prot_P-littoralis_Contig174.76.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig174.76.1
Unique Nameprot_P-littoralis_Contig174.76.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length225
Homology
BLAST of mRNA_P-littoralis_Contig174.76.1 vs. uniprot
Match: A0A6H5LB71_9PHAE (PC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB71_9PHAE)

HSP 1 Score: 193 bits (491), Expect = 1.540e-58
Identity = 127/240 (52.92%), Postives = 158/240 (65.83%), Query Frame = 0
Query:    1 MQRLGLSAKYYGY-RYLTHSLAGSSRRLSSFS-GPDHDSDVFYAAKTEARTTPAYQQATAPAIAATA-PSTNGGDQWSTPGGYGPGRMPMGQAYGPPSGGSXXXXXXDGNNSGPHTHDAANTANPY--EYVQPQPTFDMQSSTHLSPIKRVDVRSYKGRVLVDIRQFFRGPDGTTMPSKKGIALTIPQWRRLQEAMGDIDSKLRGMEEA--TTEEMNAH---------ERGEQGPGGRAP 224
            MQR G+SA+  G+   L HS   SSR+LSSFS GP+HD D + AAKTEA+ TPAYQQA A A A T    T  GD+W+ PGG  PG MPMG+AY P S          G  S      ++NT N    ++V P PTFDMQSSTHLSP+++VDVRS+KGR LVDIRQ+FRG +G  +P+KKGIALTIPQWRRLQEAM DID ++  +EE   +   ++AH         E G++GP  +AP
Sbjct:    1 MQRFGVSARRRGFPSLLIHS--SSSRKLSSFSSGPEHD-DFWTAAKTEAQATPAYQQAAANATAPTPWTPTATGDRWAQPGGPSPGTMPMGEAYKPSSSSKMY-----GGRSSSSNGRSSNTFNSDSGDFVPPPPTFDMQSSTHLSPVRQVDVRSFKGRPLVDIRQYFRGAEGQAVPTKKGIALTIPQWRRLQEAMADIDKEIFALEEQQRSLAAVDAHLLELAEQPFEVGDEGPDKQAP 232          
BLAST of mRNA_P-littoralis_Contig174.76.1 vs. uniprot
Match: D7FYS7_ECTSI (PC4 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYS7_ECTSI)

HSP 1 Score: 104 bits (260), Expect = 1.950e-25
Identity = 48/70 (68.57%), Postives = 58/70 (82.86%), Query Frame = 0
Query:  134 MQSSTHLSPIKRVDVRSYKGRVLVDIRQFFRGPDGTTMPSKKGIALTIPQWRRLQEAMGDIDSKLRGMEE 203
            MQSS HLSP+++ DVR +KGR LVDIRQ+FRG +G   P+KKGIALTIPQWRRLQEAM DID ++  +EE
Sbjct:    1 MQSSMHLSPVRQADVRLFKGRPLVDIRQYFRGAEGQAAPTKKGIALTIPQWRRLQEAMADIDKEIFALEE 70          
BLAST of mRNA_P-littoralis_Contig174.76.1 vs. uniprot
Match: A8D8C5_ARTSF (RNA polymerase II transcriptional coactivator n=1 Tax=Artemia franciscana TaxID=6661 RepID=A8D8C5_ARTSF)

HSP 1 Score: 67.8 bits (164), Expect = 3.580e-11
Identity = 28/69 (40.58%), Postives = 46/69 (66.67%), Query Frame = 0
Query:  133 DMQSSTHLSPIKRVDVRSYKGRVLVDIRQFFRGPDGTTMPSKKGIALTIPQWRRLQEAMGDIDSKLRGM 201
            D + +  L   + + VRS+KG+  VDIR+++    G  MP KKGI+L++ QW+++QEAM ++D  L+ M
Sbjct:   40 DEEPTWTLDKKRFLKVRSFKGKTFVDIREYYEDASGNLMPGKKGISLSVQQWKKVQEAMDEVDEALKNM 108          
BLAST of mRNA_P-littoralis_Contig174.76.1 vs. uniprot
Match: A0A1X7U2Q5_AMPQE (PC4 domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7U2Q5_AMPQE)

HSP 1 Score: 67.8 bits (164), Expect = 3.950e-11
Identity = 28/66 (42.42%), Postives = 46/66 (69.70%), Query Frame = 0
Query:  133 DMQSSTHLSPIKRVDVRSYKGRVLVDIRQFFRGPDGTTMPSKKGIALTIPQWRRLQEAMGDIDSKL 198
            D +    LS  + V+VR++KGR+++DIR+++   DG   P KKGI+L++ QW +L+EAM  ID ++
Sbjct:   44 DTEELIPLSAKRFVNVRTFKGRIMIDIREYYVNDDGENRPGKKGISLSVDQWEKLKEAMETIDERI 109          
BLAST of mRNA_P-littoralis_Contig174.76.1 vs. uniprot
Match: A0A7M7J9K9_VARDE (PC4 domain-containing protein n=1 Tax=Varroa destructor TaxID=109461 RepID=A0A7M7J9K9_VARDE)

HSP 1 Score: 66.6 bits (161), Expect = 7.780e-11
Identity = 28/67 (41.79%), Postives = 46/67 (68.66%), Query Frame = 0
Query:  133 DMQSSTHLSPIKRVDVRSYKGRVLVDIRQFFRGPDGTTMPSKKGIALTIPQWRRLQEAMGDIDSKLR 199
            D + +  LS +++V V  +KG++ V+IR+++   +G T P KKGIAL+I QW +L+E M DID  ++
Sbjct:   30 DAEDTFELSKMRQVSVSDFKGKLFVNIREYYEDSNGETRPGKKGIALSIDQWEKLKEHMVDIDKAIK 96          
BLAST of mRNA_P-littoralis_Contig174.76.1 vs. uniprot
Match: W5JGS1_ANODA (p31A n=6 Tax=Nyssorhynchus TaxID=44543 RepID=W5JGS1_ANODA)

HSP 1 Score: 66.6 bits (161), Expect = 9.040e-11
Identity = 34/91 (37.36%), Postives = 53/91 (58.24%), Query Frame = 0
Query:  109 SGPHTHDAANTANPYEYVQPQPTFDMQSSTHLSPIKRVDVRSYKGRVLVDIRQFFRGPDGTTMPSKKGIALTIPQWRRLQEAMGDIDSKLR 199
            SGP   +    A P E      + D      L   +++ VR +KG+V VDIR+F+   DG  MP KKGI+L++PQW++L E+  +++ KL+
Sbjct:   15 SGPEDRNPVKKAKPSEGGNKSDSTD-DGCIQLDKNRKITVRDFKGKVYVDIREFYE-KDGKQMPGKKGISLSVPQWKKLLESADEVNEKLK 103          
BLAST of mRNA_P-littoralis_Contig174.76.1 vs. uniprot
Match: A0A8C4ZD74_GADMO (Activated RNA polymerase II transcriptional coactivator p15 n=2 Tax=Gadus morhua TaxID=8049 RepID=A0A8C4ZD74_GADMO)

HSP 1 Score: 67.0 bits (162), Expect = 1.100e-10
Identity = 28/67 (41.79%), Postives = 44/67 (65.67%), Query Frame = 0
Query:  133 DMQSSTHLSPIKRVDVRSYKGRVLVDIRQFFRGPDGTTMPSKKGIALTIPQWRRLQEAMGDIDSKLR 199
            D+ S + +  ++ V VR +KG+ LVDIR+++  PDG   P KKGI+L   QW +L+E + DID  ++
Sbjct:   59 DLLSVSQIGKMRYVSVRDFKGKTLVDIREYWMNPDGEMKPGKKGISLNAEQWSQLKEQISDIDEAVK 125          
BLAST of mRNA_P-littoralis_Contig174.76.1 vs. uniprot
Match: UPI001ED87873 (activated RNA polymerase II transcriptional coactivator p15 n=1 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED87873)

HSP 1 Score: 65.9 bits (159), Expect = 1.940e-10
Identity = 29/65 (44.62%), Postives = 46/65 (70.77%), Query Frame = 0
Query:  137 STHLSPIKRVDVRSYKGRVLVDIRQFFRGPDGTTMPSKKGIALTIPQWRRLQEAMGDIDSKLRGM 201
            S HL  +K   VR+++G+V VDIR++++  DG   P KKGI+L++ QWRR++E M +ID  ++ M
Sbjct:   46 SWHLEKMKYAKVRTFQGKVYVDIREYYQS-DGKMKPGKKGISLSVDQWRRIKELMPEIDEAIKEM 109          
BLAST of mRNA_P-littoralis_Contig174.76.1 vs. uniprot
Match: A0A4S8MPS4_DENBC (Transcriptional coactivator p15 (Fragment) n=1 Tax=Dendrothele bispora (strain CBS 962.96) TaxID=1314807 RepID=A0A4S8MPS4_DENBC)

HSP 1 Score: 64.7 bits (156), Expect = 2.690e-10
Identity = 32/66 (48.48%), Postives = 42/66 (63.64%), Query Frame = 0
Query:  133 DMQSSTHLSPIKRVDVRSYKGRVLVDIRQFFRGPDGTTMPSKKGIALTIPQWRRLQEAMGDIDSKL 198
            D +    L   KR  VRS+KG +LVDIR+F+ G DG   P KKGI+LT+ QW  L+++M  ID  L
Sbjct:   15 DGEKYIDLGKKKRATVRSFKGNMLVDIREFY-GDDGNEKPGKKGISLTMEQWETLKDSMSTIDDLL 79          
BLAST of mRNA_P-littoralis_Contig174.76.1 vs. uniprot
Match: A0A8C6TGR0_9GOBI (Activated RNA polymerase II transcriptional coactivator p15 n=1 Tax=Neogobius melanostomus TaxID=47308 RepID=A0A8C6TGR0_9GOBI)

HSP 1 Score: 65.9 bits (159), Expect = 2.850e-10
Identity = 27/60 (45.00%), Postives = 41/60 (68.33%), Query Frame = 0
Query:  140 LSPIKRVDVRSYKGRVLVDIRQFFRGPDGTTMPSKKGIALTIPQWRRLQEAMGDIDSKLR 199
            +  ++ V VR +KG++LVDIR+++  PDG   P KKGI+L   QW +L+E + DID  +R
Sbjct:   64 IGKMRYVSVREFKGKILVDIREYWTNPDGEMKPGKKGISLNPEQWNQLKEQISDIDDAIR 123          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig174.76.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LB71_9PHAE1.540e-5852.92PC4 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FYS7_ECTSI1.950e-2568.57PC4 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A8D8C5_ARTSF3.580e-1140.58RNA polymerase II transcriptional coactivator n=1 ... [more]
A0A1X7U2Q5_AMPQE3.950e-1142.42PC4 domain-containing protein n=1 Tax=Amphimedon q... [more]
A0A7M7J9K9_VARDE7.780e-1141.79PC4 domain-containing protein n=1 Tax=Varroa destr... [more]
W5JGS1_ANODA9.040e-1137.36p31A n=6 Tax=Nyssorhynchus TaxID=44543 RepID=W5JGS... [more]
A0A8C4ZD74_GADMO1.100e-1041.79Activated RNA polymerase II transcriptional coacti... [more]
UPI001ED878731.940e-1044.62activated RNA polymerase II transcriptional coacti... [more]
A0A4S8MPS4_DENBC2.690e-1048.48Transcriptional coactivator p15 (Fragment) n=1 Tax... [more]
A0A8C6TGR0_9GOBI2.850e-1045.00Activated RNA polymerase II transcriptional coacti... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003173Transcriptional coactivator p15 (PC4), C-terminalPFAMPF02229PC4coord: 139..190
e-value: 7.9E-18
score: 63.8
IPR009044ssDNA-binding transcriptional regulatorGENE3D2.30.31.10Transcriptional Coactivator Pc4; Chain Acoord: 138..200
e-value: 4.3E-20
score: 73.1
IPR009044ssDNA-binding transcriptional regulatorSUPERFAMILY54447ssDNA-binding transcriptional regulator domaincoord: 139..199
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 192..224
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..75
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 192..215
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 93..127
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..127
NoneNo IPR availablePANTHERPTHR13215:SF0ACTIVATED RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR P15coord: 100..202
IPR045125RNA polymerase II transcriptional coactivator Sub1/Tcp4-likePANTHERPTHR13215RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATORcoord: 100..202

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig174contigP-littoralis_Contig174:281766..282440 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig174.76.1mRNA_P-littoralis_Contig174.76.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig174 280152..282538 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig174.76.1 ID=prot_P-littoralis_Contig174.76.1|Name=mRNA_P-littoralis_Contig174.76.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=225bp
MQRLGLSAKYYGYRYLTHSLAGSSRRLSSFSGPDHDSDVFYAAKTEARTT
PAYQQATAPAIAATAPSTNGGDQWSTPGGYGPGRMPMGQAYGPPSGGSSN
SSSSDGNNSGPHTHDAANTANPYEYVQPQPTFDMQSSTHLSPIKRVDVRS
YKGRVLVDIRQFFRGPDGTTMPSKKGIALTIPQWRRLQEAMGDIDSKLRG
MEEATTEEMNAHERGEQGPGGRAP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003173PC4_C
IPR009044ssDNA-bd_transcriptional_reg
IPR045125Sub1/Tcp4-like