mRNA_P-littoralis_Contig182.45.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig182.45.2
Unique NamemRNA_P-littoralis_Contig182.45.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig182.45.2 vs. uniprot
Match: A0A6H5JB34_9PHAE (SufBD_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB34_9PHAE)

HSP 1 Score: 867 bits (2241), Expect = 1.410e-303
Identity = 475/589 (80.65%), Postives = 513/589 (87.10%), Query Frame = 3
Query:    9 REQQKNGRGGNESRRLSTMLAVAAGLLSVAPT-NSFLSAPLSSAVSGAAGSXXXXXXXXXRTSTGESRLTMQASAASRRDGSRGNGAAGGAGVQRLCATGVATEDNQGA-VGSLLETQRKGVSNNDMQPFVAVPRRDPRVWFDAIRDGALPRPDTLVDLSKAGEVELAELALPNRKQEPYRYTDLESLYRTDFTSGSESGGAAAAATAEAVKPYLLEACQGQQMVFVNGLFSEELSDVSALGGVEGLVVGHVGEMEGATLEQAKEMLSYLPEKDADFRTTQGSLPFASLNQACFADAGVIMVADGVTVEKPIQVVFFSEGAEGPTVSHPRLVVKAGADSKLTFTQNYLSQGGVCLANGFTRVLVGDRATVTHDYAEEMSASDRLVDTVSVDQHVNSTYSVNQVLSGAFDARANFQIDLLESGSHCNVFTAALTTKNQRQDVHSTIRHKAKGTTCLQEQRNVVSDTADCVFKGRIVIDQVAQKTDANQLCRTLLVSDKARVTVMPSMEIIANDVKCTHGATICDLEEEELFYLMSRGISKIQAKTLVIKSFADIVVKRFIDPDLRERLTAKLLEAAPREDRATRGTYQSI 1769
            R+ Q++  GG++S R+ST+LAVAAGLLS+APT +SFLSAP+     GA GS         R STGE+R       A R+ G            + L ATGV TEDNQGA VGSLLETQ+KGVSNN+M PFV VPRRDPRVWFDAIR+GA+PRPD+LV+LSKAGE ELAELALP RKQEPYRYTDLESLYRTDF S + +   AAA TA A+KP+LLEA QGQQMVFVNG+FS+ELSDVSALGGVEGLV GH+G +EG  L+QAKEMLSYLPEKDADFRTTQGSL FASLNQACFADAGVI+VADGVTVEKPIQV+FFSEG E PTVSHPRLVVKAGADS +T TQ+YLS+GGVCLANGFTRVLVGDRATVTHDYAEEMSASDRLVD VSVDQ  NSTYSVNQVLSGAFDARAN QIDLLE+GSHCNVFTAALTT NQRQDVHSTIRHKA+GTTCLQEQRNVVSDTADCVFKGRIVIDQVAQKTDANQLCRTLLVSDKARVTVMPSMEIIANDVKCTHGATICDLE+EELFYLMSRGISKIQAKTLVIKSFADIVVKRFIDP+LRERLT KLL AAPR DRAT+GTYQSI
Sbjct:  165 RKAQRSRNGGSKSPRVSTVLAVAAGLLSLAPTADSFLSAPMR----GAGGSGAAEGLR--RRSTGEARSAR----AGRQVG------------RVLVATGVVTEDNQGAAVGSLLETQQKGVSNNEMNPFVRVPRRDPRVWFDAIREGAVPRPDSLVELSKAGEAELAELALPTRKQEPYRYTDLESLYRTDFKSAALT--TAAAETAAAIKPHLLEASQGQQMVFVNGVFSDELSDVSALGGVEGLVAGHIGAIEGTPLDQAKEMLSYLPEKDADFRTTQGSLAFASLNQACFADAGVIIVADGVTVEKPIQVIFFSEGEEVPTVSHPRLVVKAGADSHMTLTQSYLSRGGVCLANGFTRVLVGDRATVTHDYAEEMSASDRLVDIVSVDQTTNSTYSVNQVLSGAFDARANLQIDLLETGSHCNVFTAALTTNNQRQDVHSTIRHKAEGTTCLQEQRNVVSDTADCVFKGRIVIDQVAQKTDANQLCRTLLVSDKARVTVMPSMEIIANDVKCTHGATICDLEDEELFYLMSRGISKIQAKTLVIKSFADIVVKRFIDPNLRERLTVKLLAAAPRGDRATKGTYQSI 729          
BLAST of mRNA_P-littoralis_Contig182.45.2 vs. uniprot
Match: D8LLY7_ECTSI (FeS assembly protein SufD n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLY7_ECTSI)

HSP 1 Score: 807 bits (2084), Expect = 4.390e-283
Identity = 438/541 (80.96%), Postives = 474/541 (87.62%), Query Frame = 3
Query:    9 REQQKNGRGGNESRRLSTMLAVAAGLLSVAPT-NSFLSAPLSSAVSGAAGSXXXXXXXXXRTSTGESRLTMQASAASRRDGSRGNGAAGGAGVQRLCATGVATEDNQGAV-GSLLETQRKGVSNNDMQPFVAVPRRDPRVWFDAIRDGALPRPDTLVDLSKAGEVELAELALPNRKQEPYRYTDLESLYRTDFTSGSESGGAAAAATAEAVKPYLLEACQGQQMVFVNGLFSEELSDVSALGGVEGLVVGHVGEMEGATLEQAKEMLSYLPEKDADFRTTQGSLPFASLNQACFADAGVIMVADGVTVEKPIQVVFFSEGAEGPTVSHPRLVVKAGADSKLTFTQNYLSQGGVCLANGFTRVLVGDRATVTHDYAEEMSASDRLVDTVSVDQHVNSTYSVNQVLSGAFDARANFQIDLLESGSHCNVFTAALTTKNQRQDVHSTIRHKAKGTTCLQEQRNVVSDTADCVFKGRIVIDQVAQKTDANQLCRTLLVSDKARVTVMPSMEIIANDVKCTHGATICDLEEEELFYLMSRGISKIQ 1625
            R  Q++  GG+ESRR+ST+LAVAAGLLS+APT +SFLSAP+     GA GS         R STGE+R            G +G+G         L ATGVATEDNQGAV GSLLETQ+KGVSNN+M+PFV VPRRDPR+WFDAIR+GA+PRPD+LV+LSKAGE ELAELALP RKQEPYRYTDLESLYRTDFTS + +    AA TA A+KP+LLEA QGQQMVFVNG+FS+ELSDVSALGGVEGLV GH+G +EGA L+QAKEMLSYLPEKDADFRTTQGSL FASLNQACFADAGVIMVADGVTVEKPIQV+FFSEG EGPTVSHPRLVVKAGADS +T TQ+YLS+GGVCLANGFTRVLVGDRATVTHDYAEEMSASDRLVDTVSVDQ  NSTYSVNQVLSGAFDARANFQIDLLE+GSHCN+FTAALTT NQRQDVHSTIRHKA+GTTCLQEQRNVVSDTADCVFKGRIVIDQVAQKTDANQLCRTLLVSDKARVTVMPSMEIIANDVKCTHGATICDLE+EELFYLMSRGISKIQ
Sbjct:    3 RTAQRSRNGGSESRRVSTLLAVAAGLLSLAPTADSFLSAPMK----GAGGSGAAQGLR--RRSTGEARSAQA--------GRQGDGV--------LSATGVATEDNQGAVAGSLLETQQKGVSNNEMKPFVRVPRRDPRMWFDAIREGAVPRPDSLVELSKAGEAELAELALPTRKQEPYRYTDLESLYRTDFTSAAPT--TTAAETAAAIKPHLLEASQGQQMVFVNGVFSDELSDVSALGGVEGLVAGHIGAIEGAPLDQAKEMLSYLPEKDADFRTTQGSLAFASLNQACFADAGVIMVADGVTVEKPIQVIFFSEGEEGPTVSHPRLVVKAGADSHVTLTQSYLSRGGVCLANGFTRVLVGDRATVTHDYAEEMSASDRLVDTVSVDQTTNSTYSVNQVLSGAFDARANFQIDLLETGSHCNIFTAALTTNNQRQDVHSTIRHKAEGTTCLQEQRNVVSDTADCVFKGRIVIDQVAQKTDANQLCRTLLVSDKARVTVMPSMEIIANDVKCTHGATICDLEDEELFYLMSRGISKIQ 519          
BLAST of mRNA_P-littoralis_Contig182.45.2 vs. uniprot
Match: A0A836CQZ7_9STRA (SufBD_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQZ7_9STRA)

HSP 1 Score: 375 bits (963), Expect = 3.160e-116
Identity = 215/469 (45.84%), Postives = 299/469 (63.75%), Query Frame = 3
Query:  393 VAVPRRDPRVWFDAIRDGALPRPDTLVDLSKAGEVELAELALPNRKQEPYRYTDLESLYRTDFTSGSESGGAAAAATAEAVKPYLLEACQGQQMVFVNGLFSEELSDVSALGGVEGLVVGHVGEMEGATLEQAKEM--LSYLPEKDADFRTTQGSLPFASLNQACFADAGVIMVADGVTVEKPIQVVFFS------EGAEGPTVSHPRLVVKAGADSKLTFTQNYLSQGGVCLANGFTRVLVGDRATVTHDYAEEMSASDRLVDTVSVDQHVNSTYSVNQVLSGAFDARANFQIDLLESGSHCNVFTAALTTKNQRQDVHSTIRHKAKGTTCLQEQRNVVSDTADCVFKGRIVIDQVAQKTDANQLCRTLLVSDKARVTVMPSMEIIANDVKCTHGATICDLEEEELFYLMSRGISKIQAKTLVIKSFADIVVKRFIDPDLRERLTAKLLEAAPREDRAT--RGTYQSI 1769
            +A  R DPR WF A++  A   P    +L+ AG   L E+ LP+RKQEPYRYTDLE+++R  + +      A    + E  + YL EA +GQQ+VFVNG F+ +LSD SA+   EG+   +VG   GA   QA  M  L +LPE  A+  T QGSLPFA+LNQACFADA  +++   VTVE+PIQV+F +      EG EG  + HPRL + AG  S     Q+Y+ +G    AN  TR +VG  A ++H +++E SAS + +DTV  D    + YS++ V  G   AR+N Q++L  + +HCN+  AAL + +Q  D H+ + H A  TT  Q+ RN+V+D++DC+FKGR+ +D +AQ TDA+QLCRTL++SD+ARVT MPS+EI A+DVKC HGAT+ DL+EE LFYL  RGI+  +A+ LVIK FA  ++K   D +L+ R+  KL+   P+  RA    G + SI
Sbjct:    7 LAPKRADPRTWFGALQQQAAT-PAPFRELASAGAATLDEVDLPHRKQEPYRYTDLEAIFRHSYDAT-----AGLPVSQEFAQKYLSEASKGQQLVFVNGRFNAQLSDTSAV--PEGV---YVGSALGAGEHQAAVMGVLDHLPEVGANKNTCQGSLPFAALNQACFADAAAVVIPPNVTVEQPIQVLFVTHAPKENEGGEGGAICHPRLAIVAGEGSSALVMQSYVGEGDY-FANCVTRSVVGKGAKLSHTHSQEQSASAQHLDTVVADLAEEAVYSLSMVACGGLFARSNIQVELNGAKAHCNLNAAALCSGDQSVDFHTQMGHAAPDTTMEQQHRNIVADSSDCIFKGRVRVDGIAQGTDAHQLCRTLMLSDRARVTAMPSLEITADDVKCAHGATVADLDEESLFYLGCRGINAAEARALVIKGFAFDMIKALPDTNLQARVLEKLISMTPKSSRAVTAEGAFSSI 463          
BLAST of mRNA_P-littoralis_Contig182.45.2 vs. uniprot
Match: A0A7S2MCQ0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MCQ0_9STRA)

HSP 1 Score: 290 bits (741), Expect = 1.790e-83
Identity = 181/465 (38.92%), Postives = 260/465 (55.91%), Query Frame = 3
Query:  423 WFDAI-RDGAL-PRPDTLVDLSKAGEVELAELALPNRKQEPYRYTDLESLYRTDFTSGSESGGAAAAATAEAVKPYLLEACQGQQMVFVNGLFSEELSDVSALGGVEGLVVGHVGEMEGATLEQAKEMLSYLPEKDA--DFRTTQGSLPFASLNQACFADAGVIMVADGVTVEKPIQVVFFSEGAEGPTVSHPRLVVKAGADSKLTFTQNY--LSQGGVCLANGFTRVLVGDRATVTHDYAEEMSASDRLVDTVSVDQHVNSTYSVNQVLSGAFDARANFQIDLLESGSHCNVFTAALTTKN-----QRQDVHSTIRHKAKGTTCLQEQRNVVSDTADCVFKGRIVIDQVAQKTDANQLCRTLLVSDKARVTVMPSMEIIANDVKCTHGATICDLEEEELFYLMSRGISKIQAKTLVIKSFADIVVKRFID--PDLRERLTAKLLEAAPRED---RATRGTYQSI 1769
            WF+ + R  AL P  D L +    G+  L  +  P RK EP+RYTDL S++ TD+      G      + E ++PYL E     QMVF++G+F E LSD+SALG    L +G +  +    L +  + L  +PE D   D RT QGS  F SLNQAC +D   I V +GV VE+PIQV+F S     P++SH +LVV   + +  +  Q+Y  +  G     N  T V +G  AT+ H YA+E     + ++T++V    +S Y +  V SG+  +R NF  D   +G +  V T ++         Q  D HS+I H A  +   Q+ RN+VS   +C+FKGRI + QVAQ TD+ QLCRTLL++D A+V +MPS+EI+A+ VKC HGAT+ DL  EELFYL+SRGI +  AK ++ + F   V++  +D  P    RL   + +  P +D   R+    Y S+
Sbjct:   66 WFERVSRKSALSPVVDLLSNTRLKGKDALTRVETPRRKLEPWRYTDLTSMFGTDYCRPQGLGDV----SRETIEPYL-EKSASVQMVFMDGVFCESLSDMSALGS---LSIGGLSSLTPDVLPKVLQALEKVPEMDPTPDRRTCQGSAAFGSLNQACLSDCAYIFVPEGVEVERPIQVLFMSSATLAPSISHTQLVVVVESGASASLLQSYAGVGDGDTYFTNALTTVELGAGATLKHAYAQEAKLGAQHIETMTVSTDGDSIYELTAVCSGSRQSRFNF--DSYMNGENALVDTVSVLLSGGVGSRQVNDFHSSITHNAVNSFSKQKHRNMVSTKGECIFKGRIAVPQVAQGTDSEQLCRTLLLTDDAKVVMMPSLEIVADQVKCEHGATVSDLSGEELFYLLSRGIDRTAAKGILARGFLTEVIRDRLDAYPQTSSRLDQSIKQIVPEDDGLERSVEYEYSSV 520          
BLAST of mRNA_P-littoralis_Contig182.45.2 vs. uniprot
Match: A0A7S2W6I7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W6I7_9STRA)

HSP 1 Score: 278 bits (712), Expect = 4.880e-79
Identity = 163/460 (35.43%), Postives = 261/460 (56.74%), Query Frame = 3
Query:  423 WFDAIRDGALPR---PDTLVDLSKAGEVELAELALPNRKQEPYRYTDLESLYRTDFTSGSESGGAAAAATAEAVKPYLLEACQGQQMVFVNGLFSEELSDVSALGGVEGLVVGHVGEMEGATLEQAKEMLSYLPE-KDADFRTTQGSLPFASLNQACFADAGVIMVADGVTVEKPIQVVFFSEGAEG--PTVSHPRLVVKAGADSKLTFTQNYLSQGG-VCLANGFTRVLVGDRATVTHDYAEEMSASDRLVDTVSVDQHVNSTYSVNQVLSGAFDARANFQIDLLESGSHCNVFTAALTTKNQRQDVHSTIRHKAKGTTCLQEQRNVVSDTADCVFKGRIVIDQVAQKTDANQLCRTLLVSDKARVTVMPSMEIIANDVKCTHGATICDLEEEELFYLMSRGISKIQAKTLVIKSFADIVVKRFIDPD----LRERLTAKLLEAAPREDRATRGTYQSI 1769
            WF+A  + A+P    P  +V+    G+  L +  +P RKQE +R+ ++++++  + ++ ++S       +++A+ PY+     G   VFV+G+F  ELSD+ ++   + +V G V  +     E    ML  LPE K +D RT QG+  FA+LNQACF D+  I V DGV VE+P++V+F S  +    PT S+PR ++  G D++L+  Q+Y + GG     NG T V + + A + H Y ++++A     D +  +      +     L G   +R N  + L   G+   V +  +T   Q  D HS+I H  + TT  Q+QRN++   +D VF+GRI +DQ AQ TD+ QLCR+LL++D+A++TVMPS+EIIA+ V CTHGAT+ DL  +ELFYL SRG++   A+ L+ K F      RF   D    L +++   + E   + +++   TY S+
Sbjct:   98 WFEAALEAAVPDTGLPPQVVEKRSEGKTLLPDHNVPQRKQEAWRFNNIQTMFAIEPSTPADSSSV----SSDALAPYMYAETAGATAVFVDGVFRPELSDLGSV--PDNVVFGAVSSVGDRLSETHLGMLDELPEVKGSDHRTNQGAAAFAALNQACFVDSACIYVPDGVQVEQPVEVLFVSTASTSARPT-SYPRAIIAMGKDAELSLVQSYATVGGDKHFTNGLTVVAIDENAKLDHFYVQDVAAGATHYDALIANVSSGGEHKFCTTLLGGEQSRLNCDVHLNGDGARAEVVSVLVTDNRQMADFHSSISHHVENTTSFQQQRNILGGRSDVVFRGRIKVDQEAQNTDSEQLCRSLLLTDRAKITVMPSLEIIADQVVCTHGATVADLSADELFYLQSRGLTPELARALLTKGFVREFADRFTCKDALGQLDDKIEKLVKEVRNKANKSKYNTYTSV 550          
BLAST of mRNA_P-littoralis_Contig182.45.2 vs. uniprot
Match: A0A7S4DBS2_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DBS2_HETAK)

HSP 1 Score: 260 bits (665), Expect = 2.790e-74
Identity = 163/390 (41.79%), Postives = 225/390 (57.69%), Query Frame = 3
Query:  657 CQGQQMVFVNGLFSEELSDVSALGGVEGLVVGHVGEMEGATLEQAKEMLSYLPEKDADF--------RTTQGSLPFASLNQACFADAGVIMVADGVTV-EKPIQVVFFS-------EGAEGPTVSHPRLVVKAGADSKLTFTQNYLSQGGVCLANGFTRVLVGDRATVTHDYAEEMSASD--RLVDTVSVDQHVNSTYSVNQVLSGAFDARANFQIDLLESGSHCNVFTAALTTKNQRQDVHSTIRHKAKGTTCLQEQRNVVSDTADCVFKGRIVIDQVAQKTDANQLCRTLLVSDKARVTVMPSMEIIANDVKCTHGATICDLEEEELFYLMSRGISKIQAKTLVIKSFADIVVKRFIDPDLRERLTAKLLEAAPREDRATRGT-YQSI 1769
            C G+++VFV+G+F   LSD++ +    G+V G V  +    L  A   LS++PE  AD         RT QGS PF +LN A   DA V++V +GV   EKP +V+F +       EGA     SH RL V AGA ++L   Q+    G   LANG  RV VG  A V H   +E  A+   R ++TV  +   +  Y  + V  G  DAR N Q++L    +HC +  AA   ++Q   +++TIRH A+ TT  Q QRNV+    D V+KGRI +++VAQ+TDA+QLC +L++SD+ARVT MPSMEIIA+ VKCTHGAT+ D+ EEELFY  +RGI +  A+ L++  FAD   +       + RLT K+    P  +  T G  YQSI
Sbjct:   10 CAGRRLVFVDGVFEAALSDLADV--PAGVVAGSVAALSAEQLATALPALSFVPELGADNARLGHENKRTCQGSAPFGALNLAALQDAAVLLVPEGVDAGEKPFEVMFIASSEEAEAEGAPARLSSH-RLAVVAGAGARLALVQHACGLGSRHLANGLARVEVGAGAAVRHALLQEHPAAPGARQLETVCAEVGEDGRYEFSTVALGGGDARLNVQVELSGERAHCGLRGAAFGGQDQNLAMYTTIRHNAEATTTEQVQRNVLGKNTDVVWKGRIRVEEVAQQTDADQLCASLMLSDQARVTAMPSMEIIADQVKCTHGATVSDMSEEELFYFAARGIGRQMARELIVLGFADEAAEEINCEKFQARLTEKVQSILPPSESRTLGAIYQSI 396          
BLAST of mRNA_P-littoralis_Contig182.45.2 vs. uniprot
Match: A0A7S2HD05_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2HD05_9EUKA)

HSP 1 Score: 247 bits (630), Expect = 7.080e-68
Identity = 170/472 (36.02%), Postives = 242/472 (51.27%), Query Frame = 3
Query:  423 WFDAIRDGALPRPDTLVD-LSKAGEVELAELALPNRKQEPYRYTDLESLYRTDFTSGSESGGAAAAATAEAVKPYLLEACQ------GQQMVFVNGLFSEELSDVSALGGVEGLVVGHVGEMEGATLEQAKEMLSY-LPEKDADFRTTQGSLPFASLNQACFADAGVIMVADGVTVEKPIQVVFFS--------EGAEGPT------VSHPRLVVKAGADSKLTFTQNYLSQGGVCLANGFTRVLVGDRATVTHDYAEEMSASDRLVDTVSVDQHVNSTYSVNQVLSGAFDARANFQIDLLESGSHCNVFTAALTTKNQRQDVHSTIRHKAKGTTCLQEQRNVVSDTADCVFKGRIVIDQVAQKTDANQLCRTLLVSDKARVTVMPSMEIIANDVKCTHGATICDLEEEELFYLMSRGISKIQAKTLVIKSFADIVVKRFIDPDLRERLTAKLLEAAPRED-RATRGTYQSI 1769
            WF    D A   P+ L++ L     + L+ L  P RK E +R  DL SL  +   +         A TA   +  LL +C       G ++V V+G+ S ELSD+SAL    G+  G +  ++G   + A   L   LPE +AD RT  G   FA+LNQA  AD   + V  G+ VE+P+ VV  S        E  E          SHP +V+     + L+  Q Y  +GG    NG TRV +G  A + H Y +E +     VD+V VD      Y    + SG   +R N Q++L   G+H ++    L T NQ  DVHS + H +   T  QEQRN V+  A  VFKG +V+ Q +  T ANQLCRTLL+SD AR+ + P++EI  +DV+CTHGAT+ DL++E +FYL +RG+S++ A+ L+++ +A   + +      R+R   K    AP  D R  R    SI
Sbjct:   69 WFQGAVDAASGDPEPLLEELRATAAMALSGLEFPRRKDEAWRRCDLTSLRASRIVTP--------AGTANVEQ--LLASCHSVEDSVGMRLVLVDGVCSPELSDLSAL--PAGMSAGSLCSVQGDAHDGALAALRQALPEAEADHRTALGVHTFAALNQASLADVISVHVPAGMQVEQPLHVVILSTAGASSGLEDGESAAPQRTLAASHPNIVLSLAEGASLSMLQQYGGEGGT-FTNGLTRVNLGTDAKLVHSYVQEQALESVHVDSVLVDVGERGLYESQLLQSGGRISRVNIQVNLERPGAHSSLKGLTLATGNQLADVHSRVVHASGDCTSQQEQRNAVAGAARVVFKGAVVVPQGSDNTTANQLCRTLLLSDDARIDMQPTLEIDTDDVQCTHGATVSDLDDEMIFYLQARGLSRLDARALLLEGWARSALDKVPSAGARQRAAVKAATLAPDSDIRVRRERLSSI 527          
BLAST of mRNA_P-littoralis_Contig182.45.2 vs. uniprot
Match: A0A0M0J7I3_9EUKA (Assembly protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J7I3_9EUKA)

HSP 1 Score: 232 bits (591), Expect = 2.020e-62
Identity = 164/471 (34.82%), Postives = 233/471 (49.47%), Query Frame = 3
Query:  423 WF-DAIRDGALPRPDTLVDLSKAGEVELAELALPNRKQEPYRYTDLESLYRTDFTSGSESGGAAAAATAEAVKPYLLEACQ-----GQQMVFVNGLFSEELSDVSALGGVEGLVVGHVGEMEGATLEQAKEMLSY-LPEKDAD----FRTTQGSLPFASLNQACFADAGVIMVADGVTVEKPIQVVFFSEGA-----------EGPT----VSHPRLVVKAGADSKLTFTQNYLSQGGVC--LANGFTRVLVGDRATVTHDYAEEMSASDRLVDTVSVDQHVNSTYSVNQVLSGAFDARANFQIDLLESGSHCNVFTAALTTKNQRQDVHSTIRHKAKGTTCLQEQRNVVSDTADCVFKGRIVIDQVAQKTDANQLCRTLLVSDKARVTVMPSMEIIANDVKCTHGATICDLEEEELFYLMSRGISKIQAKTLVIKSFADIVVKRFIDPDLRERLTAKLLEAAPREDRATR 1751
            WF DA      P    L  L  A    L  +  P RK EP+R  DL SL  +          +AAAA         L  C      G ++V V+G+ S+ LSD+SAL   EG+ V  +    GA L+ A   L   LPE  A+      T  G   FA+LNQA  AD  VI V  GVT+E+P+ VV  S G            EG       SHP L+V     + L   Q+Y +       L NG TRV +G  AT+ H Y +E        D+V VD    ++YS   + SG   AR N  ++L    +  N+   ++  + Q  DVHS + H +   T  QEQRNVV+  +  V+KG +V+ + +  T+A QLCRTLL+SD ARV V P++EI  ++V+CTHGATI DL++E +FYL +RG+S+  A+ L++  +    +       +++R  A+  +     D+  R
Sbjct:   72 WFADAAATSPAPSSPMLAPLRAAAAAALPTIYFPGRKDEPFRRCDLSSLQASRLVPSVAKDASAAAA---------LAVCSDADSAGMRLVLVDGVCSQALSDLSAL--PEGVSVSSLNTTSGAALDGALAALQGPLPESGANTAAAMNTLLGVYGFAALNQASLADVCVINVPKGVTIERPLHVVLLSSGGVAAAPMQAPGTEGAAPVLPASHPNLLVSLAEGASLKLAQHYFACDAQAPYLCNGVTRVQLGRSATLQHSYVQEQGRMSIHFDSVLVDVGAGASYSSTMLQSGGRIARTNHLVELTGEKASSNLRALSMAAEAQLVDVHSKVVHVSGECTSQQEQRNVVAGRSRVVWKGAVVVPRGSDNTNAKQLCRTLLLSDDARVDVQPTLEIDTDEVECTHGATISDLDDEMVFYLQARGLSRPDARALLLSGWVRDALALVPSESVKQRAVARAAKVGADYDKEVR 531          
BLAST of mRNA_P-littoralis_Contig182.45.2 vs. uniprot
Match: K8YSK7_NANGC (Assembly protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YSK7_NANGC)

HSP 1 Score: 231 bits (589), Expect = 8.040e-62
Identity = 161/464 (34.70%), Postives = 233/464 (50.22%), Query Frame = 3
Query:  423 WFDAIRDGALPRPDTLVDLSKAGEVELA-ELALPNRKQEPYRYTDLESLY-RTDFTSGSESGGAAAAATAEAVKPYLLEACQGQQMVFVNGLFSEELSDVSAL---GGVEGLVVGHVGEMEGATLEQAKEMLSYLPEKDADFRTTQGSLPFASLNQACFADAGVIMVADGVTVEKPIQVVFFSE------GAEGPT---VSHPRLVVKAGADSKLTFTQNYLSQG-GVCLANGFTRVLVGDRATVTHDYAEEMSASDRLVDTVSVDQHVNSTYSVNQVLSGAFDARANFQIDLLESGSHCNVFTAALTTKNQRQDVHSTIRHKAKGTTCLQEQRNVVSDTADCVFKGRIVIDQVAQKTDANQLCRTLLVSDKARVTVMPSMEIIANDVKCTHGATICDLEEEELFYLMSRGISKIQAKTLVIKSFADIVVKRFIDPDLRERLTAKLLEAAPREDRATRGTYQSI 1769
            WF+A+     P P       +  E  LA E   P R++E +R+TDL  LY R      +    A   A    ++ + LE C+G+ +VFV+G+   ELS V+ L   G  EG   G + E      E+    + + PE         GSLPF+ LNQAC  DA  ++V +   +  P+Q +F S       GAEG     VSHPRL V A   S   F Q+Y+  G G  LAN  T V V  RA V H +A E+     + D VSV     S Y    V  G    R NFQ  L  +    +     +T + Q  D+HS I H+ KG      Q N+VS  + CVFKGR+ ++  A+   A+QL R+++++D   V  MP++E+ + DV CTHGAT+ D++E E FYL SRGIS+ +A+ +++  FA  V  +     +++RL  +L +  P    A +  Y S+
Sbjct:  109 WFNAVLADRDPHPAFGRATEEGVERFLAGETRAPTRREEAWRFTDLSRLYGRRPSKPPAVLQPAQVTALKAKIEEHTLEVCEGRVVVFVDGVHRPELSHVARLKEEGPKEGWRAGSIFEFSKEEQEELFREVEWAPEVGLRHTLASGSLPFSCLNQACVKDAACLVVDERGEMSAPVQFIFVSTSSQGEGGAEGEKDVRVSHPRLAVVARKRSAGKFVQSYIDIGSGTALANACTTVRVDRRAEVQHLHANELGPRGLMFDAVSVTTKKLSAYKNVFVNVGGELGRVNFQATLNGTEGRVDTEGVTITGEEQELDIHSYIHHRRKGGESNMYQCNIVSGDSHCVFKGRMKLEPRARGVTADQLIRSIMLTDSCTVDAMPTLEVCSGDVDCTHGATVADIDENEAFYLQSRGISRREARQVLMMGFAAQVYNQIPCEKMKKRLGERLYDVCPDVGIAKKYEYLSV 572          
BLAST of mRNA_P-littoralis_Contig182.45.2 vs. uniprot
Match: A0A7S3RNJ1_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3RNJ1_9SPIT)

HSP 1 Score: 226 bits (576), Expect = 3.500e-61
Identity = 161/472 (34.11%), Postives = 233/472 (49.36%), Query Frame = 3
Query:  396 AVPRRDPRV---WFDAIRDGALPRPDTLVDLSKAGEVELAELALPNRKQEPYRYTDLESLYRTDFTSGSESGGAAAAATAEAVKPYL-------LEACQGQQMVFVNGLFSEELSDVSAL------GGVEGLVVGHVGEMEGATLEQAKEMLSYLPEKDADFRTTQGSLPFASLNQACFADAGVIMVADGVTVEKPIQVVFFSEGAEG----PTVSHPRLVVKAGADSKLTFTQNYLSQGGVCLANGFTRVLVGDRATVTHDYAEEMSASDRLVDTVSVDQHVNSTYSVNQVLSGAFDARANFQIDLLESGSHCNVFTAALTTKNQRQDVHSTIRHKAKGTTCLQEQRNVVSDTADCVFKGRIVIDQVAQKTDANQLCRTLLVSDKARVTVMPSMEIIANDVKCTHGATICDLEEEELFYLMSRGISKIQAKTLVIKSFADIVVKRFIDPDLRERLTAKLLEAAPREDRATR 1751
            A PR  P     W         P  + L  + +     LAE   P RK E +R TDL SL+             AA   A+ V   L        EA    ++VFV+G+   ELS++ AL      G + GL      ++  A +   +E    LPE+ AD RT  G   F+ LNQA  AD   I +  GV V  PI+++  S G       PT SHP +VV     S++   Q Y   G     NG TR+ +   A++ H Y +E S+    +D+V V     + Y    V SG   AR N  ++L    +  ++   +L    Q  D+HS +RH ++     QEQRN V+  A  VF+G + +   A  T ANQLCR+LL+SD+ARV V P++EI+ +DV+CTHGAT+ DL++E +FYL SRG+S+ QA+ L++  +A  V+ +        R++ K  E A  E+ A R
Sbjct:    1 ATPRAPPAAADPWLTQALAVRRPAANGLASIREEASAALAEARRPGRKDEAWRRTDLSSLFAATLAPP------AAHPDAQFVAQMLDDNDNGTEEAQPSARLVFVDGVVDAELSELGALPAGAYAGPIAGLGAVASDDVVAAVIAAVRE----LPEQGADHRTELGCYTFSVLNQAALADVTCIYLPRGVKVTSPIRLLHLSSGGANTDALPT-SHPNVVVWMEEQSEMLLMQQYCGTGAY-FTNGLTRIRLDANASLAHAYVQEQSSEAVHIDSVLVRCDAGARYDTQVVQSGGRIARVNLGVELAGPHATTSISGISLANDGQLSDLHSAVRHASRDCVSGQEQRNAVAGRARVVFRGAVQVPLGADNTTANQLCRSLLLSDRARVDVSPNLEILTDDVQCTHGATVADLDDEMIFYLQSRGLSRAQARVLILAGWARSVMDKVPSAGAVRRVSTKAAELA--EEGAAR 458          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig182.45.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JB34_9PHAE1.410e-30380.65SufBD_N domain-containing protein n=1 Tax=Ectocarp... [more]
D8LLY7_ECTSI4.390e-28380.96FeS assembly protein SufD n=1 Tax=Ectocarpus silic... [more]
A0A836CQZ7_9STRA3.160e-11645.84SufBD_N domain-containing protein n=1 Tax=Tribonem... [more]
A0A7S2MCQ0_9STRA1.790e-8338.92Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2W6I7_9STRA4.880e-7935.43Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S4DBS2_HETAK2.790e-7441.79Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S2HD05_9EUKA7.080e-6836.02Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
A0A0M0J7I3_9EUKA2.020e-6234.82Assembly protein n=1 Tax=Chrysochromulina tobinii ... [more]
K8YSK7_NANGC8.040e-6234.70Assembly protein n=3 Tax=Monodopsidaceae TaxID=425... [more]
A0A7S3RNJ1_9SPIT3.500e-6134.11Hypothetical protein (Fragment) n=1 Tax=Strombidin... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig182contigP-littoralis_Contig182:184448..195652 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LLY7
Preferred namesufD
PFAMsUPF0051
Model size3120
Max annot lvl2759|Eukaryota
KEGG koko:K09015
Hectar predicted targeting categorychloroplast
GOsGO:0000003,GO:0003006,GO:0003674,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006790,GO:0006996,GO:0007275,GO:0008150,GO:0008152,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009657,GO:0009668,GO:0009790,GO:0009791,GO:0009793,GO:0009987,GO:0010027,GO:0010154,GO:0016043,GO:0016226,GO:0022414,GO:0022607,GO:0031163,GO:0032501,GO:0032502,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044085,GO:0044237,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0048316,GO:0048608,GO:0048731,GO:0048856,GO:0051186,GO:0061024,GO:0061458,GO:0071840
Exons8
Evalue8.52e-285
EggNOG OGsCOG0719@1|root,2QSI1@2759|Eukaryota
Ec32 ortholog descriptionSUF system FeS cluster assembly, SufBD
Ec32 orthologEc-14_002160.1
Descriptionthylakoid membrane organization
Cds size1710
COG categoryO
BRITEko00000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig182.45.2prot_P-littoralis_Contig182.45.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig182 184510..194304 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789878.6933348-UTR-P-littoralis_Contig182:184447..1845091680789878.6933348-UTR-P-littoralis_Contig182:184447..184509Pylaiella littoralis U1_48UTRP-littoralis_Contig182 184448..184509 +
1680789878.7885308-UTR-P-littoralis_Contig182:194304..1956521680789878.7885308-UTR-P-littoralis_Contig182:194304..195652Pylaiella littoralis U1_48UTRP-littoralis_Contig182 194305..195652 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789878.7101154-CDS-P-littoralis_Contig182:184509..1849311680789878.7101154-CDS-P-littoralis_Contig182:184509..184931Pylaiella littoralis U1_48CDSP-littoralis_Contig182 184510..184931 +
1680789878.7208333-CDS-P-littoralis_Contig182:188577..1888811680789878.7208333-CDS-P-littoralis_Contig182:188577..188881Pylaiella littoralis U1_48CDSP-littoralis_Contig182 188578..188881 +
1680789878.7291698-CDS-P-littoralis_Contig182:190311..1904641680789878.7291698-CDS-P-littoralis_Contig182:190311..190464Pylaiella littoralis U1_48CDSP-littoralis_Contig182 190312..190464 +
1680789878.7372584-CDS-P-littoralis_Contig182:191107..1912781680789878.7372584-CDS-P-littoralis_Contig182:191107..191278Pylaiella littoralis U1_48CDSP-littoralis_Contig182 191108..191278 +
1680789878.749033-CDS-P-littoralis_Contig182:191728..1918631680789878.749033-CDS-P-littoralis_Contig182:191728..191863Pylaiella littoralis U1_48CDSP-littoralis_Contig182 191729..191863 +
1680789878.7572188-CDS-P-littoralis_Contig182:192347..1925331680789878.7572188-CDS-P-littoralis_Contig182:192347..192533Pylaiella littoralis U1_48CDSP-littoralis_Contig182 192348..192533 +
1680789878.767855-CDS-P-littoralis_Contig182:193613..1938051680789878.767855-CDS-P-littoralis_Contig182:193613..193805Pylaiella littoralis U1_48CDSP-littoralis_Contig182 193614..193805 +
1680789878.7766838-CDS-P-littoralis_Contig182:194157..1943041680789878.7766838-CDS-P-littoralis_Contig182:194157..194304Pylaiella littoralis U1_48CDSP-littoralis_Contig182 194158..194304 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig182.45.2

>prot_P-littoralis_Contig182.45.2 ID=prot_P-littoralis_Contig182.45.2|Name=mRNA_P-littoralis_Contig182.45.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=570bp
MLAVAAGLLSVAPTNSFLSAPLSSAVSGAAGSGSAAAAAASRTSTGESRL
TMQASAASRRDGSRGNGAAGGAGVQRLCATGVATEDNQGAVGSLLETQRK
GVSNNDMQPFVAVPRRDPRVWFDAIRDGALPRPDTLVDLSKAGEVELAEL
ALPNRKQEPYRYTDLESLYRTDFTSGSESGGAAAAATAEAVKPYLLEACQ
GQQMVFVNGLFSEELSDVSALGGVEGLVVGHVGEMEGATLEQAKEMLSYL
PEKDADFRTTQGSLPFASLNQACFADAGVIMVADGVTVEKPIQVVFFSEG
AEGPTVSHPRLVVKAGADSKLTFTQNYLSQGGVCLANGFTRVLVGDRATV
THDYAEEMSASDRLVDTVSVDQHVNSTYSVNQVLSGAFDARANFQIDLLE
SGSHCNVFTAALTTKNQRQDVHSTIRHKAKGTTCLQEQRNVVSDTADCVF
KGRIVIDQVAQKTDANQLCRTLLVSDKARVTVMPSMEIIANDVKCTHGAT
ICDLEEEELFYLMSRGISKIQAKTLVIKSFADIVVKRFIDPDLRERLTAK
LLEAAPREDRATRGTYQSI*
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mRNA from alignment at P-littoralis_Contig182:184448..195652+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig182.45.2 ID=mRNA_P-littoralis_Contig182.45.2|Name=mRNA_P-littoralis_Contig182.45.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=11205bp|location=Sequence derived from alignment at P-littoralis_Contig182:184448..195652+ (Pylaiella littoralis U1_48)
TGGGTCGACGAGAACAACAGAAGAATGGCCGTGGCGGCAACGAATCACGG AGGCTGTCGACCATGCTGGCGGTTGCGGCGGGCCTTCTATCCGTCGCGCC CACCAACTCTTTCCTCTCCGCTCCTCTGTCCTCTGCTGTGAGCGGAGCAG CAGGGTCGGGGTCAGCAGCGGCAGCGGCAGCGTCGAGGACAAGTACCGGG GAATCACGATTGACGATGCAGGCTTCAGCAGCTAGTAGGCGTGATGGATC CAGGGGAAACGGTGCTGCAGGAGGGGCGGGGGTGCAGCGGCTGTGCGCCA CGGGTGTCGCAACGGAGGATAACCAGGGAGCGGTCGGGAGCTTGCTGGAG ACACAACGAAAGGGGGTGTCGAACAACGACATGCAACCCTTCGTAGCGGT GCCCAGGCGCGATCCGCGGGTGTGGTTCGACGCCATCAGGGACGGGGCCT TGCCTCGACCAGATACTCTCGTCGATCTCTCCAAGTGAGCGAGAGTTGAG AGCTACAGAGACGAGTCATCCAGCGTGACCGTGTGTCAATCATACACTTT TTTTTTTCACGAAAAAACAAGACAAAAGGAAAGCGGCACGTTGTTTCAGC AATACAAAATACTCCGTACGAAGCACCCAGAAGGAAGGTGGGGGTAACTC CTCCTGTGTTGACCTTCCTCCTGTGTGACCCCGTCGATGGGCCTAGCCTG TAGTTTGAACCGCAAGGTGCAGACTAGTGTGCCAGAGAATATGGGATGAC AACACAACACGCTTCGTCTGCCAACAACTGCCGTTTCCTCTAGACTACTA CTGCACCTCTTACGTATCTGGTGTGCGACATGGCTGTATGTACTGCTGTC CAATTGTTGTTGTGGCGAAGCCGAAGTACAGATGTAGGTAAGCCCGGCAA CAGAGCGACGCTCTCAGTATCAGAGATTTGCCCGAAGGACTGCTGCCTGC TGTCTGTCCCTGTAGTCTGTACCAAATTCTGTAGCGCGATATGCCAGCAC TATATCGGACCATGTATACTGCGGTGCTTGCGGAGCCCCCCCCCCCCCAG TAGACGCGCCCAAACAGGCACGATTCTTTCAAGGTCGAGGGTCAAATTGT GAGAGAGCAATCCACTGCCGAAATGAAATTCGTTGCTCTGTTACATCACA TGATAAGAGCAAGCCAATCACAGCTCCCCGGTGACAGAAATCGGAGCCAA AGACAGACACAAACATAGGGTCGCCGCCACCCGCCACCTCCTCTAGCCAC GCCATGCGCGGGTGGAGACTTTAGCAAACTCCCGAACAAGCTATACTTCT TGCTCTCCTAATGTAGGGGAGGCATGACGCAACGCCGCAGGGGAGTCGCT AAGCTTTCAACAGCAGTGTGTGCTGAACTTCTGCTGTACAGGCAGTTATA TTCATCACGTATCATTCTTGCTGCATGCATCTCGTATATGACTTTCATCG GATGTACTCCAGTATGATTGATGGCGACGCACTTACCGCTGTTGAGGAAT AGCGACACGTCCCTGAACAGCGGCACATTTTCACCCCTAACGCTTCCCCT CGCTACCCCGGGGCCCCCCTACTGCTGTACGCCGCTTTCGTTTGTGAACC TGTCGTGGGTTGATCACTTCTGTCGGTGGTCGAAATCCGCAAGTCCCTGG TCCTGTCCACAAACAGTTGTCGACCTGGTGTAGTGTTACAGACAGCAATC TCCGCGCGCGGGCGGACGAAAACCCTCCACTTGTACTATGCATCCAGCAT TGAGTTTACGTTACTTCTGGATGCTTTTTGTATTGTTTGGTGCCCTTTGA GTCATGGTGTGTTAACGGCAGGTTGGAAATCACGGAAATGTGTCCACAGG CGCGATCGGCCGCAAGGTCGGTGTCTTCTCGAAGCACCTTTTTTATCGCA TATATCTGTACTGTTTTTGCAGCACTCTATCGTGTACCAGTACTTCGGTA TTATTTTTGGCATTCTTTGAAGGAAACATGTACAAGTGTATCCTCCTCGT CTAAGTTGTTGCGTTAGAGAAGTCGATACGCCCATCTGCAGCACACGCCT AGCCCACACGTCCACACGCACACACCTGATGCATGTTACCACCACATGAG AGCAGACACAAACGACTTAACTTGTGTGACGCTGAGTCTCCACGCGTCGG TTTTTGATTGGTAAGACTTCTGATCGATTCCTACAGACTTTTTTTCTAGC CTATCGATGCCTCGGGGCCTCAGATAACCACCGGAGAAGAAGGACCAGGC ACATAGCTCACGGGCGATGGCTTTGATATTGTTGTGGCTTCATTCGTTCG AGAGTAATGGACGAAACCTTAAACTGATAGCGGCGCAAAATACCTTGCTG CTACCTGCTGCTGCTGCTGCTGCTGCGGGCTTTTCTTCTTTTTTCCTATT TTTATTCACACCTCATCGACGCCTGCAATTTTTTTTGAACCTACCGATGC CTCGCGGCCTCAAACGACCATCGGAGGAGCACGGCCATACACACAGCTCA CGAAGAATGGCTTTGTTATTGCTGTTGCTTCATTCCTTCGAGGGTGTGAT CAACAAATACGCCAGCTAATTGACGAAATGAATGTCAACCGTCTGAGAAG GGAGATGTATTTTCGGAAGATTCAAACTAAATAAATGACCCGTGAAAAAA ACAATGTCACCTGCAGTTCCTTGAAAGAAGCGGTGCTCAGAAAAATCCTG TTGGAATTGTTGTCATTTTAAACAAGGCAATTTCTGATAAAGGCTTTTCC GACCTAGAAGTAGCCCTCACCCTTAAAATGTTGTCGGGAGACTTTATTTT TGGGAAGTGAAGTGCTGAGGGCGTGCACGTTTCTTCTCTCCTTCGAGCCG CAACTACGACGCGGTGCGCCAGCAGCACTCGACCACTGTACCGCGCACGC GAGGGGGGGGGAGAGAGAAAGAAGGAGGGCACAATACAGCATCGACTAAG CGAACACCGATTGGTAAATTTTTCTCACGTGCTCGTGCTTTTTCTGCATA CGGTAGTTTTTTTTTAAAGAAAATTGCCAGACCTCTCTCAGCTGAATGGA TTTTTTCGGCTTTCTCTATTGTGAGCACTTGTGTCTTGTGTACGAAGCAC TTGTTATGTAGGATGCTCTGCTGTAGTGATGTGACCGATGAGGGCGACAG CGTTGACGGCATCCCCACGAGCTCTTTTTTTTTTCACCTGCTTCGATTCA CACGCCCACCCCCGATACACGCACACAAATTCATGCTCGCGGGTGTGTGG GAAGGGCCCACGACGAAAGTGCTATATTTCTACCGCACGAGTACGCAAGG TGGGACTTAGAAATAAAGCTCGTGGGTCCGGGTGGCAGGAGTGTTTCGAA AGCCAAAGAAAGTCTTTGGCTGACCCCTCGCGAACCCTGACCCCAACTCA GCAAAGACCGCACTAGTCAAAGATACCCGCAGAGAAAGGGCCGCCGTCAG AAGGGTGCTGAAGAGCCGCCAGTTGTGAACAACGGTGCTCGTACCGGACG AAGAATTCCAGATTGCGGGCAAAAAACGTCGGGCTCACGGTACATAATCA AATATCCAGATGACCGTGCCCATGCACCGCAGCGGTCGAAGCAGGTGCTC AACCGTTGGGTGGAACTTCGGTATCGTATGGTACGAGTGGCGTTCGGTTC ATTTTTCTGTTGATTCGAAGGCTGGACGGACCCTTCCGCCCCAACTTCCC CGGCGGTATTTTCGCCCTCGGGGGGGGGGGCGTGGTTGATAAACCGGGGG GGGGGGGGGACTTCTGTGGTCGACAAAATCTTTTTTTACTTTTGGACCCC ATGAAGTAGACGTGCTTGTTCGGTTGTCGGCGACTTGGCGCGGAATCTGC TAGTATGGTCAGGCGGGTGGTTACCGCGGTCCGCGCGAGTATAACACTGA TGAGGCACATACGTACACACACGGACGGACGCATGCATGCACGCCCGCAC ACGCCCGCCCGCATACACACCCTCCGTGTCAATTTTCCCCCCGTTTGTTT CGCCGCTTCGTCATTTCTGTGAGCGTGGAACATAACGTGGTCGTCGCGCG CATGCTCGGCTCGGCTCTGGCTTTACATGTTTTCGCTAACCCAATGTTCT GAACAAAACAAAACAAACAAACGAAAACAGAGCGGGCGAGGTGGAGCTCG CAGAGCTAGCGCTGCCAAACCGCAAGCAGGAGCCCTACCGCTACACAGAC CTCGAGTCTCTCTACCGAACCGACTTCACGTCGGGAAGCGAGAGTGGCGG CGCCGCGGCGGCGGCGACGGCGGAAGCGGTCAAGCCGTACCTGCTGGAGG CCTGCCAGGGGCAGCAGATGGTCTTCGTGAACGGGTTGTTCAGCGAGGAG CTCAGCGACGTGTCCGCCCTCGGGGGCGTGGAGGGTCTGGTGGTCGGCCA CGTCGGGGAGATGGAGGGGGCGACGCTCGAGCAGGTGTGTTGTGTCGGTG GACGTCGTGAACGTTTTCGGAACTGCTGTAAACTCGTGTCGTATCAATCA TATACATGCAGAGCATTGAAGAAGAAAAAATACACACAGCAAAAGTATGA TAGTGTAGTAGTAGAAGGTGGCACTTGCATAGGGGGTGTAAGACTTGAAT CGAGACCGTGTATTGTATGGGTCCTTCTGTTGTTGTTCTTGTCTGAGCGG GGGAGGGGGAACGGGGGACGGGAAGGAAGGGGGGTGGGAGGGGAGGGGAG GAGAGGATATGAGCGCGTGCGAGAGTTTTCGGCATGATGTGATGTGTCAG CAGCGAATATGCTCCTCTCCTGCTCCGCTTGGTGTGTTGTTTGTGATATC ACGGACGATAGTCGGACGAGCTGAAACTGTGTCACACGACGTACAGACAG TACAGCGTGGAAAACGGCTTTGGTTCTGGACAGAGAGAAGCGATGGGTGG GAACGCCCCCCGGCAGAGCCCAAGGACAAGTCTTACGTTTTGATACGCTT TGTATAGGTACAAACATATCGAAGTGTATCATATGGCATCATATATGTTG TGTCTAGTGGTTTGCCCGTTTTTTTGGGGAACGTTTGCGTGCGCGCCCAA GACGCTCTCGTGTTCCCCCCCCGACGAAAACAAAACGCCATTTTTCTTTT CTTTTCTTTTCGTGACCCGAAACTACTCTTTATTCTCTGCTGCTGACGAA AGCGGTTGTTTGCCGCACACCGCAGTAAATGATGCTGCTGTATGATACCG CGCGAAGCGATCCTCTTTTCGTACGAACAGGAGGCCTCTTCTACGATATG CAACGTTTTTCTCCCCGGCGCGCATGTTAATCAAGCACACACACACACAC ACACACACACACACACACACACACACACACACACACACACACACACACAC ACACACACACACACACACACACACACACACACACACACACACACACACAC ACACACACACACACACACACACACACACACACACACACACACACACACAC ACACATACACACACACCATGTGTGGTACCGCCGTAGGTATTATCGTGCGA GACCGAAGGAGGTTGGAAAAAAAAAAAACGAGAGAAGCCCGGCGGTGTAT ATATGCATCGTGGCAGGAGGAAAAAGAAAGATGTGAAACCGAAGGAGGTA CAGCAGTACGGTATATGACACGGCGGGAAATAAAGAAGGGCAAGTATGAT TCGGCGGTGTTGTCATACGGAATAGATGCGATAGGAAAAGAAAAAGTTAA AGCAACCAATAAATAGAACAACCCCCGTTCCCCGCCCGCGCCAAAAAAAA AACACTTACAAGTGTGCGTACACAAGTGTGTATACAAATCAAATAATTTC ATATCATGTAATATCATACGTATATTTTATCATCATATGTCTACGTGGGT GATCGGTATCATAGGCGAAGGAGATGCTGTCCTACCTGCCCGAGAAGGAC GCCGACTTCCGGACCACGCAGGGCTCGCTGCCCTTCGCCAGCCTCAACCA GGCCTGCTTCGCGGACGCGGGGGTCATCATGGTGGCCGATGGAGTCACGG TCGAGAAGCCCATTCAGGTATACTATACGTGTGCAGTGTGATTCGTGTGT AGAATGGCACATTCCGCTGCTGCTGCTGCTGCTGCTGCTGTGCGTGCCTG GTGCGTGGTGATGCGTATCATACATGTATGGTATGGACGATGTGACTTTT TGTCGCTCATCGCTCATCTCGCGACGCTCTTTTTTTTTTTCAGACGGCGT GAAAAAAGAAGAGGGTCAGCAGCAGCCCCCCCCACCCCCCCCCCTGCTGC CCCCAACGACCATCAATCAGTCTTATGTTCCTCTATAATTTTCTGGATTT TCTGTCCTCGTCCTCGTGTCACTCTGCTGTTCCCACCCGCCCACGTGAGG CGCACACGTACACGTATCATGGCTACCAGGCACGCAGGGCAGGATCCGTT TTTTTTTTTGTACTTGGAAGTATTATTCTTGCGATGACCAAGGGGGCATG CCATGACCAAATCCCACCTTCCGGTGTTTTGCTTGCCCCGCCAGCACAAT ATTCCTCGCGCCAGCGAAAAATTTCACCTCTGATTGAATACGATACGATT GGTTTTGATATCACAAAGGTGTGTCTTTTTTTTTTTTCCCACCGTGCCGT GTTCGTCGCGATCTCTTGTTTGTTTTGTGTGTTTTGTGTCTGTGTGCACG ACATGGTAAGGTTGTTTTCTTTTCGGAGGGGGCGGAGGGGCCCACCGTCA GCCACCCCCGGCTGGTGGTCAAGGCCGGGGCCGACTCTAAGCTGACCTTC ACGCAGAACTACCTGAGCCAGGGCGGCGTCTGCCTCGCCAACGGCTTCAC CAGGGTACTCGTGGGAGACCGCGCCACCGTGGTGAGATTTTTTGCCGGTA TAGGGGAGGCTGGTGGTGGTGATAGTTTTTGCCGGTTAGGGAGGTGGGTT GGATAAGGCAAAGAGAGAGCGAAAAGGTGCGCAAGGGGGCGGGGGCGAGA GGACGGGGGGGGGCGGGATGTGTGTGTGTGTTTGCGAAGGGGGGTATCAA ATCCAGCCAGTATACAATACACGAAGCTATTTTCTTGTTTGAACATTTAA CAATAACAAGCGTAGGTTGCGCCGCGAGACAGGCAAGCTTTTTTTTCAAA CTTGTGTCTTTTTCCCTGCTCCTTAAATTCAATTTCTGCGAGAAGCATTT TTTTTTCTGAACGCCCCCCCTCCCCCCCCCCCTCCTTTCGTCCCCCTCCT TCTCCTCCCCTCCCCCCTCGTCTTTCTCCGTCCCTTTTTTGTTTTTCTGT CTTGTCGGACGTGACCTCTACGGACGGACAGACCCACGACTACGCCGAGG AAATGAGCGCTTCCGACCGCCTCGTGGACACGGTGTCCGTGGACCAGCAC GTGAACTCGACCTACTCCGTCAACCAGGTCCTCTCCGGTGCCTTCGACGC CAGGGCCAACTTCCAGGTGATCGGCGTTTCGTTCCGTTTTGTTTCGGTTT CTTCCCGAGTGAAACAAACCTCTGGAGTCTAGCTCGCATTTGCATGTACC GTGTTGACCGACCGTGGCGCCGGTTGTCTTATCTGTTTGCAGTGATGTGT TTATTTATTTATTTATTCATACATTCATTCGTTCATTTCATTTCATTCAT TTTCATCTATTTCACAGCATCACTGGTTCAAGACTTCCTTCACGCATACA ACACCTCTGTCAACTTTCCCGTTCTATTTTTTTTCGTTTTTTATGACGAA TCGACCTATTTCTGGACATGAAATCGTTGTTGTACTTAACACGACAATCC GGCGATCGTCATCTACTCTATGCTGATCATTTAGTACTTTGCTTTCGAGA CGGAGCTCTGCCGAAACAGCATCAGTTGAACTTTTCGATCTTATTTTTCG ATTTCGTTTCTTCTCGGCTTTCTCTTCGCTTCCGTTGTTTTCTTTGACAG ATCGACCTCTTGGAGTCGGGCTCGCACTGCAACGTGTTCACCGCGGCTCT TACCACTAAGAACCAGAGGCAAGACGTGCACTCCACCATCCGCCACAAGG CGAAGGGCACGACCTGTCTCCAGGAGCAGCGCAACGTGGTCTCCGACACG GCGGACTGCGTATTCAAGGGCCGGATCGTCATCGACGTGAGTTGGTTTTG CCACTCTTAATTTTTTTTCATTCGTCCTGCACGATGTACTGTATCAGTCA TGTACGTCGGATACATGTTTGGATGTATACAATGTATGTATCGATGTATT TCCGTGCGTATGTATGATATGAGTGTATCGATTTGGATTCGTGTGTATGT ACGCAAGTATTGATGTATCGATGCATGTATCGTATCATATGTGTGTTGTA GTTTCATCCGAAATTTATCCATGTACTTCCGTGTGACTGACCTACAGGCC GGTACGTCGTCTCTGTGCGTCGCTCCCTCTGGATCCGCCGTCTATTTTGC ATGTTTTTTTTTCGTCTCCATTCCCCGCCTCTTAATTCGTGTCGTTTGGT GGTCTTCTCCGTTTTCTCTCGCTCCGTACGATAAAAACTTGGCACACTTC GCAATGATACATGCTCGAAGTATACGGTATTATTTTGTTTCTGTTTCTGT TTCGGACTGTGTCCACAGCAGTAATTCTTCCTTCCTTTCTTCCTTTTATG GGGGGGGCGGGGGAGCGGTGGCCTGTGCGCTGTCTTTCCCTTGCTCCCAA ACGACGCTCTAATCACTGCGTGTGTAGCAGATCATGTGGGGAAAACGTGT GGAGGGCGCCCGACTGTCGGTGGTGAACTGCCTCTAATTATCATGAGAGC GGGCACAGCGCTCTGTTCCGGAAGGGACGAGTAGTCAATGGTCAAATGAC CAAAGCGTGTAATGTGTAAACATGACTCCCCTCGCCCGAGTCCTAGATCT AGAGTCCCTTTCTCCTCAACGTTTTTTTGCCTCCGTGGGTGGCGCCGGGA GACCCGCTCAGTGGGTCTGTCCGTGGTCTGGTCATGCGCGATGAAGGGCG AAAGCATCTGGCACATGCAGTGCGTGATTTGGCCGTTCGACATTTCATAT CATACGAGTAAACACTATTGAGCTGGGAATGAAAGGCAGTATGACAGCTG AAAAATAAAGCTACACAGCTCGATCCCAATATCTTTAGAACGCCCCCCTC CTCCCTCCACCTCCACCTCCACCTGCGGCCCTGCCCTGCCCTGCCCTGCC CCCCACCCGTCCCCAGCAAGTCGCACAGAAGACGGACGCGAATCAGCTGT GCCGCACGCTCCTGGTGAGCGACAAGGCCCGCGTGACGGTCATGCCCTCC ATGGAGATCATCGCCAACGACGTCAAGTGCACGCACGGCGCCACGATCTG CGACCTCGAGGAGGAGGAGCTGTTCTACCTCATGTCTCGCGGCATCAGCA AGATCCAGGTCAGCAGTTAGAGGGCGAGCAGGAGACGGCACAAAGCCAAT GCTTTCTCTTTTGTTTTCACGTGCGTGTATCTAGTCAAGCCTTTAGTCTC AGCGCCCGCTGAAGCCCTGCCCATGTCAAGCTAATTCTGTCTCCACTTCT GCTGCTGCCAAATTCACACCCGCTTGTGCGATAATGTTGTGCACCCCAAC TAAAGGAGTGCGGCACCCAATTGATAATGAGCCGCGGTAGCCGCTCCATC TATCTTCACCCCCCAGTTTGAGAATCGTCGCCCCCAAATTTTGCTTCGAC CCTCCCCCCCCCCGATATCTCGCCTCCGGATGTGCCCCCATTCCTTCCCC CACCCGCCAGGCGAAGACCCTCGTGATCAAGAGCTTCGCCGACATCGTCG TGAAGCGCTTCATCGACCCCGACCTTCGCGAGCGGCTGACCGCCAAGCTC CTGGAGGCAGCCCCCCGCGAGGACCGTGCCACCAGGGGCACCTACCAGTC CATCTAAACTCATCATGAAGAATGAGTTCAAGAGTTACCGGTCTTACTGC TGCAGGAGGTTTATCTAGAGGGTCGGAAGGGGCACCGAGGGGGGGGAGGG GGGGGGGGCAGGTTCGCATGCGGCGAGCGTCCTAGTGTAGCGGCATCCAT TGAGGCTCGTCACCGCCGTGGCGGCGGGGGAGAATGGCGGGGGGGGATTG ATTGCCGCCGTGGGGAGAACAAAAAGGCCCCGACTTACACGAAGAGATCC ATGGCATAACATGGTATGTAGTAATGTAATTGGGGATTATGTCACTGCTG CTGAGGACCGAGCGCGTTTGTTTTGGTTGAACGGAACGATGGATCGGAAC AATTCCCATACATATCTCTGGGAATCCGTGGTGGTGTTTATGGCCGTGAC GAAACCAAAATATTTCGGATCTTTCTCTCGAATCTTTTTTTACACCACTC CCCGGTGGGCTCCCCCCCCCACCCCAACCCCCTCTCCCCGTGCTGTTGTT TCCGCCACACTTCACCCTCTGCCGGTTGAAGCCCAAGGAAGAGGGCCTGA CGTCATCCTAGTATCACAGTCACAGCAACTTGTTCTCTCGTCGTCTAGGA TTGGCTGAGGACGGTTCCTCGTTGTCGGTGTCGAAGCGCGTGGTGAAAGC ACCCAGCTGAAAATGGCCGATTTCAACCACCGAAGATTTTCTACAACTCT GTCGCGGCCTCGCCGAGCTGAGACCGCTGCTACACTTCAGTCGCGCACAG CAGTTCACGAAACTGAGCGGAGCTCCTCGTGTGGTGTGGGAAGGCCCCGA GCGCAGCGGAGAGCGGAGTCGTGGGCAGCGAGAAAGCAAGCTCGAAAGAG AGATATTCTCGGGAAATTGAAGCTGCCAGCCAGCGTGAATTTAAAAACAA TTTGGATTTAACTCCAACCCCACAGAGGGCGAACTATGGAGCTTGTTTGG TGTACGCTACGCCGCCATTCCCCCCACGTACGTGTGTATCCCGGGTGGAC GAACGGGCCCAACATGACTCCACCTGAGTTTCCTAGCGATTAGTGGAGCC ACTGAGATGTCTTACAGCCAAGAGCATGTCAAGTGTACTTTAGACGTGCA GCAGCAGTAGAAGTACTCCGTATTTACTTGTATGATAAAGCAAAAATCGC TGGTTTCTGTAGGTTTTTCATCCCGGTGGTGATGTGGTGTGTAAATATGG GCTCGCTACTACAGCAGTACTGATCTTTGCGAATGCGTGAAATGATTTTC AAGCCGATGTTCCCTCTTGCAAAATGCGTATCAACGTAATTTAACGATAT TATCTCGCGCACAAGTAAAATGAGTCGCCGCAACTTTCAACTTTCATAAA TCCCA
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Coding sequence (CDS) from alignment at P-littoralis_Contig182:184448..195652+

>mRNA_P-littoralis_Contig182.45.2 ID=mRNA_P-littoralis_Contig182.45.2|Name=mRNA_P-littoralis_Contig182.45.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1710bp|location=Sequence derived from alignment at P-littoralis_Contig182:184448..195652+ (Pylaiella littoralis U1_48)
ATGCTGGCGGTTGCGGCGGGCCTTCTATCCGTCGCGCCCACCAACTCTTT
CCTCTCCGCTCCTCTGTCCTCTGCTGTGAGCGGAGCAGCAGGGTCGGGGT
CAGCAGCGGCAGCGGCAGCGTCGAGGACAAGTACCGGGGAATCACGATTG
ACGATGCAGGCTTCAGCAGCTAGTAGGCGTGATGGATCCAGGGGAAACGG
TGCTGCAGGAGGGGCGGGGGTGCAGCGGCTGTGCGCCACGGGTGTCGCAA
CGGAGGATAACCAGGGAGCGGTCGGGAGCTTGCTGGAGACACAACGAAAG
GGGGTGTCGAACAACGACATGCAACCCTTCGTAGCGGTGCCCAGGCGCGA
TCCGCGGGTGTGGTTCGACGCCATCAGGGACGGGGCCTTGCCTCGACCAG
ATACTCTCGTCGATCTCTCCAAAGCGGGCGAGGTGGAGCTCGCAGAGCTA
GCGCTGCCAAACCGCAAGCAGGAGCCCTACCGCTACACAGACCTCGAGTC
TCTCTACCGAACCGACTTCACGTCGGGAAGCGAGAGTGGCGGCGCCGCGG
CGGCGGCGACGGCGGAAGCGGTCAAGCCGTACCTGCTGGAGGCCTGCCAG
GGGCAGCAGATGGTCTTCGTGAACGGGTTGTTCAGCGAGGAGCTCAGCGA
CGTGTCCGCCCTCGGGGGCGTGGAGGGTCTGGTGGTCGGCCACGTCGGGG
AGATGGAGGGGGCGACGCTCGAGCAGGCGAAGGAGATGCTGTCCTACCTG
CCCGAGAAGGACGCCGACTTCCGGACCACGCAGGGCTCGCTGCCCTTCGC
CAGCCTCAACCAGGCCTGCTTCGCGGACGCGGGGGTCATCATGGTGGCCG
ATGGAGTCACGGTCGAGAAGCCCATTCAGGTTGTTTTCTTTTCGGAGGGG
GCGGAGGGGCCCACCGTCAGCCACCCCCGGCTGGTGGTCAAGGCCGGGGC
CGACTCTAAGCTGACCTTCACGCAGAACTACCTGAGCCAGGGCGGCGTCT
GCCTCGCCAACGGCTTCACCAGGGTACTCGTGGGAGACCGCGCCACCGTG
ACCCACGACTACGCCGAGGAAATGAGCGCTTCCGACCGCCTCGTGGACAC
GGTGTCCGTGGACCAGCACGTGAACTCGACCTACTCCGTCAACCAGGTCC
TCTCCGGTGCCTTCGACGCCAGGGCCAACTTCCAGATCGACCTCTTGGAG
TCGGGCTCGCACTGCAACGTGTTCACCGCGGCTCTTACCACTAAGAACCA
GAGGCAAGACGTGCACTCCACCATCCGCCACAAGGCGAAGGGCACGACCT
GTCTCCAGGAGCAGCGCAACGTGGTCTCCGACACGGCGGACTGCGTATTC
AAGGGCCGGATCGTCATCGACCAAGTCGCACAGAAGACGGACGCGAATCA
GCTGTGCCGCACGCTCCTGGTGAGCGACAAGGCCCGCGTGACGGTCATGC
CCTCCATGGAGATCATCGCCAACGACGTCAAGTGCACGCACGGCGCCACG
ATCTGCGACCTCGAGGAGGAGGAGCTGTTCTACCTCATGTCTCGCGGCAT
CAGCAAGATCCAGGCGAAGACCCTCGTGATCAAGAGCTTCGCCGACATCG
TCGTGAAGCGCTTCATCGACCCCGACCTTCGCGAGCGGCTGACCGCCAAG
CTCCTGGAGGCAGCCCCCCGCGAGGACCGTGCCACCAGGGGCACCTACCA
GTCCATCTAA
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