mRNA_P-littoralis_Contig174.41.2 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig174.41.2 vs. uniprot
Match: D7FYS3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYS3_ECTSI) HSP 1 Score: 352 bits (903), Expect = 6.900e-118 Identity = 174/220 (79.09%), Postives = 188/220 (85.45%), Query Frame = 3
Query: 204 DQTTTTKTAAPAMTDVQLEGRGVISLECDWGVGIGGGLWSTGLLLAEHLSKHATLYDDVFRGKRLLELGSGTGLVGLAAARFGPPLEVVVTDLESHVDICTRNVARDAATGTQGLCSVRVEAYDWSSEVPKSLGAVPFDVILGTDVAYYEHLYAPFIQALERTAGPDTLVLLGVTRTDTGPAFFDALDKAGFVYNLVDQASHKGFGLFTVCRERPY*TPT 863
DQT T T+ + +V+L+GR E +WGVGIGGGLWSTG+LL EHL+KHA LYD VF+GKR+LELGSGTGLVGLAAARFGPPLEVV+TDLESHVDIC RNVA G QGLCSVRVEAYDWSSEVP+ LG VPFDVIL TDVAYYEHLYAPF+QALERTAG TLVLLGVTRTDTGPAFFDALDKAGFVYNLVDQASHKGFGLFTV RE+P PT
Sbjct: 3 DQTAATTTSTSEVKEVELDGRXXXXXEVNWGVGIGGGLWSTGILLTEHLAKHAALYDRVFKGKRVLELGSGTGLVGLAAARFGPPLEVVITDLESHVDICKRNVASQDDMGAQGLCSVRVEAYDWSSEVPEELGEVPFDVILATDVAYYEHLYAPFVQALERTAGQHTLVLLGVTRTDTGPAFFDALDKAGFVYNLVDQASHKGFGLFTVQREQPDERPT 222
BLAST of mRNA_P-littoralis_Contig174.41.2 vs. uniprot
Match: A0A7R9UE36_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UE36_9STRA) HSP 1 Score: 172 bits (436), Expect = 1.030e-47 Identity = 91/199 (45.73%), Postives = 121/199 (60.80%), Query Frame = 3
Query: 273 ISLECDWGVGIGGGLWSTGLLLAEHLSKHATLYDDVFRGKRLLELGSGTGLVGLAAARFGPPLEVVVTDLESHVDICTRNVARDAATGTQGLCSVRVEAYDWSSEVPKSLGAVPFDVILGTDVAYYEHLYAPFIQALERTAGPDTLVLLGVTRTDTGPAFFDALDKAGFVYNLV------DQASHKGFGLFTVCRERPY 851
+ LE DW VGIGGG+WS+ L H Y G+R+LELG+GTGL G AA P E+V++D+ HV + RNV ++ T TQ VRVE +DW+ E L PFDV++GTDVAY+E LY A++RT PD +V+LGVTR+DTGP+FF L K GF Y+ + + ++ FGLFTV RE +
Sbjct: 23 LQLELDWSVGIGGGVWSSAEQLVAHFEAQQETYRQTLHGRRVLELGAGTGLAGFGAALVSPLSELVLSDVGEHVTLLRRNVEQNFDTLTQSGVKVRVETFDWTVEDVGHLDG-PFDVLIGTDVAYHESLYEDVANAIDRTLKPDGVVILGVTRSDTGPSFFRELVKRGFNYHRIRDEDMGGKHTNSSFGLFTVWREAEF 220
BLAST of mRNA_P-littoralis_Contig174.41.2 vs. uniprot
Match: W7U3Q4_9STRA (Nicotinamide N-methyltransferase, putative n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U3Q4_9STRA) HSP 1 Score: 169 bits (429), Expect = 3.250e-46 Identity = 91/206 (44.17%), Postives = 127/206 (61.65%), Query Frame = 3
Query: 273 ISLECDWGVGIGGGLWSTGLLLAEHLSKHATLYDDVFRGKRLLELGSGTGLVGLAAARFG--PPLEVVVTDLESHVDICTRNVARDAATGTQGLCSVRVEAYDWSSEVP--------KSLGAVPFDVILGTDVAYYEHLYAPFIQALERTAGPDTLVLLGVTRTDTGPAFFDALDKAGFVYNLVDQASHK-------GFGLFTVCR 839
++LE W VGIGGG+W+TGLLL E+ ++AT + V GKR++E+GSGTGLV L+ A P E+VVTD + H+D+ RN+ + A + +RV+ ++W + K+L A+PFDV++GTDVAY + LY P + AL R +GP +L+LLGVTRTDT P FF L + GF Y L A + GF L +V R
Sbjct: 56 LTLETQWNVGIGGGIWTTGLLLCEYFGRNATFFSKVLYGKRIIEIGSGTGLVALSLATNALFKPQEIVVTDQKDHLDLIERNICANIA---KMKAPIRVQEFNWLKDKETKNTDSKVKALCALPFDVVVGTDVAYCQELYGPVVHALCRLSGPHSLILLGVTRTDTNPRFFQLLQEEGFDYCLTPVADGESSCTVAGGFALLSVVR 258
BLAST of mRNA_P-littoralis_Contig174.41.2 vs. uniprot
Match: A0A835Z9W6_9STRA (Putative methyltransferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9W6_9STRA) HSP 1 Score: 167 bits (423), Expect = 8.260e-46 Identity = 83/198 (41.92%), Postives = 117/198 (59.09%), Query Frame = 3
Query: 273 ISLECDWGVGIGGGLWSTGLLLAEHLSKHATLYDDVFRGKRLLELGSGTGLVGLAAARFGPPLEVVVTDLESHVDICTRNVARDAATGTQGLCSVRVEAYDWSS-EVPKSL-------GAVPFDVILGTDVAYYEHLYAPFIQALERTAGPDTLVLLGVTRTDTGPAFFDALDKAGF-VYNLVDQASHKGFGLFTVCR 839
+S++CDWGVGIGG LWS +L+ ++ + L+ + G R+LELG+GTG++ LA+A P +++TD SH+DIC NV R++ + A+ W VP + GA FDV+LG D+AY+ HLY P I AL GP T+V LGVT+ DT P FF LD+AGF Y++ A F +FT+ R
Sbjct: 27 LSIKCDWGVGIGGHLWSCAMLMIRYMQQERELFSRILDGARVLELGAGTGMLSLASAALYDPRSIIITDQLSHIDICQHNVDRNSHNMFNKSLEIEARAFSWGDGNVPALISSDSAERGAASFDVVLGADLAYFSHLYQPLIAALVDVVGPKTVVFLGVTKADTDPTFFRLLDEAGFRFYDMSSGADTANFTIFTIFR 224
BLAST of mRNA_P-littoralis_Contig174.41.2 vs. uniprot
Match: A0A1V9ZGF1_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZGF1_9STRA) HSP 1 Score: 153 bits (386), Expect = 1.560e-40 Identity = 88/196 (44.90%), Postives = 115/196 (58.67%), Query Frame = 3
Query: 270 VISLECDWGVGIGGGLWSTGLLLAEHLSKHATLYDDVFRGKRLLELGSGTGLVGLAAARFGPPLEVVVTDLESHVDICTRNVARDAATGTQGLCSVRVEAYDWSSEVPKSLGAVPFDVILGTDVAYYEHLYAPFIQALERTAGPDTLVLLGVTRTDTGPAFFDALDKAGFVYNLVDQA------SHKGFGLFTVCR 839
++ L CDWGVGIGG LW++G L+ ++ S+H + G R+LELGSGTGLVGLA A GP V +TDL SHV NVAR+A ++ V A DW++ P P D I+GTD+AY YAP + L+R AGP+T +L+G+ R DT FF L AGF Y VD++ K FGLF + R
Sbjct: 21 IVELGCDWGVGIGGSLWTSGRLMVDYFSRHEPARRQL-AGARVLELGSGTGLVGLAVALMGPA-HVALTDLASHVAALEANVARNADR-IPAETTITVSALDWNAPPPTP--DAPLDWIVGTDIAYSPAFYAPLLATLQRLAGPNTRILVGLGRHDTDRRFFQLLHDAGFSYYKVDESLMSQEFHGKDFGLFEIRR 211
BLAST of mRNA_P-littoralis_Contig174.41.2 vs. uniprot
Match: A0A7S1U640_9STRA (Hypothetical protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U640_9STRA) HSP 1 Score: 152 bits (384), Expect = 5.750e-40 Identity = 85/197 (43.15%), Postives = 117/197 (59.39%), Query Frame = 3
Query: 273 ISLECDWGVGIGGGLWSTGLLLAEHLSKHATLYDDVFRGKRLLELGSGTGLVGLAAARF-GPPLEVVVTDLESHVDICTRNVARDAATGTQGLCSVRVEAYDWS-SEVPKSLGAVPFDVILGTDVAYYEHLYAPFIQALERTAGPDTLVLLGVTRTDTGPAFFDALDKAGFVYNLVDQASHKG------FGLFTVCR 839
I L +W VGIGGG+WS H+ H Y+ +RG+R++ELG+GTGL G AAA G EVV+TD+ HV++ N+ +A SVRVE +DW+ ++ + LG FDV++GTDVAY+E LY A++ T D +V+LGVTR DTGP+FF A + GF Y+ VD++ G F LF R
Sbjct: 38 IQLTTNWDVGIGGGVWSAAEQFLGHVGAHRDFYEQKWRGRRVIELGAGTGLAGFAAALVAGAGAEVVLTDIGEHVEMLRENLKLNAQLMEASGASVRVEEFDWAKADEVEHLGG-KFDVVVGTDVAYHEDLYDDVAAAIDATTKDDGVVVLGVTRLDTGPSFFRAFEARGFTYHRVDESLMGGAHTKSSFALFLAWR 233
BLAST of mRNA_P-littoralis_Contig174.41.2 vs. uniprot
Match: A0A5D6YE76_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YE76_9STRA) HSP 1 Score: 152 bits (383), Expect = 1.400e-39 Identity = 94/201 (46.77%), Postives = 114/201 (56.72%), Query Frame = 3
Query: 285 CDWGVGIGGGLWSTGLLLAEHLSKHATLYDDVFRGKRLLELGSGTGLVGLAAARFGPPLEVVVTDLESHVDICTRNVARDAATGTQGLCSVRVEAYDWSSEVPK-----SLG-----AVPFDVILGTDVAYYEHLYAPFIQALERTAGPDTLVLLGVTRTDTGPAFFDALDKAGFVYNLV-DQASH-----KGFGLFTVCR 839
CDW VGIGG +W++G +LA HL +HA Y +F GK +LELGSGTG VGL A P V++TDL +HV RNVA +AA VRV W S + SLG DVI+GTDVAY LY P + +L R AG TLVLLG+ R DT AFF L++ GF Y V D+ H K FGLF + R
Sbjct: 35 CDWDVGIGGSVWTSGQVLAGHLQQHADKYRPLFAGKCVLELGSGTGFVGLMTAVCFAPARVLLTDLATHVASLERNVALNAALLPPST-RVRVAELSWGSAEQEDALLASLGDGADTVDTVDVIIGTDVAYLHELYEPLLHSLRRLAGEQTLVLLGLNRADTDTAFFTRLEQDGFEYYKVPDEQLHRDYHGKDFGLFEIRR 234
BLAST of mRNA_P-littoralis_Contig174.41.2 vs. uniprot
Match: A0A1V9ZYN4_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZYN4_9STRA) HSP 1 Score: 148 bits (374), Expect = 7.450e-39 Identity = 87/195 (44.62%), Postives = 115/195 (58.97%), Query Frame = 3
Query: 273 ISLECDWGVGIGGGLWSTGLLLAEHLSKHATLYDDVFRGKRLLELGSGTGLVGLAAARFGPPLEVVVTDLESHVDICTRNVARDAATGTQGLCSVRVEAYDWSSEVPKSLGAVPFDVILGTDVAYYEHLYAPFIQALERTAGPDTLVLLGVTRTDTGPAFFDALDKAGFVYNLVDQA------SHKGFGLFTVCR 839
I LEC+W VGIGG LW++G LL ++LS++ + ++ G R+LELGSGTGLVGLA A FGP VV+TDLE+HV NV R+A +V VEA DW++ PK++G F+ I+GTD+AY Y P + L T + LG+ R DT FF L AGF Y + +A K FGLF + R
Sbjct: 14 IELECNWDVGIGGSLWTSGRLLVDYLSRNGVVRQEI-EGTRVLELGSGTGLVGLAVALFGPA-SVVLTDLETHVAALENNVKRNAGR-IPSRTNVTVEALDWNA--PKNVGDGVFEWIVGTDIAYSRSFYVPLLNTLTLFGTKKTKIQLGLGRDDTEMQFFKMLQDAGFEYYKISEAFVASEFHGKDFGLFEIRR 203
BLAST of mRNA_P-littoralis_Contig174.41.2 vs. uniprot
Match: A0A067CH82_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CH82_SAPPC) HSP 1 Score: 148 bits (374), Expect = 9.120e-39 Identity = 87/196 (44.39%), Postives = 117/196 (59.69%), Query Frame = 3
Query: 270 VISLECDWGVGIGGGLWSTGLLLAEHLSKHATLYDDVFRGKRLLELGSGTGLVGLAAARFGPPLEVVVTDLESHVDICTRNVARDAATGTQGLCSVRVEAYDWSSEVPKSLGAVPFDVILGTDVAYYEHLYAPFIQALERTAGPDTLVLLGVTRTDTGPAFFDALDKAGFVYNLV------DQASHKGFGLFTVCR 839
V+ L C+WGVGIGG LW++G L+ ++ S++ + +G +LELGSGTGLVGLA A GP VV+TDLESHV NV R++A + G V V A DW++ A P D I+GTD+AY YAP ++ L+ AGP+T +L+G+ R DT FF L AGF Y V ++ K FGLF + R
Sbjct: 21 VVELGCNWGVGIGGSLWTSGRLMVDYFSRNVRARQQL-QGASVLELGSGTGLVGLALACMGPA-SVVLTDLESHVAALQANVERNSARFSDGTL-VSVAALDWNTASADDATA-PLDWIVGTDIAYMPEFYAPLLKTLQLLAGPNTRILVGLGRHDTDMRFFRLLQDAGFSYYKVSDELVSEEFRGKDFGLFEIQR 212
BLAST of mRNA_P-littoralis_Contig174.41.2 vs. uniprot
Match: A0A2D4BZQ6_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BZQ6_PYTIN) HSP 1 Score: 149 bits (375), Expect = 1.550e-38 Identity = 84/202 (41.58%), Postives = 116/202 (57.43%), Query Frame = 3
Query: 273 ISLECDWGVGIGGGLWSTGLLLAEHLSKHATLYDDVFRGKRLLELGSGTGLVGLAAARFGPPLEVVVTDLESHVDICTRNVARDAATGTQGLCSVRVEAYDWSSEVPK-----SLGAVP--FDVILGTDVAYYEHLYAPFIQALERTAGPDTLVLLGVTRTDTGPAFFDALDKAGF-VYNLVDQA---SHKG--FGLFTVCR 839
++ +CDW VGIGG +W++G +L HL H Y ++F+GK ++ELGSGTG VGL AA P +VV+TDL SH+D RN+ + T Q VR W + + SLG D++LGTD+AY Y P + L R +TLVL+G+ R+DTG FF L++ GF Y L D+ H+G FGLF + R
Sbjct: 34 LAFQCDWDVGIGGSVWTSGEILTAHLEMHQEQYREIFQGKSVVELGSGTGYVGLLAAACFQPAQVVLTDLASHLDCMQRNIDGNR-TAVQPGVHVRAAELCWGCDAHEDALLASLGVTGRGVDIVLGTDIAYLTEFYEPILHTLRRITHSETLVLIGLNRSDTGMQFFRRLEQEGFEYYKLSDRQLPREHRGKDFGLFQIRR 234 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig174.41.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig174.41.2 >prot_P-littoralis_Contig174.41.2 ID=prot_P-littoralis_Contig174.41.2|Name=mRNA_P-littoralis_Contig174.41.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=229bp MSHEQGSTVPAVDQTTTTKTAAPAMTDVQLEGRGVISLECDWGVGIGGGLback to top mRNA from alignment at P-littoralis_Contig174:194127..197877+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig174.41.2 ID=mRNA_P-littoralis_Contig174.41.2|Name=mRNA_P-littoralis_Contig174.41.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=3751bp|location=Sequence derived from alignment at P-littoralis_Contig174:194127..197877+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig174:194127..197877+ >mRNA_P-littoralis_Contig174.41.2 ID=mRNA_P-littoralis_Contig174.41.2|Name=mRNA_P-littoralis_Contig174.41.2|organism=Pylaiella littoralis U1_48|type=CDS|length=687bp|location=Sequence derived from alignment at P-littoralis_Contig174:194127..197877+ (Pylaiella littoralis U1_48)back to top |