mRNA_P-littoralis_Contig174.122.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig174.122.1 vs. uniprot
Match: D7FM56_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM56_ECTSI) HSP 1 Score: 148 bits (374), Expect = 9.370e-42 Identity = 111/143 (77.62%), Postives = 116/143 (81.12%), Query Frame = 1
Query: 1 PSWTATFRSSRSQP-ASTPAAATSSLSQPSGATCVVFGTFGACGAHMVYPVRGITSLSALREGSEEEGGGDHDTREVSGGSPAADEIRTVQXXXXXXXXXXXXXXXXXXXXXXXXXDVEAAIAGGSGYLGMNDPEALLKKEDR 426
PSWTATFRSSRSQP ASTPAAAT SLSQPSG C VFG CGA YPV G+TSLSA+ EG EEEGGGDH RE + GSPAADEIR VQXXXXXXXXXXXXXXXXXXXXXXX +EAAIAGGS YLGM DPEALLK+ R
Sbjct: 23 PSWTATFRSSRSQPPASTPAAATFSLSQPSGPICPVFGACDTCGAQFFYPVPGMTSLSAMSEGGEEEGGGDHHAREAADGSPAADEIRAVQXXXXXXXXXXXXXXXXXXXXXXXTDGIEAAIAGGSRYLGMTDPEALLKQLGR 165
BLAST of mRNA_P-littoralis_Contig174.122.1 vs. uniprot
Match: D7G3Q8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Q8_ECTSI) HSP 1 Score: 134 bits (336), Expect = 1.420e-36 Identity = 120/152 (78.95%), Postives = 129/152 (84.87%), Query Frame = 1
Query: 136 MVYPVRGITSLSALREGSEEEGGGDHDTREVSGGSPAADEIRTVQXXXXXXXXXXXXXXXXXXXXXXXXXDVEAA-IAGGSGYLGMNDPEALLKKEDRXXXXXXXXXXXXXXXXXKKGQLRELFLKKKDRLSRIEQLRANNAPAGTEASYYV 588
MVYPVRGITSLSAL EG+EE+GGGDHDTRE +GGSPAADEIR VQXXXXXXXXXXXXXXXXXXXXXX DVEAA IAGGSGYLGM DPEALLK+++R XXXXXXXXXXXXXXX+ L K+ RL IEQ RANNAPAGTEAS+YV
Sbjct: 1 MVYPVRGITSLSALSEGNEEDGGGDHDTREAAGGSPAADEIRAVQXXXXXXXXXXXXXXXXXXXXXXKIDDVEAATIAGGSGYLGMTDPEALLKEKERLGXXXXXXXXXXXXXXXQ-------VLVKEKRLFSIEQRRANNAPAGTEASHYV 145
BLAST of mRNA_P-littoralis_Contig174.122.1 vs. uniprot
Match: D7G8Q1_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8Q1_ECTSI) HSP 1 Score: 108 bits (270), Expect = 6.490e-26 Identity = 83/141 (58.87%), Postives = 91/141 (64.54%), Query Frame = 1
Query: 157 ITSLSALREGSEEEGGGDHDTREVSGGSPAADEIRTVQXXXXXXXXXXXXXXXXXXXXXXXXXDVEAAIAGGSGYLGMNDPEALLKKEDRXXXXXXXXXXXXXXXXXKKGQL--RELFLKKKDRLSRIEQLRANNAPAGTE 573
+TSLSA+ EG EEEGGGDHD RE + PAADEIR VQ X D+EAAIAGGS YLGM DPEALLK+ R XXXXXXXXXXXXX +L EL LKK+DR SRIEQLRANNAPA +
Sbjct: 1 MTSLSAMSEGDEEEGGGDHDAREAADRIPAADEIRAVQDDIRGVERKXEDAEKETAEVVKKIDDIEAAIAGGSRYLGMTDPEALLKQLGRKEEQXXXXXXXXXXXXXXXRELLLNELLLKKEDRFSRIEQLRANNAPAANK 141
BLAST of mRNA_P-littoralis_Contig174.122.1 vs. uniprot
Match: D7G515_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G515_ECTSI) HSP 1 Score: 105 bits (263), Expect = 1.310e-25 Identity = 93/144 (64.58%), Postives = 100/144 (69.44%), Query Frame = 1
Query: 157 ITSLSALREGSEEEGGGDHDTREVSGGSPAADEIRTVQXXXXXXXXXXXXXXXXXXXXXXXXXDV-------EAAIAGGSGYLGMNDPEALLKKEDRXXXXXXXXXXXXXXXXXKKGQLRELFLKKKDRLSRIEQLRANNAPAG 567
+TS SA+ EG EEEGGGDHD RE + GSPAADEIR VQXXXXXXXXXXXXXXXXXXX +V EAAIAGGS YLGM DPEALLK+ R XXXXX + LKK+DRLSRIEQLRANNAPAG
Sbjct: 1 MTSSSAMSEGDEEEGGGDHDAREAADGSPAADEIRAVQXXXXXXXXXXXXXXXXXXXAEEETAEVVKKIDYIEAAIAGGSKYLGMTDPEALLKQLGRKEEQLRRKEGKEXXXXXXXXXXXXILLKKEDRLSRIEQLRANNAPAG 144
BLAST of mRNA_P-littoralis_Contig174.122.1 vs. uniprot
Match: D8LPP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPP1_ECTSI) HSP 1 Score: 105 bits (262), Expect = 2.370e-25 Identity = 82/150 (54.67%), Postives = 91/150 (60.67%), Query Frame = 1
Query: 136 MVYPVRGITSLSALREGSEEEGGGDHDTREVSGGSPAADEIRTVQXXXXXXXXXXXXXXXXXXXXXXXXXDVEAAIAGGSGYLGMNDPEALLKKEDRXXXXXXXXXXXXXXXXXKKGQLR-------ELFLKKKDRLSRIEQLRANNAPA 564
M YPVRG+T LSA+ EG EEEGGGDH RE + PAADEIR VQ D+EAAIAGG+ YLGM DPEALLK+ ++ XXXXXXXXXXXXXX EL LK +DRLSR EQ RANNAPA
Sbjct: 1 MFYPVRGMTGLSAMSEGDEEEGGGDHHAREAADRLPAADEIRAVQDEIRGVERKIEDAEEETAEVVKKIDDIEAAIAGGARYLGMTDPEALLKQLEQLRRXXXXXXXXXXXXXXXXXXXXXXXXXXXELLLKTEDRLSRSEQFRANNAPA 150 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig174.122.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig174.122.1 >prot_P-littoralis_Contig174.122.1 ID=prot_P-littoralis_Contig174.122.1|Name=mRNA_P-littoralis_Contig174.122.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=197bp PSWTATFRSSRSQPASTPAAATSSLSQPSGATCVVFGTFGACGAHMVYPVback to top mRNA from alignment at P-littoralis_Contig174:428100..428690+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig174.122.1 ID=mRNA_P-littoralis_Contig174.122.1|Name=mRNA_P-littoralis_Contig174.122.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=591bp|location=Sequence derived from alignment at P-littoralis_Contig174:428100..428690+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig174:428100..428690+ >mRNA_P-littoralis_Contig174.122.1 ID=mRNA_P-littoralis_Contig174.122.1|Name=mRNA_P-littoralis_Contig174.122.1|organism=Pylaiella littoralis U1_48|type=CDS|length=591bp|location=Sequence derived from alignment at P-littoralis_Contig174:428100..428690+ (Pylaiella littoralis U1_48)back to top |