mRNA_P-littoralis_Contig183.49.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig183.49.2 vs. uniprot
Match: D7FXK3_ECTSI (ATP-dependent DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXK3_ECTSI) HSP 1 Score: 750 bits (1937), Expect = 1.370e-263 Identity = 394/539 (73.10%), Postives = 444/539 (82.37%), Query Frame = 1
Query: 145 MAHRGGVADVLWRARREKLLRVLREVFGYENFRGKQEEAMREVASGCDSLVVMPTGGGKSLCYQLPALVADGICIVVSPLIALTEDQLRGLHEKGIEAASLTSSSASQARAGAVMSDILGCTSGGGRRRHRME---SPQASPEE-ADEEGGAPKTKLLYVTPEKLAKSSKLTAALGELASRGLVSLLAVDEAHCISSWGHDFRPAYLKLAGFRKKHLKGVPCIALTATATSEVCADIMKQLGFPKGSRILKTSFNRPEIHLSVRYKDAMDGGALQNLVGFLRKRRGQSGIVYCHKRATAEELAKALNRALNREDVLLEDQKAFIAMPYHGKMTDADRSEAQEKFMSGDVDVITGSVAFGMGIDKANVRFVAHWDLPKSMEGLYQELGRAGRDGAPAVSVVYHSHESVSLLAFLARKPRPLTDAEKGTDAGRRKQEQAALKAVKSVEAVVAYCETQGCRRKTLLAHFGE---RAEGAAARGDGKRN----------------DVCRGTCDWCGGDRDREKIAKDLLKLSAAKAGSGWMGV 1692
MAHRGGVADVLW ARREKLLR LR+VFG++ FRGKQEEAMREV+SG D+LVVMPTGGGKSLCYQLPA+VADG+C+V+SPLIALTEDQLRGL+EKG+EAASLTSSSAS++RA AVM DIL G G E S + P AD APK KLLYVTPEKLAK +LT AL LA RGL+SLLAVDEAHC+S+WGHDFRPAYL+L FRKKHLKGVPC+ALTATAT EVCADI KQLGF +GSR+LKTSFNR EIHLSV YKDAMDGGAL++LVGFLR+RRGQSGIVYCHKR TAEELAKALNRAL RE+ LL+ KAF+AMPYHGKM+D DR+EAQ KFMSG+VDVI GSVAFGMG+DK++VRFV HWDLPKSMEGLYQELGRAGRDG+ AVSVVYHS E+V LLAFLARKPRPL EKGT+AGR+++ +A+LKAVK+V++VVAYCE QGCRRK LLAHFGE AAA G KR D+CRGTCDWCGG+R E+I DLLKL+ A+AG GWMGV
Sbjct: 1 MAHRGGVADVLWEARREKLLRALRDVFGHQGFRGKQEEAMREVSSGHDALVVMPTGGGKSLCYQLPAVVADGVCVVISPLIALTEDQLRGLYEKGVEAASLTSSSASRSRAAAVMDDILAYGGGSGSGHSTKEGVTSEKGGPNSRADGARAAPKIKLLYVTPEKLAKGGELTTALAGLAKRGLISLLAVDEAHCVSTWGHDFRPAYLELGAFRKKHLKGVPCLALTATATEEVCADIKKQLGFREGSRVLKTSFNRAEIHLSVHYKDAMDGGALEHLVGFLRERRGQSGIVYCHKRDTAEELAKALNRAL-REESLLDGGKAFLAMPYHGKMSDHDRTEAQAKFMSGEVDVIAGSVAFGMGVDKSDVRFVVHWDLPKSMEGLYQELGRAGRDGSKAVSVVYHSRETVGLLAFLARKPRPLAGKEKGTEAGRKRRRRASLKAVKAVDSVVAYCEKQGCRRKALLAHFGEVPGAPAAAAAAGQKKRGPATASAGSSKSSFVPTDICRGTCDWCGGER--ERIKTDLLKLAGARAGGGWMGV 536
BLAST of mRNA_P-littoralis_Contig183.49.2 vs. uniprot
Match: A0A6H5KCP0_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCP0_9PHAE) HSP 1 Score: 518 bits (1335), Expect = 1.120e-171 Identity = 268/376 (71.28%), Postives = 309/376 (82.18%), Query Frame = 1
Query: 670 SRGLVSLLAVDEAHCISSWGHDFRPAYLKLAGFRKKHLKGVPCIALTATATSEVCADIMKQLGFPKGSRILKTSFNRPEIHLSVRYKDAMDGGALQNLVGFLRKRRGQSGIVYCHKRATAEELAKALNRALNREDVLLEDQKAFIAMPYHGKMTDADRSEAQE--KFMSGDVDVITGSVAFGMGIDKANVRFVAHWDLPKSMEGLYQELGRAGRDGAPAVSVVYHSHESVSLLAFLARKPRPLTDAEKGTDAGRRKQEQAALKAVKSVEAVVAYCETQGCRRKTLLAHFGE---------------RAEGAAARGDGKRN----DVCRGTCDWCGGDRDREKIAKDLLKLSAAKAGSGWMGV--RNPGVGVGAGGR 1728
+RGL+SLLAVDEAHC+S+WGHDFRPAYL+L FRKKHLKGVPC+ALTATAT EVCADI KQLGF +GSR+LKTSFNR EIHLSV YKDAMDGGAL++LVGFLR+R GQSGIVYCHKR TAEELAKALNRAL +E LL+ +KAF+AMPYHGKM+D DR+EAQ KFMSG+VDVITGSVAFGMG+DK++VRFV HWDLPKSMEGLYQELGRAGRDG+ AVSVVYHS E+V LLAFLARKPRPL EKGT+ GR++Q +A+LKAVK+V++VVAYCE GCRRK LLAHFGE R ++ G G+ N D+CRGTCDWCGG+R E+I DLLKL+ A+AG GWMGV R+ G VGA G+
Sbjct: 18 TRGLISLLAVDEAHCVSTWGHDFRPAYLELGAFRKKHLKGVPCLALTATATEEVCADIKKQLGFREGSRVLKTSFNRAEIHLSVHYKDAMDGGALEHLVGFLRERSGQSGIVYCHKRDTAEELAKALNRALRKES-LLDGRKAFLAMPYHGKMSDHDRTEAQARAKFMSGEVDVITGSVAFGMGVDKSDVRFVVHWDLPKSMEGLYQELGRAGRDGSKAVSVVYHSRETVELLAFLARKPRPLAGEEKGTETGRKRQRRASLKAVKAVDSVVAYCEKLGCRRKALLAHFGEVTGAPAAAXXXXQKKRGLATSSAGSGRSNIVPTDICRGTCDWCGGER--ERIKTDLLKLAGARAGGGWMGVDVRDLGGSVGASGK 390
BLAST of mRNA_P-littoralis_Contig183.49.2 vs. uniprot
Match: A0A176VZW5_MARPO (ATP-dependent DNA helicase n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176VZW5_MARPO) HSP 1 Score: 326 bits (836), Expect = 9.220e-99 Identity = 205/494 (41.50%), Postives = 280/494 (56.68%), Query Frame = 1
Query: 190 REKLLRVLREVFGYENFRGKQEEAMREVASGCDSLVVMPTGGGKSLCYQLPALVADGICIVVSPLIALTEDQLRGLHEKGIEAASLTSSSASQARAGAVMSDILGCTSGGGRRRHRMESPQASPEEADEEGGAPKTKLLYVTPEKLAKSSKLTAALGELASRGLVSLLAVDEAHCISSWGHDFRPAYLKLAGFRKKHLKGVPCIALTATATSEVCADIMKQLGFPKGSRILKTSFNRPEIHLSVRYKDAMDGGALQNLVGFLRKRRGQSGIVYCHKRATAEELAKALNRALNREDVLLEDQKAFIAMPYHGKMTDADRSEAQEKFMSGDVDVITGSVAFGMGIDKANVRFVAHWDLPKSMEGLYQELGRAGRDGAPAVSVVYHSHESVSLLAFLARKPRPLTDAEKGTDAGRRKQEQAALKAVKSVEAVVAYCETQGCRRKTLLAHFGERAEGAAARGDGKRNDVCRGTCDWCGGDRDREKIAKDLLKLSAAKA 1671
+E+L +L+ FG+ +FRG+Q EA+ V SG D +MPTGGGKS+CY +PAL GI +VV PLIAL E+Q+ L + I A L+SS ++ +A + ++ES G P +LLYVTPE +A +T + +L RGL+SL+AVDEAHCISSWGHDFRP+Y KL+ R HL VP +ALTATA +V D++K L +I +SFNRP I+ VRYKD + A ++L ++ IVYCH RAT +++ L+ Q + YH + RSEA E++ SG V V+ +VAFGMGID+ +VR V H+++PKS+EG YQE GRAGRDG PA SV+Y+ E L+ FLARKP P A + DA E K V++ +V +CE CRR+ +LAHFGE A +C TCD C R + ++A L L+ A +
Sbjct: 62 KERLEGLLQRHFGHSSFRGRQLEAIEAVLSGQDCFCLMPTGGGKSMCYAIPALAKPGIVLVVCPLIALMENQVSALKAQKIAAEHLSSSQGAKVKA---------------KIYEQLES------------GRPSLRLLYVTPELIATPGFITR-IKKLHGRGLLSLIAVDEAHCISSWGHDFRPSYRKLSALRT-HLPDVPILALTATAAKKVQDDVVKSLAL-HNPQIFISSFNRPNIYYEVRYKDLLKN-AYEDLRNLIKSNPDDCCIVYCHSRATCDDVGLRLS------------QDKISSRVYHAGLAAKARSEALEEWTSGKVPVVIATVAFGMGIDRKDVRMVCHYNVPKSLEGFYQESGRAGRDGKPARSVIYYGLEDKGLMEFLARKPDPGQKAREKVDA-----ENQVKKNVEAFSQMVQFCEEARCRRQRVLAHFGEHVSTA----------LCAKTCDSC---RFQSRVAACLEDLALASS 494
BLAST of mRNA_P-littoralis_Contig183.49.2 vs. uniprot
Match: A0A1Y1I869_KLENI (ATP-dependent DNA helicase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I869_KLENI) HSP 1 Score: 323 bits (827), Expect = 1.230e-97 Identity = 198/492 (40.24%), Postives = 275/492 (55.89%), Query Frame = 1
Query: 208 VLREVFGYENFRGKQEEAMREVASGCDSLVVMPTGGGKSLCYQLPALVADGICIVVSPLIALTEDQLRGLHEKGIEAASLTSSSASQARAGAVMSDILGCTSGGGRRRHRMESPQASPEEADEEGGAPKTKLLYVTPEKLAKSSKLTAALGELASRGLVSLLAVDEAHCISSWGHDFRPAYLKLAGFRKKHLKGVPCIALTATATSEVCADIMKQLGFPKGSRILKTSFNRPEIHLSVRYKDAMDG-GALQNLVGFLRKRRGQSGIVYCHKRATAEELAKALNRALNREDVLLEDQKAFIAMPYHGKMTDADRSEAQEKFMSGDVDVITGSVAFGMGIDKANVRFVAHWDLPKSMEGLYQELGRAGRDGAPAVSVVYHSHESVSLLAFLARKPRPLTDAEKGTDAGRRKQEQAALKAVKSVEAVVAYCETQGCRRKTLLAHFGERAEGAAARGDGKRNDVCRGTCDWCGGDRDREKIAKDLL-KLSAAKAGS 1677
VL+ FG+ +FRG+QE A+ +G D V+MPTGGGKS+CYQ PAL G+ +VVSPLIAL EDQ+ L K + A L+S+ + +A + D+ G P+TKLLYVTPE +A + A L +L RGL+SL+A+DE+HCIS+WGHDFRP+Y +LA K+ L GVP +ALTATA V DI++ L + I + SFNRP I VR+KD + G ++LV L GQ IVYC R++ + LA L PYH + DA+RS + +++G + V+ ++AFGMGID+A+VR V H+++PKS+EG YQE GRAGRDG PA SV+Y+ E SL+ F+ RK ++G A + A ++ + VV YC+ GCRRK LLA+FGE + + G G CD C + + + L K+S AG+
Sbjct: 42 VLQRFFGHAHFRGQQERAVLAALNGRDCFVLMPTGGGKSVCYQCPALCGRGLALVVSPLIALMEDQVAALKRKNVPAEFLSSTQKTSLKA-EIYDDLA--------------------------SGRPETKLLYVTPELIATKGFM-AKLRKLHGRGLLSLIAIDESHCISAWGHDFRPSYGRLAAL-KEQLPGVPVMALTATANKTVQEDILRSLNLER-PLIFQASFNRPNIRYEVRFKDVLPGQDPYRDLVRLLNAEPGQCAIVYCLSRSSCDGLAARLL------------SNGIPCKPYHAGLPDAERSRTLKDWVTGRIPVVAATIAFGMGIDRADVRLVVHFNMPKSIEGFYQESGRAGRDGQPAKSVLYYGSEDESLMQFILRKEVAKMQQKQGPKAANTEH------AYEAFQEVVKYCQEAGCRRKRLLAYFGENVDVSLCEGKG---------CDACADPQKLDLMLAQLARKMSERAAGT 476
BLAST of mRNA_P-littoralis_Contig183.49.2 vs. uniprot
Match: A0A1S2XHD8_CICAR (ATP-dependent DNA helicase n=1 Tax=Cicer arietinum TaxID=3827 RepID=A0A1S2XHD8_CICAR) HSP 1 Score: 313 bits (803), Expect = 1.820e-94 Identity = 195/494 (39.47%), Postives = 283/494 (57.29%), Query Frame = 1
Query: 190 REKLLRVLREVFGYENFRGKQEEAMREVASGCDSLVVMPTGGGKSLCYQLPALVADGICIVVSPLIALTEDQLRGLHEKGIEAASLTSSSASQARAGAVMSDILGCTSGGGRRRHRMESPQASPEEADEEGGAPKTKLLYVTPEKLAKSSKLTAALGELASRGLVSLLAVDEAHCISSWGHDFRPAYLKLAGFRKKHLKGVPCIALTATATSEVCADIMKQLGFPKGSRILKTSFNRPEIHLSVRYKDAMDGGALQNLVGFLRKRRGQSGIVYCHKRATAEELAKALNRALNREDVLLEDQKAFIAMPYHGKMTDADRSEAQEKFMSGDVDVITGSVAFGMGIDKANVRFVAHWDLPKSMEGLYQELGRAGRDGAPAVSVVYHSHESVSLLAFLARKPRPLTDAEKGTDAGRRKQEQAALKAVKSVEAVVAYCETQGCRRKTLLAHFGERAEGAAARGDGKRNDVCRGTCDWCGGDRDREKIAKDLLKLSAAKA 1671
+E L+++LR FGY +FRG Q EA++ V SG D +MPTGGGKS+CYQ+PAL GI +VV PLIAL E+Q+ L EKGI A L+S+ AV D + D + G P T+LLYVTPE +A ++ L ++ SRGL+SL+A+DEAHCISSWGHDFRP+Y KL+ RK HL VP +ALTATA +V D+++ L + LKTSFNRP I+ VRYKD ++ A +L L+ GI+YC +R+ ++L+ L+ Q+ F YH + D R+ ++S ++ V+ +VAFGMGID+ +VR V H+++PKSME YQE GRAGRD P+ S++Y+ + + F+ R + ++K + +E+++ ++ + +V YCE GCRRK ++ FGE+ + +C TCD C R +A++L L+AA A
Sbjct: 24 KESLVKLLRWHFGYSDFRGMQLEAIQAVLSGRDCFCLMPTGGGKSMCYQIPALAKAGIVLVVCPLIALMENQVMALKEKGIAAEFLSSTKT------AVAKDKI---------------------YEDLDSGKPSTRLLYVTPELIATPGFMSK-LAKIYSRGLLSLIAIDEAHCISSWGHDFRPSYRKLSTLRK-HLPDVPMLALTATAVPKVQKDVVESLQMQNALK-LKTSFNRPNIYYEVRYKDLLND-AYADLSDTLKSLGDVCGIIYCLERSMCDDLSAHLS------------QRGFSCAAYHAGLNDKMRTSVLHDWISSNIKVVVATVAFGMGIDRKDVRIVCHFNIPKSMESFYQESGRAGRDQLPSTSLLYYGVDDRKRMEFILRN----SGSKKSQSSS--SKEESSRTSLTAFNQMVEYCEGSGCRRKMIIESFGEQVTAS----------LCGKTCDSC---RHPNIVARNLEDLTAACA 455
BLAST of mRNA_P-littoralis_Contig183.49.2 vs. uniprot
Match: UPI001E695C70 (ATP-dependent DNA helicase Q-like 3 isoform X1 n=2 Tax=Trifolium pratense TaxID=57577 RepID=UPI001E695C70) HSP 1 Score: 313 bits (802), Expect = 2.610e-94 Identity = 195/494 (39.47%), Postives = 283/494 (57.29%), Query Frame = 1
Query: 190 REKLLRVLREVFGYENFRGKQEEAMREVASGCDSLVVMPTGGGKSLCYQLPALVADGICIVVSPLIALTEDQLRGLHEKGIEAASLTSSSASQARAGAVMSDILGCTSGGGRRRHRMESPQASPEEADEEGGAPKTKLLYVTPEKLAKSSKLTAALGELASRGLVSLLAVDEAHCISSWGHDFRPAYLKLAGFRKKHLKGVPCIALTATATSEVCADIMKQLGFPKGSRILKTSFNRPEIHLSVRYKDAMDGGALQNLVGFLRKRRGQSGIVYCHKRATAEELAKALNRALNREDVLLEDQKAFIAMPYHGKMTDADRSEAQEKFMSGDVDVITGSVAFGMGIDKANVRFVAHWDLPKSMEGLYQELGRAGRDGAPAVSVVYHSHESVSLLAFLARKPRPLTDAEKGTDAGRRKQEQAALKAVKSVEAVVAYCETQGCRRKTLLAHFGERAEGAAARGDGKRNDVCRGTCDWCGGDRDREKIAKDLLKLSAAKA 1671
+E L+++LR FGY +FRG Q EA++ V SG D +MPTGGGKS+CYQ+PAL GI +VVSPLIAL E+Q+ L EKGI A L+S+ + A+ + D+ + G P T+LLYVTPE +A T+ L ++ SRGL+SL+A+DEAHCISSWGHDFRP+Y KL+ R HL VP +ALTATA +V D+++ L + + ILKTSFNRP I+ VRYKD ++ A +L L+ I+YC +R+ ++L+ L+ Q+ YH + + R+ E ++S V+ +VAFGMGID+ +VR V H+++PKSME YQE GRAGRD P+ S++Y+ + + F+ R + ++K + QE++ ++ + +V YCE GCRRK +L FGE+ + +C+ TCD C R +A++L L+AA A
Sbjct: 24 KESLVKLLRWHFGYSDFRGMQLEAIQTVLSGRDCFCLMPTGGGKSMCYQIPALAKVGIVLVVSPLIALMENQVMALKEKGIAAEFLSSTKTANAK-DKIYEDL--------------------------DSGKPSTRLLYVTPELIATPG-FTSKLKKIYSRGLLSLIAIDEAHCISSWGHDFRPSYRKLSNLRS-HLPDVPILALTATAAPKVQKDVVESLQM-QNALILKTSFNRPNIYYEVRYKDLLEN-AYADLSDRLKSMGDVCAIIYCLERSMCDDLSGHLS------------QRGISCAAYHAGLNNKMRTSVLEDWISSKTKVVVATVAFGMGIDRKDVRIVCHFNIPKSMEAFYQESGRAGRDQLPSTSLLYYGVDDRKRMEFILRN----SGSKKSQSSS--SQEESTRISLTAFNQMVEYCEGPGCRRKMILESFGEQVTPS----------LCKKTCDSC---RHPNIVARNLEDLTAACA 455
BLAST of mRNA_P-littoralis_Contig183.49.2 vs. uniprot
Match: A0A7N0UW09_KALFE (ATP-dependent DNA helicase n=6 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0UW09_KALFE) HSP 1 Score: 313 bits (802), Expect = 3.000e-94 Identity = 194/490 (39.59%), Postives = 278/490 (56.73%), Query Frame = 1
Query: 190 REKLLRVLREVFGYENFRGKQEEAMREVASGCDSLVVMPTGGGKSLCYQLPALVADGICIVVSPLIALTEDQLRGLHEKGIEAASLTSSSASQARAGAVMSDILGCTSGGGRRRHRMESPQASPEEADEEGGAPKTKLLYVTPEKLAKSSKLTAALGELASRGLVSLLAVDEAHCISSWGHDFRPAYLKLAGFRKKHLKGVPCIALTATATSEVCADIMKQLGFPKGSRILKTSFNRPEIHLSVRYKDAMDGGALQNLVGFLRKRRGQSGIVYCHKRATAEELAKALNRALNREDVLLEDQKAFIAMPYHGKMTDADRSEAQEKFMSGDVDVITGSVAFGMGIDKANVRFVAHWDLPKSMEGLYQELGRAGRDGAPAVSVVYHSHESVSLLAFLARKPRPLTDAEKGTDAGRRKQEQAALKAVKSVEAVVAYCETQGCRRKTLLAHFGERAEGAAARGDGKRNDVCRGTCDWCGGDRDREKIAKDLLKLS 1659
RE LL++LR FGY FRGKQ EA++ V SG D +MPTGGGKSLCYQ+PAL GI +VVSPLIAL E+Q+ L EKGI A L+S+ +QA+ +++ A+ G P +LLYVTPE LA LT L +++ +GL++L+A+DEAHCISSWGHDFRP+Y KL+ R + L VP +ALTATA +V D+M L + +L++SFNRP I+ VR+KD ++ +L L IVYC +R T EEL+ L+++ + YH + R+ + ++S + V+ +VAFGMGID+ +VR V H ++PKSMEG YQE GRAGRD PA S++Y+ E + ++ L++A G +++ + K++ + +V YCE GCRRK +L FGE+ +CR +CD C + + +AK L +L+
Sbjct: 46 REALLKLLRWHFGYAEFRGKQLEAIQTVMSGRDCFCLMPTGGGKSLCYQIPALAKTGIVLVVSPLIALMENQVAALKEKGIAAEYLSSTMTAQAK-------------------NKVHEDLAT--------GKPSLRLLYVTPELLAMPGFLTK-LTKISDKGLLNLIAIDEAHCISSWGHDFRPSYRKLSSLRDR-LPNVPILALTATAAPKVQRDVMDSLNL-RNPLVLQSSFNRPNIYYEVRFKDLLEHDTYTDLSNLLISYGDVCAIVYCLERTTCEELSIHLSKS------------GISSAAYHAGLNSKLRTSVLDDWISSKIQVVVATVAFGMGIDRKDVRVVCHINIPKSMEGFYQESGRAGRDQLPARSILYYGTEDCKKMKYI------LSNASSKGKKGGSSEDRLSEKSLSDFKLMVEYCEASGCRRKLILECFGEKVSPY----------LCRKSCDAC---KHPDMVAKYLGELA 474
BLAST of mRNA_P-littoralis_Contig183.49.2 vs. uniprot
Match: A0A6P6SQU4_COFAR (ATP-dependent DNA helicase n=7 Tax=Coffea TaxID=13442 RepID=A0A6P6SQU4_COFAR) HSP 1 Score: 310 bits (794), Expect = 3.890e-93 Identity = 195/495 (39.39%), Postives = 275/495 (55.56%), Query Frame = 1
Query: 190 REKLLRVLREVFGYENFRGKQEEAMREVASGCDSLVVMPTGGGKSLCYQLPALVADGICIVVSPLIALTEDQLRGLHEKGIEAASLTSSSASQARAGAVMSDILGCTSGGGRRRHRMESPQASPEEADEEGGAPKTKLLYVTPEKLAKS---SKLTAALGELASRGLVSLLAVDEAHCISSWGHDFRPAYLKLAGFRKKHLKGVPCIALTATATSEVCADIMKQLGFPKGSRILKTSFNRPEIHLSVRYKDAMDGGALQNLVGFLRKRRGQSGIVYCHKRATAEELAKALNRALNREDVLLEDQKAFIAMPYHGKMTDADRSEAQEKFMSGDVDVITGSVAFGMGIDKANVRFVAHWDLPKSMEGLYQELGRAGRDGAPAVSVVYHSHESVSLLAFLARKPRPLTDAEKGTDAGRRKQEQAALKAVKSVEAVVAYCETQGCRRKTLLAHFGERAEGAAARGDGKRNDVCRGTCDWCGGDRDREKIAKDLLKLSAA 1665
+E L+++LR FG+ FRGKQ EA+ V SG D +MPTGGGKSLCYQ+PAL GI +VVSPLIAL E+Q+ L KGI A L+S+ +Q ++ + DI E G P +LLYVTPE +A S SKLT ++ +R L++L+A+DEAHCIS+WGHDFRP+Y KL+ R + L G+P +ALTATA +V D+++ L +LK+SFNRP I+ VRYKD MD +L FL+ GIVYC +R T ++LA L++ YH + RS + ++S V+ +VAFGMGID+ +VR V H+++PKSME YQE GRAGRD P+ S++Y+ + + F+ L A+ Q+ + K++ +V YCE GCRRK +L FGE+ + +C TCD C +D ++K L +L++A
Sbjct: 21 KEALVKLLRWHFGHSEFRGKQLEAIEAVLSGRDCFCLMPTGGGKSLCYQIPALAKTGIVLVVSPLIALMENQVMALKAKGIAAEYLSSTQTAQVKS-KIYEDI--------------------------ESGKPSLRLLYVTPELIATSGFMSKLT----KIHARALLNLIAIDEAHCISTWGHDFRPSYRKLSSLRNR-LPGIPLLALTATAVPKVQKDVIESLSL-HNPLVLKSSFNRPNIYYEVRYKDLMDD-PYADLCNFLKSHGDICGIVYCLERTTCDDLASHLSK------------HGVTCAAYHAGLNSKLRSSILDDWISAKTQVVVATVAFGMGIDRKDVRIVCHFNIPKSMEAFYQESGRAGRDQLPSRSLLYYGVDDRKRMEFI------LGTAKNNRSRSSSLQDDTSKKSLADFRQMVEYCENSGCRRKKILESFGEQVPAS----------LCGKTCDAC---KDPHLVSKYLGELTSA 450
BLAST of mRNA_P-littoralis_Contig183.49.2 vs. uniprot
Match: UPI001CB94B93 (ATP-dependent DNA helicase Q-like 3 n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB94B93) HSP 1 Score: 309 bits (791), Expect = 8.120e-93 Identity = 193/494 (39.07%), Postives = 279/494 (56.48%), Query Frame = 1
Query: 190 REKLLRVLREVFGYENFRGKQEEAMREVASGCDSLVVMPTGGGKSLCYQLPALVADGICIVVSPLIALTEDQLRGLHEKGIEAASLTSSSASQARAGAVMSDILGCTSGGGRRRHRMESPQASPEEADEEGGAPKTKLLYVTPEKLAKS---SKLTAALGELASRGLVSLLAVDEAHCISSWGHDFRPAYLKLAGFRKKHLKGVPCIALTATATSEVCADIMKQLGFPKGSRILKTSFNRPEIHLSVRYKDAMDGGALQNLVGFLRKRRGQSGIVYCHKRATAEELAKALNRALNREDVLLEDQKAFIAMPYHGKMTDADRSEAQEKFMSGDVDVITGSVAFGMGIDKANVRFVAHWDLPKSMEGLYQELGRAGRDGAPAVSVVYHSHESVSLLAFLARKPRPLTDAEKGTDAGRRKQEQAALKAVKSVEAVVAYCETQGCRRKTLLAHFGERAEGAAARGDGKRNDVCRGTCDWCGGDRDREKIAKDLLKLSA 1662
+E L ++LR FG+ ++RG Q +A++ V SG D +MPTGGGKS+CYQ+PAL GI +VVSPLIAL E+Q+ L EKG+ A L+S+ +Q R + I G + E G P +LLYVTPE +A + SKLT +L RGL++L+A+DEAHCIS+WGHDFRP+Y KLA RK+ L VP +ALTATA +V AD+++ L + +LK+SFNRP I+ VR+KD + + +L ++ R GIVYC +R T ++LA L+R YH + + R+ + ++S V+ +VAFGMGID+ +VR V H+++PKSM YQE GRAGRD P+ SV+Y+ + + + F+ K G+ Q++++ K++ +V YCET GCRRK +L FGE+ +C+ TCD C +D + K L +L A
Sbjct: 17 KEALTKLLRWHFGHSDYRGTQLDAIQSVLSGRDCFCLMPTGGGKSICYQIPALAKPGIVLVVSPLIALMENQVTALKEKGVAAEYLSSTQTTQDR-----NKING----------------------ELESGKPAIRLLYVTPELIATTGFMSKLT----KLHERGLLNLIAIDEAHCISTWGHDFRPSYRKLASLRKR-LPDVPILALTATAVPKVQADVIESLNM-ENPLVLKSSFNRPNIYYEVRFKDLLTDPYV-DLTNLIKSRGDVCGIVYCLERTTCDDLASHLSR------------NGISCAAYHAGLNNKLRTSVLDSWISAKTQVVVATVAFGMGIDRKDVRIVCHFNIPKSMVSFYQESGRAGRDQKPSRSVLYYGIDDRNKMQFILNKEESKKLQSTGS------QDESSKKSLDDFNLMVEYCETSGCRRKKILDGFGEQVS----------TSLCKKTCDSC---KDSNLVMKYLEELKA 445
BLAST of mRNA_P-littoralis_Contig183.49.2 vs. uniprot
Match: A0A0D2PBS2_GOSRA (ATP-dependent DNA helicase n=1 Tax=Gossypium raimondii TaxID=29730 RepID=A0A0D2PBS2_GOSRA) HSP 1 Score: 303 bits (777), Expect = 1.600e-92 Identity = 192/494 (38.87%), Postives = 273/494 (55.26%), Query Frame = 1
Query: 190 REKLLRVLREVFGYENFRGKQEEAMREVASGCDSLVVMPTGGGKSLCYQLPALVADGICIVVSPLIALTEDQLRGLHEKGIEAASLTSSSASQARAGAVMSDILGCTSGGGRRRHRMESPQASPEEADEEGGAPKTKLLYVTPEKLAKSSKLTAALGELASRGLVSLLAVDEAHCISSWGHDFRPAYLKLAGFRKKHLKGVPCIALTATATSEVCADIMKQLGFPKGSRILKTSFNRPEIHLSVRYKDAMDGGALQNLVGFLRKRRGQSGIVYCHKRATAEELAKALNRALNREDVLLEDQKAFIAMPYHGKMTDADRSEAQEKFMSGDVDVITGSVAFGMGIDKANVRFVAHWDLPKSMEGLYQELGRAGRDGAPAVSVVYHSHESVSLLAFLARKPRPLTDAEKGTDAGRRKQEQAALKAVKSVEAVVAYCETQGCRRKTLLAHFGERAEGAAARGDGKRNDVCRGTCDWCGGDRDREKIAKDLLKLSAAKA 1671
RE L+++LR FG+ +FRG Q EA+ + SG D +MPTGGGKS+CYQ+PAL GI +V+SPLIAL E+Q+ L EKGI A L+S+ SQ R + H D + G P +LLYVTPE +A S ++ L ++ RGL++L+AVDEAHCISSWGHDFRP+Y KL+ R + L+ VP +ALTATA +V D++ L + +LK+SFNRP I+ VRYKD MD A +L L+ IVYC +R T ++L+ L++ YH + + RS + ++ + V+ +VAFGMGID+ +VR V H+++PKSME YQE GRAGRD P+ S++Y+ + + F+ L+ AE Q + K+ +V YCE GCRRK +L FGE + +C+ +CD C + +AK L++L+ A A
Sbjct: 22 REALVKLLRWNFGHPDFRGNQLEAIEAILSGRDCFCLMPTGGGKSMCYQIPALAKTGIVLVISPLIALMENQVMALKEKGIAAEFLSSTQTSQLR----------------NKIHE-----------DLDRGQPSIRLLYVTPELIATSGFMSK-LKKIHGRGLLNLIAVDEAHCISSWGHDFRPSYRKLSSLRNQ-LQDVPILALTATAIPKVQKDVIDSLNL-QNPLVLKSSFNRPNIYYEVRYKDLMDD-AYADLCDVLKSAGDVCAIVYCLERTTCDDLSTHLSK------------NGISCAAYHAGLNNKLRSSVLDDWICSKIQVVVATVAFGMGIDRKDVRIVCHFNIPKSMEAFYQESGRAGRDQLPSRSLLYYGVDDRKRMEFI------LSIAESKKLQSSDSQHGLSKKSTSDFNLMVEYCEGSGCRRKKILESFGEEVSAS----------LCKKSCDAC---KHPNLVAKYLVELTTAIA 453 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig183.49.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig183.49.2 >prot_P-littoralis_Contig183.49.2 ID=prot_P-littoralis_Contig183.49.2|Name=mRNA_P-littoralis_Contig183.49.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=576bp PPAQGRALLVQQLCVAAVRFVNLEHVTVTTRAGGEREREIRGGVPSNKMAback to top mRNA from alignment at P-littoralis_Contig183:236100..254914+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig183.49.2 ID=mRNA_P-littoralis_Contig183.49.2|Name=mRNA_P-littoralis_Contig183.49.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=18815bp|location=Sequence derived from alignment at P-littoralis_Contig183:236100..254914+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig183:236100..254914+ >mRNA_P-littoralis_Contig183.49.2 ID=mRNA_P-littoralis_Contig183.49.2|Name=mRNA_P-littoralis_Contig183.49.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1728bp|location=Sequence derived from alignment at P-littoralis_Contig183:236100..254914+ (Pylaiella littoralis U1_48)back to top |