mRNA_P-littoralis_Contig174.73.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig174.73.1 vs. uniprot
Match: A0A6H5JJV8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV8_9PHAE) HSP 1 Score: 135 bits (339), Expect = 2.180e-35 Identity = 67/97 (69.07%), Postives = 84/97 (86.60%), Query Frame = 1
Query: 19 ILRITSKKVMQDVDTRWSSTYAAVSRLLYLRRPIAEHKRIDSIAPLLEEKDWEVLRLVVEPLLKPFMTARKHLEASKEVTLSLVIPYIGDLWDDLEE 309
I+++ KKV+QDV+TRW STYA++ RLL LRRPI EH+RIDSI PLL+EKDWEVL+ VVEPL KPF+ ++KH EASK+VT+SLVIPYI DL D+L+E
Sbjct: 192 IVQVERKKVVQDVETRWWSTYASICRLLSLRRPITEHERIDSIPPLLKEKDWEVLQ-VVEPLSKPFILSQKHREASKDVTVSLVIPYIADLRDELDE 287
BLAST of mRNA_P-littoralis_Contig174.73.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE) HSP 1 Score: 128 bits (322), Expect = 2.280e-32 Identity = 65/97 (67.01%), Postives = 79/97 (81.44%), Query Frame = 1
Query: 19 ILRITSKKVMQDVDTRWSSTYAAVSRLLYLRRPIAEHKRIDSIAPLLEEKDWEVLRLVVEPLLKPFMTARKHLEASKEVTLSLVIPYIGDLWDDLEE 309
I+++ K V+QDV+TRW STY ++ RL+ LRRPI EH+ IDS PLL+EKDWEVL+LV E LLKPFMTA+KHLEASKEVT+ LV PYI DL D L+E
Sbjct: 148 IVQVERKNVVQDVETRWWSTYVSICRLISLRRPITEHEIIDSTPPLLKEKDWEVLQLV-ESLLKPFMTAQKHLEASKEVTVRLVSPYIADLQDGLDE 243
BLAST of mRNA_P-littoralis_Contig174.73.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE) HSP 1 Score: 105 bits (261), Expect = 3.170e-24 Identity = 52/97 (53.61%), Postives = 73/97 (75.26%), Query Frame = 1
Query: 16 GILRITSKKVMQDVDTRWSSTYAAVSRLLYLRRPIAEHKRIDSIAPLLEEKDWEVLRLVVEPLLKPFMTARKHLEASKEVTLSLVIPYIGDLWDDLE 306
GIL+++ V+QDV+TRW S++A + RLLYL + I H+ D+IAP+L E DWEVLRL+ EP+L+PFM A+K LE +K VT S+ +P IG+L + LE
Sbjct: 218 GILKLSPLSVLQDVETRWWSSWAMIERLLYLMKAIKLHESTDNIAPVLSETDWEVLRLI-EPILRPFMQAQKDLEGAKYVTGSMTVPKIGELRNGLE 313
BLAST of mRNA_P-littoralis_Contig174.73.1 vs. uniprot
Match: A0A6H5KVI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI1_9PHAE) HSP 1 Score: 98.6 bits (244), Expect = 2.990e-22 Identity = 56/97 (57.73%), Postives = 67/97 (69.07%), Query Frame = 1
Query: 19 ILRITSKKVMQDVDTRWSSTYAAVSRLLYLRRPIAEHKRIDSIAPLLEEKDWEVLRLVVEPLLKPFMTARKHLEASKEVTLSLVIPYIGDLWDDLEE 309
I+++ KKV+QDV+TRW ST + IDSI PLL EKDWEVL+LV EPLL PFMTA+KHLEASK VT+SLV YI DL D+L+E
Sbjct: 136 IVQVERKKVVQDVETRWWST----------------PREIDSIPPLLNEKDWEVLQLV-EPLLHPFMTAQKHLEASKGVTVSLVTAYIADLRDELDE 215
BLAST of mRNA_P-littoralis_Contig174.73.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI) HSP 1 Score: 95.9 bits (237), Expect = 6.270e-21 Identity = 50/97 (51.55%), Postives = 69/97 (71.13%), Query Frame = 1
Query: 16 GILRITSKKVMQDVDTRWSSTYAAVSRLLYLRRPIAEHKRIDSIAPLLEEKDWEVLRLVVEPLLKPFMTARKHLEASKEVTLSLVIPYIGDLWDDLE 306
GIL++ VMQDV+TRW ST+A V RLLYL + I H+ +D + PLL + DWEVLRL+ EP+L+PFM A+K LE ++ VT S+ I + +L + LE
Sbjct: 182 GILQMEPLSVMQDVETRWWSTWAMVVRLLYLMKAIKLHESMDEVHPLLSDTDWEVLRLI-EPILRPFMKAQKDLEGAQYVTGSMTIGKMAELREGLE 277
BLAST of mRNA_P-littoralis_Contig174.73.1 vs. uniprot
Match: UPI0007425A22 (zinc finger BED domain-containing protein 1-like n=1 Tax=Cyprinodon variegatus TaxID=28743 RepID=UPI0007425A22) HSP 1 Score: 58.5 bits (140), Expect = 7.600e-8 Identity = 35/91 (38.46%), Postives = 55/91 (60.44%), Query Frame = 1
Query: 40 KVMQDVDTRWSSTYAAVSRLLYLRRPI-AEHKRIDSIAPLLEEKDWEVLRLVVEPLLKPFMTARKHLEASKEVTLSLVIPYIGDLWDDLEE 309
K+MQ+V+TRW+STY + RL+ LR P+ A + + P+L +++E++R + LL PF A L A + V+ S VIP + L L+E
Sbjct: 241 KLMQEVETRWNSTYLMLQRLMELREPVGAALAGLQTDIPILTSEEFEIVRGCLS-LLIPFYHATVELSAEETVSASKVIPLLKVLEQSLQE 330
BLAST of mRNA_P-littoralis_Contig174.73.1 vs. uniprot
Match: UPI0018E28C9B (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Cyprinodon tularosa TaxID=77115 RepID=UPI0018E28C9B) HSP 1 Score: 57.8 bits (138), Expect = 1.590e-7 Identity = 34/91 (37.36%), Postives = 54/91 (59.34%), Query Frame = 1
Query: 40 KVMQDVDTRWSSTYAAVSRLLYLRRPI-AEHKRIDSIAPLLEEKDWEVLRLVVEPLLKPFMTARKHLEASKEVTLSLVIPYIGDLWDDLEE 309
K+MQ+V+TRW+STY + RL+ LR P+ A + + P+L +++ ++R + LL PF A L A + V+ S VIP + L L+E
Sbjct: 92 KLMQEVETRWNSTYLMLQRLMELREPVGATLAGLQTDIPILTSEEFRIVRGCLS-LLNPFYYATVELSAEETVSASKVIPLLKMLEQSLQE 181
BLAST of mRNA_P-littoralis_Contig174.73.1 vs. uniprot
Match: UPI00193C8AA0 (zinc finger BED domain-containing protein 4-like isoform X1 n=2 Tax=Nilaparvata lugens TaxID=108931 RepID=UPI00193C8AA0) HSP 1 Score: 57.4 bits (137), Expect = 2.140e-7 Identity = 36/99 (36.36%), Postives = 57/99 (57.58%), Query Frame = 1
Query: 10 TDGILRITSKKVMQDVDTRWSSTYAAVSRLLYLRRPIAEH-KRIDSIAPLLEEKDWEVLRLVVEPLLKPFMTARKHLEASKEVTLSLVIPYIGDLWDDL 303
+D + + KK++QDV TRW+STY + R L LR I + R S P++ + E+L+ VVE LL+P TA + + + +T S+ IP L ++L
Sbjct: 332 SDELRKTVDKKLIQDVPTRWNSTYDMLKRFLELRPFINDIVNRFTSAPPMILALELEILQEVVE-LLQPLQTATLEISSGQYLTSSMPIPIASRLLEEL 429
BLAST of mRNA_P-littoralis_Contig174.73.1 vs. uniprot
Match: UPI0008405D89 (zinc finger BED domain-containing protein 1-like n=1 Tax=Ceratina calcarata TaxID=156304 RepID=UPI0008405D89) HSP 1 Score: 57.4 bits (137), Expect = 2.220e-7 Identity = 32/87 (36.78%), Postives = 49/87 (56.32%), Query Frame = 1
Query: 40 KVMQDVDTRWSSTYAAVSRLLYLRRPI-AEHKRIDSIAPLLEEKDWEVLRLVVEPLLKPFMTARKHLEASKEVTLSLVIPYIGDLWD 297
K++QDV TRW STY + R + L PI A I++ P + +WE+LR + +LKP +A K + + +S++IP I L D
Sbjct: 640 KLLQDVSTRWDSTYYMIDRFVLLEEPIKATIPIINNNLPCISSSEWEILREIAV-ILKPIESATKIISDQRYPIVSILIPLISGLKD 725
BLAST of mRNA_P-littoralis_Contig174.73.1 vs. uniprot
Match: UPI00193A58C3 (E3 SUMO-protein ligase ZBED1-like n=3 Tax=Styela clava TaxID=7725 RepID=UPI00193A58C3) HSP 1 Score: 56.6 bits (135), Expect = 4.020e-7 Identity = 35/97 (36.08%), Postives = 57/97 (58.76%), Query Frame = 1
Query: 22 LRITSKKVMQDVDTRWSSTYAAVSRLLYLRRPIAE---HKRIDSI----APLLEEKDWEVLRLVVEPLLKPFMTARKHLEASKEVTLSLVIPYIGDL 291
+++TSK+++ DV TRW+STY + RL L+ PI +K I + A ++ DWE+ + ++ P+L+PF A L K V++S+ PYI L
Sbjct: 299 MKLTSKRLIMDVSTRWNSTYNMLVRLQELQWPILAILGNKNITNATKASALTIKPGDWEIFKQLI-PVLEPFAEATDLLGGEKYVSISIKNPYIKGL 394 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig174.73.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig174.73.1 >prot_P-littoralis_Contig174.73.1 ID=prot_P-littoralis_Contig174.73.1|Name=mRNA_P-littoralis_Contig174.73.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=103bp SFGTDGILRITSKKVMQDVDTRWSSTYAAVSRLLYLRRPIAEHKRIDSIAback to top mRNA from alignment at P-littoralis_Contig174:277097..277405+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig174.73.1 ID=mRNA_P-littoralis_Contig174.73.1|Name=mRNA_P-littoralis_Contig174.73.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=309bp|location=Sequence derived from alignment at P-littoralis_Contig174:277097..277405+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig174:277097..277405+ >mRNA_P-littoralis_Contig174.73.1 ID=mRNA_P-littoralis_Contig174.73.1|Name=mRNA_P-littoralis_Contig174.73.1|organism=Pylaiella littoralis U1_48|type=CDS|length=309bp|location=Sequence derived from alignment at P-littoralis_Contig174:277097..277405+ (Pylaiella littoralis U1_48)back to top |