prot_P-littoralis_Contig177.56.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig177.56.1
Unique Nameprot_P-littoralis_Contig177.56.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length516
Homology
BLAST of mRNA_P-littoralis_Contig177.56.1 vs. uniprot
Match: D7FN78_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN78_ECTSI)

HSP 1 Score: 211 bits (537), Expect = 5.680e-59
Identity = 225/453 (49.67%), Postives = 267/453 (58.94%), Query Frame = 0
Query:   57 AASPALSFEELARILAEEWERLPEEQKTPYRNKADEERLRHETMGAAIALTQIGTPSLRSGPSTPAAI-GQKARRCLDIGTPDWQSPRIQPQRV----AGNYDFGYNDSTATVDDGDFAPGL------GEIIPADQASLGADCSNITDMMSSYSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADEVGPAVGGGDARHRVMASPGFAAASSAVXXXXTSGDGRGGDAGVAPAPATPGSGGDKSYGAG-SVRAVGFEIRAADGGGSASKRDGDIIRSRKPHTTRAPRGRPRKGAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAQNDSRSQERFRKAEYQAGRELVSKMSKKDAARPKGPQSSYILFYKEKVASFKAAKPGMSTTELGAAVGEAWRGLSDEQRLPYTQRAKASRERYKGQLCTIARNAVAAA 497
            AASP +SFEELARILAEEW+ +PEE KTPYR +ADEE LRHETM AA+ALTQIGTPS  SGP+TP    G+KARRCLDIGTP+WQSPR+ PQ V     G+   G+  + A +   D   GL                           +  +S XX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                    P                      AG     ATP + GD    AG  +  VG  +  A G  +A  +DG   +S +  +  A +G   K +  XXXXXXXXXXXXXXXXXXXX                             +ER RKAEY+AGRELVSKMS+KD+ARPKGPQSSYI+FY EK+ASFKAA+PGMS T++  AVGEAWR LSDE +LPYT++A+A R+RY+ QL  IAR+A  +A
Sbjct:   26 AASPVVSFEELARILAEEWDSMPEEAKTPYRQRADEEHLRHETMSAALALTQIGTPSFPSGPTTPVLPPGKKARRCLDIGTPNWQSPRLPPQDVWDSPLGHGGCGFVPNLAGLPAADDPAGLLSEGGAAXXXXXXXXXXXXXXXXXXXRLPPWSXXXFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP----------------------AGGGAVEATPENVGDGHRNAGWPMGLVGLTVHPAAGTVAAVDKDGGC-QSPETISRTALQGEASKKSAXXXXXXXXXXXXXXXXXXXXXSPWSISKKLL-------------------EERARKAEYKAGRELVSKMSRKDSARPKGPQSSYIVFYTEKMASFKAARPGMSITDIATAVGEAWRRLSDEMKLPYTKKAEADRKRYEDQLRAIARSAATSA 436          
BLAST of mRNA_P-littoralis_Contig177.56.1 vs. uniprot
Match: UPI001D03C8B7 (Non-histone chromosomal protein 6 n=1 Tax=Bacidia gigantensis TaxID=2732470 RepID=UPI001D03C8B7)

HSP 1 Score: 60.1 bits (144), Expect = 1.670e-7
Identity = 29/70 (41.43%), Postives = 43/70 (61.43%), Query Frame = 0
Query:  416 KKDAARPKGPQSSYILFYKEKVASFKAAKPGMSTTELGAAVGEAWRGLSDEQRLPYTQRAKASRERYKGQ 485
            KKD   PK   S+Y+ F  E   S +   PG+S  ++G  +GE W+ LSD+QR+PY  +AKA + RY+ +
Sbjct:   19 KKDPNAPKRGLSAYMFFANENRDSVREENPGISFGQVGKVLGERWKALSDKQRVPYEDKAKADKARYENE 88          
BLAST of mRNA_P-littoralis_Contig177.56.1 vs. uniprot
Match: A0A642V6Q8_9ASCO (HMG box domain-containing protein n=1 Tax=Trichomonascus ciferrii TaxID=44093 RepID=A0A642V6Q8_9ASCO)

HSP 1 Score: 58.5 bits (140), Expect = 4.080e-7
Identity = 27/75 (36.00%), Postives = 46/75 (61.33%), Query Frame = 0
Query:  416 KKDAARPKGPQSSYILFYKEKVASFKAAKPGMSTTELGAAVGEAWRGLSDEQRLPYTQRAKASRERYKGQLCTIA 490
            KKD   PK   S+Y+ F  E+  + ++  PG+S  ++G  +GE W+ L+DE++ PY  +AKA ++RY+ +    A
Sbjct:   20 KKDPNAPKRSLSAYMFFANEQRDTVRSENPGISFGQVGRVLGERWKALTDEEKRPYEDKAKADKQRYEDEKAAYA 94          
BLAST of mRNA_P-littoralis_Contig177.56.1 vs. uniprot
Match: A0A814GAJ6_9BILA (Hypothetical protein n=4 Tax=Bdelloidea TaxID=44578 RepID=A0A814GAJ6_9BILA)

HSP 1 Score: 57.8 bits (138), Expect = 6.210e-7
Identity = 25/72 (34.72%), Postives = 44/72 (61.11%), Query Frame = 0
Query:  415 SKKDAARPKGPQSSYILFYKEKVASFKAAKPGMSTTELGAAVGEAWRGLSDEQRLPYTQRAKASRERYKGQL 486
            S+KD   PK P S++ LF +++    K   P +S +++   +GE WRG+ DE++  Y +RA+  +ERY  ++
Sbjct:   16 SQKDPNAPKRPLSTFFLFSQDERPKIKKDNPSLSVSDIAKVIGERWRGIGDEKKRHYEERARQEKERYDREI 87          
BLAST of mRNA_P-littoralis_Contig177.56.1 vs. uniprot
Match: A0A8H7BXE0_9FUNG (Non-histone chromosomal protein 6 n=1 Tax=Apophysomyces ossiformis TaxID=679940 RepID=A0A8H7BXE0_9FUNG)

HSP 1 Score: 57.0 bits (136), Expect = 1.690e-6
Identity = 25/74 (33.78%), Postives = 46/74 (62.16%), Query Frame = 0
Query:  416 KKDAARPKGPQSSYILFYKEKVASFKAAKPGMSTTELGAAVGEAWRGLSDEQRLPYTQRAKASRERYKGQLCTI 489
            KK++  PK   S+Y+ F +EK    K   P  +  ++G  +GE W+G++DEQ+ PY ++A+A ++RY+ +   +
Sbjct:   24 KKESGGPKRGLSAYMFFSQEKRQEVKDENPEATFGQIGKILGEKWKGMTDEQKKPYVEKAEADKKRYEDEKAAV 97          
BLAST of mRNA_P-littoralis_Contig177.56.1 vs. uniprot
Match: A0A5E8C588_9ASCO (HMG box domain-containing protein n=1 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8C588_9ASCO)

HSP 1 Score: 58.2 bits (139), Expect = 1.920e-6
Identity = 25/76 (32.89%), Postives = 46/76 (60.53%), Query Frame = 0
Query:  411 VSKMSKKDAARPKGPQSSYILFYKEKVASFKAAKPGMSTTELGAAVGEAWRGLSDEQRLPYTQRAKASRERYKGQL 486
              K  KKD   PK   S+Y+ F  EK    +   PG+S  ++G  +GE W+ LS+E+++P+ ++A+  ++RY+ ++
Sbjct:   66 TKKGKKKDPNAPKRSLSAYMFFANEKRDEVRNENPGISFGQIGKVLGEKWKALSEEEKIPFVEKAETDKKRYEAEM 141          
BLAST of mRNA_P-littoralis_Contig177.56.1 vs. uniprot
Match: NHP6_CANAL (Non-histone chromosomal protein 6 n=6 Tax=Candida/Lodderomyces clade TaxID=1535325 RepID=NHP6_CANAL)

HSP 1 Score: 56.2 bits (134), Expect = 2.050e-6
Identity = 29/85 (34.12%), Postives = 46/85 (54.12%), Query Frame = 0
Query:  407 GRELVSKMSKKDAARPKGPQSSYILFYKEKVASFKAAKPGMSTTELGAAVGEAWRGLSDEQRLPYTQRAKASRERYKGQLCTIAR 491
            G    S   KKD   PK   S+Y+ F  E     +A  PG+S  ++G  +GE W+ L+ E +LPY  +A+A ++RY+ +    A+
Sbjct:    4 GERKKSSRKKKDPDAPKRSLSAYMFFANENRDIVRAENPGISFGQVGKLLGEKWKALNSEDKLPYENKAEADKKRYEKEKAEYAK 88          
BLAST of mRNA_P-littoralis_Contig177.56.1 vs. uniprot
Match: A0A1E4S497_CYBJN (Non-histone chromosomal protein 6 n=1 Tax=Cyberlindnera jadinii (strain ATCC 18201 / CBS 1600 / BCRC 20928 / JCM 3617 / NBRC 0987 / NRRL Y-1542) TaxID=983966 RepID=A0A1E4S497_CYBJN)

HSP 1 Score: 55.8 bits (133), Expect = 2.880e-6
Identity = 29/78 (37.18%), Postives = 46/78 (58.97%), Query Frame = 0
Query:  406 AGRELVSKMSKKDAARPKGPQSSYILFYKEKVASFKAAKPGMSTTELGAAVGEAWRGLSDEQRLPYTQRAKASRERYK 483
            A R+L +   KKD   PK   S+Y+ F  E     +A  PG+S   +G  +GE W+ L+ E ++PY Q+A+A ++RY+
Sbjct:    4 AQRKLKTSRKKKDPNAPKRSLSAYMFFANENRDIVRAENPGISFGGVGKLLGEKWKALTPEGKVPYEQKAEADKKRYE 81          
BLAST of mRNA_P-littoralis_Contig177.56.1 vs. uniprot
Match: NHP6_YARLI (Non-histone chromosomal protein 6 n=4 Tax=Yarrowia TaxID=4951 RepID=NHP6_YARLI)

HSP 1 Score: 55.5 bits (132), Expect = 5.050e-6
Identity = 26/78 (33.33%), Postives = 47/78 (60.26%), Query Frame = 0
Query:  416 KKDAARPKGPQSSYILFYKEKVASFKAAKPGMSTTELGAAVGEAWRGLSDEQRLPYTQRAKASRERYKGQLCTIARNA 493
            KKD   PK   S+Y+ F  +   + +A  PG++  ++G A+GE W+ L+D +++PY ++A A ++RY+ +      NA
Sbjct:   19 KKDPNAPKRALSAYMFFANDNRDAIRADNPGIAFGQVGKALGEKWKTLTDAEKVPYEEKATADKKRYEDEKAAYKANA 96          
BLAST of mRNA_P-littoralis_Contig177.56.1 vs. uniprot
Match: A0A0B7N4V9_9FUNG (HMG box domain-containing protein n=1 Tax=Parasitella parasitica TaxID=35722 RepID=A0A0B7N4V9_9FUNG)

HSP 1 Score: 55.1 bits (131), Expect = 5.240e-6
Identity = 30/78 (38.46%), Postives = 48/78 (61.54%), Query Frame = 0
Query:  408 RELVSKMSK--KDAARPKGPQSSYILFYKEKVASFKAAKPGMSTTELGAAVGEAWRGLSDEQRLPYTQRAKASRERYK 483
            +E VSK SK  K+   PK   S+Y+ F ++  A  K   P  S   +G  +GE W+GLSD+++ PY ++A+A ++RY+
Sbjct:    7 KEKVSKSSKEKKNPNAPKRGLSAYMFFSQDNRAKVKEDNPEASFGTIGKLLGEKWKGLSDQEKKPYLEKAEADKKRYE 84          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig177.56.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
D7FN78_ECTSI5.680e-5949.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
UPI001D03C8B71.670e-741.43Non-histone chromosomal protein 6 n=1 Tax=Bacidia ... [more]
A0A642V6Q8_9ASCO4.080e-736.00HMG box domain-containing protein n=1 Tax=Trichomo... [more]
A0A814GAJ6_9BILA6.210e-734.72Hypothetical protein n=4 Tax=Bdelloidea TaxID=4457... [more]
A0A8H7BXE0_9FUNG1.690e-633.78Non-histone chromosomal protein 6 n=1 Tax=Apophyso... [more]
A0A5E8C588_9ASCO1.920e-632.89HMG box domain-containing protein n=1 Tax=Saprocha... [more]
NHP6_CANAL2.050e-634.12Non-histone chromosomal protein 6 n=6 Tax=Candida/... [more]
A0A1E4S497_CYBJN2.880e-637.18Non-histone chromosomal protein 6 n=1 Tax=Cyberlin... [more]
NHP6_YARLI5.050e-633.33Non-histone chromosomal protein 6 n=4 Tax=Yarrowia... [more]
A0A0B7N4V9_9FUNG5.240e-638.46HMG box domain-containing protein n=1 Tax=Parasite... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009071High mobility group box domainSMARTSM00398hmgende2coord: 36..105
e-value: 1.8E-7
score: 40.9
coord: 421..491
e-value: 8.7E-17
score: 71.8
IPR009071High mobility group box domainPFAMPF00505HMG_boxcoord: 422..483
e-value: 1.6E-15
score: 57.2
coord: 41..99
e-value: 3.0E-11
score: 43.6
IPR009071High mobility group box domainPROSITEPS50118HMG_BOX_2coord: 37..105
score: 11.986434
IPR009071High mobility group box domainPROSITEPS50118HMG_BOX_2coord: 422..490
score: 14.987191
IPR036910High mobility group box domain superfamilyGENE3D1.10.30.10High mobility group box domaincoord: 26..108
e-value: 1.8E-12
score: 49.4
coord: 409..502
e-value: 1.0E-19
score: 72.7
IPR036910High mobility group box domain superfamilySUPERFAMILY47095HMG-boxcoord: 37..98
IPR036910High mobility group box domain superfamilySUPERFAMILY47095HMG-boxcoord: 411..483
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 209..250
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 314..330
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..34
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 273..402
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 343..393
NoneNo IPR availablePANTHERPTHR46040HIGH MOBILITY GROUP PROTEIN 2coord: 35..97
coord: 358..486
NoneNo IPR availableCDDcd00084HMG-boxcoord: 41..98
e-value: 1.72842E-12
score: 60.3251
NoneNo IPR availableCDDcd00084HMG-boxcoord: 422..483
e-value: 9.00822E-18
score: 75.3479

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig177contigP-littoralis_Contig177:289371..296577 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig177.56.1mRNA_P-littoralis_Contig177.56.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig177 289326..297932 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig177.56.1 ID=prot_P-littoralis_Contig177.56.1|Name=mRNA_P-littoralis_Contig177.56.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=516bp
MDTTAQAKNNESGLGAAQKPHPLSPRPTLYPTTPLRNGVSLSPFALFSEE
KKGWLSAASPALSFEELARILAEEWERLPEEQKTPYRNKADEERLRHETM
GAAIALTQIGTPSLRSGPSTPAAIGQKARRCLDIGTPDWQSPRIQPQRVA
GNYDFGYNDSTATVDDGDFAPGLGEIIPADQASLGADCSNITDMMSSYSS
SSAPWASSSSATPCSSSSSRPPPPEPSSSGVIRRRADEVGPAVGGGDARH
RVMASPGFAAASSAVAAAATSGDGRGGDAGVAPAPATPGSGGDKSYGAGS
VRAVGFEIRAADGGGSASKRDGDIIRSRKPHTTRAPRGRPRKGAGTTTSS
SGKKRKPPSSSCSSSSSSSSKRVPPSSSSSAAAVAAVAAQNDSRSQERFR
KAEYQAGRELVSKMSKKDAARPKGPQSSYILFYKEKVASFKAAKPGMSTT
ELGAAVGEAWRGLSDEQRLPYTQRAKASRERYKGQLCTIARNAVAAASAD
SAPAAARAVSTADNH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009071HMG_box_dom
IPR036910HMG_box_dom_sf