGCCCTGCTGGTGGTGTACTACGCCATCGTGCCTCCATCCAAGCC
GCGGTACTTCGGCGCCCTGGGTTTGGATTTCTCGGACAAGTCGTTCACGT
TTTGCGTGGCGGGAATGTTGGCGTTTTGCGACGGGTGGGATTCCATCGTC
CCCGCCGTGTGCGGCGCGCTGGTGGGTGGGCTTTACATGATGGATACCTT
ATCCATCCAGGCGCTGCGGCTGCCCAGCCTGGTTTACCGGTGTTTTTCGA
GGTTTTGCCGGTCATTTACGTCGTCGCCCTCTCGAAGAGGAGGGCCGTTC
TCCGGCGGCAGCTCCCCTTCTCCAGCCCCTCGCGCCGTACGCAGGCCCCC
CCGCCTTGGGCAAGCCCTCCTGGGTCCTTCGAGAGGGCTCGCTGGCGGTG
GCGGTCTCTTCTCTTACTTTGCGTCGGGTCAACAGCAGGGGTCCGCACGA
TTGAGAAATAGCACTTCTTCATCCCCTCCTCTGCCACCACCGTCGGACGA
AACCGTGACATCGCTCATG
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