mRNA_P-littoralis_Contig182.58.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig182.58.2
Unique NamemRNA_P-littoralis_Contig182.58.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig182.58.2 vs. uniprot
Match: D8LLY5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLY5_ECTSI)

HSP 1 Score: 494 bits (1273), Expect = 1.640e-163
Identity = 260/352 (73.86%), Postives = 287/352 (81.53%), Query Frame = 3
Query:   78 AMSEPHL-PPEDVGASARRRGRQETETGAFFVRIGKLFAAGTVGGLVECIAAYPLDTVKTRMQTAQVGSSGGALRCFTSAVRDDGALSLYRGVSSRLVASMIAASVMFGANGTLREVFAADSRQPLSGRFLLAAAGTGVLEAIAYCPLELVKTRMQVLRGSPTGVTVWSTGLQIYRQHGLFKGCYRGFSSTLLKEGLGNTVYFGSYELCKQAFAGGGSAAGVQGAEG------------DQQPGVWPIVGAGGCAGVLYTAATHPIDTVKSLVQTDSIDAPRYRGFLDGWQQVLAQ--RGGXXXXXXXXXXXXGVKGFLGLYRGLSPAIARAFVGNSILFLTYESVLDVLGR 1088
            AM EP+L PP+DVGASA RRG QETETGAF +RIGKL  AGT+GGL EC+AAYPLDTVKTRMQT++  SSGGA RCF++A+R+DGAL+LYRG+SSR+VASM+AASV+FGANGTL+EVF ADS QPLSGRF+LAA GTGVLEAIAYCPLELVKTRMQVLRGSP GVTVW+TG QIYR HG+FKG Y+GFSS LLKEGLGNTVYFGSYELCKQA  GG S  G  G+               +Q G+ PIV AGGCAGVLYT ATHPIDTVKSLVQTDSI APRYRGFLDGW+Q LAQ  R              GVK FLGLYRGLSPAIARAF+GNS LF+TYESVLDVLGR
Sbjct:   26 AMGEPYLSPPDDVGASASRRGPQETETGAFLLRIGKLSVAGTIGGLAECMAAYPLDTVKTRMQTSEAASSGGAFRCFSTAIREDGALALYRGMSSRVVASMLAASVLFGANGTLKEVFGADSSQPLSGRFMLAAMGTGVLEAIAYCPLELVKTRMQVLRGSPAGVTVWTTGAQIYRHHGIFKGSYKGFSSMLLKEGLGNTVYFGSYELCKQAL-GGRSTGGAVGSGXXXXXXXXXXXXHQEQAGIGPIVAAGGCAGVLYTVATHPIDTVKSLVQTDSIKAPRYRGFLDGWRQALAQGRRRHGVGRGDGAGAVGGVKAFLGLYRGLSPAIARAFLGNSALFVTYESVLDVLGR 376          
BLAST of mRNA_P-littoralis_Contig182.58.2 vs. uniprot
Match: A0A8K1CMY7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CMY7_PYTOL)

HSP 1 Score: 174 bits (442), Expect = 7.650e-45
Identity = 117/318 (36.79%), Postives = 165/318 (51.89%), Query Frame = 3
Query:  180 KLFAAGTVGGLVECIAAYPLDTVKTRMQTAQVGSS---GGALRCFTSAVRDDGALSLYRGVSSRLVASMIAASVMFGANGTLREVFAADSRQPLSGRFLLAAA-GTGVLEAIAYCPLELVKTRMQV-LRGSPTGVTVWSTGLQIYRQHGLFKGCYRGFSSTLLKEGLGNTVYFGSYELCKQAFAGGGSAAGVQGAEGDQQPGVWP----------IVGAGGCAGVLYTAATHPIDTVKSLVQTDSIDAPRYRGFLDGWQQVLAQRGGXXXXXXXXXXXXGVKGFLGLYRGLSPAIARAFVGNSILFLTYESVLDVLGR 1088
            K F +G VGG  E +  YPL+TVK RMQT +  S     G + C   +VRD G  SLYRG + ++  S I+AS++FG  G  R  ++    +      L+AAA  TG  EAI Y P E++K RMQ     + T ++ W    ++Y Q+G+ +G YRGF  T  +E LGN+ YF +YE  K+          +     D  P + P          I  AGG AG +Y  A  PIDTVKS++Q D +D PRY+G +D  ++ L Q GG                    YRG+SP++ RAF  N+I F+ +E+ L  L +
Sbjct:   17 KNFISGIVGGGCEAVVGYPLETVKARMQTQKTSSGRSFSGPIDCLQQSVRDGGMASLYRGATPQIFRSAISASILFGLVGQYRYFYSKYVFEDKPRTALVAAATSTGFTEAILYTPFEIIKVRMQTQYANARTRISNWQCVREVYGQNGI-RGLYRGFIPTAQREMLGNSAYFLAYETGKEF---------LMDILVDNSPHLTPEQEHFRTYQAIAAAGGYAGFMYWLAVFPIDTVKSVMQADRLDKPRYQGVMDCCRK-LYQEGGATR----------------FYRGISPSLIRAFPANAITFVAFETCLSFLDK 307          
BLAST of mRNA_P-littoralis_Contig182.58.2 vs. uniprot
Match: A0A5D6XLB4_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XLB4_9STRA)

HSP 1 Score: 167 bits (422), Expect = 5.910e-42
Identity = 119/335 (35.52%), Postives = 163/335 (48.66%), Query Frame = 3
Query:  108 DVGASARRRGRQETETGAFFVRIGKLFAAGTVGGLVECIAAYPLDTVKTRMQTAQVGSSGGALRCFTSAVRDDGALSLYRGVSSRLVASMIAASVMFGANGTLRE---VFAADSRQPLSGRFLLAAAG--TGVLEAIAYCPLELVKTRMQVLRG-SPTGVTVWSTGLQIYRQHGLFKGCYRGFSSTLLKEGLGNTVYFGSYELCKQ----AFAGGGSAAGVQGAEGDQQPGVWPIVGAGGCAGVLYTAATHPIDTVKSLVQTDSIDAPRYRGFLDGWQQVLAQRGGXXXXXXXXXXXXGVKGFLGLYRGLSPAIARAFVGNSILFLTYESVLDVL 1082
            D  A   R         +  V   K F +GTV G  E +  YPL+TVK RMQT +  +  G L C   +VR+ G  SLYRG S ++  S ++ASV+FG  G  R     +  D++     +F L AAG  TG+ E+  Y P E++K RMQ     S T V+ W    ++Y Q G+ +G YRG      +E LGNT YF +YE  K+     F      A     E         I  AGG AG +Y     P+DTVKS++Q DS+  PRYRG  D  Q+ L Q GG                     RG+SP++ RAF  N++ F+ +E+ +  L
Sbjct:   15 DASADTGRHSHGAANAQSLAVITAKNFVSGTVAGACEAVVGYPLETVKARMQTEKAQAFSGPLDCMRKSVREGGVASLYRGASPQIFRSAVSASVLFGLMGQYRHFYNTYVFDNKP----QFGLVAAGMSTGLTESFLYTPFEIIKIRMQTQHTHSRTRVSNWQCVKEVYSQGGV-RGMYRGVVPYAQREMLGNTAYFMAYEFAKEYLLERFV---HRAPPMTPEKAHVRTYQAIALAGGYAGFMYWVVVFPVDTVKSVMQADSLTHPRYRGVWDCAQK-LYQEGGPAR----------------FVRGISPSLLRAFPANAVTFVAFETCMSFL 324          
BLAST of mRNA_P-littoralis_Contig182.58.2 vs. uniprot
Match: D0MUE5_PHYIT (Mitochondrial Carrier (MC) Family n=13 Tax=Phytophthora TaxID=4783 RepID=D0MUE5_PHYIT)

HSP 1 Score: 164 bits (415), Expect = 6.180e-41
Identity = 104/316 (32.91%), Postives = 153/316 (48.42%), Query Frame = 3
Query:  180 KLFAAGTVGGLVECIAAYPLDTVKTRMQTAQVGSSG--GALRCFTSAVRDDGALSLYRGVSSRLVASMIAASVMFGANGTLREVFAADSRQPLSGRFLLAAAGTGVLEAIAYCPLELVKTRMQVLRG-SPTGVTVWSTGLQIYRQHGLFKGCYRGFSSTLLKEGLGNTVYFGSYELCKQAFAGGGSAAGVQGAEGDQQPGVWP----------IVGAGGCAGVLYTAATHPIDTVKSLVQTDSIDAPRYRGFLDGWQQVLAQRGGXXXXXXXXXXXXGVKGFLGLYRGLSPAIARAFVGNSILFLTYESVLDVLGR 1088
            K F +GT+GG  E    YPL+TVK RMQT Q  S    G + C    +++ G  SLYRG S ++  S ++AS+MFG  G  R  ++           + A   TG  E + Y P E++K RMQ L G + T ++ W     +Y ++G+  G YRGF  T  +E LGN  YF +YE  K                    PG+ P          I  +GGCAG +Y     P+DTVKS++Q D +D PR+ G  D  +Q+ A+ G                     Y+G++P++ RAF  N++ F+ +E  +  L +
Sbjct:   46 KNFVSGTMGGGCEAFVGYPLETVKARMQTQQNNSRAFTGPVDCLKKTLQEGGVSSLYRGASPQIFRSAMSASIMFGLMGQYRYFYSKTLFDNPDYALIAAGVSTGFTEGMLYTPFEIIKVRMQTLYGGTKTRISNWQCVRDVYSRNGV-GGLYRGFWPTAGREMLGNAAYFMAYETTKDLLLNRFV---------HNVPGLSPEAANLRTYQSIAFSGGCAGFMYWLVVFPVDTVKSVLQADRLDKPRFNGITDCCRQLYAEGGPTR-----------------FYKGITPSLLRAFPANAVTFVAFEKTMSFLNQ 334          
BLAST of mRNA_P-littoralis_Contig182.58.2 vs. uniprot
Match: A0A485KY00_9STRA (Aste57867_13206 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KY00_9STRA)

HSP 1 Score: 163 bits (413), Expect = 6.850e-41
Identity = 114/318 (35.85%), Postives = 164/318 (51.57%), Query Frame = 3
Query:  186 FAAGTVGGLVECIAAYPLDTVKTRMQT------AQVGSSGGALRCFTSAVRDDGALSLYRGVSSRLVASMIAASVMFGANGTLREVF--AADSRQPLSGR------FLLAAAGTGVLEAIAYCPLELVKTRMQVLRGSPTGVTVWSTGLQIYRQHGLFKGCYRGFSSTLLKEGLGNTVYFGSYELCKQAFAGGGSAAGVQGAEGDQQPGVWPIVG-AGGCAGVLYTAATHPIDTVKSLVQTDSIDAP--RYRGFLDGWQQVLAQRGGXXXXXXXXXXXXGVKGFLGLYRGLSPAIARAFVGNSILFLTYESVLDVLGR 1088
            F  GTV G+   I  YPLDT+K+R+QT      A +G S   L  F  +VR++G LSLYRG S+++  S I  S++FG     + +F   +D   P S           +AA TGV+E+I YCP E+   RMQ    S    T+      IY ++GL +G YRGF  T  +E +GNTVYF SYE  K       +   +Q            I G +G  AGV+Y + + P+DTVKS++Q D++D    +Y+GF D  +Q+ A+                V  F   +RGLSP + RA   N++ F+++E  + VL R
Sbjct:   19 FLGGTVAGVTGAIVGYPLDTIKSRVQTQKHSFAATLGHSATPLEAFVQSVRNEGFLSLYRGASTQVARSAIGCSILFGLMAQFKILFYTPSDMSMPRSDEAHPKTVLAASAACTGVVESIIYCPFEITMIRMQTTESSKQTTTL-QCAKNIYSRYGLQRGLYRGFVPTCSREMVGNTVYFLSYERIKTMLQAQTNLTDMQ------------IYGTSGAAAGVVYWSISFPLDTVKSVIQADAMDPHMRKYKGFGDCVKQLYAE--------------GKVARF---FRGLSPCLIRAMPVNAVQFMSFEKSVQVLTR 306          
BLAST of mRNA_P-littoralis_Contig182.58.2 vs. uniprot
Match: G4ZA61_PHYSP (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4ZA61_PHYSP)

HSP 1 Score: 164 bits (414), Expect = 8.190e-41
Identity = 108/320 (33.75%), Postives = 156/320 (48.75%), Query Frame = 3
Query:  180 KLFAAGTVGGLVECIAAYPLDTVKTRMQTAQVGSSG--GALRCFTSAVRDDGALSLYRGVSSRLVASMIAASVMFGANGTLREVFAADSRQPLSGRFLLAAAGTGVLEAIAYCPLELVKTRMQVLRGSP-TGVTVWSTGLQIYRQHGLFKGCYRGFSSTLLKEGLGNTVYFGSYELCKQAFAGGGSAAGVQGAEGDQ----QPGVWP----------IVGAGGCAGVLYTAATHPIDTVKSLVQTDSIDAPRYRGFLDGWQQVLAQRGGXXXXXXXXXXXXGVKGFLGLYRGLSPAIARAFVGNSILFLTYESVLDVLGR 1088
            K F +GT+GG  E I  YPL+TVK RMQT Q GS    G   C   +++  G  SLYRG S ++  S ++AS+MFG  G  R  ++           + A   TG  E + Y P E +K RMQ + G   T ++ W     +Y ++G+  G YRGF  T  +E LGN  YF +YE  K+                D+     PG+ P          I  +GG AG +Y     P+DTVKS++Q D +D PR+ G  D  +Q+ A+               G K F   YRG++P++ RAF  N++ F+ +E  +  L +
Sbjct:   45 KNFVSGTMGGGCEAIVGYPLETVKARMQTQQSGSKAFAGPFDCLKKSIQQGGVTSLYRGASPQVFRSAMSASIMFGLMGQYRYFYSKTLFDNPDYSLIAAGFSTGFTEGLLYTPFETIKVRMQTMYGDTRTRISNWQCVKDVYSRNGV-GGLYRGFWPTASREMLGNVTYFMAYEATKERML-------------DRFVHNVPGLSPESVNLRTYQSIAFSGGFAGFMYWLVVFPVDTVKSVLQADRLDKPRFSGVADCCRQLYAE--------------GGPKRF---YRGITPSLLRAFPANAVTFVAFEKTMSFLNQ 333          
BLAST of mRNA_P-littoralis_Contig182.58.2 vs. uniprot
Match: A0A067CGH3_SAPPC (Uncharacterized protein (Fragment) n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CGH3_SAPPC)

HSP 1 Score: 156 bits (394), Expect = 1.570e-38
Identity = 113/309 (36.57%), Postives = 163/309 (52.75%), Query Frame = 3
Query:  186 FAAGTVGGLVECIAAYPLDTVKTRMQTAQVG-SSGGALRCFTSAVRDDGALSLYRGVSSRLVASMIAASVMFGANGTLREVF----AADSRQPLSGRFLLAAAG--TGVLEAIAYCPLELVKTRMQVLRGSPTGVTVWSTGLQIYRQHGLFKGCYRGFSSTLLKEGLGNTVYFGSYELCKQAFAGGGSAAGVQGAEGDQQPGVWPIVGAGGCAGVLYTAATHPIDTVKSLVQTDSIDAPR---YRGFLDGWQQVLAQRGGXXXXXXXXXXXXGVKGFLGLYRGLSPAIARAFVGNSILFLTYESVLDVL 1082
            F +GTV G+   I  YPLDTVK+R+QT   G +S   L+C   +VR +G LSLYRG SS++  S I  S +FG     + +F    A D       + +L AA   TG++EA+ Y P E+   RMQ    S   VT      QI+  +GL  G YRGF  T  +E +GNT YF +YE  K       S   ++    D +  V+   GA   AG++Y   + P+DT+KS++Q D++D PR   YRGF D   ++ A+               GV+ F   +RGLSP + RA   N++ F+++E  +D+L
Sbjct:   10 FFSGTVAGVTGAIVGYPLDTVKSRIQTQMHGGASASPLQCLVQSVRSEGFLSLYRGASSQVARSAIGCSFLFGLMAQFKYLFYTPSAGDGSPEKHPKLVLTAAASCTGLVEAMLYTPFEITMIRMQTQATSQ--VTTLQQARQIFASYGLRSGLYRGFVPTCYREMIGNTSYFFTYEKTKDVLQ---SQTILRRPLTDLE--VYGYSGA--VAGLMYWCISFPLDTIKSVIQADALD-PRLRKYRGFHDCVLKLYAE--------------DGVRRF---FRGLSPCLVRAMPVNAVQFISFEKSVDLL 291          
BLAST of mRNA_P-littoralis_Contig182.58.2 vs. uniprot
Match: A0A024G8Y6_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G8Y6_9STRA)

HSP 1 Score: 157 bits (397), Expect = 2.080e-38
Identity = 115/320 (35.94%), Postives = 164/320 (51.25%), Query Frame = 3
Query:  180 KLFAAGTVGGLVECIAAYPLDTVKTRMQTAQVGSSG-----GALRCFTSAVRDDGALSLYRGVSSRLVASMIAASVMFGANGTLREVFAADSRQPLSGRFLL--AAAGTGVLEAIAYCPLELVKTRMQV----LRGSPTGVTVWSTGLQIYRQHGLFKGCYRGFSSTLLKEGLGNTVYFGSYELCKQAFAG--GGSAAGVQGAEGDQQPGVWPIVGA----GGCAGVLYTAATHPIDTVKSLVQTDSIDAPRYRGFLDGWQQVLAQRGGXXXXXXXXXXXXGVKGFLGLYRGLSPAIARAFVGNSILFLTYESVLDVLGR 1088
            K  A+G + G  E +A YPL+TVK RMQT    ++G     G + C   +VRD G  SLYRG   +++ S I+ASV+FG  G  R  F   +      RF L  AA  TG+ E+  Y P E++K RMQ      R   + V        +YRQ GL +G YRG      KE LGN  YF +YE  K           +  Q ++ D +   +   GA    GG AG++Y  A  PIDTVKS++Q D++  P+YRG +D  +++  ++G              VK F   Y+G+SP + RAF  N+I F+ +E+ L+ L +
Sbjct:   49 KNLASGIIAGSCEALAGYPLETVKARMQTQPRRANGLPYYSGMIDCVQQSVRDGGIASLYRGALPQIIRSAISASVLFGLMGQYRYYFDTQTLFRERPRFSLVFAAMSTGLTESFLYTPFEVIKIRMQTQCTHTRKRTSNVACMKA---VYRQSGL-RGFYRGMLPMAKKEMLGNAAYFVAYESSKTYLTELLYTMQSKHQTSDFDSKDQRFKTYGAIATAGGIAGLVYWLAVFPIDTVKSVMQADTLQNPKYRGVIDCCEKLYREQG--------------VKRF---YQGISPTLIRAFPANAITFVAFETSLNFLNQ 347          
BLAST of mRNA_P-littoralis_Contig182.58.2 vs. uniprot
Match: H3H2I0_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H2I0_PHYRM)

HSP 1 Score: 153 bits (387), Expect = 4.470e-37
Identity = 106/336 (31.55%), Postives = 157/336 (46.73%), Query Frame = 3
Query:  180 KLFAAGTVGGLVECIAAYPLDTVKTRMQTAQVGSSG--GALRCFTSAVRDDGALSLYRGVSSRLVAS----------------MIAASVMFGANGTLREVFAADSRQPLSGRFLLAAAGTGVLEAIAYCPLELVKTRMQVLRGSP-TGVTVWSTGLQIYRQHGLFKGCYRGFSSTLLKEGLGNTVYFGSYELCKQAFAGGGSAAGVQGAEGDQQ----PGVWP----------IVGAGGCAGVLYTAATHPIDTVKSLVQTDSIDAPRYRGFLDGWQQVLAQRGGXXXXXXXXXXXXGVKGFLGLYRGLSPAIARAFVGNSILFLTYESVLDVLGR 1088
            K F +GT+GG  E +  YPL+TVK RMQT Q G     G L C   ++++ G +SLYRG S ++  S                 I ASVMFG  G  R  ++       +   + A   TG  E + Y P +++K RMQ L G   T ++       +Y ++G+  G YRGF  T  +E LGN  YF +YE  +                 D+     PG+ P          I  +GGCAG +Y     P+DTVKS++Q D +D PR+ G +D  +Q+ A+ G                     YRG++P++ RAF  N++ F+ +E  +  L +
Sbjct:   44 KNFLSGTMGGGCEAVVGYPLETVKARMQTQQSGPGAFSGPLDCLKKSLQEGGVMSLYRGASPQIFRSAMRYWDTISEFEQGIAQIFASVMFGLMGQYRYFYSKTLFDNANYALVAAGVSTGFTEGLLYTPFDVIKVRMQTLYGGTRTRISNLQCVKDVYSRNGV-GGLYRGFWPTAGREMLGNATYFMAYETVRDLLL-------------DRLVHSVPGLTPESVNLRTYQSIAFSGGCAGFMYWLVVFPVDTVKSVLQADRLDKPRFSGAIDCSRQLYAEGGPTR-----------------FYRGITPSLLRAFPANAVTFVAFEKTMSFLNQ 348          
BLAST of mRNA_P-littoralis_Contig182.58.2 vs. uniprot
Match: A0A662XLN0_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XLN0_9STRA)

HSP 1 Score: 153 bits (386), Expect = 6.350e-37
Identity = 110/356 (30.90%), Postives = 159/356 (44.66%), Query Frame = 3
Query:  117 ASARRRGRQETETGAFFVRIGKLFAAGTVGGLVECIAAYPLDTVKTRMQTAQVGSSG-----GALRCFTSAVRDDGALSLYRGVSSRLVASMI----------------AASVMFGANGTLREVFAADSRQPLSGRFLLAAAGTGVLEAIAYCPLELVKTRMQVLRGSPTG-VTVWSTGLQIYRQHGLFKGCYRGFSSTLLKEGLGNTVYFGSYELCKQAFAGGGSAAGVQGAEGDQQPGVWP----------IVGAGGCAGVLYTAATHPIDTVKSLVQTDSIDAPRYRGFLDGWQQVLAQRGGXXXXXXXXXXXXGVKGFLGLYRGLSPAIARAFVGNSILFLTYESVLDVLGR 1088
            AS+      +T+  +  V   K F +G VGG  E +  YPL+TVK RMQT Q  +       G   C   ++++ G  SLYRG S ++  S I                AAS+MFG  G  R  ++           + A   TG  E + Y P E++K RMQ    +    V+ W     +Y ++GL  G YRGF+ T  +E LGN  YF +YE  K+                 + P + P          I  AGGCAG +Y     P+DTVKS++Q D +D PRY G  D  +Q+  + G                     YRG+SP++ RAF  N++ F+ +E  +  L +
Sbjct:   22 ASSASDASDKTKEQSLAVVTVKNFVSGIVGGGCEAVVGYPLETVKARMQTQQAAAGSARAFTGPFDCLQKSLKEGGVGSLYRGASPQIFRSAIRYRRIAPCLFVFGICAAASIMFGLMGQYRYFYSQTLFDNPDYSLIAAGVSTGFTEGLLYTPFEIIKIRMQTQYSNTRNRVSNWQCVKDVYGRNGL-GGLYRGFAPTAGREMLGNATYFMAYETAKELLLDRFV---------HRVPELSPEKAHLRTYQSIAFAGGCAGFMYWLVVFPVDTVKSVMQADRLDKPRYSGVADCCRQLYVEGGPVR-----------------FYRGISPSLMRAFPANAVTFVAFEKCMSFLNQ 350          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig182.58.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLY5_ECTSI1.640e-16373.86Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A8K1CMY7_PYTOL7.650e-4536.79Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6XLB4_9STRA5.910e-4235.52Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
D0MUE5_PHYIT6.180e-4132.91Mitochondrial Carrier (MC) Family n=13 Tax=Phytoph... [more]
A0A485KY00_9STRA6.850e-4135.85Aste57867_13206 protein n=1 Tax=Aphanomyces stella... [more]
G4ZA61_PHYSP8.190e-4133.75Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
A0A067CGH3_SAPPC1.570e-3836.57Uncharacterized protein (Fragment) n=2 Tax=Saprole... [more]
A0A024G8Y6_9STRA2.080e-3835.94Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
H3H2I0_PHYRM4.470e-3731.55Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A662XLN0_9STRA6.350e-3730.90Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig182contigP-littoralis_Contig182:208405..219417 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LLY5
PFAMsMito_carr
Model size3083
Max annot lvl2759|Eukaryota
KEGG koko:K15109
KEGG TC2.A.29.8
KEGG Pathwayko04714,map04714
Hectar predicted targeting categoryother localisation
Exons7
Evalue8.91e-174
EggNOG OGsKOG0762@1|root,KOG0762@2759|Eukaryota
Ec32 ortholog descriptionMitochondrial carrier domain
Ec32 orthologEc-14_002120.1
DescriptionBelongs to the mitochondrial carrier (TC 2.A.29) family
Cds size1011
COG categoryU
BRITEko00000,ko00001,ko02000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig182.58.2prot_P-littoralis_Contig182.58.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig182 210397..219337 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789878.9673333-UTR-P-littoralis_Contig182:208404..2103961680789878.9673333-UTR-P-littoralis_Contig182:208404..210396Pylaiella littoralis U1_48UTRP-littoralis_Contig182 208405..210396 -
1680789879.048126-UTR-P-littoralis_Contig182:219337..2194171680789879.048126-UTR-P-littoralis_Contig182:219337..219417Pylaiella littoralis U1_48UTRP-littoralis_Contig182 219338..219417 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789878.978261-CDS-P-littoralis_Contig182:210396..2107801680789878.978261-CDS-P-littoralis_Contig182:210396..210780Pylaiella littoralis U1_48CDSP-littoralis_Contig182 210397..210780 -
1680789878.9872208-CDS-P-littoralis_Contig182:211527..2116141680789878.9872208-CDS-P-littoralis_Contig182:211527..211614Pylaiella littoralis U1_48CDSP-littoralis_Contig182 211528..211614 -
1680789878.9993954-CDS-P-littoralis_Contig182:213150..2132281680789878.9993954-CDS-P-littoralis_Contig182:213150..213228Pylaiella littoralis U1_48CDSP-littoralis_Contig182 213151..213228 -
1680789879.0101812-CDS-P-littoralis_Contig182:213943..2140391680789879.0101812-CDS-P-littoralis_Contig182:213943..214039Pylaiella littoralis U1_48CDSP-littoralis_Contig182 213944..214039 -
1680789879.0215232-CDS-P-littoralis_Contig182:214974..2150741680789879.0215232-CDS-P-littoralis_Contig182:214974..215074Pylaiella littoralis U1_48CDSP-littoralis_Contig182 214975..215074 -
1680789879.0297937-CDS-P-littoralis_Contig182:216311..2164621680789879.0297937-CDS-P-littoralis_Contig182:216311..216462Pylaiella littoralis U1_48CDSP-littoralis_Contig182 216312..216462 -
1680789879.0383968-CDS-P-littoralis_Contig182:219222..2193371680789879.0383968-CDS-P-littoralis_Contig182:219222..219337Pylaiella littoralis U1_48CDSP-littoralis_Contig182 219223..219337 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig182.58.2

>prot_P-littoralis_Contig182.58.2 ID=prot_P-littoralis_Contig182.58.2|Name=mRNA_P-littoralis_Contig182.58.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=337bp
MSEPHLPPEDVGASARRRGRQETETGAFFVRIGKLFAAGTVGGLVECIAA
YPLDTVKTRMQTAQVGSSGGALRCFTSAVRDDGALSLYRGVSSRLVASMI
AASVMFGANGTLREVFAADSRQPLSGRFLLAAAGTGVLEAIAYCPLELVK
TRMQVLRGSPTGVTVWSTGLQIYRQHGLFKGCYRGFSSTLLKEGLGNTVY
FGSYELCKQAFAGGGSAAGVQGAEGDQQPGVWPIVGAGGCAGVLYTAATH
PIDTVKSLVQTDSIDAPRYRGFLDGWQQVLAQRGGGGGGGGGGGSGGGVK
GFLGLYRGLSPAIARAFVGNSILFLTYESVLDVLGR*
back to top

mRNA from alignment at P-littoralis_Contig182:208405..219417-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig182.58.2 ID=mRNA_P-littoralis_Contig182.58.2|Name=mRNA_P-littoralis_Contig182.58.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=11013bp|location=Sequence derived from alignment at P-littoralis_Contig182:208405..219417- (Pylaiella littoralis U1_48)
TTCCTATCCATGTTCTCCACAGCAGGAGAAGTCGGTGTGGTAGCGTCTCT TCTCATGACACAGTAGAGTCATAGGATGCGATGAGTGAACCACACCTGCC TCCGGAAGATGTTGGAGCCAGTGCTCGCCGCAGGGGACGGCAAGAAACAG AGACGGGGGCCTTCTTTGTGCGCATCGGCAAGCTGTTCGCTGCAGGTGTA TGGTATGGTGTAAAGTCAGAGGCAAGAGGGAACGGACATCGAACACTCGC AACACAAAAGCGTCCAGTCAGCAGTGTTGCTGGATGCCCCTTCCCTGGTA CTGCTGCAACACACCCTCGGTTAACAGATAAGCAAGCGTTAATTGGGGTG CTTCACCCATAGTAGACACCCAGTACCATCTGCACGACGATCGCCAAGGT ACGATGCAGCAAGAGCTGCCGGAGCTGTCAGCGAATGATTGGTAGCAGCC ATGAGCAGCAGTTCAGCACTGAAGATGTGCAACAACAGCAGCAGGCACTA CTACTTGTACACCCATATGATAGGTTACCGCCGTTGGCCGTAGATAAATT TGGTACAGTACCGGGGTGTCTCAGTGTCGATGTGCTTCCTTATCTTTTTG TTTCCAACGTTTCAGCTACGTTACAACTAACCCTGCTTCTCACAGACAGC AGTAGTAGTGACACACCTACGATGTGTCCGCTTTAGCAACGAACACACTT TCTTATAATACTCGGAGTACACATCATCAGATAAAGTTACCGTTCGTTGC AGCTCTCCGGAGGCTATTATATCAGGTCAACAAGATAACTTGGGAGTCGT CTTGTGTAGCACACGATACACGTCTATGTGCGTGCGCTGTCAAGCTATCT TTTACCGGTGTAGAGATGAGATACACAGAAGGTGCTGTAGCCAGTAAATG GCAGCAAATATATTGACAATCGTCTTCAGCGTTCTTTCATAGAGCACTTG GATCATTGCGTAGTTCTTCTTGGCCGCAAGAACACGCGAGAAACATCAAC AAGAACTCTGCTGTAAGGTCGAGACGACATAAGACCCCATGCCGCGGCAT TGGACCCACCCGCACTTGTTTGTTAACCGCGTTGAATTGCCTTGGTGCTG CTTGAGTGTCTCCTCGCCGTATCCTACGAGTGCACACCTGTATTGCCACG CTCTGTTGAAGGGCGTCGTATTGTTTTGCACACATCATACCCAGTATGAT GCATACATTCTGAAAACCTTTCCGAAGACCCCTCTTGCAGCGGGAGGTTG ATCGCCTCGACGTACGCTCTTCTTTTCCCCCTCGCGCTGGGCCACTCACT GGTCTGGCGCCCGCTTGGTGGCCTTGGGCCGCGAAAACCTTCGTCGGACC GATGTATCTGAAACGTTAAGCCCTTACACAGACTTCCAAACCGCAGAGAG AGGCCGTCGGTGCATTCCAATACTCCTCCATTACTCGAACGGAATGCACA CAACTGTAGAACTCCTGCGCCCCGTCCTCCATCAGGCCTCCGTCTGACAG AGTAGAGCGGAGAGACGTGGTTATGTCCGCCGCGGTCGTTTTCGATCGCC CTCGCGACCCGTCGCTGTTGATCGAGGGGAGCAGATACCCCCCCCCACCC CTAGGGCCCGTGGGGGACCGGACGAAGCATACTTGTACACGAAAACTATG TCGCACGTTTGGTATGTCGGCAATAAGCAAGCACGAAAGCATCATTCTCG CCGGAGGGCACCACGGCATCATCCATGCCCCACAATTTTGACACCCCGCC CCACCCCGCCCCACTCCCATGCTCTTGGTGCATGCGTTTCTCCTCTATTG CCCCCCCCCTTTCCACACTTCGAGTACTGCTGTCTCTATGTTTCACTCAC CTCGCCCCCAACGTGGACGTGCACGTGCACCCCATCACCTGTGCGGTTCC CTATAGAATAATCTCTGTTTTTTTTATATATCGACAAAAAATGTTATTTC GCGGAGCCCCCGGCCTCGATTTTCCTCTGACATATTCAATCAATCTGCTC GTTCATCGGCTGTAGTGATGATCCAAAATTCTGCAAACTTTTTTTTGGGT GGTATATCCACCAAGCTACACACCCTAGGAGTTTCAGCTGATTCGGGAGA TTCTACGAGTGCACACATTTGGCTTAAGTGTTTTTTGGAACACTCCAGGC TAATATTTTGGCGATATTTTTGGAGGTAGACACACAATTGTTCTTTCTTA AAAATGTGAGCCTCGTGAAATACTGAGTTTTAGCATTGAGTTGGGTTGAA TTTAGGTAACTTTTGCAGGCCCATCGTCAGCGCTGTAGGACCGATCCCGA ATTCTGCAAACTTTGTTTGAGTAGCACATCTACCAAGCTACACCCGTGAA ATACTGAGTTTTAGCATTGAGTTGGGTTGAATTTAGGTAACTTTTGCAGG CCCATCGTCAGCGCTGTAGGACCGATCCCGAATTCTGCAAACTTTGTTTG AGTAGCACATCTACCAAGCTACACCCTCCTCGAGTTTCAGCCGGTTGAGC CAATTCTACGAGTGCACACATGTGGCTTGTTTTTACCTCCCGAGACCTAA AAACGAGATTTGGAGACACAGAAAACCTGAGAAAAACGGCTTTCAGATGT GATGACACAGTATTTTTGCAGTTTGAGGGATTGGCGAGCTTTACCATGGC AAAATAAGTACTGGGAGAGATATAGCATAACCCTCTTGAGGTCTCCTATT GATTTCACACCAAGCAGCGGCCTGCCAGCGGAGTATCAGTGGTGATAAAC GTCATGATCCCAATTGGCATCGGCAGCACAAAGTTGGATCAAATTTTTAG GGGCTCAGAATTTCGTAGTGGGTTCGCATGGTACCCGTCACCACCTTTTG TCGGCATAAAAAAAAACAAAAAGTGTCAAAGCCGCACATGTGCCATCGCC CCCCCATCGTGTGTGTGTGTGTATGTGGGTGTGTGATGTTGGTTGCCACC CAAAGGCACGGTGGGAGGGCTTGTGGAGTGCATCGCGGCGTATCCTTTGG ACACGGTCAAGACCAGGATGCAAACGGCACAGGTGGGGTCGTCCGGCGGT GCCCTTCGATGTTTCACCAGCGCGGTGCGGGACGACGGAGCGCTCTCCCT TTACCGGTGTGTGTGTGACAGAGAGGGGGGGGGGGAGGGGGGGGAGAGCC CGCTTATGCGTCCATTACGTTTGTGTATCGAAAAGGTGTAGACTGGCGTC CATAATAGATGGGAGACAGCACAACACAACAACACATAACACAACACAAC ACAACAACACATAACACAACACAACACAACAACACATACCATAGTGCATG TCGTGAGTCAAATGACACAAACGTCAAACCCGTGTAGACAACCTCTCAGG CGTATACCTTTTTGGGGCCGGGGGGTAAGGTCTCCCCGCAAAAGCGAGAG GTGGCATACCATATGAGGTGCCTGGTACGCAAAAGGAGGAGAGGTGTTTG TTTGCTATCGGGCGTGGCCGGCCGGCCGTCTGAATGCTACTTCGTATGAT GGTGCCAACAGATTTGGAGAAAAAAAGTGAGTGAATGAGTGAACGGCATG CTGCTGGTGTTTTTCCGCCGACAACGTGACCCGGCGATGGTGTGGTTTGA TAAGCGTGTCCACAAGCACGACTGCGTGCTTTGTGAATGTATGATACGTT TTATGTATGTGTTGTCCACGTCGGCGCGGTGACCTCGGTCGTGTCCCACC AATACACATTTTTGTACACTGCTGCTGTTGAGAGGTTGTTTAGTAAACGT TTTGAGAGGGGCAAGAGCGACCCGAACCTCAAAGCCCCCCCCCCCCCGCT TGATCCGACTTCTATTTATCTATCCATCTATCCATATTGTTGTATCCTCT ATCTCTTTGTGTTCACACGTTTTTTTTTCCCTCCTCGTCGATTCGAAATT GTTTTGTGAACGTGTTTCTCACGTCTGTATCGGATGCTGGTGATGATGGT GATAATGCTGGTGACGGCGATGACGGTGCTGCTGCTTCTGCTGTTGATGA TGATGATGATGATGGTGATGGAAAATGGTGGTGGTGGTAATGGTGGTGGT GCTGATGACGGCGCTGCTGGTGGTGATGATGACGACGATGGCGGCGACGA CGACGGCGATGATGTTGATGATGCTGGTGATGCTGGTGTCGATGCTGGTG TCGATGCCGATGATGATGATGATGATGGCGGTGATGATGGTGCCGACGGC GATGCTGTTGATGATCGTGGTGGTGCTGGTGTCGATACCGATCCGATGAT GATGATGATGATAATGGTGGTGGTGGTTGGGCTAATGATGGTGATGATGA CGGTGATGCTGGCGGCGGGAATGGCAACACTTGTGAACCATAGAGGCGTG TCTTCCCGGCTTGTGGCGAGCATGATCGCGGCCTCGGTCATGTTCGGCGC CAACGGGACCTTAAGAGAGGTCTTTGCTGCGGACTCGCGGCAGGTGATAT CATACACACCTCTACATATGTAAAGAAATTCTGTTATGAAAACTGCGGCA GGTGATATATGACATACACCTGTATACTCACACATGTTCATGACTGGTAT GGTTGAAAAAACTGTGGCTATAAGGTTTTCAAGATTGTAAATAAAGAGCA CTGCTGTTGCTGAAAAGTTTGAAGTTTTTCTCCGACGTAGCGGGGGGGGG TGTCAGGTTTTGCGAAAAGTCGCTTAGTTCTTGTTGCTTTTATTTTTTAT GCCTACAGAGCTCCTTGGCAGAAAAAAGCACTTACCGTGTGGTAACAACA CGCAACGTGAGCGACGCTTGAACCCTGCATATCATAGCAGGAACTAACAC ATGCTTGAAACACGTCCACGCGGAAGAGGAGCACAACACAATCGAAAATC GGCTTGGAAAATGCGCAAAGCCGTGTGTGTGCGTGCGTGTTGTGTGTTGT GCGTTGCGTGTAGCGCTAAACCTATTTGTAGCCTACATGTATGTTTGCAG AAACGAGTCAGTGCAGCCCCTGGGTGCGTACGTATTACACATGTTCGAGT ATAATATGTATACAGATTACAGACGCATGCGCAAGACAAGCAAAGGTACG TGGGTGCGTGTGCTTTCTTGCGCCGCGCTACTGCTGTGTGTGGCGCTTTG GCGCTCTATTACTTCGTAGCTTGTTATGGGTAGCTTAAAATGTTTTTGTG TGTGAATGCAGGCCGTATACAGATGGTGGTTTCTCCCTGCTCATGCCGCA TGGCCGCGATCGCCACTCCTTTTGAGACCGGGAGCGGCGGTGGTGCTCCG GCTTGAAAGGGATGAATGCGTGATCAACAGTGAAAGGATTATCAAGGCAA GCAACAAATGCGACCCCCCCCCCCCCCCCCCCGGCCCCCCACCTGTCTCA CACGGAATGCTGGGGTGTGGGCGTAAAGCCCCTGAGCGGGCGTTTTCTGT TGGCGGCAGCCGGGACCGGAGTCCTGGAGGCGATCGCGTACTGTCCTCTC GAGCTCGTGAAGACTCGTATGCAGGTGCTGTTGTTGTTGTTGTCGTTTTT GTCCCTGTGGCTTTTGTTGTTGTCGTCGTTGTTTTCACATGATCGGTTTT AATATATTTTAAACATGATTTTAGTCCGTGTTGGTGTGTTTTTTCGTGTG TGGTTTTCGGTCGATGATGTCTTTTCTTGTATCATTTTCGTCCTTTGCCG GAAACTGCTGTCTTTCTTGCTTCTGTCTCCTCTACCCTCGTGTGTGGTGT GCAGTTTCGCCGTGCGTGTGCATGTATGTTACTTTGGGGCTGCTGCTTTT TTTTTTTTTGACAATATGGATGTATGTTTCCTTCTCCTTCTTTTTGCTTG GTGCTTGTTCTTTCTGATGGTCTTCGCTTCCTCTGTTTGCTTCCGAGCTG AGCGCGTTATTTTTTTTTGTTCGTGCCTGGCGTGCAGTGTGTGTGTGTTT GGCGACGTGGGCTATCACATCATACCAGACACCGACTTTTGGCTACATGG CCTCATTAATGGCGAGACAATAACCACGGATAGAACGCCAGAGAGAGTCA GAGAGGGAAGAGAGATGGAGAAAGAGAGAGAGAGAAGGGTGCCCGCAGTT TGCTGACTGACCAATCGAGAAACAAGCGAGTGCCTCTCTTCTCTCTCCAG TACTAAACCAACTTAGTCTGATCACGATCAGCACCGCTAGCTGCTGTATT TCGAGCCCCGTGGTGTCTTATTTCGTCTCTACGATATAGGTGCTGAGAGG TTCTCCGACGGGCGTGACGGTGTGGTCCACGGGTCTCCAGATCTACCGTC AGCACGGGCTGTTCAAGGTACTCGGAGAAGTTTTTTTCCAGCGAGAAGCA TCTGGTGGCATGGCACAGCAGTCAGTTGAGCGTTTTAGCGTTTTCCGTTC CTCCCGTGGCACATGCCATGCACGCCACACCGCACCACACCACACCAACG CTCTGGTAGACCCCCGTGCTAGTACTTCAATACACGCACTCCGGACGCGC GGGCCTGACCCCACCCGTTCTCCGTGCAGGGCGGGAAGAGGAGATAGATG GGTGGAAACCGAAGAAAGGTGTAAAACTGAACTGCTAACTACCAAGAGTG CAGGATGCGCAGACGTATTTCTTTAACTTGCAATTTACAGATGGAGGTCG GGAAGAGGAGGTAGGTTCGAAGGTGAAAGGTTGAAAACGGCATGTACGAA CTACCAAGACTGCTGTGTGTGAGTGTTCATCCCATCTATTCTGGGCAACA GTCTACACCTTTCGGTGTGAAGTGGGTGCACCAGCCGGGGTCAAACAGGA GTAGGGTCACACACGAGCTTTTTCGTTTTTCATTCGTTTTTTATTGCACG CACCTTTCCTCCTGCGGTACTTGCCTTTGGTTTTTAGTGCGAGTCGGGCT CGGCAATCCCCTCCCTTTGTTTACTCACGAATGAATCGCTTTCCACAGCA GCAGTAAAGTTGCAAGGAAAAACGCTCCCAGAGAGGATCGAACCTGTAAC CTTACCAACAGTAGGTTGACGAGGCCAGAAGACCACCGGGGCGACCGGCG GACTGCACCATCATGTAAACTATCCTATGTCGAGAGTTGGAACTTGCACG TTGTTCGAATACTCGTATCGTATGATGTACAGTACGAAGTATGATATGAT ATTTCTGCTGTTGTGGCTTTCTTTCTTCCCAGGCCGCCACAGCATTTTTA CATTTTACATGCAGCAGTACTTGCAGTCAGTGGAGGAGGGGGGCCACATT GCGGACCTTCTGTTTCATCACTTACTTGCGAGTTGCGGACCTTTTTATTA CATTTATTTTTTGCAAGGGGGGACCCTATTATTTTATTTTTTTTAATTTC TGCAGACTTTTCTCTCACTAGTTATTACTACACTGGACGGACCCGCGTGC CACATCCTATTCGTGGGCCGCTACAGGGTAAACGTCAAGTGTAGGAAGTA TCAGCGCCGGGAATTTTCCCGTGAGAATTTTCCCGGAAATGTCGCGAGCG AGCATTTTGGCACACCTTCACGGGGCTGTGACTCGGCTCGCCCGTAGAGT CTCGAGCCTGCGACAGGAGCGTCGGGCCGGAAAAATGTTTGCTCGTCCGG GGCGTGAAAAAAAAAAAAAAATGTTTGCAGTGGCTGCCTGAAAAAGCGTC ATAACGTCTCGATTCCAAGCGGGTTGCGAGTCTCCCCGCTGCTCTCTCAG CGCTCTAAAATCATTCGCTCATTGTCTGGAAAATAAAAGATGTAGCAAGA CGAAGGTTCGTGACGTGTATATCAGACGTTTCTCTTGCTTTTGCTTTTTG TTTTCCCAACCCTCTCCCTCCCCCCCCCCGCCTCCGCCTCCGGCTCCGCT CAGGGGTGTTACAGAGGGTTTTCGTCCACGCTTCTCAAGGAGGGGCTCGG AAACACGGTCTATTTCGGGTCGTACGAGCTCTGCAAGCAGGTGTGTGTGC GAAACGAGTGAAGCTCTCGTATCGGTACAAATCACAAGAGAGTATAGTTC TACGATCATGCTTCAAGGATAGTCGTGTTGTCCCAGTATACGATACCTGG TTTCACAAATCTAAAACCTCGTGTTTCTGCAAATCTTGTGTGTTTCTGCG TACAACCCGACACTCCTCGTTCCCACCAACCCCCTCCCCCCCCCCCCCCC CCATGTCCCCGTCACCACAGCTGGCATATTCCAGCATTGCTGCTGAAACA TCAACACCGTTCGTGTAGGTGACCTGTGATACCACGCACCCTGGTCTGAT TTCGAACGCCTGATCACTTGTACTCCGCAATAAGACTCGAGAAGGTGCCG ACAGATGTGTGGCGTACGAAACGTCTCGTTTGAGAGCTTTTTGAAAACCA TTTTTGTTCGTTATTGGCTATTGGCTCATAACCTCTTTGGTCACGGAGTA GTACTCGACCTGGAAAAATCGCTCCAGGGGTGCGGTATCTTGTGTCATCC ACGGTACGACTGGACATTCCTCGCCCCCGCCCCCCCCACCCCCCAACCTC CACCTCCTCTCCGATGACGACGTTCATCGTTCGACCCGCTTCCTTCATTC ATTGCCACAGCAGCTTCTCACACACGTACAGCCGCGAAACAAACAGCAAT ATTCACACACATTGACACATACGCACACGCACACGCGCACGCACACACGG AACACACACGCACACACATGTGCTTATTCTCGGGCAGGCGTTTGCTGGCG GTGGAAGTGCGGCGGGTGTGCAAGGAGCGGAAGGCGATCAGCAGCCTGGA GTGTGGCCCATCGTCGGAGCGGGGGGATGCGCGGGGGTTCTCTACACCGC CGCTACTCACCCGATCGACACCGTCAAGTCGCTGGTGCAGACCGATTCGA TAGACGCCCCGAGATACCGAGGCTTCTTGGACGGCTGGCAACAAGTCTTG GCCCAGCGCGGCGGCGGCGGCGGCGGCGGCGGGGGGGGGGGTAGCGGTGG TGGGGTGAAGGGGTTCTTAGGGTTATACCGAGGGCTATCGCCGGCGATAG CGCGGGCTTTCGTCGGAAACTCAATCTTGTTTTTGACGTACGAGAGCGTG CTAGACGTGCTCGGACGATGACGACAGCGGAATCGGTGCGGCGAAAGCGA TGTTACGTGCACGTGAGGATGTGTTGGGATATAGAGTCTACAGCAGCAGT TTATCCGCTGTTCAGTTGGTATCAGAGTGCGAAACACCCTCTTTGCTACA CAGAAATGGTATGTCACACACATTGTCCGTTGCCACCCGCCAGGTGAAGA ACCAGTGTGTACGCCCCCCCCTCCCTCCCCACGAAACCCTTGAGAAAGAC CGGGACTGGAATATAGCGCATATTTTTTTCTCCGCCGGGGCGGATGTCGG CGGAGGGGGGGGGTGTCCCCCCCCCCTGAGGATTTGATACAGCAGGCAGC AGTCGCTACCGTAAGGTACGTTTCTCACCCCGAGGGGGCCGTTCTGTTCG ATCCGAGGAACCGTCCTTTGTTCTGGGTCCGAAAGCGCGGGACAAAGGCG ATACAGCAGTAGTCCCTTTTCCGGCGTAAAAGCGTGTTTTTTTGCCAACA ATGGAAGCGTTCAGCGGTACATGATATGAATTGCACCACAAAATTTCGTC TCTGTGGGAAAACCGCCAGAAGGGGCGGAGGGGATTAACAATACCGTGAG GCTCTGTCTGCGTGCTTACTCTGTGCATCGACTGTTTTGTGTTGCTCTTG AGTTGGGTGCTACCATGCGATAAGAAGTACCGGTAACATGTTGTTATGAG TGAGGTGGTGTGAGAGGGCAGCCGAGGGGAAAGCACCTCTTGTTGCATGT GCTCTTGCGCGAGAGACGTTTTCGACAGCAGCAGCAGCAGCAGCAGCATC AGCTGGGGGGTCCCGTTCGCCTCGTTCTCGCACCACCTGGGATTGATCGC GAAAAAACCCTCGTCCAGGTGTGGCAACGCTACCTACATGATAGGTTGCA CGACTTCACAAAGAGTGCAGCCAGTAGAAAACTGAATACCTGGTACAGTA CAAGCAATTCCGCGGAGAAAGAAGGGGGCTTGGTTGATTTCAGCTCGCGT TGCCACAGCGACGGGCGGCGTGATCTTGTATGATAGCGCGGTAAGAGTGG CCTTTTATTGCCGTGGTCGTAATGGACGTTTTTGCTGTTCTCGTGTGTAT ACGATTAGTTGCCCGGGAGAAGAGCCCGGGCCTAGCGTGAATCCCGTCCC CTTTTTTTTGTATTCCCACTCGAGATGGGGAGTGCCGGTGGGGTCGGGAG TAGGGAAGCAGAAAGAAAAGAAGCGGTTTGCTGTTGTTCTCTTATTCATA ACATACCTGGCGGGGGGCGGGGAGGGGGACTCGATGTCTGAATCGCGTGT GAGTGAGTTGATGAGGTGCCTGCCTGACCCGGCCCTCCGTTTCTGTTTTA TTTCATGAAAAAAGTAGAAACACATCGCCGCCTGCCCCGGGGGTGAAGGC TGAATACTAGCCGTATCCCCCGGCTCGCCTTTTCGTCTTTCGATTGTCTT GGCTCTTGAGTTTGTCGTATTCTACTCCACGGCTTCCTCTGATTTATTTT CGCCACAGCAGTGCATGTGCGATGTTTGAGAAATCGTGCTGTCTGTACAA GTACCTCATGCCATTATGTGTGTACGTATACGTCATAACTACGTGTGTTG AGGGATTTTTTAGGGTTTCTTGGCTAAGAGGCGTGTATTGTCTTCCCCCG GGTGCTGCTGTTGACACACAAGTTTTACCAAGGCTGACTGACTTTTTATG CTGCGCTCGTCTTGGCGCATCTTCTTCGTTCGCTCCGGTTTCATGCCCCT ACGCGGTGGTGTTGGTGATGCCCTCCTACAAGTACAGTACTTTTGATTTT TCCCATGCCCTCAATGGTGTGTGTTGGCCCTGCCATCCTCGTGCAGCAGT GCAAACGAATCTTGTCTCCCTCTCTCGTTTAATTTGCTCTGTGTGACGGT TGCGATGTGAGAAAACGGTGGCAATTTGTCTCGCGGATTTGCAGAGGCTC ACCGACTACGGCTACAATACGAGTAGGGCCCCGATAACCAAAAATGTACT TCGTATATCCGTG
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig182:208405..219417-

>mRNA_P-littoralis_Contig182.58.2 ID=mRNA_P-littoralis_Contig182.58.2|Name=mRNA_P-littoralis_Contig182.58.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1011bp|location=Sequence derived from alignment at P-littoralis_Contig182:208405..219417- (Pylaiella littoralis U1_48)
ATGAGTGAACCACACCTGCCTCCGGAAGATGTTGGAGCCAGTGCTCGCCG
CAGGGGACGGCAAGAAACAGAGACGGGGGCCTTCTTTGTGCGCATCGGCA
AGCTGTTCGCTGCAGGCACGGTGGGAGGGCTTGTGGAGTGCATCGCGGCG
TATCCTTTGGACACGGTCAAGACCAGGATGCAAACGGCACAGGTGGGGTC
GTCCGGCGGTGCCCTTCGATGTTTCACCAGCGCGGTGCGGGACGACGGAG
CGCTCTCCCTTTACCGAGGCGTGTCTTCCCGGCTTGTGGCGAGCATGATC
GCGGCCTCGGTCATGTTCGGCGCCAACGGGACCTTAAGAGAGGTCTTTGC
TGCGGACTCGCGGCAGCCCCTGAGCGGGCGTTTTCTGTTGGCGGCAGCCG
GGACCGGAGTCCTGGAGGCGATCGCGTACTGTCCTCTCGAGCTCGTGAAG
ACTCGTATGCAGGTGCTGAGAGGTTCTCCGACGGGCGTGACGGTGTGGTC
CACGGGTCTCCAGATCTACCGTCAGCACGGGCTGTTCAAGGGGTGTTACA
GAGGGTTTTCGTCCACGCTTCTCAAGGAGGGGCTCGGAAACACGGTCTAT
TTCGGGTCGTACGAGCTCTGCAAGCAGGCGTTTGCTGGCGGTGGAAGTGC
GGCGGGTGTGCAAGGAGCGGAAGGCGATCAGCAGCCTGGAGTGTGGCCCA
TCGTCGGAGCGGGGGGATGCGCGGGGGTTCTCTACACCGCCGCTACTCAC
CCGATCGACACCGTCAAGTCGCTGGTGCAGACCGATTCGATAGACGCCCC
GAGATACCGAGGCTTCTTGGACGGCTGGCAACAAGTCTTGGCCCAGCGCG
GCGGCGGCGGCGGCGGCGGCGGGGGGGGGGGTAGCGGTGGTGGGGTGAAG
GGGTTCTTAGGGTTATACCGAGGGCTATCGCCGGCGATAGCGCGGGCTTT
CGTCGGAAACTCAATCTTGTTTTTGACGTACGAGAGCGTGCTAGACGTGC
TCGGACGATGA
back to top