prot_P-littoralis_Contig180.64.6 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig180.64.6
Unique Nameprot_P-littoralis_Contig180.64.6
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length1277
Homology
BLAST of mRNA_P-littoralis_Contig180.64.6 vs. uniprot
Match: D8LKW2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKW2_ECTSI)

HSP 1 Score: 699 bits (1803), Expect = 1.990e-225
Identity = 552/1185 (46.58%), Postives = 639/1185 (53.92%), Query Frame = 0
Query:    3 DPTLAAVLRFARSDGDATVRCSAFDSIAEYIGQMEMLSFDNH---GDDCSSERDNYVPSDVAVCERSNIPTEEAGYKGSSSSGGDNSSVNLETGMGA-----MDIAPCNDSTPDHAGGETLVSAGKSR--ATPARPPAPSRRQVIVGRASRRQRGDGERPTTTTQGTSDRPSQREKGEGRA--------------IGPWSVGGALLSSLSASADALSTDGSKAVRAKALACSLRILEVHGNTAVRSGGSFDGTTG----VVEVPADSDCVAKTLCVVAKSGWGALEALAADSGGAA--QASPGSVGGG-RNRKAADAARDLLTLPCVNAVPIELVMCYERCRVAPGAGEGAAAAAEEAKRAVRQVTQARFCGDIGTLLRAVSDVMAADERR-GRGSGDPNESAAGTNECASFSLSEVLCEVLAGVDGKVIAPLLRQALQAYAAHAAGDDVVQRHRKHELAVSAPVLLRTLALLAEANGNTKHAGEEKQSS-----GSNRA-------------DEEQIQILAGSQRLFWRSLERRMEDIERDS-DEQAGFGAVHNCAPDAGLQESLVPCSSVGGGSXXXXXXXGRRDQRAMTVSDAVLELSELLHIYQLLATRSLISPENSLALEVLVYPAALTKRRLIRPAVALALALDEPHRVLLSSLAILQDAAFSRSSTDVGRACDYVRLIGVLATENASLIAAHVREQHEDAKDKKTRRNSRQEEEEGHAEDGREDYMAGVSNREAMEWDIRRLREASVTCDGMLSCYTPFLLAIVRGRIADSAAAKEQSRRQEGMLEESSFPPGGTATGINSCSGNGATRDGDESSSIDGGGDGXXXXXXXXXXXXXXXXXXXPKNAAGQVDEGNGGANIVRDEGCNLPGVVVPXXXXXXXXXXXXXSLP-SSCPGALCAEALRALSEYAVLSPGLVAAEVLPLAEELAMDTLEDAQIRSAAVGVLTRRELATDETAAHVCRLLKDENPRIRREVLGRLGHLMKESRIQTVHLSRLALLLVDGCEKVCRTARQVFFDYLQPRPDEVNRCVFETYFTLDAEEPANRNILQNLVAVAREAAPGQGLEPLGGALVRKAAETGSSEAAFFLSLVPPTVNSLEAAEVALRRGQLAQAPAETVSLVAAHFSKGAQRRGSGIPSAGSSSSAWGRGDGSAPSKAQALEMAARIGSLNSRRRAAGRPS 1135
            DP LAAVLR +RSDGDATVR SAFDS+A++IG++E   +       DD SS+ D+  PS   +  +    T E      S+  G      +  G  A     M+IAP  D   +HAG        + R  AT   P A ++   + G  S RQ G+G+ P T+ Q T+    +  +  G A               GPW+VGGAL SSLSA+A+AL TDGSKAVRAKALAC LRILEVHG T    G S + TTG        P  S  V   L  VAK    ALE LA D+ G    QAS  S GGG R+RKAAD AR LL LPC+ + P++LVMCY RCRVAPG GEG A  A EAKRA+R++ QA FC DI  L +AVS +MAADERR G   G  N   A T E ASF LSEVLCEVLAGVD   IA LL  AL+AYAA    D++  R R    A SAPVLLRTLALLAEA G+ K+  +E+  +      SNR              +EEQ++ LAGSQ LFWR LE+RMEDIERD   E+ G   V         +   V      GG XXXXXX           SD + ELSELL ++QLLATRSL+SPEN  ALE LV+PAAL++RR                                        ACDYVRLIGVLA ENAS IAAH+REQ+        R  SR  EEE  AE+G +DYMAGVSNREAM                                   +  A+E                         C G      GD    +                          +    Q D G   A + R++     G                 SLP SSCP ALC EAL ALSEYAVLS GL AAEVLPLAE LA DTLE  Q+R+AAVGVLTRRELATDE AAH C LL+DENP +RREVL RLG L+KES                                         RC+FETYFTLDAEE   R +LQ LVAVAREAAPGQGLE LG ALVRK AE G SEAAFFLSLVPPTVNS EAAEVA RRGQLAQ+P  T+SLVAAHFS+GAQR G+G   A ++S A GRG G+  SKAQALEMAARIGSL SR  +A R S
Sbjct:  253 DPALAAVLRLSRSDGDATVRSSAFDSVAKFIGEVESTLYRQRLDDDDDTSSDLDDGTPSGDVLAHQQPRNTAETLTDDDSTGSGAGGGRGVTHGARATETMEMEIAPRGDGAANHAGDADACPLSEKRPSATARTPAACTQMGAMHGATSGRQSGEGDTPVTSRQHTTGHAHRETREAGAASEGNRGQRRKAKVSAGPWAVGGALQSSLSAAAEALLTDGSKAVRAKALACLLRILEVHGGTIKPRGASCENTTGDKAGSAAAPGVSSRVETILSAVAKGALAALEPLAGDNTGGPTIQASLNSTGGGGRHRKAADTARALLVLPCIESSPVDLVMCYARCRVAPGVGEGEAVGATEAKRALREIAQATFCADIRKLWKAVSVIMAADERRQGLEDGSANIDFADTTEGASFPLSEVLCEVLAGVDSGAIASLLCDALEAYAAE---DEIAPRDRDGA-AASAPVLLRTLALLAEATGHAKNGVDERNGARQPGGSSNRERLAGRSGQHGAGDEEEQLRTLAGSQGLFWRRLEQRMEDIERDKRGEETGGRGVEGDRGQLRRRGVGVSVEQYHGGXXXXXXXRS-------AASDTISELSELLRMFQLLATRSLLSPENGAALEALVFPAALSRRR----------------------------------------ACDYVRLIGVLARENASFIAAHIREQYS------ARCLSRPGEEES-AENGEDDYMAGVSNREAM---------------------------------GAATTAEEGEXXXXXXXXXXXXXXXXXXXXDGDCGGARVGSRGDAQDEM--------------------------QYRMAQQDGGKVEATVFREDVGQDRGATA----------AAGVSLPASSCPRALCTEALWALSEYAVLSAGLAAAEVLPLAERLASDTLEHPQVRNAAVGVLTRRELATDEIAAHACSLLEDENPCLRREVLVRLGQLIKES-----------------------------------------RCLFETYFTLDAEEAVKRKVLQRLVAVAREAAPGQGLESLGSALVRKVAEAGDSEAAFFLSLVPPTVNSFEAAEVAHRRGQLAQSPHGTISLVAAHFSRGAQR-GAGSSLATTASIA-GRGGGAPLSKAQALEMAARIGSLTSRVASASRSS 1267          
BLAST of mRNA_P-littoralis_Contig180.64.6 vs. uniprot
Match: A0A6H5KWW9_9PHAE (Cnd1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWW9_9PHAE)

HSP 1 Score: 389 bits (1000), Expect = 1.450e-118
Identity = 265/468 (56.62%), Postives = 300/468 (64.10%), Query Frame = 0
Query:  710 MLSCYTPFLLAIVRGRIADSAAAKEQSRRQEGML--EESSFPPGGTATGINSCSGNGATRDGD-ESSSIDGGGDGXXXXXXXXXXXXXXXXXXXPKNAAGQVDEGNGGANIVRDEGCNLPGVVVPXXXXXXXXXXXXXSLP-SSCPGALCAEALRALSEYAVLSPGLVAAEVLPLAEELAMDTLEDAQIRSAAVGVLTRRELATDETAAHVCRLLKDENPRIRREVLGRLGHLMKESRIQTVHLSRLALLLVDGCEKVCRTARQVFFDYLQPRPDEVNRCVFETYFTLDAEEPANRNILQNLVAVAREAAPGQGLEPLGGALVRKAAETGSSEAAFFLSLVPPTVNSLEAAEVALRRGQLAQAPAETVSLVAAHFSKGAQRRGSGIPSAGSSSSAWGRGDGSAPSKAQALEMAARIGSLNSRRRAAG------RPSTFLRAAAEGKKTTPAARPRRGKKAEHVGVQSG 1167
            MLSCYTPFLLAIVR R+AD+AAA+  +  +      E                +  G   DGD + + +  GGD                          Q D G   A   R +G    G                 SLP SSCP ALC EALRALSEYAVLS GL AAEVLPLAE LA DTLE  Q+R+AAVGVLTRRELATDE AAH C LL+DENP +RREVL RLG LMKESRI+T HLSR ALLLVD  E V + A++VF D+LQPRPD V RC+FET+FTLDAEE   R +LQ LVAVAREAAPGQGLE LGGALVRKAAETG SEAAFFLSLVPPTVNS EAAEVALRRGQLAQ+P  T+ LVA HFS+GAQR G+G   A ++S A GRG G+  SKAQALEMAA+IGSL SR  +A       + +  +   A    T PAARPRRGKK +      G
Sbjct:    1 MLSCYTPFLLAIVRRRVADTAAARNVTAEKGAATKAEXXXXXXXXXXXXXXXXASAGGAADGDCDEARVGSGGDAHDETRLHVV----------------QQDGGKVEATDFRKDGGQGRGATT----------AASVSLPASSCPRALCTEALRALSEYAVLSAGLAAAEVLPLAEGLASDTLEHPQVRNAAVGVLTRRELATDEIAAHACSLLEDENPCVRREVLVRLGQLMKESRIKTGHLSRFALLLVDVSEGVRQAAQKVFIDHLQPRPDTVCRCLFETFFTLDAEEAVKRKVLQRLVAVAREAAPGQGLESLGGALVRKAAETGDSEAAFFLSLVPPTVNSFEAAEVALRRGQLAQSPHATIFLVATHFSRGAQR-GAGSSLAITASVA-GRGGGAPLSKAQALEMAAQIGSLASRGASASIFSRRAKVAAAIATGAAAMNTVPAARPRRGKKTDQAAATQG 440          
BLAST of mRNA_P-littoralis_Contig180.64.6 vs. uniprot
Match: A0A6H5L3C3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3C3_9PHAE)

HSP 1 Score: 361 bits (927), Expect = 2.840e-105
Identity = 321/779 (41.21%), Postives = 384/779 (49.29%), Query Frame = 0
Query:    3 DPTLAAVLRFARSDGDATVRCSAFDSIAEYIGQMEMLSFDNH---GDDCSSERDNYVPSDVAVCERSNIPTEEAGYKGSSSSGGDNSSVNLETGMGA-----MDIAPCNDSTPDHAGGETLVSAGKS--RATPARPPAPSRRQVIVGRASRRQRGDGERPTTTTQGTSDR----------PSQREKGEGR----AIGPWSVGGALLSSLSASADALSTDGSKAVRAKALACSLRILEVHGNTAVRSGGSFDGTTG----VVEVPADSDCVAKTL----------------------------------CV----------------------------------------------------VAKSGWGALEALAADS--GGAAQASPGSVGGG-RNRKAADAARDLLTLPCVNAVPIELVMCYERCRVAPGAGEGAAAAAEEAKRAVRQVTQARFCGDIGTLLRAVSDVMAADERR-GRGSGDPNESAAGTNECASFSLSEVLCEVLAGVDGKVIAPLLRQALQAYAAHAAGDDVVQRHRKHELAVSAPVLLRTLALLAEANGNTKHAGEEKQSSGSNRADEEQIQILAGSQRLFWRSLERRMEDIERDSD-EQAGFGAVHNCAPDAGLQESLVPCSSVGGGSXXXXXXXGRRDQRAMTVSDAVLELSELLHIYQLLATRSLISPENSLALEVLVYPAALTKRRLIRPAVALALALDEPHRVLLSSLAILQDAAFSRSSTDVGRACDYVRLIGVLATENASLIAAHVREQHEDAKDKK 662
            DP LAA+LR ARSDGDATVR SAFDSIA++IGQM    +       DD SS+ D+  PS   +  + +  T EA                +  G  A     M+IAP      DHAG        +    AT   P A ++   + G  S RQ   G  P  + Q TSDR          PS+  +G+ R    + GPW++GGAL SSLSA+A+AL TDGSKAVRAKALACSL ILEVHG+T    G   + T G        P  S  V +TL                                  C+                                                    VAK    ALEALA D+  G   QAS  S GGG R+RKAAD AR LL LPCV   P+ELVMCY RCRVA G GEG A  A EAKRA+R++ QA F  DI  LL+AVS +MAADERR G   G  N + A T E ASFSLSEVL EVLAGVD   IA LL  AL+AYAA    D++  R R                            GE ++ S  N  +EEQ++ LAGSQ LFWR LE+RMEDIERD   E++G+            +   +      GG  XXXXXX           DAV ELSELL I+QLLAT SL+S +NS ALE LV+PAAL++RRLI                +  S+ I    AF        RACDYVRLIGVLA ENAS IAAHVREQ+   K+++
Sbjct:   53 DPALAALLRLARSDGDATVRSSAFDSIAKFIGQMGTTLYRQRLHDNDDTSSDLDDGTPSGDVLAHQQSRSTAEALTDXXXXXXXXXXXRGVTHGARATETMDMEIAPSERGAADHAGDADACPLSEKIPSATARTPMARTQMGAMHGATSGRQSRQGRTPVISPQHTSDRAHRATRGAGAPSEGNRGQRREAKVSAGPWTMGGALQSSLSAAAEALLTDGSKAVRAKALACSLLILEVHGDTIQPRGACCENTAGDEAGSAAGPGVSSRVERTLSTASSRCGGILILMAFLRSQRRLPRSSVDFASRPCMSGIAILCPSLRKRDLRQRCFPYTRGSFTWVHLSKSLVVQEPFLPLSTLCRVQVAKGALLALEALAGDNHGGSTTQASLNSTGGGGRHRKAADTARALLILPCVEPSPVELVMCYARCRVASGVGEGEAVGATEAKRALREIAQATFSADIRKLLKAVSVIMAADERRQGLEDGSANINFADTTEGASFSLSEVLGEVLAGVDSGAIASLLCDALEAYAAE---DEIAPRDRD---------------------------GETRKYSNYNSDEEEQLRTLAGSQGLFWRRLEQRMEDIERDERREESGWQGAQGDRGQLRRRGLGLSIEQYHGGGGXXXXXXXXXHGHRSAAPDAVSELSELLRIFQLLATYSLLSAKNSAALEALVFPAALSRRRLI----------------VSRSIDIHNSFAFLVLVWG-SRACDYVRLIGVLARENASFIAAHVREQYRCEKERR 784          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig180.64.6 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LKW2_ECTSI1.990e-22546.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KWW9_9PHAE1.450e-11856.62Cnd1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5L3C3_9PHAE2.840e-10541.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 652..672
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1233..1256
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 518..539
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1090..1104
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 651..685
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 71..175
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 448..468
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1180..1200
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1086..1276
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1260..1276
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 751..780
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 732..843
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 520..539
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 72..92
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 843..976
e-value: 6.7E-6
score: 27.7
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 856..981

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig180contigP-littoralis_Contig180:224975..235118 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig180.64.6mRNA_P-littoralis_Contig180.64.6Pylaiella littoralis U1_48mRNAP-littoralis_Contig180 224222..238051 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig180.64.6 ID=prot_P-littoralis_Contig180.64.6|Name=mRNA_P-littoralis_Contig180.64.6|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1277bp
MTDPTLAAVLRFARSDGDATVRCSAFDSIAEYIGQMEMLSFDNHGDDCSS
ERDNYVPSDVAVCERSNIPTEEAGYKGSSSSGGDNSSVNLETGMGAMDIA
PCNDSTPDHAGGETLVSAGKSRATPARPPAPSRRQVIVGRASRRQRGDGE
RPTTTTQGTSDRPSQREKGEGRAIGPWSVGGALLSSLSASADALSTDGSK
AVRAKALACSLRILEVHGNTAVRSGGSFDGTTGVVEVPADSDCVAKTLCV
VAKSGWGALEALAADSGGAAQASPGSVGGGRNRKAADAARDLLTLPCVNA
VPIELVMCYERCRVAPGAGEGAAAAAEEAKRAVRQVTQARFCGDIGTLLR
AVSDVMAADERRGRGSGDPNESAAGTNECASFSLSEVLCEVLAGVDGKVI
APLLRQALQAYAAHAAGDDVVQRHRKHELAVSAPVLLRTLALLAEANGNT
KHAGEEKQSSGSNRADEEQIQILAGSQRLFWRSLERRMEDIERDSDEQAG
FGAVHNCAPDAGLQESLVPCSSVGGGSGGSGSGSGRRDQRAMTVSDAVLE
LSELLHIYQLLATRSLISPENSLALEVLVYPAALTKRRLIRPAVALALAL
DEPHRVLLSSLAILQDAAFSRSSTDVGRACDYVRLIGVLATENASLIAAH
VREQHEDAKDKKTRRNSRQEEEEGHAEDGREDYMAGVSNREAMEWDIRRL
REASVTCDGMLSCYTPFLLAIVRGRIADSAAAKEQSRRQEGMLEESSFPP
GGTATGINSCSGNGATRDGDESSSIDGGGDGNSGDSGGGGFSGNGNDDGG
PKNAAGQVDEGNGGANIVRDEGCNLPGVVVPPPGLSSSSSSSSSSLPSSC
PGALCAEALRALSEYAVLSPGLVAAEVLPLAEELAMDTLEDAQIRSAAVG
VLTRRELATDETAAHVCRLLKDENPRIRREVLGRLGHLMKESRIQTVHLS
RLALLLVDGCEKVCRTARQVFFDYLQPRPDEVNRCVFETYFTLDAEEPAN
RNILQNLVAVAREAAPGQGLEPLGGALVRKAAETGSSEAAFFLSLVPPTV
NSLEAAEVALRRGQLAQAPAETVSLVAAHFSKGAQRRGSGIPSAGSSSSA
WGRGDGSAPSKAQALEMAARIGSLNSRRRAAGRPSTFLRAAAEGKKTTPA
ARPRRGKKAEHVGVQSGGGGGGGGAEHRLTAAGDSREGSRDGRRLETHEV
TPKQSGSLGLRKRRRARDASKSRGGDGGSSGGGALRTTGSVNENTRQRTS
GTTVSVEKGEEEGEGEEEEEEEEWEG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR016024ARM-type_fold