mRNA_P-littoralis_Contig182.45.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig182.45.2 vs. uniprot
Match: A0A6H5JB34_9PHAE (SufBD_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB34_9PHAE) HSP 1 Score: 867 bits (2241), Expect = 1.410e-303 Identity = 475/589 (80.65%), Postives = 513/589 (87.10%), Query Frame = 3
Query: 9 REQQKNGRGGNESRRLSTMLAVAAGLLSVAPT-NSFLSAPLSSAVSGAAGSXXXXXXXXXRTSTGESRLTMQASAASRRDGSRGNGAAGGAGVQRLCATGVATEDNQGA-VGSLLETQRKGVSNNDMQPFVAVPRRDPRVWFDAIRDGALPRPDTLVDLSKAGEVELAELALPNRKQEPYRYTDLESLYRTDFTSGSESGGAAAAATAEAVKPYLLEACQGQQMVFVNGLFSEELSDVSALGGVEGLVVGHVGEMEGATLEQAKEMLSYLPEKDADFRTTQGSLPFASLNQACFADAGVIMVADGVTVEKPIQVVFFSEGAEGPTVSHPRLVVKAGADSKLTFTQNYLSQGGVCLANGFTRVLVGDRATVTHDYAEEMSASDRLVDTVSVDQHVNSTYSVNQVLSGAFDARANFQIDLLESGSHCNVFTAALTTKNQRQDVHSTIRHKAKGTTCLQEQRNVVSDTADCVFKGRIVIDQVAQKTDANQLCRTLLVSDKARVTVMPSMEIIANDVKCTHGATICDLEEEELFYLMSRGISKIQAKTLVIKSFADIVVKRFIDPDLRERLTAKLLEAAPREDRATRGTYQSI 1769
R+ Q++ GG++S R+ST+LAVAAGLLS+APT +SFLSAP+ GA GS R STGE+R A R+ G + L ATGV TEDNQGA VGSLLETQ+KGVSNN+M PFV VPRRDPRVWFDAIR+GA+PRPD+LV+LSKAGE ELAELALP RKQEPYRYTDLESLYRTDF S + + AAA TA A+KP+LLEA QGQQMVFVNG+FS+ELSDVSALGGVEGLV GH+G +EG L+QAKEMLSYLPEKDADFRTTQGSL FASLNQACFADAGVI+VADGVTVEKPIQV+FFSEG E PTVSHPRLVVKAGADS +T TQ+YLS+GGVCLANGFTRVLVGDRATVTHDYAEEMSASDRLVD VSVDQ NSTYSVNQVLSGAFDARAN QIDLLE+GSHCNVFTAALTT NQRQDVHSTIRHKA+GTTCLQEQRNVVSDTADCVFKGRIVIDQVAQKTDANQLCRTLLVSDKARVTVMPSMEIIANDVKCTHGATICDLE+EELFYLMSRGISKIQAKTLVIKSFADIVVKRFIDP+LRERLT KLL AAPR DRAT+GTYQSI
Sbjct: 165 RKAQRSRNGGSKSPRVSTVLAVAAGLLSLAPTADSFLSAPMR----GAGGSGAAEGLR--RRSTGEARSAR----AGRQVG------------RVLVATGVVTEDNQGAAVGSLLETQQKGVSNNEMNPFVRVPRRDPRVWFDAIREGAVPRPDSLVELSKAGEAELAELALPTRKQEPYRYTDLESLYRTDFKSAALT--TAAAETAAAIKPHLLEASQGQQMVFVNGVFSDELSDVSALGGVEGLVAGHIGAIEGTPLDQAKEMLSYLPEKDADFRTTQGSLAFASLNQACFADAGVIIVADGVTVEKPIQVIFFSEGEEVPTVSHPRLVVKAGADSHMTLTQSYLSRGGVCLANGFTRVLVGDRATVTHDYAEEMSASDRLVDIVSVDQTTNSTYSVNQVLSGAFDARANLQIDLLETGSHCNVFTAALTTNNQRQDVHSTIRHKAEGTTCLQEQRNVVSDTADCVFKGRIVIDQVAQKTDANQLCRTLLVSDKARVTVMPSMEIIANDVKCTHGATICDLEDEELFYLMSRGISKIQAKTLVIKSFADIVVKRFIDPNLRERLTVKLLAAAPRGDRATKGTYQSI 729
BLAST of mRNA_P-littoralis_Contig182.45.2 vs. uniprot
Match: D8LLY7_ECTSI (FeS assembly protein SufD n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLY7_ECTSI) HSP 1 Score: 807 bits (2084), Expect = 4.390e-283 Identity = 438/541 (80.96%), Postives = 474/541 (87.62%), Query Frame = 3
Query: 9 REQQKNGRGGNESRRLSTMLAVAAGLLSVAPT-NSFLSAPLSSAVSGAAGSXXXXXXXXXRTSTGESRLTMQASAASRRDGSRGNGAAGGAGVQRLCATGVATEDNQGAV-GSLLETQRKGVSNNDMQPFVAVPRRDPRVWFDAIRDGALPRPDTLVDLSKAGEVELAELALPNRKQEPYRYTDLESLYRTDFTSGSESGGAAAAATAEAVKPYLLEACQGQQMVFVNGLFSEELSDVSALGGVEGLVVGHVGEMEGATLEQAKEMLSYLPEKDADFRTTQGSLPFASLNQACFADAGVIMVADGVTVEKPIQVVFFSEGAEGPTVSHPRLVVKAGADSKLTFTQNYLSQGGVCLANGFTRVLVGDRATVTHDYAEEMSASDRLVDTVSVDQHVNSTYSVNQVLSGAFDARANFQIDLLESGSHCNVFTAALTTKNQRQDVHSTIRHKAKGTTCLQEQRNVVSDTADCVFKGRIVIDQVAQKTDANQLCRTLLVSDKARVTVMPSMEIIANDVKCTHGATICDLEEEELFYLMSRGISKIQ 1625
R Q++ GG+ESRR+ST+LAVAAGLLS+APT +SFLSAP+ GA GS R STGE+R G +G+G L ATGVATEDNQGAV GSLLETQ+KGVSNN+M+PFV VPRRDPR+WFDAIR+GA+PRPD+LV+LSKAGE ELAELALP RKQEPYRYTDLESLYRTDFTS + + AA TA A+KP+LLEA QGQQMVFVNG+FS+ELSDVSALGGVEGLV GH+G +EGA L+QAKEMLSYLPEKDADFRTTQGSL FASLNQACFADAGVIMVADGVTVEKPIQV+FFSEG EGPTVSHPRLVVKAGADS +T TQ+YLS+GGVCLANGFTRVLVGDRATVTHDYAEEMSASDRLVDTVSVDQ NSTYSVNQVLSGAFDARANFQIDLLE+GSHCN+FTAALTT NQRQDVHSTIRHKA+GTTCLQEQRNVVSDTADCVFKGRIVIDQVAQKTDANQLCRTLLVSDKARVTVMPSMEIIANDVKCTHGATICDLE+EELFYLMSRGISKIQ
Sbjct: 3 RTAQRSRNGGSESRRVSTLLAVAAGLLSLAPTADSFLSAPMK----GAGGSGAAQGLR--RRSTGEARSAQA--------GRQGDGV--------LSATGVATEDNQGAVAGSLLETQQKGVSNNEMKPFVRVPRRDPRMWFDAIREGAVPRPDSLVELSKAGEAELAELALPTRKQEPYRYTDLESLYRTDFTSAAPT--TTAAETAAAIKPHLLEASQGQQMVFVNGVFSDELSDVSALGGVEGLVAGHIGAIEGAPLDQAKEMLSYLPEKDADFRTTQGSLAFASLNQACFADAGVIMVADGVTVEKPIQVIFFSEGEEGPTVSHPRLVVKAGADSHVTLTQSYLSRGGVCLANGFTRVLVGDRATVTHDYAEEMSASDRLVDTVSVDQTTNSTYSVNQVLSGAFDARANFQIDLLETGSHCNIFTAALTTNNQRQDVHSTIRHKAEGTTCLQEQRNVVSDTADCVFKGRIVIDQVAQKTDANQLCRTLLVSDKARVTVMPSMEIIANDVKCTHGATICDLEDEELFYLMSRGISKIQ 519
BLAST of mRNA_P-littoralis_Contig182.45.2 vs. uniprot
Match: A0A836CQZ7_9STRA (SufBD_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQZ7_9STRA) HSP 1 Score: 375 bits (963), Expect = 3.160e-116 Identity = 215/469 (45.84%), Postives = 299/469 (63.75%), Query Frame = 3
Query: 393 VAVPRRDPRVWFDAIRDGALPRPDTLVDLSKAGEVELAELALPNRKQEPYRYTDLESLYRTDFTSGSESGGAAAAATAEAVKPYLLEACQGQQMVFVNGLFSEELSDVSALGGVEGLVVGHVGEMEGATLEQAKEM--LSYLPEKDADFRTTQGSLPFASLNQACFADAGVIMVADGVTVEKPIQVVFFS------EGAEGPTVSHPRLVVKAGADSKLTFTQNYLSQGGVCLANGFTRVLVGDRATVTHDYAEEMSASDRLVDTVSVDQHVNSTYSVNQVLSGAFDARANFQIDLLESGSHCNVFTAALTTKNQRQDVHSTIRHKAKGTTCLQEQRNVVSDTADCVFKGRIVIDQVAQKTDANQLCRTLLVSDKARVTVMPSMEIIANDVKCTHGATICDLEEEELFYLMSRGISKIQAKTLVIKSFADIVVKRFIDPDLRERLTAKLLEAAPREDRAT--RGTYQSI 1769
+A R DPR WF A++ A P +L+ AG L E+ LP+RKQEPYRYTDLE+++R + + A + E + YL EA +GQQ+VFVNG F+ +LSD SA+ EG+ +VG GA QA M L +LPE A+ T QGSLPFA+LNQACFADA +++ VTVE+PIQV+F + EG EG + HPRL + AG S Q+Y+ +G AN TR +VG A ++H +++E SAS + +DTV D + YS++ V G AR+N Q++L + +HCN+ AAL + +Q D H+ + H A TT Q+ RN+V+D++DC+FKGR+ +D +AQ TDA+QLCRTL++SD+ARVT MPS+EI A+DVKC HGAT+ DL+EE LFYL RGI+ +A+ LVIK FA ++K D +L+ R+ KL+ P+ RA G + SI
Sbjct: 7 LAPKRADPRTWFGALQQQAAT-PAPFRELASAGAATLDEVDLPHRKQEPYRYTDLEAIFRHSYDAT-----AGLPVSQEFAQKYLSEASKGQQLVFVNGRFNAQLSDTSAV--PEGV---YVGSALGAGEHQAAVMGVLDHLPEVGANKNTCQGSLPFAALNQACFADAAAVVIPPNVTVEQPIQVLFVTHAPKENEGGEGGAICHPRLAIVAGEGSSALVMQSYVGEGDY-FANCVTRSVVGKGAKLSHTHSQEQSASAQHLDTVVADLAEEAVYSLSMVACGGLFARSNIQVELNGAKAHCNLNAAALCSGDQSVDFHTQMGHAAPDTTMEQQHRNIVADSSDCIFKGRVRVDGIAQGTDAHQLCRTLMLSDRARVTAMPSLEITADDVKCAHGATVADLDEESLFYLGCRGINAAEARALVIKGFAFDMIKALPDTNLQARVLEKLISMTPKSSRAVTAEGAFSSI 463
BLAST of mRNA_P-littoralis_Contig182.45.2 vs. uniprot
Match: A0A7S2MCQ0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MCQ0_9STRA) HSP 1 Score: 290 bits (741), Expect = 1.790e-83 Identity = 181/465 (38.92%), Postives = 260/465 (55.91%), Query Frame = 3
Query: 423 WFDAI-RDGAL-PRPDTLVDLSKAGEVELAELALPNRKQEPYRYTDLESLYRTDFTSGSESGGAAAAATAEAVKPYLLEACQGQQMVFVNGLFSEELSDVSALGGVEGLVVGHVGEMEGATLEQAKEMLSYLPEKDA--DFRTTQGSLPFASLNQACFADAGVIMVADGVTVEKPIQVVFFSEGAEGPTVSHPRLVVKAGADSKLTFTQNY--LSQGGVCLANGFTRVLVGDRATVTHDYAEEMSASDRLVDTVSVDQHVNSTYSVNQVLSGAFDARANFQIDLLESGSHCNVFTAALTTKN-----QRQDVHSTIRHKAKGTTCLQEQRNVVSDTADCVFKGRIVIDQVAQKTDANQLCRTLLVSDKARVTVMPSMEIIANDVKCTHGATICDLEEEELFYLMSRGISKIQAKTLVIKSFADIVVKRFID--PDLRERLTAKLLEAAPRED---RATRGTYQSI 1769
WF+ + R AL P D L + G+ L + P RK EP+RYTDL S++ TD+ G + E ++PYL E QMVF++G+F E LSD+SALG L +G + + L + + L +PE D D RT QGS F SLNQAC +D I V +GV VE+PIQV+F S P++SH +LVV + + + Q+Y + G N T V +G AT+ H YA+E + ++T++V +S Y + V SG+ +R NF D +G + V T ++ Q D HS+I H A + Q+ RN+VS +C+FKGRI + QVAQ TD+ QLCRTLL++D A+V +MPS+EI+A+ VKC HGAT+ DL EELFYL+SRGI + AK ++ + F V++ +D P RL + + P +D R+ Y S+
Sbjct: 66 WFERVSRKSALSPVVDLLSNTRLKGKDALTRVETPRRKLEPWRYTDLTSMFGTDYCRPQGLGDV----SRETIEPYL-EKSASVQMVFMDGVFCESLSDMSALGS---LSIGGLSSLTPDVLPKVLQALEKVPEMDPTPDRRTCQGSAAFGSLNQACLSDCAYIFVPEGVEVERPIQVLFMSSATLAPSISHTQLVVVVESGASASLLQSYAGVGDGDTYFTNALTTVELGAGATLKHAYAQEAKLGAQHIETMTVSTDGDSIYELTAVCSGSRQSRFNF--DSYMNGENALVDTVSVLLSGGVGSRQVNDFHSSITHNAVNSFSKQKHRNMVSTKGECIFKGRIAVPQVAQGTDSEQLCRTLLLTDDAKVVMMPSLEIVADQVKCEHGATVSDLSGEELFYLLSRGIDRTAAKGILARGFLTEVIRDRLDAYPQTSSRLDQSIKQIVPEDDGLERSVEYEYSSV 520
BLAST of mRNA_P-littoralis_Contig182.45.2 vs. uniprot
Match: A0A7S2W6I7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W6I7_9STRA) HSP 1 Score: 278 bits (712), Expect = 4.880e-79 Identity = 163/460 (35.43%), Postives = 261/460 (56.74%), Query Frame = 3
Query: 423 WFDAIRDGALPR---PDTLVDLSKAGEVELAELALPNRKQEPYRYTDLESLYRTDFTSGSESGGAAAAATAEAVKPYLLEACQGQQMVFVNGLFSEELSDVSALGGVEGLVVGHVGEMEGATLEQAKEMLSYLPE-KDADFRTTQGSLPFASLNQACFADAGVIMVADGVTVEKPIQVVFFSEGAEG--PTVSHPRLVVKAGADSKLTFTQNYLSQGG-VCLANGFTRVLVGDRATVTHDYAEEMSASDRLVDTVSVDQHVNSTYSVNQVLSGAFDARANFQIDLLESGSHCNVFTAALTTKNQRQDVHSTIRHKAKGTTCLQEQRNVVSDTADCVFKGRIVIDQVAQKTDANQLCRTLLVSDKARVTVMPSMEIIANDVKCTHGATICDLEEEELFYLMSRGISKIQAKTLVIKSFADIVVKRFIDPD----LRERLTAKLLEAAPREDRATRGTYQSI 1769
WF+A + A+P P +V+ G+ L + +P RKQE +R+ ++++++ + ++ ++S +++A+ PY+ G VFV+G+F ELSD+ ++ + +V G V + E ML LPE K +D RT QG+ FA+LNQACF D+ I V DGV VE+P++V+F S + PT S+PR ++ G D++L+ Q+Y + GG NG T V + + A + H Y ++++A D + + + L G +R N + L G+ V + +T Q D HS+I H + TT Q+QRN++ +D VF+GRI +DQ AQ TD+ QLCR+LL++D+A++TVMPS+EIIA+ V CTHGAT+ DL +ELFYL SRG++ A+ L+ K F RF D L +++ + E + +++ TY S+
Sbjct: 98 WFEAALEAAVPDTGLPPQVVEKRSEGKTLLPDHNVPQRKQEAWRFNNIQTMFAIEPSTPADSSSV----SSDALAPYMYAETAGATAVFVDGVFRPELSDLGSV--PDNVVFGAVSSVGDRLSETHLGMLDELPEVKGSDHRTNQGAAAFAALNQACFVDSACIYVPDGVQVEQPVEVLFVSTASTSARPT-SYPRAIIAMGKDAELSLVQSYATVGGDKHFTNGLTVVAIDENAKLDHFYVQDVAAGATHYDALIANVSSGGEHKFCTTLLGGEQSRLNCDVHLNGDGARAEVVSVLVTDNRQMADFHSSISHHVENTTSFQQQRNILGGRSDVVFRGRIKVDQEAQNTDSEQLCRSLLLTDRAKITVMPSLEIIADQVVCTHGATVADLSADELFYLQSRGLTPELARALLTKGFVREFADRFTCKDALGQLDDKIEKLVKEVRNKANKSKYNTYTSV 550
BLAST of mRNA_P-littoralis_Contig182.45.2 vs. uniprot
Match: A0A7S4DBS2_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DBS2_HETAK) HSP 1 Score: 260 bits (665), Expect = 2.790e-74 Identity = 163/390 (41.79%), Postives = 225/390 (57.69%), Query Frame = 3
Query: 657 CQGQQMVFVNGLFSEELSDVSALGGVEGLVVGHVGEMEGATLEQAKEMLSYLPEKDADF--------RTTQGSLPFASLNQACFADAGVIMVADGVTV-EKPIQVVFFS-------EGAEGPTVSHPRLVVKAGADSKLTFTQNYLSQGGVCLANGFTRVLVGDRATVTHDYAEEMSASD--RLVDTVSVDQHVNSTYSVNQVLSGAFDARANFQIDLLESGSHCNVFTAALTTKNQRQDVHSTIRHKAKGTTCLQEQRNVVSDTADCVFKGRIVIDQVAQKTDANQLCRTLLVSDKARVTVMPSMEIIANDVKCTHGATICDLEEEELFYLMSRGISKIQAKTLVIKSFADIVVKRFIDPDLRERLTAKLLEAAPREDRATRGT-YQSI 1769
C G+++VFV+G+F LSD++ + G+V G V + L A LS++PE AD RT QGS PF +LN A DA V++V +GV EKP +V+F + EGA SH RL V AGA ++L Q+ G LANG RV VG A V H +E A+ R ++TV + + Y + V G DAR N Q++L +HC + AA ++Q +++TIRH A+ TT Q QRNV+ D V+KGRI +++VAQ+TDA+QLC +L++SD+ARVT MPSMEIIA+ VKCTHGAT+ D+ EEELFY +RGI + A+ L++ FAD + + RLT K+ P + T G YQSI
Sbjct: 10 CAGRRLVFVDGVFEAALSDLADV--PAGVVAGSVAALSAEQLATALPALSFVPELGADNARLGHENKRTCQGSAPFGALNLAALQDAAVLLVPEGVDAGEKPFEVMFIASSEEAEAEGAPARLSSH-RLAVVAGAGARLALVQHACGLGSRHLANGLARVEVGAGAAVRHALLQEHPAAPGARQLETVCAEVGEDGRYEFSTVALGGGDARLNVQVELSGERAHCGLRGAAFGGQDQNLAMYTTIRHNAEATTTEQVQRNVLGKNTDVVWKGRIRVEEVAQQTDADQLCASLMLSDQARVTAMPSMEIIADQVKCTHGATVSDMSEEELFYFAARGIGRQMARELIVLGFADEAAEEINCEKFQARLTEKVQSILPPSESRTLGAIYQSI 396
BLAST of mRNA_P-littoralis_Contig182.45.2 vs. uniprot
Match: A0A7S2HD05_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2HD05_9EUKA) HSP 1 Score: 247 bits (630), Expect = 7.080e-68 Identity = 170/472 (36.02%), Postives = 242/472 (51.27%), Query Frame = 3
Query: 423 WFDAIRDGALPRPDTLVD-LSKAGEVELAELALPNRKQEPYRYTDLESLYRTDFTSGSESGGAAAAATAEAVKPYLLEACQ------GQQMVFVNGLFSEELSDVSALGGVEGLVVGHVGEMEGATLEQAKEMLSY-LPEKDADFRTTQGSLPFASLNQACFADAGVIMVADGVTVEKPIQVVFFS--------EGAEGPT------VSHPRLVVKAGADSKLTFTQNYLSQGGVCLANGFTRVLVGDRATVTHDYAEEMSASDRLVDTVSVDQHVNSTYSVNQVLSGAFDARANFQIDLLESGSHCNVFTAALTTKNQRQDVHSTIRHKAKGTTCLQEQRNVVSDTADCVFKGRIVIDQVAQKTDANQLCRTLLVSDKARVTVMPSMEIIANDVKCTHGATICDLEEEELFYLMSRGISKIQAKTLVIKSFADIVVKRFIDPDLRERLTAKLLEAAPRED-RATRGTYQSI 1769
WF D A P+ L++ L + L+ L P RK E +R DL SL + + A TA + LL +C G ++V V+G+ S ELSD+SAL G+ G + ++G + A L LPE +AD RT G FA+LNQA AD + V G+ VE+P+ VV S E E SHP +V+ + L+ Q Y +GG NG TRV +G A + H Y +E + VD+V VD Y + SG +R N Q++L G+H ++ L T NQ DVHS + H + T QEQRN V+ A VFKG +V+ Q + T ANQLCRTLL+SD AR+ + P++EI +DV+CTHGAT+ DL++E +FYL +RG+S++ A+ L+++ +A + + R+R K AP D R R SI
Sbjct: 69 WFQGAVDAASGDPEPLLEELRATAAMALSGLEFPRRKDEAWRRCDLTSLRASRIVTP--------AGTANVEQ--LLASCHSVEDSVGMRLVLVDGVCSPELSDLSAL--PAGMSAGSLCSVQGDAHDGALAALRQALPEAEADHRTALGVHTFAALNQASLADVISVHVPAGMQVEQPLHVVILSTAGASSGLEDGESAAPQRTLAASHPNIVLSLAEGASLSMLQQYGGEGGT-FTNGLTRVNLGTDAKLVHSYVQEQALESVHVDSVLVDVGERGLYESQLLQSGGRISRVNIQVNLERPGAHSSLKGLTLATGNQLADVHSRVVHASGDCTSQQEQRNAVAGAARVVFKGAVVVPQGSDNTTANQLCRTLLLSDDARIDMQPTLEIDTDDVQCTHGATVSDLDDEMIFYLQARGLSRLDARALLLEGWARSALDKVPSAGARQRAAVKAATLAPDSDIRVRRERLSSI 527
BLAST of mRNA_P-littoralis_Contig182.45.2 vs. uniprot
Match: A0A0M0J7I3_9EUKA (Assembly protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J7I3_9EUKA) HSP 1 Score: 232 bits (591), Expect = 2.020e-62 Identity = 164/471 (34.82%), Postives = 233/471 (49.47%), Query Frame = 3
Query: 423 WF-DAIRDGALPRPDTLVDLSKAGEVELAELALPNRKQEPYRYTDLESLYRTDFTSGSESGGAAAAATAEAVKPYLLEACQ-----GQQMVFVNGLFSEELSDVSALGGVEGLVVGHVGEMEGATLEQAKEMLSY-LPEKDAD----FRTTQGSLPFASLNQACFADAGVIMVADGVTVEKPIQVVFFSEGA-----------EGPT----VSHPRLVVKAGADSKLTFTQNYLSQGGVC--LANGFTRVLVGDRATVTHDYAEEMSASDRLVDTVSVDQHVNSTYSVNQVLSGAFDARANFQIDLLESGSHCNVFTAALTTKNQRQDVHSTIRHKAKGTTCLQEQRNVVSDTADCVFKGRIVIDQVAQKTDANQLCRTLLVSDKARVTVMPSMEIIANDVKCTHGATICDLEEEELFYLMSRGISKIQAKTLVIKSFADIVVKRFIDPDLRERLTAKLLEAAPREDRATR 1751
WF DA P L L A L + P RK EP+R DL SL + +AAAA L C G ++V V+G+ S+ LSD+SAL EG+ V + GA L+ A L LPE A+ T G FA+LNQA AD VI V GVT+E+P+ VV S G EG SHP L+V + L Q+Y + L NG TRV +G AT+ H Y +E D+V VD ++YS + SG AR N ++L + N+ ++ + Q DVHS + H + T QEQRNVV+ + V+KG +V+ + + T+A QLCRTLL+SD ARV V P++EI ++V+CTHGATI DL++E +FYL +RG+S+ A+ L++ + + +++R A+ + D+ R
Sbjct: 72 WFADAAATSPAPSSPMLAPLRAAAAAALPTIYFPGRKDEPFRRCDLSSLQASRLVPSVAKDASAAAA---------LAVCSDADSAGMRLVLVDGVCSQALSDLSAL--PEGVSVSSLNTTSGAALDGALAALQGPLPESGANTAAAMNTLLGVYGFAALNQASLADVCVINVPKGVTIERPLHVVLLSSGGVAAAPMQAPGTEGAAPVLPASHPNLLVSLAEGASLKLAQHYFACDAQAPYLCNGVTRVQLGRSATLQHSYVQEQGRMSIHFDSVLVDVGAGASYSSTMLQSGGRIARTNHLVELTGEKASSNLRALSMAAEAQLVDVHSKVVHVSGECTSQQEQRNVVAGRSRVVWKGAVVVPRGSDNTNAKQLCRTLLLSDDARVDVQPTLEIDTDEVECTHGATISDLDDEMVFYLQARGLSRPDARALLLSGWVRDALALVPSESVKQRAVARAAKVGADYDKEVR 531
BLAST of mRNA_P-littoralis_Contig182.45.2 vs. uniprot
Match: K8YSK7_NANGC (Assembly protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YSK7_NANGC) HSP 1 Score: 231 bits (589), Expect = 8.040e-62 Identity = 161/464 (34.70%), Postives = 233/464 (50.22%), Query Frame = 3
Query: 423 WFDAIRDGALPRPDTLVDLSKAGEVELA-ELALPNRKQEPYRYTDLESLY-RTDFTSGSESGGAAAAATAEAVKPYLLEACQGQQMVFVNGLFSEELSDVSAL---GGVEGLVVGHVGEMEGATLEQAKEMLSYLPEKDADFRTTQGSLPFASLNQACFADAGVIMVADGVTVEKPIQVVFFSE------GAEGPT---VSHPRLVVKAGADSKLTFTQNYLSQG-GVCLANGFTRVLVGDRATVTHDYAEEMSASDRLVDTVSVDQHVNSTYSVNQVLSGAFDARANFQIDLLESGSHCNVFTAALTTKNQRQDVHSTIRHKAKGTTCLQEQRNVVSDTADCVFKGRIVIDQVAQKTDANQLCRTLLVSDKARVTVMPSMEIIANDVKCTHGATICDLEEEELFYLMSRGISKIQAKTLVIKSFADIVVKRFIDPDLRERLTAKLLEAAPREDRATRGTYQSI 1769
WF+A+ P P + E LA E P R++E +R+TDL LY R + A A ++ + LE C+G+ +VFV+G+ ELS V+ L G EG G + E E+ + + PE GSLPF+ LNQAC DA ++V + + P+Q +F S GAEG VSHPRL V A S F Q+Y+ G G LAN T V V RA V H +A E+ + D VSV S Y V G R NFQ L + + +T + Q D+HS I H+ KG Q N+VS + CVFKGR+ ++ A+ A+QL R+++++D V MP++E+ + DV CTHGAT+ D++E E FYL SRGIS+ +A+ +++ FA V + +++RL +L + P A + Y S+
Sbjct: 109 WFNAVLADRDPHPAFGRATEEGVERFLAGETRAPTRREEAWRFTDLSRLYGRRPSKPPAVLQPAQVTALKAKIEEHTLEVCEGRVVVFVDGVHRPELSHVARLKEEGPKEGWRAGSIFEFSKEEQEELFREVEWAPEVGLRHTLASGSLPFSCLNQACVKDAACLVVDERGEMSAPVQFIFVSTSSQGEGGAEGEKDVRVSHPRLAVVARKRSAGKFVQSYIDIGSGTALANACTTVRVDRRAEVQHLHANELGPRGLMFDAVSVTTKKLSAYKNVFVNVGGELGRVNFQATLNGTEGRVDTEGVTITGEEQELDIHSYIHHRRKGGESNMYQCNIVSGDSHCVFKGRMKLEPRARGVTADQLIRSIMLTDSCTVDAMPTLEVCSGDVDCTHGATVADIDENEAFYLQSRGISRREARQVLMMGFAAQVYNQIPCEKMKKRLGERLYDVCPDVGIAKKYEYLSV 572
BLAST of mRNA_P-littoralis_Contig182.45.2 vs. uniprot
Match: A0A7S3RNJ1_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3RNJ1_9SPIT) HSP 1 Score: 226 bits (576), Expect = 3.500e-61 Identity = 161/472 (34.11%), Postives = 233/472 (49.36%), Query Frame = 3
Query: 396 AVPRRDPRV---WFDAIRDGALPRPDTLVDLSKAGEVELAELALPNRKQEPYRYTDLESLYRTDFTSGSESGGAAAAATAEAVKPYL-------LEACQGQQMVFVNGLFSEELSDVSAL------GGVEGLVVGHVGEMEGATLEQAKEMLSYLPEKDADFRTTQGSLPFASLNQACFADAGVIMVADGVTVEKPIQVVFFSEGAEG----PTVSHPRLVVKAGADSKLTFTQNYLSQGGVCLANGFTRVLVGDRATVTHDYAEEMSASDRLVDTVSVDQHVNSTYSVNQVLSGAFDARANFQIDLLESGSHCNVFTAALTTKNQRQDVHSTIRHKAKGTTCLQEQRNVVSDTADCVFKGRIVIDQVAQKTDANQLCRTLLVSDKARVTVMPSMEIIANDVKCTHGATICDLEEEELFYLMSRGISKIQAKTLVIKSFADIVVKRFIDPDLRERLTAKLLEAAPREDRATR 1751
A PR P W P + L + + LAE P RK E +R TDL SL+ AA A+ V L EA ++VFV+G+ ELS++ AL G + GL ++ A + +E LPE+ AD RT G F+ LNQA AD I + GV V PI+++ S G PT SHP +VV S++ Q Y G NG TR+ + A++ H Y +E S+ +D+V V + Y V SG AR N ++L + ++ +L Q D+HS +RH ++ QEQRN V+ A VF+G + + A T ANQLCR+LL+SD+ARV V P++EI+ +DV+CTHGAT+ DL++E +FYL SRG+S+ QA+ L++ +A V+ + R++ K E A E+ A R
Sbjct: 1 ATPRAPPAAADPWLTQALAVRRPAANGLASIREEASAALAEARRPGRKDEAWRRTDLSSLFAATLAPP------AAHPDAQFVAQMLDDNDNGTEEAQPSARLVFVDGVVDAELSELGALPAGAYAGPIAGLGAVASDDVVAAVIAAVRE----LPEQGADHRTELGCYTFSVLNQAALADVTCIYLPRGVKVTSPIRLLHLSSGGANTDALPT-SHPNVVVWMEEQSEMLLMQQYCGTGAY-FTNGLTRIRLDANASLAHAYVQEQSSEAVHIDSVLVRCDAGARYDTQVVQSGGRIARVNLGVELAGPHATTSISGISLANDGQLSDLHSAVRHASRDCVSGQEQRNAVAGRARVVFRGAVQVPLGADNTTANQLCRSLLLSDRARVDVSPNLEILTDDVQCTHGATVADLDDEMIFYLQSRGLSRAQARVLILAGWARSVMDKVPSAGAVRRVSTKAAELA--EEGAAR 458 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig182.45.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig182.45.2 >prot_P-littoralis_Contig182.45.2 ID=prot_P-littoralis_Contig182.45.2|Name=mRNA_P-littoralis_Contig182.45.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=570bp MLAVAAGLLSVAPTNSFLSAPLSSAVSGAAGSGSAAAAAASRTSTGESRLback to top mRNA from alignment at P-littoralis_Contig182:184448..195652+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig182.45.2 ID=mRNA_P-littoralis_Contig182.45.2|Name=mRNA_P-littoralis_Contig182.45.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=11205bp|location=Sequence derived from alignment at P-littoralis_Contig182:184448..195652+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig182:184448..195652+ >mRNA_P-littoralis_Contig182.45.2 ID=mRNA_P-littoralis_Contig182.45.2|Name=mRNA_P-littoralis_Contig182.45.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1710bp|location=Sequence derived from alignment at P-littoralis_Contig182:184448..195652+ (Pylaiella littoralis U1_48)back to top |