mRNA_P-littoralis_Contig171.82.2 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig171.82.2 vs. uniprot
Match: D7G1X2_ECTSI (Hypothetical inner membrane leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1X2_ECTSI) HSP 1 Score: 475 bits (1222), Expect = 8.650e-155 Identity = 259/412 (62.86%), Postives = 284/412 (68.93%), Query Frame = 2
Query: 332 MVTTRRKGGNGGSIDEAPEAVHGSGGRSK---------EQESEEAVDMLVDNEDVKAYIRNCRAYDVPVDPSVVVSLKTEWEVLQPTMAFSEGSMLPLAGVLDSNKHVKKLRLRGTGSTRRRAVAGGGNSNARVLRHILSRNDTVELLDMSNTGLDADGMRELCTALKENSSLTDLNLSRNRFGEEGAALLEGTLDSAPALTSLDVRSNALGYTSIAKMQRRCCCRPAGCRELSIEVDGNFVFEE----------------------------GKSTEHFWGCAIFSASLMFLYLASTLFHSFFMLPHVSGLFCVADHCAIYILIAGSYTPFMLISMHGSALGVTVIISQWLCALFGCMFSITSYYMKIKNTVYVELTLYLGLGLSVLLVWDAVLEQMHQGELLLIAGGGMA 1456
MVTTR KG DE VH S D L DNE VK YIRNCRAYDVPVDPSVV+SLKTEW+VLQPT F GSMLPLAGVLD+NKHVKKLRLRGTGST+RR VAGGGNSNAR+L IL++NDT+E LD+SNTGLDADGMRELC AL+ LGY SIAK+QRRCCCRP+GCREL++EVDGNFVFEE GKS EHFWGCAIFSASLMFLYLASTL+HSFFMLP+VSGL C+ADHCAIYILIAGSYTPFMLISMHGS+LG TVII+QWLCALFGC+FS+TSY + K T+YVELTLYLGLGLSVLLVWD+VLE MHQGEL+LIAG G A
Sbjct: 1 MVTTRAKGDAEAINDEVTALVHNGXXXXXXXXXXXXXCRSSSSSGADPLDDNEAVKTYIRNCRAYDVPVDPSVVISLKTEWDVLQPTRGFGAGSMLPLAGVLDTNKHVKKLRLRGTGSTQRRPVAGGGNSNARILGRILAQNDTIEHLDLSNTGLDADGMRELCAALEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGYKSIAKIQRRCCCRPSGCRELAVEVDGNFVFEEVLNAGTHGVGFVAAIIGAFLLMTEASQEGKSPEHFWGCAIFSASLMFLYLASTLYHSFFMLPYVSGLLCIADHCAIYILIAGSYTPFMLISMHGSSLGRTVIIAQWLCALFGCLFSMTSYSLDFKGTMYVELTLYLGLGLSVLLVWDSVLEHMHQGELMLIAGYGGA 412
BLAST of mRNA_P-littoralis_Contig171.82.2 vs. uniprot
Match: A0A835ZJF6_9STRA (Inner membrane leucine rich repeat protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJF6_9STRA) HSP 1 Score: 347 bits (891), Expect = 8.150e-106 Identity = 185/400 (46.25%), Postives = 246/400 (61.50%), Query Frame = 2
Query: 458 NEDVKAYIRNCRAYDVPVDPSVVVSLKTEWEVLQPTMAFSEGSMLPLAGVLDSNKHVKKLRLRGTGSTRRRAVAGGGNSNARVLRHILSRNDTVELLDMSNTGLDADGMRELCTALKENSSLTDLNLSRNRFGEEGAALLEGTLDSAPALTSLDVRSNALGYTSIAKMQRRCCCRPAGCRELSIEVDGNFVFEE----------------------------GKSTEHFWGCAIFSASLMFLYLASTLFHSFFMLPHVSGLFCVADHCAIYILIAGSYTPFMLISMHGSALGVTVIISQWLCALFGCMFSITSYYMKIKNTVYVELTLYLGLGLSVLLVWDAVLEQMHQGELLLIAGGGMAYVGGVIFFILGEKVPAFHIVWHVFVMVASSLHWFAVYNY 1573
N DV +YIRNCR Y VPVDPSVV+SLKT W ++QPT +F EG+MLPLAG+LD+N+H++ L L G G R+ +AG GNSNARVLR +L RN V LLD+SNTGLD DG+ E+ L E+ + SI +Q++C R GC +++ DGN+VFEE +S FW CA+FS SLM LYL+STLFHSFF++PHV+ + +ADH AIY+LIAGSYTPF++I +HGS +G V++ +W+ AL G +FSI S +K +T+ VELTLYLG+GL+VL +W V L L+ GGG AYV GV+FF++GE +P +H+ WH+FV+VAS +HWFA+Y Y
Sbjct: 28 NADVDSYIRNCRKYQVPVDPSVVISLKTRWHIMQPTRSFCEGAMLPLAGILDTNEHIRSLVLHGAGMHNRKPMAGNGNSNARVLRTMLRRNKAVSLLDLSNTGLDNDGVAEVSQILAESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFRSINALQQKCLHRRCGCA-ITVHADGNYVFEEVLNSLSHALGFIMSIIGTILLMSEASGPERSPVQFWACAVFSTSLMILYLSSTLFHSFFVVPHVAYILQIADHVAIYLLIAGSYTPFLMIGLHGSTIGGVVVVVEWVAALVGSIFSI-SCDLKSSSTMVVELTLYLGMGLAVLTMWTEVAAAFVPQCLYLLVGGGAAYVVGVVFFVIGETIPIYHVFWHLFVIVASCMHWFAIYLY 425
BLAST of mRNA_P-littoralis_Contig171.82.2 vs. uniprot
Match: K8YVT8_NANGC (Hemolysin iii n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YVT8_NANGC) HSP 1 Score: 308 bits (790), Expect = 2.990e-90 Identity = 174/456 (38.16%), Postives = 250/456 (54.82%), Query Frame = 2
Query: 464 DVKAYIRNCRAYDVPVDPSVVVSLKTEWEVLQPTMAFSEGSMLPLAGVLDSNKHVKKLRLRGTGSTRRRAVAGGGNSNARVLRHILSRNDTVELLDMSNTGLDADGMRELCTALKENSSLTDLNLSRNRFGEEGAALLEGTLDSAPALTSLDVRSNALGYTSIAKMQRRCCCRPAGCRELSIEVDG------------------------------------------------------NFVFEE----------------------------GKSTEHFWGCAIFSASLMFLYLASTLFHSFFMLPHVSGLFCVADHCAIYILIAGSYTPFMLISMHGSALGVTVIISQWLCALFGCMFSITSYYMKIKN--TVYVELTLYLGLGLSVLLVWDAVLEQMHQGELLLIAGGGMAYVGGVIFFILGEKVPAFHIVWHVFVMVASSLHWFAVYNYTV 1579
D YI NC Y++ +DPSVV++L+T W +QPT +F EGS+LPLAG+LD NK +++L L G G T +A AG G+SNAR+L +L ND++ +LD+SNTG+D G+ E+C + NS++T LN++RN F +GA +LE L L LDV NALG+ I ++Q CC A R + + V+G N+VFEE G + H+W C +FS SLM LY++S+L+HSFFMLPH + + DH IY+LIAGSY+P M+I++H S +++ +WL A G SI S + + N T VE+ ++LG+G + +WD ++ + L L+ GGGMAY+ GV+FFILGE P +H+VWH+FVM+ S LHW VY++ V
Sbjct: 62 DTAQYIINCLHYNMAIDPSVVITLRTRWATMQPTKSFCEGSLLPLAGILDRNKFIRRLHLSGAGVTNVKATAGNGDSNARILHQVLLSNDSINILDISNTGIDDSGLAEVCQGMAVNSAVTTLNVARNCFSAQGALMLEDMLQKNTRLKYLDVSRNALGFKCINRLQ---CC--AKLRNVEMRVEGKSCWTASERGRLRSDRACTAERLSWVDNGLELACALARLFRDHMHGADEPAPKCNYVFEEILNSLTHGLGFIASVVGTLLLMSAASAPGTTPYHWWSCLLFSLSLMMLYISSSLYHSFFMLPHAKDVLQILDHVGIYLLIAGSYSPIMMIALHHSHRANLLLLLEWLTAFGGICVSIASSGVGVSNQATNLVEVFIFLGMGCAAFGIWDDLVANLPATALYLLVGGGMAYIIGVVFFILGEIKPIYHMVWHMFVMLGSLLHWLCVYHFVV 512
BLAST of mRNA_P-littoralis_Contig171.82.2 vs. uniprot
Match: A0A6V1P304_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P304_HETAK) HSP 1 Score: 271 bits (694), Expect = 1.180e-77 Identity = 165/434 (38.02%), Postives = 234/434 (53.92%), Query Frame = 2
Query: 401 SGGRSKEQESEEAVDML-------------VDNEDVKAYIRNCRAYDVPVDPSVVVSLKTEWEVLQPTMAFSEGSMLPLAGVLDSNKHVKKLRLRGTGS-TRRRAVAGGGNSNARVLRHILSRNDTVELLDMSNTGLDADGMRELCTALKENSSLTDLNLSRNRFGEEGAALLEGTLDSAPALTSLDVRSNALGYTSIAKMQRRCCCRPAGCRELSIEVDGNFVFEE----------------GKST-----------EHFWGCAIFSASLMFLYLASTLFHSFFMLPHVSGLFCVADHCAIYILIAGSYTPFMLISMHGSALGVTVIISQWLCALFGCMFSITSYYMKIKNTVYVELTLYLGLGLSVLLVWDAVLEQMHQGELLLIAGGGMAYVGGVIFFILGEKVPAFHIVWHVFVMVASSLHWFAVYNYTV 1579
S +S E+EE D+L +D D+ YI NC+ + V VDPSVV++LKT W VL+PT AF EGSMLPL +L +N +KKL L G G + A NAR+L IL +N T+ L++S TGLD DG+ E+C L N ++ LG+TS+ ++ C R R+ ++++GNFVFEE G +T H W CAI+S+ LMFLY++STL+HSFFMLP + + + DHCAIY LIAG+Y+P M+I + S V V+I +WL GC+FSI S + + + VE+T+YL +GL VL VW + + L+ GG+ Y+ G++F++L +K P FH VWH+FV++AS LHWF+VY Y +
Sbjct: 10 SSNKSSGDEAEEESDLLRTPSLHRHYKPQRIDEGDL--YIENCQRFHVNVDPSVVITLKTSWHVLKPTKAFCEGSMLPLFDILSTNTFIKKLDLEGAGMVSNSNAXXXXXXXNARILGLILRKNTTITELNLSRTGLDDDGVIEVCKGLGANPAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGFTSVHRLMSCPCNR---LRKKDMDIEGNFVFEEVLNAMSHAIGFVAAAIGAATLLGEAYATGSARHIWACAIYSSCLMFLYISSTLYHSFFMLPLTNKILKICDHCAIYTLIAGTYSPLMMIGLRHSPTAVVVVIMEWLLCFLGCVFSI-SVPLGTRLSRVVEMTVYLVMGLMVLAVWPEFKTAIPAPAVELVKWGGVVYITGILFYVLDKKKPIFHSVWHMFVLIASILHWFSVYKYVL 437
BLAST of mRNA_P-littoralis_Contig171.82.2 vs. uniprot
Match: A0A7S3MG12_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MG12_9STRA) HSP 1 Score: 249 bits (636), Expect = 2.420e-69 Identity = 152/426 (35.68%), Postives = 222/426 (52.11%), Query Frame = 2
Query: 443 DMLVDNEDVKA--------------YIRNCRAYDVPVDPSVVVSLKTEWEVLQPTMAFSEGSMLPLAGVLDSNKHVKKLRLRG-TGSTRRRAVAGGGNSNARVLRHILSRNDTVELLDMSNTGLDADGMRELCTALKENSSLTDLNLSRNRFGEEGAALLEGTLDSAPALTSLDVRSNALGYTSIAKMQRRCCCRPAGCRELSIEVDGNFVFEE----------------------------GKSTEHFWGCAIFSASLMFLYLASTLFHSFFMLPHVSGLFCVADHCAIYILIAGSYTPFMLISMHGSALGVTVIISQWLCALFGCMFSITSYYMKIKNTVYVELTLYLGLGLSVLLVWDAVLEQMHQGELLLIAGGGMAYVGGVIFFILGEKVPAFHIVWHVFVMVASSLHWFAVYNYTVQYEV 1591
+ +V+NE VKA YI NC+ ++V +DPSVV++L T W VL+P+ + EGS+LPL G+L+ N H+ K+ L T R G GNSNAR L IL + + + L++SNTGLD DG++E+C +K+ + SI + C C P + LSI GN+VFEE S+ HFW C I+S +LMFL+L+S LFHSFFM P + V DH IY++IAGS TPFML+++H +I +W+ A G +F+ S ++T+ VELT+++ +G LLVW+ +L+++ + L+ G YV G+ FFILGE P +H VWH+FV+VA++LHWF VY + V ++
Sbjct: 5 EKVVENEPVKADAKALEQYAREAENYISNCKKFEVDIDPSVVIALSTGWNVLKPSKSTREGSLLPLIGILEDNTHITKINLADVTMQDGRYRSVGNGNSNARALVSILHKTNVITELNLSNTGLDDDGIKEICDGIKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGSIHSLL--CLCGPN--KSLSILTSGNYVFEEILNSVSHGLAFLGAVVGANILISDAADVQGSSYHFWACVIYSFALMFLFLSSCLFHSFFMSPTTMRVLQVLDHVGIYLVIAGSMTPFMLVALHHHTAARVLICGEWIAAFLGSVFAACSDLNNPRHTM-VELTIFVLMGAGFLLVWEQLLQELSAPAMTLLILGNACYVVGIAFFILGEYKPIYHCVWHLFVVVAAALHWFCVYFFIVSVDL 425
BLAST of mRNA_P-littoralis_Contig171.82.2 vs. uniprot
Match: A0A8J2SWI0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SWI0_9STRA) HSP 1 Score: 207 bits (526), Expect = 9.840e-54 Identity = 137/399 (34.34%), Postives = 202/399 (50.63%), Query Frame = 2
Query: 464 DVKAYIRNCRAYDVPVDPSVVVSLKTEWEVLQPTMAFSEGSMLPLAGVLDSNKHVKKLRLRGTGSTRRRAVAGGGNSNARVLRHILSRNDTVELLDMSNTGLDADGMRELCTALKENSSLTDLNLSRN-RFGEEGAALLEGTLDSAPALTSLDVRSNALGYTSIAKMQRRCCCRPAGCRELSIEVDGNFVFEEGKST-EH-------------------------FWGCAIFSASLMFLYLASTLFHSFFMLPHVSGLFCVADHCAIYILIAGSYTPFMLISMHGSALGVTVIISQWLCALFGCMFSITSYYMKIKNTVYVELTLYLGLGLSVLLVWDAVLEQMHQGELLLIAGGGMAYVGGVIFFILGEKVPAFHIVWHVFVMVASSLHWFAVYNYTV 1579
DV AY+ +CRAY+V DP+ +L T W +L P++ F G +LPL VL +K + +L+LR G A +AR L IL RN ++E LD+S GLD + EL L+E SSL L L+ N FG++ A L + AP+L +DV +N+L + ++K+ + + +++E GNF EE S H FW C + A+L+ + +STL+H F P + + DH IY+LIAGSYT + + G ++ +WL A GC+FS M T ++EL + +G + L + E + + L+ GG YV GVI FIL +K P +H+VWH+FVM + HWF VY Y V
Sbjct: 27 DVAAYLNSCRAYNVTPDPATSTTLATGWWLLAPSLGFGRGGLLPLIDVLAESKSITELKLRADGERGASPAA-----DARALAEILKRNQSLETLDLSQCGLDDVSIEELAQGLRE-SSLRTLILTENYTFGDDACAALAEAVRQAPSLERIDVSNNSLYFPGVSKISTA-----SKQKNVTVESVGNFSTEEMLSALTHGLSFVVALVACIPLLTDAYQADRFTFWCCVAYEATLLVCFGSSTLYHGHFSNPKMFHFWMRVDHMGIYLLIAGSYTALISVGCRGHVPIAIIVALEWLLAGGGCLFSAAGVGMSKTETNWLELATFGVMGFACLPCIGLIKEILGTEAIFLVGLGGAFYVIGVIPFILADKHPGWHVVWHLFVMAGAVTHWFCVYLYVV 414
BLAST of mRNA_P-littoralis_Contig171.82.2 vs. uniprot
Match: A0A812M1I9_9DINO (YqfA protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812M1I9_9DINO) HSP 1 Score: 192 bits (488), Expect = 1.890e-49 Identity = 130/413 (31.48%), Postives = 201/413 (48.67%), Query Frame = 2
Query: 476 YIRNCRAYDVPVDPSVVVSLKTEWEVLQPTMAFSEGSMLPLAGVLDSNKHVKKLRLRGTGSTRRRAVAGGGNSNARVLRHILSRNDTVELLDMSNTGLDADGMRELCTALKENSSLTDLNLSRNRFGEEGAALLEGTLDS---------APALTSLDVRSNALGYTSIAKMQRRCCCRPAGCREL--------SIEVDGNFVFEE--------------------------GKSTEHFWGCAIFSASLMFLYLASTLFHSFFMLPHVSGLFCVADHCAIYILIAGSYTPFMLI----SMHGSALGVTVIISQWLCALFGCMFSITSYYMKIKNTV-YV--ELTLYLGLGLSVLLVWDAVLEQMHQGELLLIAGGGMAYVGGVIFFILGEKVPAFHIVWHVFVMVASSLHWFAV 1564
Y +CR PV+P++ V L+ LQ E +LP L + +++L R + + R G GN+NARVLR+IL RN ++E+LD+ + G+D+DG+ ++C L++N +L L+L N G +G LL +D + +L LD+ + ++G + + + + R + S+ V NF EE H WG AIF L+F + +STL+HS FM P + + V DH AIY LIA +YTPF+L MHG L ++W+ G + I S Y +V Y+ EL LYL +G + +L WD + Q+ Q + GG+ Y GV FF+L + P +H++WH+FV A+ HWF +
Sbjct: 32 YAESCRRLGFPVEPAIAVWLRLGGSCLQVPW---ESCLLPACDFLAESSSLQQLGFRASYAPR-----GTGNANARVLRYILERNTSLEVLDLGHAGIDSDGIADICKGLRQNKTLKSLSLRGNYLGPKGGQLLAEMVDELLQQAGPGGSTSLRMLDISACSIGSGCVRHLAQVTGLKSIYSRTMASSQQGAPSVNVADNFETEELWNAITHGMMFFLSLFGTGQLLYQAADSPVHHIWGIAIFGFGLLFCFGSSTLYHSLFMYPVTARVLQVLDHAAIYFLIAATYTPFLLFYSDTPMHGDLLK-----AEWILCWLGIVTHICSQYFDWGTSVPYLTGELLLYLAMGWAAVLAWDTFMAQLPQACWSWLMAGGLLYTAGVPFFVLADNRPIYHVIWHLFVAFAAICHWFVL 431
BLAST of mRNA_P-littoralis_Contig171.82.2 vs. uniprot
Match: A0A812U225_9DINO (YqfA protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812U225_9DINO) HSP 1 Score: 196 bits (499), Expect = 1.360e-47 Identity = 135/415 (32.53%), Postives = 205/415 (49.40%), Query Frame = 2
Query: 470 KAYIRNCRAYDVPVDPSVVVSLKTEWEVLQPTMAFSEGSMLPLAGVLDSNKHVKKLRLRGTGSTRRRAVAGGGNSNARVLRHILSRNDTVELLDMSNTGLDADGMRELCTALKENSSLTDLNLSRNRFGEEGAALL---------EGTLDSAPALTSLDVRSNALGYTSIAKMQRRCCCRPAGCRELS--------IEVDGNFVFEE--------------------------GKSTEHFWGCAIFSASLMFLYLASTLFHSFFMLPHVSGLFCVADHCAIYILIAGSYTPFMLI----SMHGSALGVTVIISQWLCALFGCMFSITSYYMKIKNTV-YV--ELTLYLGLGLSVLLVWDAVLEQMHQGELLLIAGGGMAYVGGVIFFILGEKVPAFHIVWHVFVMVASSLHWFAV 1564
+ Y +CR+ PV+P++ V L+ LQ E +LP L ++ +++L R + + R G GN+NARVLR+IL RN ++E+LD+ + G+D+DG+ ++C L+ N++L L L N G +G LL E + +L LDV + ++G I ++ + + R ++ + V NF EE H WG AIF L+F + +STL+HS FM P + + V DH AIY+LIAG+YTPF+L MHG L ++W+ G + I S Y +V Y+ EL LYL +G + +L WD + Q+ + GG+ Y GV FF+L E P +H+VWH+FV A+ HWFAV
Sbjct: 685 QVYAESCRSLGFPVEPAIAVWLRLGGSCLQVPC---ESCLLPACDFLAESESLRQLGFRASYAPR-----GTGNANARVLRYILERNSSLEILDLGHAGIDSDGIEDICKGLRRNTTLKSLILRGNYLGPKGGQLLVQLVAELIQEAGPGGSTSLRILDVSACSIGSGCIRQLAQVAGLKSIYSRTVASSQQGAPLVNVADNFETEELWNAITHGLMFFLSLFGMCHLLYQVADSPVHHIWGTAIFGFGLIFCFGSSTLYHSLFMYPVAARVLQVLDHAAIYLLIAGTYTPFLLFYSDTPMHGDLLK-----AEWILCWLGIVTHICSQYFDWGTSVPYLTGELLLYLAMGWAAVLAWDTFISQLPPTCWFWLMAGGLLYTAGVPFFVLAEHRPIYHVVWHLFVAFAAICHWFAV 1086
BLAST of mRNA_P-littoralis_Contig171.82.2 vs. uniprot
Match: F0YDQ2_AURAN (MBD domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDQ2_AURAN) HSP 1 Score: 197 bits (500), Expect = 2.210e-47 Identity = 125/399 (31.33%), Postives = 187/399 (46.87%), Query Frame = 2
Query: 470 KAYIRNCRAYDVPVDPSVVVSLKTEWEVLQPTMAFSEGSMLPLAGVLDSNKHVKKLRLRGTGSTRRRAVAGGGNSNARVLRHILSRNDTVELLDMSNTGLDADGMRELCTALKENSSLTDLNLSRNRFGEEGAALLEGTLDSAP-----ALTSLDVRSNALGYTSIAKMQRRCCCRPAGCRELSIEVDGNFVFEE--------------------------GKSTEHFWGCAIFSASLMFLYLASTLFHSFFMLPHVSGLFCVADHCAIYILIAGSYTPFMLISMHGSALGVTVIISQWLCALFGCMFSITSYYMKIKNTVYVELTLYLGLGLSVLLVWDAVLEQMHQGELLLIAGGGMAYVGGVIFFILGEKVPAFHIVWHVFVMVASSLHWFAVYNY 1573
+ Y+R C V DPSV+ +L T W L P F +G +LPL VL +K + L LR S + A ++AR L L RN +V LD+S GLD + EL AL ++++ L N FG+ G A L L + L LDV +N L Y+S K+ + I+ GN+ EE + +W C ++ +L+ + +ST +H FFM P + F DH AIY+LIAGSYTP + + G +++ W+ A GC S + ++ E+ +Y +G +VL + V + L+A GG Y+ G+ FF+ G + P +H+VWH+FVM A++ HWF VY Y
Sbjct: 46 REYLRRCAELSVQPDPSVLTTLSTRWWFLAPKTYFGDGGLLPLLDVLAESKTITSLTLR---SDPNNSTAASHAADARALAQALRRNTSVTTLDVSACGLDDLAITELAAALGSSATIKTAKLGSNAFGDAGTAALTKHLGAGKWRCSCGLQRLDVSNNGLYYSSSHKL-----ATVLSKHGVKIDAVGNYTTEEILNALTHGMGFIAALIGAIPLLYDAWHRDRTTYWACLLYQFTLLCCFGSSTAYHGFFMHPRIMLWFQRFDHAAIYLLIAGSYTPLVFLGCRGHLGAAAIVVINWIAAFCGCCISAAGIGISSEHLNPTEIIIYASMGAAVLPIIGPVKRLLAPEAFFLLALGGALYIAGIFFFVRGMRHPGWHVVWHIFVMAAAATHWFCVYLY 436
BLAST of mRNA_P-littoralis_Contig171.82.2 vs. uniprot
Match: A0A7S2XW72_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XW72_9STRA) HSP 1 Score: 167 bits (423), Expect = 4.760e-44 Identity = 84/170 (49.41%), Postives = 116/170 (68.24%), Query Frame = 2
Query: 1064 GCAIFSASLMFLYLASTLFHSFFMLPHVSGLFCVADHCAIYILIAGSYTPFMLISMHGSALGVTVIISQWLCALFGCMFSITSYYMKIKNTVYVELTLYLGLGLSVLLVWDAVLEQMHQGELLLIAGGGMAYVGGVIFFILGEKVPAFHIVWHVFVMVASSLHWFAVYNY 1573
G IFS SL+ LYL+STL+HSFFMLPH +F VADHC IYILIAGSY+PF +I++H G +II W+ A+ GC+FS++S + +T VE+ +L +GLSV VW ++ + L L+ GG AY+ G++FF +G +P +H VWHVFVM+ S HW+ VYN+
Sbjct: 1 GALIFSISLLILYLSSTLYHSFFMLPHWMYIFQVADHCGIYILIAGSYSPFCMIALHHEMAGQVLIILLWVAAMCGCLFSMSSD-LNAASTEKVEVFFFLAMGLSVGFVWGKIVSALSAEALNLLVFGGAAYIIGIVFFKIGNTIPIYHTVWHVFVMIGSGSHWYCVYNH 169 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig171.82.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig171.82.2 >prot_P-littoralis_Contig171.82.2 ID=prot_P-littoralis_Contig171.82.2|Name=mRNA_P-littoralis_Contig171.82.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=427bp MVTTRRKGGNGGSIDEAPEAVHGSGGRSKEQESEEAVDMLVDNEDVKAYIback to top mRNA from alignment at P-littoralis_Contig171:243425..257053- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig171.82.2 ID=mRNA_P-littoralis_Contig171.82.2|Name=mRNA_P-littoralis_Contig171.82.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=13629bp|location=Sequence derived from alignment at P-littoralis_Contig171:243425..257053- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig171:243425..257053- >mRNA_P-littoralis_Contig171.82.2 ID=mRNA_P-littoralis_Contig171.82.2|Name=mRNA_P-littoralis_Contig171.82.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1281bp|location=Sequence derived from alignment at P-littoralis_Contig171:243425..257053- (Pylaiella littoralis U1_48)back to top |