prot_P-littoralis_Contig182.26.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig182.26.1
Unique Nameprot_P-littoralis_Contig182.26.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length267
Homology
BLAST of mRNA_P-littoralis_Contig182.26.1 vs. uniprot
Match: D8LLZ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLZ3_ECTSI)

HSP 1 Score: 302 bits (773), Expect = 9.110e-101
Identity = 168/246 (68.29%), Postives = 184/246 (74.80%), Query Frame = 0
Query:   21 MAFQFKAASGQGRAPTHLNSKTSSEGVSRRSLLEKASVAAVAGALAWTGVADDASAGTARPSARNLAAASVELTGSSKQPIAVDVLYPKQWTVTKTPGKSINIQDMKYTDRAFSLAKPLPKGVKSVSDIPVTFFTDALFSLDGPYGTFGKVDDFKIVGTKSESRGKRDYRYVDLKFSAPTQGLLQVEKRACVASTIIGDDVVIFTASVLASRWQKISPVVAEMMESFRADVPQKTPDPSSFAFNRR 266
            MAFQ  A+S   RAPT + + ++SE VSRR+LLEKASVAAVAGA+A TGVA +ASAGTARPSARNLA  S+EL GS +QPIAV VLYPKQWTVTKT GKSINIQDMKYTDRAFSLA PLP G KSV DIP++FFTDALFSLDGPYGTFGKVDDFK++G KSE++GKRDYRYVDLKFSAPTQGLLQ                                       ESFRADV QKTPDPSSFAFNRR
Sbjct:   18 MAFQLMASSSSSRAPTQMKA-SASESVSRRALLEKASVAAVAGAVALTGVAGEASAGTARPSARNLAETSIELNGSGQQPIAVSVLYPKQWTVTKTAGKSINIQDMKYTDRAFSLAMPLPSGTKSVGDIPLSFFTDALFSLDGPYGTFGKVDDFKVIGAKSEAKGKRDYRYVDLKFSAPTQGLLQ---------------------------------------ESFRADVAQKTPDPSSFAFNRR 223          
BLAST of mRNA_P-littoralis_Contig182.26.1 vs. uniprot
Match: A0A7S0LSG3_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LSG3_9EUKA)

HSP 1 Score: 92.0 bits (227), Expect = 2.010e-18
Identity = 53/151 (35.10%), Postives = 87/151 (57.62%), Query Frame = 0
Query:  103 VDVLYPKQWTVTKTPGKSINIQDMKYTDRAFSLAKPLPKGVKSVSDIPVTFFTDALFSLDGPYGTFGKVDDFKIVGTKSE-----SRGKRDYRYVDLKFSAPTQGLLQVEKRACVASTIIGDDVVIFTASVLASRWQKISPVVAEMMESFR 248
            V   +P  WT+    G +I+++D++ +D AF L+  LP+G K+   +  +FF   +F   G YG++G VDD K++ +        S GK+ YR + LKFS  T     VE+RA ++ + +G  V I  A  LA+R++K+ P +A + +SFR
Sbjct:  114 VSFAFPPAWTLAG--GPNIDVRDVRESDSAFLLSAKLPEG-KTFEQLHDSFFLSVVFDPQGKYGSYGTVDDRKVLSSDLAALTLPSGGKQTYRRLALKFSPLTYNGNTVERRALLSCSSVGGSVFILVAGSLATRYKKVQPELASIQDSFR 261          
BLAST of mRNA_P-littoralis_Contig182.26.1 vs. uniprot
Match: A0A7S4K715_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K715_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 2.230e-10
Identity = 44/151 (29.14%), Postives = 77/151 (50.99%), Query Frame = 0
Query:  105 VLYPKQWTVTKTPGKSINIQDMKYTDRAFSLAKPLPKGVKSVSDIPVTFFTDALFSLDGPYGTFGKVDDFKIVGTKSESRGKRDYRYVDLKFSAPTQGLLQVEKRACVASTIIGDDVVIFTASVLASRWQKISPVVAEMMESFRADVPQKT 255
            V +   W + ++   S+  +D+   + AF     LPKG K  SD+P +FF DA+F   G +G +G   D KI  T S S       Y+   F+  T  + + E++A ++++++GD V +      A+R++K+   + ++ ESF      KT
Sbjct:  135 VTFNAPWPMLRS-SISVESRDLANPETAFVQVAKLPKG-KGASDLPKSFFEDAIFGQKGKFGAYGAPSDIKIKKTDSGSASGSSL-YMG-SFTTLTPAMRESERQAFISASVVGDGVFMLVTGSTATRFRKLEKDLRKVAESFSVVAAPKT 281          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig182.26.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LLZ3_ECTSI9.110e-10168.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S0LSG3_9EUKA2.010e-1835.10Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A7S4K715_9STRA2.230e-1029.14Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.1000.10Mog1/PsbP, alpha/beta/alpha sandwichcoord: 102..249
e-value: 2.0E-8
score: 36.5
IPR006311Twin-arginine translocation pathway, signal sequencePROSITEPS51318TATcoord: 1..76
score: 7.811721

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig182contigP-littoralis_Contig182:116070..123178 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig182.26.1mRNA_P-littoralis_Contig182.26.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig182 115988..123815 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig182.26.1 ID=prot_P-littoralis_Contig182.26.1|Name=mRNA_P-littoralis_Contig182.26.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=267bp
MTKLFLSWLLLASTAMSSTTMAFQFKAASGQGRAPTHLNSKTSSEGVSRR
SLLEKASVAAVAGALAWTGVADDASAGTARPSARNLAAASVELTGSSKQP
IAVDVLYPKQWTVTKTPGKSINIQDMKYTDRAFSLAKPLPKGVKSVSDIP
VTFFTDALFSLDGPYGTFGKVDDFKIVGTKSESRGKRDYRYVDLKFSAPT
QGLLQVEKRACVASTIIGDDVVIFTASVLASRWQKISPVVAEMMESFRAD
VPQKTPDPSSFAFNRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006311TAT_signal